BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015811
         (400 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/375 (54%), Positives = 263/375 (70%), Gaps = 1/375 (0%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M P+PP +SSFN LLG +AK K Y  V+SL+KR++ IGL PD  T +ILINC+C + +V 
Sbjct: 86  MQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVD 144

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
            G  + G +LR   +PN VTFTSL+KGLC  SRI EA  L  K+   G  PNV+TY TL+
Sbjct: 145 FGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLL 204

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC TG+T++A+ L +EM NGNG  GV  KPN V Y  IID LCK+G +DK KELFL+M
Sbjct: 205 NGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM 264

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K   ++P+VV Y+S+IHG CH   W  AKGL  EMVD+GV PNVV+ NV+++ LCK GKM
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           + A+ LL LM+Q    P+ FTYNTL+DGFCL G+I+  ++LFVSMES G + D  SYN+L
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVL 384

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           INGYCK+  + EA  LY E+  K I PTV+TYNTL  GLF   +   A  LF EM+ +D+
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDL 444

Query: 364 AADTCTYRTFIDGLC 378
             ++CTY   +DGLC
Sbjct: 445 TPESCTYNILLDGLC 459



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 188/341 (55%), Gaps = 6/341 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+L  Y  +I+  CK G +  G  +F  +     +P+VV ++S+I G+C   R   A  L
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F ++   G  PNV+T+N LI+ LC+ G    A +L K M    GE      P+T TY+ +
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ-RGE-----SPDTFTYNTL 349

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG C EG +D A++LF+ M+ + +  + V+Y  LI+G+C +    EAK L  EM+ + +
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P V++ N ++  L + GK+ +A  L   M   D+ P + TYN L+DG C    ++   E
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           LF  +E+   +     +N LI+G CK +++E A  L+N L  +G++P V+TY  + HGL 
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +  Q E A  LF+ M+    A +  T+ T + G C   +++
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQ 570



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 186/376 (49%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +  ++  L K+   D    LF  +   G+ PD+  YS +I+  C  G+      +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNVVTF  LI  LC   ++ EA  L   +   G  P+  TYNTLI+G C 
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  M +   E       + V+Y+++I+G CK G + +AK+L+ +M  + +
Sbjct: 356 EGRIDDARDLFVSMESKGIET------DAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+TY +L+ G        +A  L  EM    + P   + N++++ LCKN  +  A  
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +   D +P+   +N L+DG C   KI   +ELF  +   G + +  +Y ++I+G C
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++E A  L+  +  KG  P +VT+NTL  G  +  + ++ ++L  EM   D + D  
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 369 TYRTFIDGLCVRPQVR 384
           T    +D L    + R
Sbjct: 590 TISIVVDLLSKDEKYR 605



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 165/319 (51%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+L+  L K    +    L K +   G  PD +TY+ LI+ FC  G++     +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       + V++  LI G C   R+VEA  L+ ++      P VITYNTL+ GL R
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A NLF EM   +        P + TY+I++DGLCK   + +A ELF  ++  + 
Sbjct: 426 EGKVRDAWNLFGEMKVHD------LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  +  LI G C A     A+ L   +  +G++PNV++  V+++ LCK+G+++NA  
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +    PN  T+NTLM GFC   ++ +V EL   M       D  + +I+++   
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLS 599

Query: 309 KNKEVEEALSLYNELPFKG 327
           K+++  E L L    P +G
Sbjct: 600 KDEKYREYLHLLPTFPAQG 618



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 14/314 (4%)

Query: 78  APNVVTFTSLIKGLCAESRI--VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
           AP+     + +K  C    I   EA ++F  L      P + ++NTL+  + +       
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           ++L+K M+     IG+   P+ +T +I+I+  C    VD    +  +M     +PN VT+
Sbjct: 112 ISLYKRMS----LIGLA--PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTF 165

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           TSL+ G C  +  +EA GLL +MV  G +PNVV+   ++N LC  G    A +L + M+ 
Sbjct: 166 TSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225

Query: 256 CD------VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +      ++PN   Y T++D  C  G I++ KELF+ M+  G   D  +Y+ +I+G C 
Sbjct: 226 GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
               E A  L+NE+  +G+ P VVT+N L   L +  + E A  L   M     + DT T
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345

Query: 370 YRTFIDGLCVRPQV 383
           Y T IDG C+  ++
Sbjct: 346 YNTLIDGFCLEGRI 359



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +H   P   ++NILL  L KN H    + LF  L +    P +  ++ LI+  CK  ++ 
Sbjct: 441 VHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIE 500

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   +F R+      PNV+T+T +I GLC   ++  A  LF  ++  GC PN++T+NTL+
Sbjct: 501 IARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLM 560

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
            G C+       + L +EM   +      F P+  T SI++D L K+
Sbjct: 561 RGFCQNDEMQKVVELLQEMAEKD------FSPDASTISIVVDLLSKD 601


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/378 (51%), Positives = 257/378 (67%), Gaps = 1/378 (0%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   HP PP +SSFN LLG LAK  HY  + SL+  +   GL PDL+T SIL NC C + 
Sbjct: 82  MMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVN 140

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +VS        ILR  + PNVVT+T+LIKGLC E RI EA  LF +++  GC PN +TY 
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLC+TG+  +AL L KEM N   + GV  KP  +TYSIIIDGLCK G  D+AKELF
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +MK + + P+V++Y++LIHGFC A  W+++K L  EMVDQGVQP++V+ +V+++ LCK 
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A +LL++M+Q  + PN  TYN+L+DGFC+ G +N  +ELF+SM S G + D+ SY
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LINGYCK  +V+EA++LYNE+   G  P V TY TL  GLF+  +   A KLF  M+ 
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440

Query: 361 NDVAADTCTYRTFIDGLC 378
             V+A++  Y  F+DGLC
Sbjct: 441 YGVSANSQIYGIFLDGLC 458



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 197/405 (48%), Gaps = 35/405 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L           LF R+  +G  P+  TY  LI   C+ G V++   +
Sbjct: 159 PNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKL 218

Query: 69  FGRILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              +L           P V+T++ +I GLC   R  EA  LF ++KA G  P+VI+Y+TL
Sbjct: 219 HKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTL 278

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVV-----------------------------F 153
           I+G C  G    + +LF EM +   +  +V                              
Sbjct: 279 IHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN +TY+ +IDG C  G ++ A+ELFL M  + L P+ ++YT+LI+G+C      EA  
Sbjct: 339 VPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN 398

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  EM+  G  PNV +   ++  L + GK+ +A +L  +M    V  N+  Y   +DG C
Sbjct: 399 LYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLC 458

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               +    ELF  ++S   K +  +Y+ LI+G CK  ++E A  L+ +L  +G++P VV
Sbjct: 459 KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVV 518

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN + HG  ++ Q + A  LF +M+ N    D   Y T + G C
Sbjct: 519 TYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 188/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++I++  L K    D    LF+ + + G+ PD+ +YS LI+ FC  G+      +
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++VTF+ LI  LC E ++ EA  L   +   G  PN+ITYN+LI+G C 
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M +   E      P+ ++Y+ +I+G CK   V +A  L+ +M     
Sbjct: 355 VGDLNSARELFLSMPSKGLE------PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK 408

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV TY +L+ G        +AK L   M   GV  N     + ++ LCKN  +  A  
Sbjct: 409 SPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAME 468

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + +   + + N   Y+ L+DG C  GK+    ELF  +   G + D  +YNI+I+G+C
Sbjct: 469 LFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFC 528

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V+ A  L+ ++   G  P ++ YNTL  G  E  + E  +KL  +M   DV+ +  
Sbjct: 529 KVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588

Query: 369 TYRTFIDGLC 378
           +    +D LC
Sbjct: 589 SCTIVVDMLC 598



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 172/347 (49%), Gaps = 29/347 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+        +D    LF  +   G+ PD+ T+S+LI+  CK G+V+    +
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN++T+ SLI G C    +  A  LF  + + G EP+ I+Y TLING C+
Sbjct: 330 LEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCK 389

Query: 129 TGHTIVALNLFKEMTN------------------GNGEIGVVFK-----------PNTVT 159
           T     A+NL+ EM                      G++G   K            N+  
Sbjct: 390 TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y I +DGLCK   + +A ELF ++K  N   N+  Y+ LI G C A     A  L  ++ 
Sbjct: 450 YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLS 509

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+QP+VV+ N++++  CK G++DNA+ L + M +    P+   YNTL+ GFC   K+ 
Sbjct: 510 QEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLE 569

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            V +L   M       +  S  I+++  CK+++ ++ + L  + P +
Sbjct: 570 EVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 238 CKNGKMD--NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV---SMESMG 292
           CK G +    A    DLM++    P   ++N L+ G     KIN   +LF     M   G
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGL---AKINHYSQLFSLYNEMRLAG 121

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D F+ +IL N  C    V EAL+    +  +G  P VVTY TL  GL    +   A 
Sbjct: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEAT 181

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
           +LF+ MQ      +  TY T I GLC
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLC 207



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+N L+ G  K     +  SLYNE+   G+ P + T + L + L  + +   AL     +
Sbjct: 93  SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGI 152

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
                  +  TY T I GLC+  + R + A R
Sbjct: 153 LRRGYIPNVVTYTTLIKGLCM--EHRISEATR 182


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/376 (48%), Positives = 258/376 (68%), Gaps = 1/376 (0%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           M  +P P +SSFN LL  LAK KHY  V SL+ ++   GL  D  T +IL+NC C + ++
Sbjct: 61  MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRL 120

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             GF  F  ILR  ++PN+VT+ +LIKGLC E RI EA  LF +++  GC P+V+TY TL
Sbjct: 121 REGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTL 180

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC TG+  +AL L +EM N      +  KPN +TY+II+DGLCK G  D+AK+LF +
Sbjct: 181 IKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEE 240

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK + + P++++Y SLIHGFC A  W E+K LL EM+DQG+QP++V+ NV+++ LCK GK
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A +LL +M++  + P+  TYN+L++GFC+ G +N  +ELFVSM S GC+ D  SYN+
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGY K  +VEEA+ LYNE+   G +P V+TY++L  G+F   + + A KLF  M+ + 
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420

Query: 363 VAADTCTYRTFIDGLC 378
           +A ++ TY  F+DGLC
Sbjct: 421 IAENSYTYGIFLDGLC 436



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++  L K    D    LF+ + + G+ P + +Y+ LI+ FC  G+      +
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P++VTF  LI  LC E +++EA  L   +   G  P+++TYN+LI G C 
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M +   E      P+ ++Y+++I+G  K   V++A +L+ +M     
Sbjct: 333 VGDLNSARELFVSMPSKGCE------PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY SL+ G   A   ++AK L   M   G+  N  +  + ++ LCKN  +  A +
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +   + +      N L+DG C  GK+    ELF  + + G + +  +Y I+I+G+C
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V++A  L  ++   G  P ++TYNTL  G +E  + E  ++L   M   DV+ D  
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566

Query: 369 TYRTFIDGL 377
           T    +D L
Sbjct: 567 TCSIVVDML 575



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 195/403 (48%), Gaps = 35/403 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L           LF R+  +G  PD+ TY  LI   C  G +++   +
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196

Query: 69  FGRILRSCF------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              +L           PNV+T+  ++ GLC   R  EA  LF ++K  G  P++I+YN+L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGE-------------------------IGVVFK--- 154
           I+G C  G    +  L  EM +   +                         +GV+ +   
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316

Query: 155 -PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ VTY+ +I+G C  G ++ A+ELF+ M  +   P+V++Y  LI+G+       EA  
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  EM+  G +PNV++ + ++  +   GK+D+A +L  +M    +  N++TY   +DG C
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               +    +LF  ++S   K +  + N LI+G CK  ++E A  L+ +L  +G +P VV
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 496

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           TY  + HG     Q ++A  L  +M+ N    D  TY T + G
Sbjct: 497 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 539



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 6/347 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N L+        ++    L   +   GL PD+ T+++LI+  CK G+V     +
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++ S   P++VT+ SLI+G C    +  A  LF  + + GCEP+VI+YN LING  +
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 367

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A+ L+ EM      + V  +PN +TY  ++ G+   G VD AK+LF  MK   +
Sbjct: 368 TLKVEEAMKLYNEM------LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  TY   + G C  +   EA  L  E+     +  + + N +++ LCK GK++ A  
Sbjct: 422 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + +      PN  TY  ++ GFC  G++++   L   ME+ GC  D  +YN L+ G+ 
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 541

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           ++ ++EE + L + +  K + P  +T + +   L +  + +  L L 
Sbjct: 542 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 238 CKNGKMD--NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           CK G +   +A     LM++    P+  ++N L+ G       ++V  L+  M   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  + NIL+N  C    + E  + +  +  +G  P +VTYNTL  GL    +   A +LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
           + MQ      D  TY T I GLC
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLC 185



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 39/85 (45%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+N L++G  K K   +  SLYN++   G+     T N L + L  + +       F  +
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
                + +  TY T I GLC+  ++
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRI 155


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/376 (49%), Positives = 250/376 (66%), Gaps = 1/376 (0%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           M+ +P PP+SSF  LL  LAK KHY  V  L+ ++   G+ PD  T +IL+NC C + +V
Sbjct: 88  MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRV 147

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             G  +   ILR  + P++VT+T+LIKGLC E RI +AA LFT+++  GC PN ITY TL
Sbjct: 148 GEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTL 207

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + GLCRTG+  +AL L +EM N +   G+ FKP  ++YSIIID LCK+   D+A++LF +
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK + + P V++YTSLIHGFC    W EAK L  EMV+QGVQPNVV+ NV+++ LCK GK
Sbjct: 268 MKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 327

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  LL++M+Q  + PN  TYN+L++GFCL G +N  +ELFVSM S GC+ D   Y +
Sbjct: 328 VIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTV 387

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGYCK  +VEEA+ LYN +   G +P V TY  L  GLF+  +   A KLF  M+   
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 447

Query: 363 VAADTCTYRTFIDGLC 378
           +  D   Y  F++GLC
Sbjct: 448 IPGDLYIYGIFLNGLC 463



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 198/381 (51%), Gaps = 12/381 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+  L           LF R+  +G  P+  TY  L+   C+ G +S+   +
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223

Query: 69  FGRILRSC------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              +L         F P V++++ +I  LC + R  EA  LF ++K  G  P VI+Y +L
Sbjct: 224 HQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C  G    A  LF EM N     GV  +PN VT++++ID LCKEG V +AK+L   
Sbjct: 284 IHGFCCGGKWEEAKRLFNEMVNQ----GV--QPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M    + PN++TY SLI GFC   D N A+ L + M  +G +P+V+   V++N  CK  K
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           ++ A +L + M+Q   RP+  TY  L+ G    GK+   K+LF  M+  G   D + Y I
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 457

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
            +NG CKN  + EA+ L+N+L    IK  +  +N L  GL +  + E A +LF ++   +
Sbjct: 458 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 517

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +  D  TY   I   C   QV
Sbjct: 518 LQPDVVTYNIMIHEFCRGGQV 538



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 185/363 (50%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++I++  L K++  D    LF+ +   G+ P + +Y+ LI+ FC  G+      +
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL 299

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNVVTF  LI  LC E +++EA  L   +   G  PN++TYN+LI G C 
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M +   E      P+ + Y+++I+G CK   V++A +L+  M     
Sbjct: 360 VGDLNSARELFVSMPSKGCE------PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY +L+ G        +AK L   M   G+  ++    + +N LCKNG +  A  
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + +   +++ +   +N L+DG C  GK+    ELF  +     + D  +YNI+I+ +C
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V +A  L+ ++   G  P  +TY TL  G FE ++ E+ ++L   M   DV+ D  
Sbjct: 534 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593

Query: 369 TYR 371
             R
Sbjct: 594 ILR 596



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 8/219 (3%)

Query: 168 CKEGFVD--KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           CK G +   +A + F  M Y N  P + ++T L+ G      +++   L  +M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  + N+++N LC   ++     ++  +++    P+  TY TL+ G C+  +I++   LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL----PFKGI--KPTVVTYNTLF 339
             M+ +GC  +  +Y  L+ G C+   +  AL L+ E+       GI  KP V++Y+ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             L + R+ + A  LF EM+   +     +Y + I G C
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFC 288



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  +  + I L  L KN      + LF +L S  +  D+  ++ LI+  CK G++   + 
Sbjct: 449 PGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 508

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +F ++ +    P+VVT+  +I   C   ++V+A  LF K++  GC P+ ITY TLI G
Sbjct: 509 LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+  L++G  K K   +   LYN++   GI P   T N L + L  + +    L +   +
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
                  D  TY T I GLC+  ++      FT  ++ G + N 
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNA 201


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  357 bits (917), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 183/381 (48%), Positives = 252/381 (66%), Gaps = 14/381 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HM  +P  +S FN L G LAK K Y  V+S+  R+NSIGL  +  + +IL+NC C + 
Sbjct: 98  MIHMQTTPA-LSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVK 156

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V  GFV+FG ILR  + PN  TFT+L+KGLC E +I EA  +F  +  F C P+ IT  
Sbjct: 157 RVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCG 216

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+GLCRTG+T  AL L + M NGN + G+  KP  V+YS IID LCK+G V++AKE F
Sbjct: 217 VLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFF 276

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           ++MK + + PNVVTYTSL+HG C A++W EAK L IEMVD G+ P+VV+ +V++  LCK 
Sbjct: 277 VEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKV 336

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  AS L DLMVQ  V P+  TYN L++G+CL G ++  K++F+SM +  C+HD  SY
Sbjct: 337 GKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSY 396

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +IL+  YCK+ EV  A+ LY E+  +GI+PTV+TY+          +   A KLF E+Q 
Sbjct: 397 SILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDARKLFGEIQF 446

Query: 361 NDVAADTCTYR---TFIDGLC 378
            D+  D+ +Y     ++DGLC
Sbjct: 447 QDMVLDSISYSIYNVYLDGLC 467



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 34/362 (9%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P + +YS +I+  CK G V      F  +      PNVVT+TSL+ GLC+ S   EA  L
Sbjct: 251 PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRL 310

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F ++   G  P+V+T++ LI  LC+ G    A  LF  M     E      P+T TY+I+
Sbjct: 311 FIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVE------PSTRTYNIL 364

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I+G C  G VD+ K++FL M  +    +  +Y+ L+  +C  ++ + A  L  EM+D+G+
Sbjct: 365 IEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGI 424

Query: 224 QPNVVSS----------------------------NVIMNELCKNGKMDNASRLLDLMVQ 255
           QP V++                             NV ++ LCKNG +  A  +   +  
Sbjct: 425 QPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLEN 484

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
           C    N   +N+L++G C + K+    ELF  + +   + D  +Y I+I G CK  + ++
Sbjct: 485 CKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQK 544

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L+ E+  KG  P VVT+NTL  GL    +  + ++L  +M    ++ D  T    +D
Sbjct: 545 AYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMD 604

Query: 376 GL 377
            L
Sbjct: 605 IL 606



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 22/340 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  LL  L     ++    LF  +   GL PD+ T+S+LI   CK+G+V     +
Sbjct: 286 PNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGL 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    P+  T+  LI+G C    + E   +F  +    C+ +  +Y+ L+   C+
Sbjct: 346 FDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCK 405

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV----------------FKP---NTVTYSII---IDG 166
                 A+ L++EM +   +  V+                F+    ++++YSI    +DG
Sbjct: 406 DSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDG 465

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LCK G V +A ++F  ++      NV  + SLI+G C +     A  L   + ++ +QP+
Sbjct: 466 LCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPD 525

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV+  +++  LCK G+   A  L   M +    PN  T+NTLM G CL  +  ++ EL  
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            M +     D  +  I+++   K++   E L+L    P +
Sbjct: 586 KMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTFPVQ 625


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  353 bits (906), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 180/376 (47%), Positives = 246/376 (65%), Gaps = 9/376 (2%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           M+ +P PP+SSF  LL  LAK KHY  V  L+ ++   G+ PD  T +IL+NC C + +V
Sbjct: 88  MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRV 147

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             G  +   ILR  + P++VT+T+LIKGLC E RI +AA LFT+++  GC PN ITY TL
Sbjct: 148 GEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTL 207

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + GLCRTG+  +AL L +EM N +   G+ FKP  ++YSIIID LCK+   D+A++LF +
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK + + P V++YTSL+        W EAK L  EMV+QGVQPNVV+ NV+++ LCK GK
Sbjct: 268 MKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 319

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  LL++M+Q  + PN  TYN+L++GFCL G +N  +ELFVSM S GC+ D   Y +
Sbjct: 320 VIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTV 379

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGYCK  +VEEA+ LYN +   G +P V TY  L  GLF+  +   A KLF  M+   
Sbjct: 380 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 439

Query: 363 VAADTCTYRTFIDGLC 378
           +  D   Y  F++GLC
Sbjct: 440 IPGDLYIYGIFLNGLC 455



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 181/363 (49%), Gaps = 14/363 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++I++  L K++  D    LF+ +   G+ P + +Y+ L+    K         +
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKR--------L 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNVVTF  LI  LC E +++EA  L   +   G  PN++TYN+LI G C 
Sbjct: 292 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M +   E      P+ + Y+++I+G CK   V++A +L+  M     
Sbjct: 352 VGDLNSARELFVSMPSKGCE------PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY +L+ G        +AK L   M   G+  ++    + +N LCKNG +  A  
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + +   +++ +   +N L+DG C  GK+    ELF  +     + D  +YNI+I+ +C
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V +A  L+ ++   G  P  +TY TL  G FE ++ E+ ++L   M   DV+ D  
Sbjct: 526 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 585

Query: 369 TYR 371
             R
Sbjct: 586 ILR 588



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 8/215 (3%)

Query: 168 CKEGFVD--KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           CK G +   +A + F  M Y N  P + ++T L+ G      +++   L  +M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  + N+++N LC   ++     ++  +++    P+  TY TL+ G C+  +I++   LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL----PFKGI--KPTVVTYNTLF 339
             M+ +GC  +  +Y  L+ G C+   +  AL L+ E+       GI  KP V++Y+ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             L + R+ + A  LF EM+   +     +Y + +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM 284



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  +  + I L  L KN      + LF +L S  +  D+  ++ LI+  CK G++   + 
Sbjct: 441 PGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 500

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +F ++ +    P+VVT+  +I   C   ++V+A  LF K++  GC P+ ITY TLI G
Sbjct: 501 LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 238 CKNGKMD--NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           CK G +    A +   LM+  +  P   ++  L+ G       ++V  L+  M   G   
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  + NIL+N  C    V E L++   +  +G  P +VTY TL  GL    +  +A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
             MQ      +  TY T + GLC
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLC 212



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+  L++G  K K   +   LYN++   GI P   T N L + L  + +    L +   +
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
                  D  TY T I GLC+  ++      FT  ++ G + N 
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNA 201


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 169/376 (44%), Positives = 240/376 (63%), Gaps = 26/376 (6%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           M  +P P +SSFN LL  LAK KHY  V SL+ ++   GL  D  T +IL+NC C + ++
Sbjct: 61  MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRL 120

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             GF  F  ILR  ++PN+VT+ +LIKGLC E RI EA  LF +++  GC P+V+TY TL
Sbjct: 121 REGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTL 180

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC TG+  +AL L +EM N      +  KPN +TY+II+DGLCK G  D+AK+LF +
Sbjct: 181 IKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEE 240

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK + + PN                         EM+DQG+QP++V+ NV+++ LCK GK
Sbjct: 241 MKTQGMIPN-------------------------EMLDQGLQPDMVTFNVLIDTLCKEGK 275

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A +LL +M++  + P+  TYN+L++GFC+ G +N  +ELFVSM S GC+ D  SYN+
Sbjct: 276 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGY K  +VEEA+ LYNE+   G +P V+TY++L  G+F   + + A KLF  M+ + 
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 395

Query: 363 VAADTCTYRTFIDGLC 378
           +A ++ TY  F+DGLC
Sbjct: 396 IAENSYTYGIFLDGLC 411



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 16/357 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP----------DLYTYSILINCFCK 58
           P V ++NI++  L K    D    LF+ + + G+ P          D+ T+++LI+  CK
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+V     + G ++ S   P++VT+ SLI+G C    +  A  LF  + + GCEP+VI+
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN LING  +T     A+ L+ EM      + V  +PN +TY  ++ G+   G VD AK+
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEM------LLVGKRPNVITYDSLLKGIFLAGKVDDAKK 386

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF  MK   +  N  TY   + G C  +   EA  L  E+     +  + + N +++ LC
Sbjct: 387 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 446

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K GK++ A  L + +      PN  TY  ++ GFC  G++++   L   ME+ GC  D  
Sbjct: 447 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 506

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +YN L+ G+ ++ ++EE + L + +  K + P  +T + +   L +  + +  L L 
Sbjct: 507 TYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 190/385 (49%), Gaps = 22/385 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLF-----PDLYTYSILINCFCKMGQV 62
           P V ++  L+  L    + +  L L +  LN I  +     P++ TY+I+++  CK+G+ 
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 63  SLGFVIF----------GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
                +F            +L     P++VTF  LI  LC E +++EA  L   +   G 
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
            P+++TYN+LI G C  G    A  LF  M +   E      P+ ++Y+++I+G  K   
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE------PDVISYNVLINGYSKTLK 345

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V++A +L+ +M      PNV+TY SL+ G   A   ++AK L   M   G+  N  +  +
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
            ++ LCKN  +  A +L   +   + +      N L+DG C  GK+    ELF  + + G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y I+I+G+C+  +V++A  L  ++   G  P ++TYNTL  G +E  + E  +
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGL 377
           +L   M   DV+ D  T    +D L
Sbjct: 526 QLLHRMAQKDVSPDAITCSIVVDML 550



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 238 CKNGKMD--NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           CK G +   +A     LM++    P+  ++N L+ G       ++V  L+  M   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  + NIL+N  C    + E  + +  +  +G  P +VTYNTL  GL    +   A +LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
           + MQ      D  TY T I GLC
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLC 185



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 39/85 (45%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+N L++G  K K   +  SLYN++   G+     T N L + L  + +       F  +
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
                + +  TY T I GLC+  ++
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRI 155


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  321 bits (822), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 235/396 (59%), Gaps = 7/396 (1%)

Query: 2   RHMHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +H  PPP +  FN LL  +AK KH+ T+LSL ++++S G+ PD+YT +I+IN  C + 
Sbjct: 60  RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F    +IL+    P+  TFT+LI+GLC E +I EA  LF K+   G +PNV+TY 
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYG 179

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L + M  GN +      PN V +S +ID LCK+  V +A  +F
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQ------PNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN+VTY SLIHG C   +W     L+ EMVD  + P+V + N +++ LCK 
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M+   V PN  TYN LMDG CL  +++   ++F +M    C  +  SY
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + V++A+ L+ E+  + + P  VTYNTL HGL  + + + A+ LF EM  
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  TYRT  D LC    +    A  K   G+
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F+ L+  L K++      ++F  + + G+ P++ TY+ LI+  CK+ +      +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P+V T  +++  LC E  + EA  +   +   G EPNV+TYN L++G C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                VA+ +F  M + +         N ++Y+ +I+G CK   VDKA  LF +M  + L
Sbjct: 328 RNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LIHG CH     +A  L  EMV +G  P++V+   + + LCKN  +D A  
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   +  P+   Y T++DG C  G++   ++LF ++ S G + + ++YNI+I+G C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L++E+   G  P   TYN +  G     +A R ++L  EM     + D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 369 T 369
           T
Sbjct: 562 T 562



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K   +  V +L   +    + PD++T + +++  CK G V+    +
Sbjct: 243 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV 302

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ +L+ G C  + +  A  +F  +    C  NVI+YNTLING C+
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+EM+           PNTVTY+ +I GLC  G +  A  LF +M     
Sbjct: 363 IQSVDKAMYLFEEMSRQE------LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L    C     ++A  LL  +      P++     I++ +C+ G++++A  
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    ++PN +TYN ++ G C  G +    +LF  M   GC  +D +YN++  G+ 
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           +N E    + L  E+  +G    V T  TL  G+      ++++K
Sbjct: 537 RNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 580



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA + F ++      P+ + +N L+  + +T H    L+L ++M +     G+   P+  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDS----FGI--PPDVY 106

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+ LC    VD A     ++      P+  T+T+LI G C      EA  L  +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G QPNVV+   ++N LCK G    A RLL  M Q + +PN   ++TL+D  C   ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +F  M + G   +  +YN LI+G CK  E +   +L NE+    I P V T NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L +      A  +   M    V  +  TY   +DG C+R +V
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 125/240 (52%), Gaps = 6/240 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N L+    K +  D  + LF+ ++   L P+  TY+ LI+  C +G++     +F 
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P++VT+ +L   LC    + +A AL   ++    +P++  Y T+++G+CR G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF  +++         +PN  TY+I+I GLCK+G + +A +LF +M     +P
Sbjct: 470 ELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  TY  +  GF   N+      LL EM+ +G   +V ++ +++  L  +G   +  ++L
Sbjct: 524 NDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 35/241 (14%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D+A   F +M ++   P+ V +  L+         +    L  +M   G+ P+V +  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N LC   ++D A   L  +++   +P+A T+ TL+ G C+ GKI     LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 293 CKHDDFSYNILING-----------------------------------YCKNKEVEEAL 317
            + +  +Y  LING                                    CK+++V EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++++E+  KGI P +VTYN+L HGL ++ + +    L  EM  + +  D  T  T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 378 C 378
           C
Sbjct: 291 C 291



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  +EA      M+ +   P+ V  N ++  + K     + S LL L  Q D   + P
Sbjct: 47  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKT---KHHSTLLSLSRQMDSFGIPP 103

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + +T   +++  C   +++        +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M+  +   +   + T ID LC  
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223

Query: 381 PQV 383
            QV
Sbjct: 224 RQV 226


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  320 bits (821), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 235/396 (59%), Gaps = 7/396 (1%)

Query: 2   RHMHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +H  PPP +  FN LL  +AK KH+ T+LSL ++++S G+ PD+YT +I+IN  C + 
Sbjct: 60  RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F    +IL+    P+  TFT+LI+GLC E +I EA  LF K+   G +PNV+TY 
Sbjct: 120 RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYG 179

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L + M  GN +      PN V +S +ID LCK+  V +A  +F
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQ------PNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN+VTY SLIHG C   +W     L+ EMVD  + P+V + N +++ LCK 
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M+   V PN  TYN LMDG CL  +++   ++F +M    C  +  SY
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + V++A+ L+ E+  + + P  VTYNTL HGL  + + + A+ LF EM  
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  TYRT  D LC    +    A  K   G+
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F+ L+  L K++      ++F  + + G+ P++ TY+ LI+  CK+ +      +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P+V T  +++  LC E  + EA  +   +   G EPNV+TYN L++G C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                VA+ +F  M + +         N ++Y+ +I+G CK   VDKA  LF +M  + L
Sbjct: 328 RNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LIHG CH     +A  L  EMV +G  P++V+   + + LCKN  +D A  
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   +  P+   Y T++DG C  G++   ++LF ++ S G + + ++YNI+I+G C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L++E+   G  P   TYN +  G     +A R ++L  EM     + D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 369 T 369
           T
Sbjct: 562 T 562



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K   +  V +L   +    + PD++T + +++  CK G V+    +
Sbjct: 243 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV 302

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ +L+ G C  + +  A  +F  +    C  NVI+YNTLING C+
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+EM+           PNTVTY+ +I GLC  G +  A  LF +M     
Sbjct: 363 IQSVDKAMYLFEEMSRQE------LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L    C     ++A  LL  +      P++     I++ +C+ G++++A  
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    ++PN +TYN ++ G C  G +    +LF  M   GC  +D +YN++  G+ 
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           +N E    + L  E+  +G    V T  TL  G+      ++++K
Sbjct: 537 RNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 580



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA + F ++      P+ + +N L+  + +T H    L+L ++M +     G+   P+  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDS----FGI--PPDVY 106

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+ LC    VD A     ++      P+  T+T+LI G C      EA  L  +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G QPNVV+   ++N LCK G    A RLL  M Q + +PN   ++TL+D  C   ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +F  M + G   +  +YN LI+G CK  E +   +L NE+    I P V T NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L +      A  +   M    V  +  TY   +DG C+R +V
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 127/245 (51%), Gaps = 6/245 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N L+    K +  D  + LF+ ++   L P+  TY+ LI+  C +G++     +F 
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P++VT+ +L   LC    + +A AL   ++    +P++  Y T+++G+CR G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF  +++         +PN  TY+I+I GLCK+G + +A +LF +M     +P
Sbjct: 470 ELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  TY  +  GF   N+      LL EM+ +G   +V ++ +++  L  +G   +  ++L
Sbjct: 524 NDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583

Query: 251 DLMVQ 255
              VQ
Sbjct: 584 CKYVQ 588



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 35/241 (14%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D+A   F +M ++   P+ V +  L+         +    L  +M   G+ P+V +  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N LC   ++D A   L  +++   +P+A T+ TL+ G C+ GKI     LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 293 CKHDDFSYNILING-----------------------------------YCKNKEVEEAL 317
            + +  +Y  LING                                    CK+++V EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++++E+  KGI P +VTYN+L HGL ++ + +    L  EM  + +  D  T  T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 378 C 378
           C
Sbjct: 291 C 291



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  +EA      M+ +   P+ V  N ++  +    K  + S LL L  Q D   + P
Sbjct: 47  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSI---AKTKHHSTLLSLSRQMDSFGIPP 103

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + +T   +++  C   +++        +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 104 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 163

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M+  +   +   + T ID LC  
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223

Query: 381 PQV 383
            QV
Sbjct: 224 RQV 226


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  315 bits (806), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 154/378 (40%), Positives = 227/378 (60%), Gaps = 6/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H  P P  +    +L   +   ++YD V+SL K++  +GL P++YT SI +NCFC++ 
Sbjct: 83  MLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQ 142

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V LGF +  ++++    P +VTFT+LI GLC      +A  LF  + A GC+P+V TYN
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+ G T  A  L K+M     +      PN VTYS +ID LC++  V++A ++F
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQ------PNMVTYSTLIDSLCRDRLVNEALDIF 256

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             MK + ++P++ TYTSLI G C  + W EA  LL EM    + P++V+ NV+++  CK 
Sbjct: 257 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 316

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L  M +  V PN  TY++LM G+ L   +   ++LF  M + GCK + FSY
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYCK K ++EA+ L+NE+  +G+ P  V+YNTL HG  ++ +   A  LF  M  
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436

Query: 361 NDVAADTCTYRTFIDGLC 378
           N    D  TY   +DG C
Sbjct: 437 NGNLPDLFTYSILLDGFC 454



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 200/369 (54%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K         L K++   G  P++ TYS LI+  C+   V+    I
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P++ T+TSLI+GLC  SR  EA+AL  ++ +    P+++T+N L++  C+
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL + K MT    E+GV  +PN VTYS ++ G      V +A++LF  M  +  
Sbjct: 316 EGKVSEALGVLKTMT----EMGV--EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ +Y  LI+G+C A   +EA  L  EM+ QG+ PN VS N +++  C+ GK+  A  
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M      P+ FTY+ L+DGFC  G + +   LF +M+S   K +   Y IL++  C
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+   ++A  L++EL  +G++P V  Y T+ +GL +    + AL+ F  M+ +    D  
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEI 549

Query: 369 TYRTFIDGL 377
           +Y   I GL
Sbjct: 550 SYNVIIRGL 558


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/396 (40%), Positives = 236/396 (59%), Gaps = 7/396 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP ++ F  LL  + K KHY TVLSL  +++S G+ P++YT +ILIN FC + 
Sbjct: 59  MLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQ 117

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  +IL+    PN+ TF +LI+GLC E +I E   LF K+   G +PNV+TY 
Sbjct: 118 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 177

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQ------PDVVVYTSIIDSLCKDRQVTQAFNLF 231

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M ++ ++P++ TY SLIH  C+  +W     LL EMV+  + PNVV  + +++ LCK 
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D+M++  V PN  TYN LMDG CL  +++   ++F +M   G   D  SY
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LINGYCK + +E+A+ L+ E+  K + P  VTY+TL HGL  + + + A+ LF EM  
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  +Y   +D LC   ++    A  K   G+
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 193/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF  +   G+ P ++TY+ LI+  C + +      +
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   PNVV F++++  LC E +++EA  +   +   G EPNV+TYN L++G C 
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M          F P+ V+YS +I+G CK   ++KA  LF +M  + L
Sbjct: 326 RSEMDEAVKVFDTMVCKG------FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY++L+HG CH     +A  L  EMV +G  P+ VS  ++++ LCKN ++D A  
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   Y  ++DG C  G++   ++LF ++ S G   + ++Y I+ING C
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + EA  L+ E+  KG  P   TYN +  G     +  R ++L  EM     +AD  
Sbjct: 500 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVS 559

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 560 TSTVLVEML 568



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 6/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+         D  + +F  +   G  PD+ +YS LIN +CK+ ++     +
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN VT+++L+ GLC   R+ +A ALF ++   G  P+ ++Y  L++ LC+
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L K +   N        P+   Y+I+IDG+C+ G ++ A++LF  +  + L
Sbjct: 431 NRRLDEAIALLKAIEGSN------MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV TYT +I+G C      EA  L  EM  +G  PN  + N+I     +N +     +
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           LL  M+      +  T   L++     G    VK++ 
Sbjct: 545 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K +  +  + LF+ +    L P+  TYS L++  C +G++     +
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ V++  L+  LC   R+ EA AL   ++    +P++  Y  +I+G+CR
Sbjct: 406 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 465

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++          PN  TY+I+I+GLC++G + +A +LF +MK +  
Sbjct: 466 AGELEAARDLFSNLSSKG------LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN  TY  +  GF   N+      LL EM+ +G   +V +S V++  L  +G   +  +
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 579

Query: 249 LLDLMVQ 255
           +L   +Q
Sbjct: 580 ILSEFLQ 586



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P++  +T L+        ++    L  +M   G+ PN+ + N+
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +PN  T+NTL+ G C+ GKI  V  LF  M   G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ  +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++    TY + I  LC
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALC 254



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 4/155 (2%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    + M+     P+   +  L+         + V  L   M+S G   + ++ NI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN +C  + +  A S+  ++   G +P + T+NTL  GL    +    L LF +M G  
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 363 VAADTCTYRTFIDGLC----VRPQVRFTYARRKGN 393
              +  TY T I+GLC        +R   +  +GN
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 160/396 (40%), Positives = 236/396 (59%), Gaps = 7/396 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP ++ F  LL  + K KHY TVLSL  +++S G+ P++YT +ILIN FC + 
Sbjct: 50  MLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQ 108

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  +IL+    PN+ TF +LI+GLC E +I E   LF K+   G +PNV+TY 
Sbjct: 109 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 168

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQ------PDVVVYTSIIDSLCKDRQVTQAFNLF 222

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M ++ ++P++ TY SLIH  C+  +W     LL EMV+  + PNVV  + +++ LCK 
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D+M++  V PN  TYN LMDG CL  +++   ++F +M   G   D  SY
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LINGYCK + +E+A+ L+ E+  K + P  VTY+TL HGL  + + + A+ LF EM  
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  +Y   +D LC   ++    A  K   G+
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 193/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF  +   G+ P ++TY+ LI+  C + +      +
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   PNVV F++++  LC E +++EA  +   +   G EPNV+TYN L++G C 
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M          F P+ V+YS +I+G CK   ++KA  LF +M  + L
Sbjct: 317 RSEMDEAVKVFDTMVCKG------FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY++L+HG CH     +A  L  EMV +G  P+ VS  ++++ LCKN ++D A  
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   Y  ++DG C  G++   ++LF ++ S G   + ++Y I+ING C
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + EA  L+ E+  KG  P   TYN +  G     +  R ++L  EM     +AD  
Sbjct: 491 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVS 550

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 551 TSTVLVEML 559



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 6/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+         D  + +F  +   G  PD+ +YS LIN +CK+ ++     +
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN VT+++L+ GLC   R+ +A ALF ++   G  P+ ++Y  L++ LC+
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L K +   N        P+   Y+I+IDG+C+ G ++ A++LF  +  + L
Sbjct: 422 NRRLDEAIALLKAIEGSN------MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 475

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV TYT +I+G C      EA  L  EM  +G  PN  + N+I     +N +     +
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 535

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           LL  M+      +  T   L++     G    VK++ 
Sbjct: 536 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K +  +  + LF+ +    L P+  TYS L++  C +G++     +
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ V++  L+  LC   R+ EA AL   ++    +P++  Y  +I+G+CR
Sbjct: 397 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++          PN  TY+I+I+GLC++G + +A +LF +MK +  
Sbjct: 457 AGELEAARDLFSNLSSKG------LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN  TY  +  GF   N+      LL EM+ +G   +V +S V++  L  +G   +  +
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 570

Query: 249 LLDLMVQ 255
           +L   +Q
Sbjct: 571 ILSEFLQ 577



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P++  +T L+        ++    L  +M   G+ PN+ + N+
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +PN  T+NTL+ G C+ GKI  V  LF  M   G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ  +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++    TY + I  LC
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALC 245



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 4/155 (2%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    + M+     P+   +  L+         + V  L   M+S G   + ++ NI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN +C  + +  A S+  ++   G +P + T+NTL  GL    +    L LF +M G  
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 363 VAADTCTYRTFIDGLC----VRPQVRFTYARRKGN 393
              +  TY T I+GLC        +R   +  +GN
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 161/396 (40%), Positives = 235/396 (59%), Gaps = 7/396 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP    FN LL  +AK K Y TV SL  +++S G+ PD+YT +ILIN FC + 
Sbjct: 58  MLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLN 116

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +    F +  +IL+    P+  TFT+LI+GLC E +I +A  LF K+   G +PNV+TY 
Sbjct: 117 RPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYG 176

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQ------PDVVVYTSIIDSLCKDRQVTEAFNLF 230

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TYTSLIH  C+  +W     LL +M++  + P+VV  + +++ LCK 
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 290

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D+M+   V PN  TYN LMDG CL  +++   ++F +M   G   +  SY
Sbjct: 291 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 350

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + +++A  L+ E+  K + P  VTYNTL HGL  + + + A+ LF EM  
Sbjct: 351 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVA 410

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           +    D  TYR  +D LC +  +    A  K   G+
Sbjct: 411 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 201/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF ++   G+ PD++TY+ LI+  C + +      +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+VV F++++  LC E +I EA  +   +   G EPNV+TYN L++G C 
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M + NG     + PN ++Y+ +I+G CK   +DKA  LF +M  + L
Sbjct: 325 QSEMDEAVKVFDTMVH-NG-----YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +L+HG CH     +A  L  EMV  G  P++ +  ++++ LCK   +D A  
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   Y  ++DG C  G++   +++F ++ S G + +  +Y I+ING C
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   ++EA  L+ E+   G  P   TYNT+  GL + ++A RA++L  EM     +AD  
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 558

Query: 369 TYRTFIDGLC 378
           T    ++ LC
Sbjct: 559 TTTLLVEMLC 568



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 6/314 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F+ ++  L K         +   +   G+ P++ TY+ L++  C   ++     +
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ + +APNV+++ +LI G C   R+ +A  LF ++      PN +TYNTL++GLC 
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF EM   +G+I     P+  TY I++D LCK+  +D+A  L   ++  N+
Sbjct: 395 VGRLQDAIALFHEMV-AHGQI-----PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++  YT +I G C A +   A+ +   +  +G++PNV +  +++N LC+ G +D A++
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M      P+  TYNT+  G     +  R  +L   M + G   D  +  +L+   C
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568

Query: 309 KNKEVEEALSLYNE 322
            +K  +    + +E
Sbjct: 569 DDKLDQSVKQILSE 582



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N L+    K +  D    LF+ +    L P+  TY+ L++  C +G++     +
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++ T+  L+  LC +S + EA AL   ++    +P++  Y  +I+G+CR
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A ++F  +++         +PN  TY+I+I+GLC+ G +D+A +LF++M     
Sbjct: 465 AGELEAARDIFSNLSSKG------LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY ++  G     +   A  LL EM+ +G   +V ++ +++  LC +    +  +
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 578

Query: 249 LLDLMVQ 255
           +L   VQ
Sbjct: 579 ILSEFVQ 585



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P ++++ ILL  L K  H D  ++L K +    + PD+  Y+I+I+  C+ G++  
Sbjct: 411 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 470

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF  +      PNV T+T +I GLC    + EA  LF ++   GC P+  TYNT+  
Sbjct: 471 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 530

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           GL +    + A+ L +EM      +   F  +  T +++++ LC +      K++ 
Sbjct: 531 GLLQNKEALRAIQLLQEM------LARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P+ V +  L+        +     L  +M   G+ P+V + N+
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   +   A  +L  +++  ++P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ   A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M G  ++ D  TY + I  LC
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLC 253



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 5/194 (2%)

Query: 195 YTSLIHGFCHA-----NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           ++SL H   H+     N  ++A      M+     P+ V  N ++  + K  +      L
Sbjct: 30  FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 89

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            + M    + P+ +T N L++ FC   +      +   +  +G + D  ++  LI G C 
Sbjct: 90  SNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCV 149

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             ++ +AL L++++  +G +P VVTY TL +GL ++     A++L   M+  +   D   
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 370 YRTFIDGLCVRPQV 383
           Y + ID LC   QV
Sbjct: 210 YTSIIDSLCKDRQV 223


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  310 bits (795), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 158/376 (42%), Positives = 227/376 (60%), Gaps = 7/376 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           HMHP PP +  F  LL  +AK KHY TVLSL  +++S G+ P++YT +ILIN FC + +V
Sbjct: 49  HMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV 107

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +  +IL+    P+  TFT+LI+GLC E +I EA  LF K+   G +PNV+TY TL
Sbjct: 108 GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 167

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G+T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF Q
Sbjct: 168 INGLCKVGNTSAAIRLLRSMEQGNCQ------PDVVIYTSIIDSLCKDRQVTEAFNLFSQ 221

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P++ TYTSL+H  C+  +W     LL +MV+  + P+VV  + +++ LCK GK
Sbjct: 222 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 281

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  ++D+M+Q  V P+  TY TLMDG CL  +++   ++F  M   G   D  SY  
Sbjct: 282 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 341

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGYCK  ++++A+ L+ E+  K   P   TYNTL HGL  + + + A+ LF EM    
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401

Query: 363 VAADTCTYRTFIDGLC 378
              D  TY   +D LC
Sbjct: 402 QMPDLVTYSILLDSLC 417



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF ++   G+ PD++TY+ L++  C + +      +
Sbjct: 194 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+VV F++++  LC E ++ EA  +   +   G EP+V+TY TL++G C 
Sbjct: 254 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M          F P+ ++Y+ +I+G CK   +DKA  LF +M  +  
Sbjct: 314 QSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +L+HG CH     +A  L  EMV +G  P++V+ +++++ LCKN  ++ A  
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMA 427

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   YN ++DG C  G++   ++LF ++ S G     ++YNI+I+G C
Sbjct: 428 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 487

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L+ E+      P   TYNT+  G  +  +  RA++L  EM     +AD  
Sbjct: 488 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVS 547

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 548 TTTLLVEML 556



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 193/397 (48%), Gaps = 29/397 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+  L         L LF ++   G  P++ TY  LIN  CK+G  S    +
Sbjct: 124 PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL 183

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+VV +TS+I  LC + ++ EA  LF+++   G  P++ TY +L++ LC 
Sbjct: 184 LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 243

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
                    L  +M N      VV                              +P+ VT
Sbjct: 244 LCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 303

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++DG C +  +D+A ++F  M  +   P+V++YT+LI+G+C  +  ++A  L  EM 
Sbjct: 304 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 363

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +   P+  + N +M+ LC  G++ +A  L   MV     P+  TY+ L+D  C    + 
Sbjct: 364 RKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLE 423

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L  ++E+     D   YNI+I+G C+  E+E A  L++ L  KG+ P+V TYN + 
Sbjct: 424 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           HGL +      A KLF+EM GND + D CTY T   G
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG 520



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 138/268 (51%), Gaps = 9/268 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+    K    D  + LF+ +      PD  TY+ L++  C +G++     +
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++VT++ L+  LC    + EA AL   ++A    P++  YN +I+G+CR
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++          P+  TY+I+I GLCK G +++A +LF++M   + 
Sbjct: 454 AGELEAARDLFSNLSSKG------LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY ++  GF   N+   A  LL EM+ +G   +V ++ +++  L  +G +D +S 
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG-LDQSSC 566

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            L L V  +     F +  + +GF L G
Sbjct: 567 FLMLSVLSEDDRRYFIF--IPEGFDLLG 592



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 11/299 (3%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F +L      P+++ +  L+  + +  H    L+L  +M +     GV   PN  
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS----FGV--PPNVY 92

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C    V  A  +  ++      P+  T+T+LI G C      EA  L  +M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G QPNVV+   ++N LCK G    A RLL  M Q + +P+   Y +++D  C   ++
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                LF  M   G   D F+Y  L++  C   E +   +L N++    I P VV ++T+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
              L +  +   A ++   M    V  D  TY T +DG C++ ++      F    RKG
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F ++ + +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ   A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M G  ++ D  TY + +  LC
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALC 242



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  ++A      ++     P++V    ++  +    KM + S +L L  Q D   V P
Sbjct: 33  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPP 89

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N +T N L++ FC   ++     +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 90  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 149

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M+  +   D   Y + ID LC  
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209

Query: 381 PQV 383
            QV
Sbjct: 210 RQV 212


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  310 bits (793), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 151/370 (40%), Positives = 233/370 (62%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+  FN ++G L K KHY T +SLFK++   G+ PDL+T +ILINCFC +GQ++  F +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+IL+  + PN +T  +L+KGLC +  + ++     K+ A G + + ++Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  AL L + + + +       +PN V Y+ IIDGLCK+  V++A +L+ +M    +
Sbjct: 128 IGETRSALKLLRMIEDRST------RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++LI+GFC A    EA GLL EM+ + + PNV +  ++M+ LCK GK+  A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M +  V+PN  +YNTLMDG+CL G++   K++F +M   G   + +SYNI+I+  C
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K V+EA++L  E+  K + P  VTY++L  G  ++ +   AL L  EM      AD  
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVV 361

Query: 369 TYRTFIDGLC 378
           TY + +D LC
Sbjct: 362 TYTSLLDALC 371



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 203/365 (55%), Gaps = 10/365 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K+K  +    L+  +++ G+FP++ TYS LI  FC  GQ+   F +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNV T+T L+  LC E ++ EA  L   +   G +PNV++YNTL++G C 
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M     + GV   PN  +Y+I+ID LCK   VD+A  L  ++ ++N+
Sbjct: 268 IGEVQNAKQMFHTMV----QKGV--NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+SLI GFC       A  LL EM  +G   +VV+   +++ LCKN  +D A+ 
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATA 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  ++PN +TY  L+DG C  G+    ++LF  +   GC+ + ++YN++I+G C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLC 441

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EAL++ +++   G  P  VT+  +   LFE  Q ++A KL  EM    +A D  
Sbjct: 442 KEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM----IAKDLL 497

Query: 369 TYRTF 373
            +R F
Sbjct: 498 RFRDF 502



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N L+  L         L    ++ + G   D  +Y+ L+N  CK+G+      +
Sbjct: 78  PNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      PNVV + ++I GLC +  + EA  L++++ A G  PNVITY+TLI G C 
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCL 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM   N        PN  TY+I++D LCKEG V +AK L   M  E +
Sbjct: 198 AGQLMEAFGLLNEMILKN------INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y +L+ G+C   +   AK +   MV +GV PNV S N++++ LCK+ ++D A  
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  ++  ++ PN  TY++L+DGFC  G+I    +L   M   G   D  +Y  L++  C
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN+ +++A +L+ ++  +GI+P   TY  L  GL +  + + A KLF  +       +  
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 432 TYNVMISGLC 441



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 6/306 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
            P ++ F  ++  L        A +LF +++  G EP++ T N LIN  C  G    +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +  ++      + + ++PNT+T + ++ GLC +G V K+     ++  +    + V+Y +
Sbjct: 67  VLGKI------LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L++G C   +   A  LL  + D+  +PNVV  N I++ LCK+  ++ A  L   M    
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + PN  TY+TL+ GFCL G++     L   M       + ++Y IL++  CK  +V+EA 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L   +  +G+KP VV+YNTL  G   I + + A ++F  M    V  +  +Y   ID L
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 378 CVRPQV 383
           C   +V
Sbjct: 301 CKSKRV 306



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 6/271 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P ++ +N ++  L +  H   A++LFK+M     E      P+  T +I+I+  C  G +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIE------PDLFTLNILINCFCHLGQM 61

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             +  +  ++      PN +T  +L+ G C   +  ++     ++V QG Q + VS   +
Sbjct: 62  TFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATL 121

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N LCK G+  +A +LL ++     RPN   YNT++DG C    +N   +L+  M++ G 
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +  +Y+ LI G+C   ++ EA  L NE+  K I P V TY  L   L +  + + A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L   M    V  +  +Y T +DG C+  +V+
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 69/136 (50%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P  V ++  LL  L KN++ D   +LF ++   G+ P+ YTY+ LI+  CK G+     
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQ 415

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L      NV T+  +I GLC E  + EA A+ +K++  GC P+ +T+  +I  L
Sbjct: 416 KLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475

Query: 127 CRTGHTIVALNLFKEM 142
                   A  L  EM
Sbjct: 476 FEKDQNDKAEKLLHEM 491



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P ++  N I+  L K      A  L   M    + P+ FT N L++ FC  G++     +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              +  +G + +  + N L+ G C   EV+++L  ++++  +G +   V+Y TL +GL +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           I +   ALKL   ++      +   Y T IDGLC    V   Y
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/396 (39%), Positives = 235/396 (59%), Gaps = 7/396 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HM P PP V  F  +L  +A  KHY TVLSL K+++S+G+  D+YT +I+IN FC + 
Sbjct: 65  MLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLN 123

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V  GF +  +I +    P+  TFT+LI+GLC E +I EA  LF K+   G +PN +TY 
Sbjct: 124 RVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYG 183

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+GLC+ G++  A+ L + M   N E      PN +TY+ IID L K+  V++A  +F
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMVQKNCE------PNVITYNTIIDCLFKDRQVNEALNIF 237

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNV TY S+IHG C  ++W     L+ EMVD  + PNVV    +++ LCK 
Sbjct: 238 SEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKE 297

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M+Q  V P+  TY  LMDG CL  +++   ++F +M   GC  +  SY
Sbjct: 298 GMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISY 357

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LINGYCK + +++A+ L+ E+  + + P +VTYNTL HGL  + +   A+ LF EM  
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVA 417

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           +    D  TYR  +D LC    +    A  K   G+
Sbjct: 418 SGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGS 453



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++ CL K++  +  L++F  + + G+ P++ TY+ +I+  CK  +      +
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   PNVV FT+L+  LC E  +  A  +   +   G EP+V+TY  L++G C 
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F  M            PN ++YS +I+G CK   +DKA  LF +M    L
Sbjct: 332 RSEMDEADKVFDTMVRKG------CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTY +LIHG CH     +A  L  EMV  G  P++V+  ++++ LCK   +D A  
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  +   ++ P+  +YN ++DG C  G++    +LF S+ S G   D ++Y I+ING C
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + EA  L+ E+   G  P   TYN +  G     +   A++L  EM G   +AD  
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 566 TITLIVEML 574



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 141/277 (50%), Gaps = 6/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+         D    +F  +   G  P++ +YS LIN +CK+ ++     +
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PN+VT+ +LI GLC   R+ +A ALF ++ A G  P+++TY  L++ LC+
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T H   A+ + K +   N        P+  +Y+I+IDG+C+ G ++ A +LF  +  + L
Sbjct: 437 TRHLDQAMAMLKAIEGSN------LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TYT +I+G C      EA  L  EM   G  P+  + N+I     +N +  +A +
Sbjct: 491 HPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQ 550

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           LL  M+      +A T   +++     G    VK++ 
Sbjct: 551 LLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 13/306 (4%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I EA + F ++      P+V+ +  ++  +    H    L+L K+M +    +G+   P+
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDS----LGI---PS 107

Query: 157 TV-TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
            V T +I+I+  C    VD    +  ++      P+  T+T+LI G C      EA  L 
Sbjct: 108 DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLF 167

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +MV +G QPN V+   +++ LCK G    A RLL  MVQ +  PN  TYNT++D     
Sbjct: 168 DKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKD 227

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            ++N    +F  M + G   +  +YN +I+G CK  E +   +L NE+    I P VV +
Sbjct: 228 RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIF 287

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARR 390
            TL   L +      A  +   M    V  D  TY   +DG C+R ++      F    R
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347

Query: 391 KGNSGN 396
           KG + N
Sbjct: 348 KGCAPN 353



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K +  D  + LF+ +    L P++ TY+ LI+  C +G++     +
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ S   P++VT+  L+  LC    + +A A+   ++     P++ +YN +I+G+CR
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++          P+  TY+I+I+GLC +G + +A +LF +M  +  
Sbjct: 472 VGELEAAGDLFSSLSSKG------LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY  +  GF   N+   A  LL EM+ +G   +  +  +I+  L  +G   +  +
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQ 585

Query: 249 LLDLMVQ 255
           +L   VQ
Sbjct: 586 ILHEFVQ 592



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 11/201 (5%)

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRPNA 262
           N  +EA      M+     P+VV    I+  +     M + S +L L  Q D   +  + 
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSI---ANMKHYSTVLSLSKQMDSLGIPSDV 109

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
           +T   +++ FC   +++    +   +  +G + D  ++  LI G C   ++ EAL L+++
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +G +P  VTY TL HGL ++  +  A++L   M   +   +  TY T ID L    Q
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229

Query: 383 VR-----FTYARRKGNSGNTN 398
           V      F+    KG S N +
Sbjct: 230 VNEALNIFSEMIAKGISPNVS 250


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/377 (42%), Positives = 231/377 (61%), Gaps = 8/377 (2%)

Query: 4   MHPSPPP-VSSFNILLGCLAKNKHY-DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           +H  P P +  FN LL  + K +HY D V+SL K++   GL PD YT  +LINCF ++ +
Sbjct: 113 LHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQR 172

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V LGF +  +I++      +VTF +LI GLC   +  +A  LF  + A G +P+V TY T
Sbjct: 173 VDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTT 232

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +INGLC+ G T+ A  LF++M    GE G   +P+ VTYS IID LCK+  V++A ++F 
Sbjct: 233 IINGLCKIGETVAAAGLFRKM----GEAGC--QPDVVTYSTIIDSLCKDRRVNEALDIFS 286

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            MK + ++PN+ TY SLI G C+ + W EA  +L EM+   + PN+V+ ++++N  CK G
Sbjct: 287 YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEG 346

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +  A  +L  M +  V PN  TY++LM+G+ L  ++   ++LF  M + GCK D FSYN
Sbjct: 347 NVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYN 406

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILINGYCK K + EA  L+NE+  +G+ P +V+YNTL  GL ++ +   A  LF  M  N
Sbjct: 407 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 466

Query: 362 DVAADTCTYRTFIDGLC 378
               D CTY   +DG C
Sbjct: 467 GNLPDLCTYSILLDGFC 483



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 207/368 (56%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +FN L+  L K   +   + LF  + + G  PD++TY+ +IN  CK+G+      +F 
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFR 251

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   P+VVT++++I  LC + R+ EA  +F+ +KA G  PN+ TYN+LI GLC   
Sbjct: 252 KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 311

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +  EM + N        PN VT+S++I+  CKEG V +A+ +   M    + P
Sbjct: 312 RWREASAMLNEMMSLN------IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVVTY+SL++G+    +  EA+ L   M+ +G +P+V S N+++N  CK  ++  A +L 
Sbjct: 366 NVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 425

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+   + P+  +YNTL+DG C  G++    +LF +M + G   D  +Y+IL++G+CK 
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 485

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + +A  L+  +    +KP +V YN L   + + R  + A KLF E+    +  +   Y
Sbjct: 486 GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545

Query: 371 RTFIDGLC 378
            T I+GLC
Sbjct: 546 TTIINGLC 553



 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 206/369 (55%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K         LF+++   G  PD+ TYS +I+  CK  +V+    I
Sbjct: 225 PDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN+ T+ SLI+GLC  SR  EA+A+  ++ +    PN++T++ LIN  C+
Sbjct: 285 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + K MT    E+GV  +PN VTYS +++G   +  V +A++LF  M  +  
Sbjct: 345 EGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V +Y  LI+G+C A    EAK L  EM+ QG+ P++VS N +++ LC+ G++  A  
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+     P+  TY+ L+DGFC  G + +   LF +M+S   K +   YNILI+  C
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ ++EA  L++EL  +G++P V  Y T+ +GL +    + AL+ F  M+ +    +  
Sbjct: 519 KSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEF 578

Query: 369 TYRTFIDGL 377
           +Y   I G 
Sbjct: 579 SYNVIIRGF 587



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 8/223 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NIL+    K K       LF  +   GL PD+ +Y+ LI+  C++G++     +
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L +   P++ T++ L+ G C +  + +A  LF  +++   +PN++ YN LI+ +C+
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + +   A  LF E+   G        +PN   Y+ II+GLCKEG +D+A E F  M+ + 
Sbjct: 520 SRNLKEARKLFSELFVQG-------LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             PN  +Y  +I GF    D + A  L+ EM ++G   +V ++
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATT 615


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/377 (40%), Positives = 228/377 (60%), Gaps = 8/377 (2%)

Query: 4   MHPSPPP-VSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           +H  P P +  FN LL  + +  ++YD V+SL K++   GL P+  T +ILINCFC M  
Sbjct: 82  LHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQH 141

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V LGF +  ++++    P ++TFT+LI GLC      +A  LF  + A GC+P+V TY T
Sbjct: 142 VDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTT 201

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +INGLC+ G T  A  L K+M    GE+G   +P+ VTYS +ID LCK+  V++A ++F 
Sbjct: 202 IINGLCKMGETAAAAGLIKKM----GEVGC--QPDVVTYSTLIDSLCKDRLVNEALDIFS 255

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            MK + ++P VV+YTSLI G C  + W EA  +L EM    + P++V+ +++++  CK G
Sbjct: 256 YMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEG 315

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +  A  +L  M +  V PN  TYN+LM G+ L  ++   ++LF  M + GCK D FSY+
Sbjct: 316 NVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYS 375

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILINGYC  K ++EA  L+NE+  +G+ P  V+Y TL H   ++ +   A +LF +M  N
Sbjct: 376 ILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN 435

Query: 362 DVAADTCTYRTFIDGLC 378
               D CTY   ++G C
Sbjct: 436 GYLPDLCTYSVLLEGFC 452



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K   +   L LF  + + G  PD+YTY+ +IN  CKMG+ +    +
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGL 218

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+++LI  LC +  + EA  +F+ +KA G  P V++Y +LI GLC 
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCS 278

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  EMT+ N        P+ VT+S++ID  CKEG V +A+ +   M    +
Sbjct: 279 FSRWKEASAMLNEMTSLN------IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY SL+HG+    +  EA+ L   M+ +G +P+V S ++++N  C   ++D A +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+   + PN  +Y TL+  FC  GK+   +ELF  M + G   D  +Y++L+ G+C
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + +A  L+  +    +KP +V Y  L   + +      A KLF E+  + +  D  
Sbjct: 453 KQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQ 512

Query: 369 TYRTFIDGLC 378
            Y T I+GLC
Sbjct: 513 IYTTIINGLC 522



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 194/390 (49%), Gaps = 29/390 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K         L K++  +G  PD+ TYS LI+  CK   V+    I
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P VV++TSLI+GLC+ SR  EA+A+  ++ +    P+++T++ LI+  C+
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G+ + A  + K MT    E  V+                              KP+  +
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFS 373

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YSI+I+G C    +D+AK+LF +M ++ L PN V+YT+LIH FC      EA+ L  +M 
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P++ + +V++   CK G +  A RL   M    ++PN   Y  L+D  C +G +N
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             ++LF  +   G + D   Y  +ING CK   ++EAL  + ++   G  P   +YN + 
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            G  + +   RA++L  EM+     AD  T
Sbjct: 554 RGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   P + ++++LL    K  +      LF+ +    L P+L  Y+ILI+  CK G +
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +      P+V  +T++I GLC E  + EA   F K++  GC PN  +YN +
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVI 552

Query: 123 INGLCRTGHTIVALNLFKEMTN 144
           I G  +      A+ L  EM +
Sbjct: 553 IRGFLQHKDESRAVQLIGEMRD 574


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  308 bits (789), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/378 (40%), Positives = 223/378 (58%), Gaps = 6/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H  P P  +    +L   +   ++Y  V+SL K++   GL PD+YT SILI+CF  + 
Sbjct: 85  MLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQ 144

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V L F +F ++++    P+ VTF +LI GLC   +  +A   F   +A GC+P V TY 
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+ G T  A  LFK+M     E G   +PN VTY+I+ID LCK+  V++A ++F
Sbjct: 205 TIINGLCKIGETTAAAGLFKKME----EAGC--QPNVVTYNILIDSLCKDKLVNEALDIF 258

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             MK + ++P++ TY SLI G C+   W EA  LL EM    + PN+ + NV+++ +CK 
Sbjct: 259 SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +   M +  V P+  TY++LM G+ L  +I   ++LF +M + GCK D FSY
Sbjct: 319 GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSY 378

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILI GYCK K ++EA  L+NE+  +G+ P  V YNTL HGL ++ +   A  LF  M  
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438

Query: 361 NDVAADTCTYRTFIDGLC 378
           N    D  TY   +DG C
Sbjct: 439 NGNLPDLFTYSMLLDGFC 456



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 185/390 (47%), Gaps = 29/390 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K         LFK++   G  P++ TY+ILI+  CK   V+    I
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P++ T+ SLI+GLC   R  EA+AL  ++ +    PN+ T+N L++ +C+
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK 317

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A  +FK MT    E  VV                              KP+  +
Sbjct: 318 EGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFS 377

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+I G CK   +D+AK+LF +M ++ L P+ V Y +LIHG C      EA+ L   M 
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P++ + +++++  CK G +  A RL  +M    ++P+   YN L+D  C  G + 
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             ++LF  +   G   +   Y  +IN  CK   ++EAL  +  +   G  P   +YN + 
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            G  + +   RA +L  EM+     A+  T
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 4/158 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H + + P + ++++LL    K  +      LF+ + S  L PD+  Y+ILI+  CK G +
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +      PNV  +T++I  LC E  + EA   F  ++  GC P+  +YN +
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
           I G  +      A  L  EM +     G V +  T T+
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDR----GFVAEAGTTTW 590


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 157/376 (41%), Positives = 227/376 (60%), Gaps = 7/376 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           HMHP PP +  F  LL  +AK KHY TVLSL  +++S G+ P++YT +ILIN FC + +V
Sbjct: 58  HMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV 116

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +  +IL+    P+  TFT+LI+GLC E +I EA  LF K+   G +PNV+TY TL
Sbjct: 117 GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 176

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G+T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF Q
Sbjct: 177 INGLCKVGNTSAAIRLLRSMEQGNCQ------PDVVIYTSIIDSLCKDRQVTEAFNLFSQ 230

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P++ TYTSL+H  C+  +W     LL +MV+  + P+VV  + +++ LCK GK
Sbjct: 231 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 290

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  ++D+M+Q  V P+  TY TLMDG CL  +++   ++F  M   G   D  SY  
Sbjct: 291 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 350

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LINGYCK  ++++A+ L+ E+  K   P   TYNTL +GL  + + + A+ LF EM    
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410

Query: 363 VAADTCTYRTFIDGLC 378
              D  TY   +D LC
Sbjct: 411 QMPDLVTYSILLDSLC 426



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 193/360 (53%), Gaps = 6/360 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF ++   G+ PD++TY+ L++  C + +      +
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+VV F++++  LC E ++ EA  +   +   G EP+V+TY TL++G C 
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M          F P+ ++Y+ +I+G CK   +DKA  LF +M  +  
Sbjct: 323 QSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 376

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +L++G CH     +A  L  EMV +G  P++V+ +++++ LCKN  ++ A  
Sbjct: 377 IPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMA 436

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   YN ++DG C  G++   ++LF ++ S G     ++YNI+I+G C
Sbjct: 437 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 496

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L+ E+      P   TYNT+  G  +  +  RA++L  EM     +AD+C
Sbjct: 497 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSC 556



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 192/398 (48%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+  L         L LF ++   G  P++ TY  LIN  CK+G  S    +
Sbjct: 133 PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL 192

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+VV +TS+I  LC + ++ EA  LF+++   G  P++ TY +L++ LC 
Sbjct: 193 LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 252

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
                    L  +M N      VV                              +P+ VT
Sbjct: 253 LCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 312

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++DG C +  +D+A ++F  M  +   P+V++YT+LI+G+C  +  ++A  L  EM 
Sbjct: 313 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +   P+  + N +M  LC  G++ +A  L   MV     P+  TY+ L+D  C    + 
Sbjct: 373 RKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L  ++E+     D   YNI+I+G C+  E+E A  L++ L  KG+ P+V TYN + 
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           HGL +      A KLF+EM GND + D CTY T   G 
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F +L      P+++ +  L+  + +  H    L+L  +M +     GV   PN  
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS----FGV--PPNVY 101

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C    V  A  +  ++      P+  T+T+LI G C      EA  L  +M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G QPNVV+   ++N LCK G    A RLL  M Q + +P+   Y +++D  C   ++
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                LF  M   G   D F+Y  L++  C   E +   +L N++    I P VV ++T+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L +  +   A ++   M    V  D  TY T +DG C++ ++
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F ++ + +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ   A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M G  ++ D  TY + +  LC
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALC 251



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 10/203 (4%)

Query: 188 LNPNVVTYTSLIHGF----CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           L+P +  ++S  + F     H N  ++A      ++     P++V    ++  + K   M
Sbjct: 22  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAK---M 78

Query: 244 DNASRLLDLMVQCD---VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            + S +L L  Q D   V PN +T N L++ FC   ++     +   +  +G + D  ++
Sbjct: 79  KHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTF 138

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI G C   ++ EAL L++++  +G +P VVTY TL +GL ++     A++L   M+ 
Sbjct: 139 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 198

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
            +   D   Y + ID LC   QV
Sbjct: 199 GNCQPDVVIYTSIIDSLCKDRQV 221


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 161/378 (42%), Positives = 237/378 (62%), Gaps = 10/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY T +SL  RL   G+ PDL T +ILINCFC MG
Sbjct: 53  MRH----TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ +TFT+LIKGLC + ++ +A     KL A G + + ++Y 
Sbjct: 109 QITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYG 168

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+ L +++       G + KPN   Y+ IID LCK   V +A  LF
Sbjct: 169 TLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ +VVTYT+LI+GFC A+   EA GLL EMV + + PNV + N++++ LCK 
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L +M++  V+P+  TY+TLMDG+ L  ++ + + +F +M  MG   D  SY
Sbjct: 283 GKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSY 342

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILING+CKNK V+EAL+L+ E+  K + P +VTY++L  GL +  +      L  EM+ 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 361 NDVAADTCTYRTFIDGLC 378
             + A+  TY + IDGLC
Sbjct: 403 RGIPANVITYNSLIDGLC 420



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++  L K +       LF  + + G+  D+ TY+ LI  FC   ++    
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV T+  L+  LC E ++ EA  +   +     +P+VITY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  +Y+I+I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYELKKAQHVFNAMS----LMGVT--PDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P +VTY+SLI G C +   +    L+ EM D+G+  NV++ N +++ LCKNG +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + M    +RP +FT+  L+DG C  G++   +E F  + + G   D + YN++ING
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +CK   +EEAL++ +++   G  P  VT++ + + LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  + K       + L ++++     P++  Y+ +I+  CK   VS  + +F  +
Sbjct: 166 SYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 225

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                + +VVT+T+LI G C  S++ EA  L  ++      PNV TYN L++ LC+ G  
Sbjct: 226 TAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N+   M      +    KP+ +TYS ++DG      + KA+ +F  M    + P+V
Sbjct: 286 KEAKNVLAVM------LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +YT LI+GFC     +EA  L  EM  + + P +V+ + +++ LCK+G++     L+D 
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  N  TYN+L+DG C  G ++R   LF  M+  G +   F++ IL++G CK   
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A   + +L  KG    V  YN + +G  +    E AL +  +M+ N    +  T+  
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519

Query: 373 FIDGL 377
            I+ L
Sbjct: 520 IINAL 524



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 151/285 (52%), Gaps = 6/285 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++YTY+IL++  CK G+V     +   +L++C  P+V+T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V +Y  LING C+      ALNLFKEM   N        P  VTYS +
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK G +    +L  +M+   +  NV+TY SLI G C     + A  L  +M DQG+
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P   +  ++++ LCK G++ +A      ++      + + YN +++G C  G +     
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   ME  GC  +  +++I+IN   K  E ++A  L  ++  +G+
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 160/378 (42%), Positives = 232/378 (61%), Gaps = 10/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY T +SL  RL   G+ PDL T +ILINCFC MG
Sbjct: 53  MRHT----PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ VT  +LIKGLC + ++ +A     KL A G + N ++Y 
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYG 168

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+ L +++       G + KPN V YS IID LCK   V +A  LF
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKID------GRLTKPNVVMYSTIIDALCKYQLVSEAYGLF 222

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ +VVTY++LI+GFC      EA GLL EMV + + PNV + N++++ LCK 
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L +M++  V+P+  TY+TLMDG+ L  ++ + + +F +M  MG   D  +Y
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILING+CKNK V+EAL+L+ E+  K + P +VTY++L  GL +  +      L  EM  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHD 402

Query: 361 NDVAADTCTYRTFIDGLC 378
               A+  TY + IDGLC
Sbjct: 403 RGQPANVITYSSLIDGLC 420



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 161/270 (59%), Gaps = 8/270 (2%)

Query: 25   KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            KHY T +SL  RL   G+ PDL+T +ILINCFC MGQ++  F I  +IL+  + P+ +TF
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 85   TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            T+LI GLC + ++ +A     KL A G + N ++Y TLING+C+ G T  A+ L +++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID- 1058

Query: 145  GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                 G + KP+ V Y+ IID LCK   V KA  LF +M  + ++ +VVTY +LI+GFC 
Sbjct: 1059 -----GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 205  ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK--MDNASRLLDLMVQCDVRPNA 262
                 EA GLL +MV + + PNV + N++++ LCK GK  +D +  +L  M     + NA
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 263  FTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             T+  ++       + ++V++L   M + G
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 184/338 (54%), Gaps = 6/338 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  ++ ++  L K +       LF  +   G+  D+ TYS LI  FC  G++    
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV T+  L+  LC E ++ EA ++   +     +P+VITY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  TY+I+I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P +VTY+SLI G C +        L+ EM D+G   NV++ + +++ LCKNG +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRA 428

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + M    +RPN FT+  L+DG C  G++   +E+F  + + G   + ++YN++I+G
Sbjct: 429 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +CK   +EEAL++ +++   G  P  VT+  +   LF+
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 19/385 (4%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H  PP +             ++ D  +S F R+  +   P +  ++ +++ F KM   
Sbjct: 29  HFHSQPPSI-------------QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S    +  R+      P+++T   LI   C   +I    ++  K+   G  P+ +T NTL
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC  G    AL+   ++      +   F+ N V+Y  +I+G+CK G    A +L  +
Sbjct: 136 IKGLCLKGQVKKALHFHDKL------LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQK 189

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +      PNVV Y+++I   C     +EA GL  EM  +G+  +VV+ + ++   C  GK
Sbjct: 190 IDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  LL+ MV   + PN +TYN L+D  C  GK+   K +   M     K D  +Y+ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L++GY    EV++A  ++N +   G+ P V TY  L +G  + +  + AL LF EM   +
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTY 387
           +     TY + IDGLC   ++ + +
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVW 394



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 185/405 (45%), Gaps = 41/405 (10%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N L+  L         L    +L + G   +  +Y  LIN  CK+G       
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 185

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +I      PNVV ++++I  LC    + EA  LF+++   G   +V+TY+TLI G C
Sbjct: 186 LLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 245

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG---------------- 171
             G    A+ L  EM      +     PN  TY+I++D LCKEG                
Sbjct: 246 IEGKLKEAIGLLNEM------VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 172 -------------------FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
                               V KA+ +F  M    + P+V TYT LI+GFC     +EA 
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM  + + P +V+ + +++ LCK+G++     L+D M       N  TY++L+DG 
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G ++R   LF  M+  G + + F++ IL++G CK   +++A  ++ +L  KG    V
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            TYN +  G  +    E AL +  +M+ N    D  T+   I  L
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 142/269 (52%), Gaps = 6/269 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++YTY+IL++  CK G+V     +   +L++C  P+V+T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V TY  LING C+      ALNLFKEM   N        P  VTYS +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK G +    +L  +M       NV+TY+SLI G C     + A  L  +M DQG+
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN  +  ++++ LCK G++ +A  +   ++      N +TYN ++DG C  G +     
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +   ME  GC  D  ++ I+I    K  E
Sbjct: 501 MLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 8/261 (3%)

Query: 100  AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
            A +L  +L+  G +P++ T N LIN  C  G      ++  ++          + P+T+T
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG------YHPDTIT 998

Query: 160  YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            ++ +I+GLC +G V+KA     ++  +    N V+Y +LI+G C   D   A  LL ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 220  DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             +  +P+VV  N I++ LCK+  +  A  L   M    +  +  TYNTL+ GFC+ GK+ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 280  RVKELFVSMESMGCKHDDFSYNILINGYCKNKE--VEEALSLYNELPFKGIKPTVVTYNT 337
                L   M       +  +YNIL++  CK  +  ++E+LS+ +++   G K   VT+  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 338  LFHGLFEIRQAERALKLFVEM 358
            +   LFE  + ++  KL  EM
Sbjct: 1179 IISALFEKDENDKVEKLLHEM 1199



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 102/203 (50%)

Query: 176  AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
            A  L  +++ + + P++ T   LI+ FCH         +L +++ +G  P+ ++   ++N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 236  ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             LC  G+++ A    D ++    + N  +Y TL++G C  G      +L   ++    K 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 296  DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            D   YN +I+  CK++ V +A  L+ E+  KGI   VVTYNTL +G   + + + A+ L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 356  VEMQGNDVAADTCTYRTFIDGLC 378
             +M    +  +  TY   +D LC
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALC 1147



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%)

Query: 221  QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            +G+QP++ + N+++N  C  G++     +L  +++    P+  T+ TL++G CL G++N+
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 281  VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                   + + G + +  SY  LING CK  +   A+ L  ++  +  KP VV YNT+  
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 341  GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             L + +   +A  LF EM    ++AD  TY T I G C+  +++
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 104/244 (42%), Gaps = 57/244 (23%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+    KNK  D  L+LFK ++   + P + TYS LI+  CK G++   + +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN------------- 115
              +       NV+T++SLI GLC    +  A ALF K+K  G  PN             
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 116 ----------------------VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                 V TYN +I+G C+ G    AL +  +M + NG I    
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED-NGCI---- 511

Query: 154 KPNTVTYSIIIDGLCKE-------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            P+ VT+ III  L K+       GF  K  E+    K E         T  I   CH++
Sbjct: 512 -PDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGE---------TPSITFKCHSH 561

Query: 207 DWNE 210
           D  E
Sbjct: 562 DGEE 565



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%)

Query: 258  VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            ++P+ FT N L++ FC  G+I     +   +   G   D  ++  LING C   +V +AL
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 318  SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              +++L  +G +   V+Y TL +G+ +I     A+KL  ++ G     D   Y T ID L
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 378  CVRPQVRFTYA 388
            C    V   Y 
Sbjct: 1077 CKHQLVSKAYG 1087



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 311  KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            K    A+SL + L  KGI+P + T N L +    + Q      +  ++       DT T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 371  RTFIDGLCVRPQV 383
             T I+GLC++ QV
Sbjct: 1000 TTLINGLCLKGQV 1012


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/378 (39%), Positives = 233/378 (61%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H HP P  V  F+ LL  L + KHY TVLSL KR+  + +  D++ ++ILINCF ++ 
Sbjct: 75  MIHKHPLPCIVE-FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQ 133

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F + G+I++  F P+ VTF+SLI GLC E +   A   F ++ A G +PN+ TYN
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+I G C+ G T VA+ L K+M    G      +P+ V Y+ IIDGLCK+  V +A ++F
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGG------RPDIVIYNTIIDGLCKDRLVSEALDIF 247

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++K + + P+V TY+ L+HG C+++   EA  L  EM+   + P+VV+ N+++++LCK 
Sbjct: 248 SEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKE 307

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++ +M++  V PN  TYN+LM+G+CL  K+   + +F +M + GC  +  SY
Sbjct: 308 GMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSY 367

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYCK + ++EA  L++E+ F+G+ P    YNTL  GL +  +   A +LF +MQ 
Sbjct: 368 NILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQA 427

Query: 361 NDVAADTCTYRTFIDGLC 378
              + D  T    +D LC
Sbjct: 428 QGCSPDLVTCTILLDSLC 445



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 188/336 (55%), Gaps = 6/336 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L     +   +  F  + + G  P+L+TY+ +I  FCK+G+ ++   +
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ ++   P++V + ++I GLC +  + EA  +F+++K  G  P+V TY+ L++GLC 
Sbjct: 212 LKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCN 271

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A  LF EM + N        P+ VT++I++D LCKEG + +A+ +   M  + +
Sbjct: 272 SDQKEEASALFNEMMSLN------IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY SL++G+C  N   EA+ +   M+ +G  PNVVS N+++N  CK  ++D A  
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    + PN F YNTL+ G C  G+    +ELF  M++ GC  D  +  IL++  C
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           K   ++ AL L+  +    +KP +VTY+ L   +++
Sbjct: 446 KLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 8/273 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N ++  L K++     L +F  +   G+ PD++TYSIL++  C   Q      +
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+VVTF  L+  LC E  + EA  +   +   G EPN  TYN+L+NG C 
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                 A  +F  M T G         PN V+Y+I+I+G CK   +D+A+ELF +M +  
Sbjct: 342 QNKVFEARMVFDAMITKG-------CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN   Y +LI G C A    EA+ L  +M  QG  P++V+  ++++ LCK G +DNA 
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           RL   M    ++PN  TY+ L+     +GKI R
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 144/273 (52%), Gaps = 12/273 (4%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P ++ ++ L++ L R  H    L+L K +     E+ +  + +   ++I+I+   +   V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRI-----EL-LRIERDVFHFNILINCFSRLQRV 135

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D A  +  ++      P+ VT++SLI+G C  + +  A     EMV  G QPN+ + N I
Sbjct: 136 DFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI 195

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +   CK GK   A  LL  M +   RP+   YNT++DG C    ++   ++F  ++  G 
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE---IRQAER 350
           + D F+Y+IL++G C + + EEA +L+NE+    I P VVT+N L   L +   + +A+ 
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +K+ +E     V  +  TY + ++G C++ +V
Sbjct: 316 IIKIMIE---KGVEPNYATYNSLMNGYCLQNKV 345


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 160/378 (42%), Positives = 232/378 (61%), Gaps = 10/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY T +SL  RL   G+ PDL T +ILINCFC MG
Sbjct: 53  MRH----TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ VT  +LIKGLC + ++ +A     KL A G + N ++Y 
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+ L +++       G + KPN   YS IID LCK   V +A  LF
Sbjct: 169 TLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 222

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ +VVTY++LI+GFC      EA GLL EMV + + PNV + N++++ LCK 
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L +M++  V+P+  TY+TLMDG+ L  ++ + + +F +M  MG   D  +Y
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILING+CKNK V+EAL+L+ E+  K + P +VTY++L  GL +  +      L  EM+ 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 361 NDVAADTCTYRTFIDGLC 378
               AD  TY + IDGLC
Sbjct: 403 RGQPADVITYSSLIDGLC 420



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  ++ ++  L K +       LF  +   G+  D+ TYS LI  FC  G++    
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV T+  L+  LC E ++ EA ++   +     +P+VITY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  TY+I+I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P +VTY+SLI G C +        L+ EM D+G   +V++ + +++ LCKNG +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + M   ++RPN FT+  L+DG C  G++   +E+F  + + G   + ++YN++ING
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +CK   +EEAL++ +++   G  P   T+ T+   LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 152/285 (53%), Gaps = 6/285 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++YTY+IL++  CK G+V     +   +L++C  P+V+T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V TY  LING C+      ALNLFKEM   N        P  VTYS +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK G +    +L  +M+      +V+TY+SLI G C     + A  L  +M DQ +
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN+ +  ++++ LCK G++ +A  +   ++      N +TYN +++G C  G +     
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   ME  GC  + F++  +I    K  E ++A  L  ++  +G+
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P + +++ L+  L K+     V  L   +   G   D+ TYS LI+  CK G +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F ++      PN+ TFT L+ GLC   R+ +A  +F  L   G   NV TYN +
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING C+ G    AL +  +M + NG I     PN  T+  II  L K+   DKA++L  Q
Sbjct: 486 INGHCKQGLLEEALTMLSKMED-NGCI-----PNAFTFETIIIALFKKDENDKAEKLLRQ 539

Query: 183 M 183
           M
Sbjct: 540 M 540



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F ILL  L K         +F+ L + G   ++YTY+++IN  CK G +     +
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++  +   PN  TF ++I  L  +    +A  L  ++ A G
Sbjct: 502 LSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  303 bits (777), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 153/378 (40%), Positives = 228/378 (60%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP    F  LL  +AK KHY TVLSL  +++S G+ PD+YT +ILIN FC + 
Sbjct: 141 MLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 199

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  ++L+    P+  TF +LI+GLC E +I EA  LF K    G +P+V+TY 
Sbjct: 200 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 259

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL+NGLC+ G+T  A+ L + M   N       +PN + Y+ IID LCK+  V +A  LF
Sbjct: 260 TLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TY SLIH  C+  +W     LL EMV+  + PNVV  + +++ LCK 
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 373

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M++  V P+  TY  LMDG CL  +++   ++F +M   GC  +  SY
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYC+ + +++A+ L  ++  +G+    VTYNTL HGL  + + + A+ LF EM  
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493

Query: 361 NDVAADTCTYRTFIDGLC 378
           +    D  TYR  +D LC
Sbjct: 494 SGQIPDLVTYRILLDYLC 511



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++      +LF  + + G+ PD++TY+ LI+  C + +      +
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   PNVV F++++  LC E  I  A  +   +   G EP+V+TY  L++G C 
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M +     G V  PN  +Y+I+I+G C+   +DKA  L  QM  + L
Sbjct: 408 RSEMDEAVKVFDTMVHK----GCV--PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTY +LIHG CH      A  L  EMV  G  P++V+  ++++ LCKN  +  A  
Sbjct: 462 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++  +   YN  +DG C  G++   ++LF ++ S G + D  +YNI+I+G C
Sbjct: 522 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L+ ++   G       YNT+  G     +   A +L  EM     +AD  
Sbjct: 582 KRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVS 641

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 642 TTTLIVEML 650



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 6/241 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NIL+    + +  D  + L ++++  GL  D  TY+ LI+  C +G++     +
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ S   P++VT+  L+  LC    + EA  L   ++    + +++ YN  I+G+CR
Sbjct: 488 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 547

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++         +P+  TY+I+I GLCK G +D+A +LF +M     
Sbjct: 548 AGELEAARDLFSNLSSKG------LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +   Y ++I GF  +N+   A  LL EM+ +G   +V ++ +I+  L  +G   +  R
Sbjct: 602 SRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFER 661

Query: 249 L 249
           L
Sbjct: 662 L 662



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F ++      P+ + +  L+  + +  H    L+L  +M +     G+   P+  
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDS----FGI--PPDVY 186

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C    +  A  +  ++      P+  T+ +LI G C      EA  L  + 
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G QP+VV+   +MN LCK G    A RLL  MVQ + RPN   YNT++D  C   ++
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                LF  M + G   D F+YN LI+  C   E +   +L NE+    I P VV ++T+
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L +      A  +   M    V  D  TY   +DG C+R ++
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 99/206 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P+ V +T L+        ++    L  +M   G+ P+V + N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+NTL+ G C+ GKI     LF      G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  +Y  L+NG CK      A+ L   +  K  +P V+ YNT+   L + RQ   A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++ D  TY + I  LC
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALC 336



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  ++A      M+     P+ V    ++  +    KM + S +L L  Q D   + P
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 183

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + +T N L++ FC   ++     +   +  +GC+ D+ ++N LI G C   ++ EAL L+
Sbjct: 184 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 243

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           ++   +G +P VVTY TL +GL ++     A++L   M   +   +   Y T ID LC  
Sbjct: 244 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303

Query: 381 PQV 383
            QV
Sbjct: 304 RQV 306


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  303 bits (777), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 153/378 (40%), Positives = 228/378 (60%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP    F  LL  +AK KHY TVLSL  +++S G+ PD+YT +ILIN FC + 
Sbjct: 103 MLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 161

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  ++L+    P+  TF +LI+GLC E +I EA  LF K    G +P+V+TY 
Sbjct: 162 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 221

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL+NGLC+ G+T  A+ L + M   N       +PN + Y+ IID LCK+  V +A  LF
Sbjct: 222 TLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDRQVTEAFNLF 275

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TY SLIH  C+  +W     LL EMV+  + PNVV  + +++ LCK 
Sbjct: 276 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 335

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M++  V P+  TY  LMDG CL  +++   ++F +M   GC  +  SY
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYC+ + +++A+ L  ++  +G+    VTYNTL HGL  + + + A+ LF EM  
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455

Query: 361 NDVAADTCTYRTFIDGLC 378
           +    D  TYR  +D LC
Sbjct: 456 SGQIPDLVTYRILLDYLC 473



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F ++      P+ + +  L+  + +  H    L+L  +M +     G+   P+  
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDS----FGI--PPDVY 148

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C    +  A  +  ++      P+  T+ +LI G C      EA  L  + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G QP+VV+   +MN LCK G    A RLL  MVQ + RPN   YNT++D  C   ++
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                LF  M + G   D F+YN LI+  C   E +   +L NE+    I P VV ++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L +      A  +   M    V  D  TY   +DG C+R ++
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 99/206 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P+ V +T L+        ++    L  +M   G+ P+V + N+
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+NTL+ G C+ GKI     LF      G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  +Y  L+NG CK      A+ L   +  K  +P V+ YNT+   L + RQ   A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++ D  TY + I  LC
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALC 298



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  ++A      M+     P+ V    ++  +    KM + S +L L  Q D   + P
Sbjct: 89  HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 145

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + +T N L++ FC   ++     +   +  +GC+ D+ ++N LI G C   ++ EAL L+
Sbjct: 146 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 205

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           ++   +G +P VVTY TL +GL ++     A++L   M   +   +   Y T ID LC  
Sbjct: 206 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265

Query: 381 PQV 383
            QV
Sbjct: 266 RQV 268


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  303 bits (777), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 159/396 (40%), Positives = 234/396 (59%), Gaps = 8/396 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP    FN LL  +AK K Y TV SL  +++S G+ PD+YT +ILIN FC + 
Sbjct: 60  MLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLN 118

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  +IL+    P+  TFT+LI+GLC E +I +A  LF K+   G +PNV+TY 
Sbjct: 119 RLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYG 178

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNCQ------PDVVVYTSIIDSLCKDRQVTEAFNLF 232

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TYTSLIH  C+  +W     LL +M++  + P+VV  + +++ LCK 
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 292

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D+M+   V PN  TYN LMDG CL  +++   ++F +M   G   +  SY
Sbjct: 293 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + +++A  L+ E+  K + P  VTYNTL H    + + + A+ LF EM  
Sbjct: 353 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVA 411

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           +    D  TYR  +D LC +  +    A  K   G+
Sbjct: 412 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 447



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 200/370 (54%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF ++   G+ PD++TY+ LI+  C + +      +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+VV F++++  LC E +I EA  +   +   G EPNV+TYN L++G C 
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M + NG     + PN ++Y+ +I+G CK   +DKA  LF +M  + L
Sbjct: 327 QSEMDEAVKVFDTMVH-NG-----YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 380

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +L+H  CH     +A  L  EMV  G  P++ +  ++++ LCK   +D A  
Sbjct: 381 IPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   Y  ++DG C  G++   +++F ++ S G + +  +Y I+ING C
Sbjct: 440 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   ++EA  L+ E+   G  P   TYNT+  GL + ++A RA++L  EM     +AD  
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 559

Query: 369 TYRTFIDGLC 378
           T    ++ LC
Sbjct: 560 TTTLLVEMLC 569



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 163/347 (46%), Gaps = 38/347 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+  L     +  V +L  ++ +  + PD+  +S +++  CK G+++    +
Sbjct: 242 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ +L+ G C +S + EA  +F  +   G  PNVI+YNTLING C+
Sbjct: 302 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 361

Query: 129 TGHTIVALNLFKEMTN---------------------------------GNGEIGVVFKP 155
                 A  LF+EM                                    +G+I     P
Sbjct: 362 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQI-----P 416

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  TY I++D LCK+  +D+A  L   ++  N++P++  YT +I G C A +   A+ + 
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             +  +G++PNV +  +++N LC+ G +D A++L   M      P+  TYNT+  G    
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            +  R  +L   M + G   D  +  +L+   C +K  +    + +E
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 7/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N L+    K +  D    LF+ +    L P+  TY+ L++  C +G++     +
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++ T+  L+  LC +S + EA AL   ++    +P++  Y  +I+G+CR
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A ++F  +++         +PN  TY+I+I+GLC+ G +D+A +LF++M     
Sbjct: 466 AGELEAARDIFSNLSSKG------LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY ++  G     +   A  LL EM+ +G   +V ++ +++  LC +    +  +
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579

Query: 249 LLDLMVQ 255
           +L   VQ
Sbjct: 580 ILSEFVQ 586



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P ++++ ILL  L K  H D  ++L K +    + PD+  Y+I+I+  C+ G++  
Sbjct: 412 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 471

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF  +      PNV T+T +I GLC    + EA  LF ++   GC P+  TYNT+  
Sbjct: 472 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 531

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           GL +    + A+ L +EM      +   F  +  T +++++ LC +      K++ 
Sbjct: 532 GLLQNKEALRAIQLLQEM------LARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P+ V +  L+        +     L  +M   G+ P+V + N+
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ   A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M G  ++ D  TY + I  LC
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLC 255



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 5/194 (2%)

Query: 195 YTSLIHGFCHA-----NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           ++SL H   H+     N  ++A      M+     P+ V  N ++  + K  +      L
Sbjct: 32  FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 91

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            + M    + P+ +T N L++ FC   ++     +   +  +G + D  ++  LI G C 
Sbjct: 92  SNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCV 151

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             ++ +AL L++++  +G +P VVTY TL +GL ++     A++L   M+  +   D   
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211

Query: 370 YRTFIDGLCVRPQV 383
           Y + ID LC   QV
Sbjct: 212 YTSIIDSLCKDRQV 225


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  303 bits (776), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 159/397 (40%), Positives = 231/397 (58%), Gaps = 26/397 (6%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PP    FN LL  +AK KH+ T+LSL  +++S G+ P++YT  ILIN FC + 
Sbjct: 52  MLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F +  +IL+    P+  TFT+LI+G+C E +I EA  LF K+   G  P+V+TY 
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG 170

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L   M   N +      PN   Y+ IID LCK+  V +A  LF
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQ------PNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TY SLIH  C+  +W     LL EMVD  + P+VVS N +++ LCK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D M+Q  V PN  TY  LMDG CL  +++   ++F +M   GC  +  SY
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 301 NILINGYCKNKEV-------------------EEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N LINGYCK + +                   +EA+ +++ +  KG  P V++YNTL +G
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +I++ ++A+ LF EM   ++  DT TY T I GLC
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 197/382 (51%), Gaps = 13/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L     +  V +L   +    + PD+ +++ +++  CK G+V+    +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    PNVVT+T+L+ G C  S + EA  +F  +   GC PNVI+YNTLING C+
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353

Query: 129 TGHTIVALNLFKEMTN-----GNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDK 175
                 A++    M          E   VF         PN ++Y+ +I+G CK   +DK
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A  LF +M  + L P+ VTY++LIHG CH     +A  L  EMV     PN+V+  ++++
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCKN  +  A  LL  +   ++ P+    N  +DG C  G++   ++LF ++ S G + 
Sbjct: 474 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 533

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D ++Y+I+ING C+   ++EA  L+ E+   G       YNT+  G     +  RA++L 
Sbjct: 534 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 593

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            EM     +AD  T   F+  L
Sbjct: 594 QEMVARGFSADASTMTLFVKML 615



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 187/387 (48%), Gaps = 25/387 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++      +LF  + + G+ PD++TY+ LI+  C + +      +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P+VV+F +++  LC E ++ EA  +  K+   G EPNV+TY  L++G C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
                 A+ +F  M            PN ++Y+ +I+G CK   +DKA      M     
Sbjct: 319 LSEMDEAVKVFDTMVCKG------CMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCC 372

Query: 185 YENLN---------------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           Y N++               PNV++Y +LI+G+C     ++A  L  EM  Q + P+ V+
Sbjct: 373 YLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 432

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            + +++ LC   ++ +A  L   MV C   PN  TY  L+D  C    +     L  ++E
Sbjct: 433 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
                 D    NI I+G C+  E+E A  L++ L  KG++P V TY+ + +GL      +
Sbjct: 493 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 552

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDG 376
            A KLF EM  N    + C Y T   G
Sbjct: 553 EASKLFREMDENGCTLNGCIYNTITRG 579



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 188/420 (44%), Gaps = 48/420 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+  +         L LF ++   G  PD+ TY  LIN  CK+G  S    +
Sbjct: 129 PDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +++    PNV  + ++I  LC + ++ EA  LF+++   G  P++ TYN+LI+ LC 
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
                    L  EM +      VV                              +PN VT
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN------------- 206
           Y+ ++DG C    +D+A ++F  M  +   PNV++Y +LI+G+C                
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMD 368

Query: 207 ------DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
                 + +EA  +   MV +G  PNV+S N ++N  CK  ++D A  L   M + ++ P
Sbjct: 369 XXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 428

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  TY+TL+ G C   ++     LF  M +     +  +Y IL++  CKN+ + EA++L 
Sbjct: 429 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 488

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             +    + P +   N    G+    + E A  LF  +    +  D  TY   I+GLC R
Sbjct: 489 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 548



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 118/229 (51%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+TV ++ ++  + K         L  QM    + PN+ T   LI+ FCH N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +++  G QP+  +   ++  +C  GK+  A  L D M+    RP+  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G  +    L  SM    C+ + F+YN +I+  CK+++V EA +L++E+  KGI P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           YN+L H L  + + +    L  EM  + +  D  ++ T +D LC   +V
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 6/284 (2%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A + F ++      P+ + +N L+  + +  H    L+L  +M +     G+   PN  T
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS----FGI--PPNIYT 98

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             I+I+  C    V  A  +  ++      P+  T+T+LI G C      EA  L  +M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G +P+VV+   ++N LCK G    A RLL  MVQ + +PN F YNT++D  C   ++ 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF  M + G   D F+YN LI+  C   E +   +L NE+    I P VV++NT+ 
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L +  +   A  +  +M    V  +  TY   +DG C+  ++
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N L+    K +  D  + LF  +    L PD  TYS LI+  C + ++     +
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN+VT+  L+  LC    + EA AL   ++    +P++   N  I+G+CR
Sbjct: 453 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 512

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++         +P+  TYSI+I+GLC+ G +D+A +LF +M     
Sbjct: 513 AGELEAARDLFSNLSSKG------LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 566

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             N   Y ++  GF   N+ + A  LL EMV +G   +  +  + +  L  +G
Sbjct: 567 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M      P+ V +  L+         +    L  +M   G+ PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  +Y  LING CK      A+ L   +  K  +P V  YNT+   L + RQ   A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++ D  TY + I  LC
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALC 247



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  + A      M+     P+ V  N ++  +    KM + S LL L  Q D   + P
Sbjct: 38  HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPP 94

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N +T + L++ FC   ++     +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M   +   +   Y T ID LC  
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 381 PQV 383
            QV
Sbjct: 215 RQV 217


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 157/378 (41%), Positives = 231/378 (61%), Gaps = 10/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY T +SL  RL   G+ PDL T +ILINCFC MG
Sbjct: 53  MRH----TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ VT  +LIKGLC + ++ +A     KL A G + N ++Y 
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+   +++       G + KP+ V Y+ IID +CK   V +A  LF
Sbjct: 169 TLINGVCKIGDTRAAIKFLRKID------GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLF 222

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ +VVTY +LI+GFC      EA GLL EMV + + PNV + N++++ LCK 
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L +M++  V+P+  TY+TLMDG+ L  ++ + + +F +M  MG   D  +Y
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILING+CKNK V+EAL+L+ E+  K + P +VTY++L  GL +  +      L  EM+ 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 361 NDVAADTCTYRTFIDGLC 378
               AD  TY + IDGLC
Sbjct: 403 RGQPADVITYSSLIDGLC 420



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 195/352 (55%), Gaps = 6/352 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++  + K +       LF  +   G+  D+ TY+ LI  FC +G++    
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV T+  L+  LC E ++ EA ++   +     +P+VITY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  TY+I+I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P +VTY+SLI G C +   +    L+ EM D+G   +V++ + +++ LCKNG +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + M   ++RPN FT+  L+DG C  G++   +E+F  + + G   + ++YN++ING
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +CK   +EEAL++ +++   G  P   T+ T+   LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 6/371 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N L+  L         L    +L + G   +  +Y+ LIN  CK+G       
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIK 185

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +I      P+VV + ++I  +C    + EA  LF+++   G   +V+TYNTLI G C
Sbjct: 186 FLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFC 245

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A+ L  EM      +     PN  TY+I++D LCKEG V +AK +   M    
Sbjct: 246 IVGKLKEAIGLLNEM------VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+V+TY++L+ G+    +  +A+ +   M   GV P+V +  +++N  CKN  +D A 
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M Q ++ P   TY++L+DG C +G+I+ V +L   M   G   D  +Y+ LI+G 
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN  ++ A++L+N++  + I+P + T+  L  GL +  + + A ++F ++       + 
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 368 CTYRTFIDGLC 378
            TY   I+G C
Sbjct: 480 YTYNVMINGHC 490



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 152/285 (53%), Gaps = 6/285 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++YTY+IL++  CK G+V     +   +L++C  P+V+T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V TY  LING C+      ALNLFKEM   N        P  VTYS +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK G +    +L  +M+      +V+TY+SLI G C     + A  L  +M DQ +
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN+ +  ++++ LCK G++ +A  +   ++      N +TYN +++G C  G +     
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   ME  GC  + F++  +I    K  E ++A  L  ++  +G+
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F ILL  L K         +F+ L + G   ++YTY+++IN  CK G +     +
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++  +   PN  TF ++I  L  +    +A  L  ++ A G
Sbjct: 502 LSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 153/378 (40%), Positives = 225/378 (59%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PP +  F+ LL  + + KHY TVLSL+K+++S G+  + YT +ILIN FC + 
Sbjct: 45  MLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 103

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F + G IL+  + P+  TFT+LI+GLC E +I EA  LF K+   G +P+V+TY 
Sbjct: 104 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+   + M   N       +P  V YS IID LCK+  + +A  LF
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNC------RPTVVVYSTIIDSLCKDRQLTEALSLF 217

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + ++PN  TY+SLIHG C    W EA  L   M+ + + P+ ++ N +++ LCK 
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 277

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M+Q D++P+  TYN+LMDG CL  ++ +   +F +M   GC     SY
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISY 337

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LINGYCK + +++A+ L+ E+  +G+ P  VTYNTL HGL  + +   A+ LF EM  
Sbjct: 338 TTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 397

Query: 361 NDVAADTCTYRTFIDGLC 378
                D  TYR   D LC
Sbjct: 398 YGQIPDLVTYRILFDYLC 415



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 192/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K++     LSLF  + + G+ P+ +TYS LI+  C +G       +
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ +TF +L+  LC E  +V+A  +   +     +P+V+TYN+L++G C 
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +N+F  M       G V  P+ ++Y+ +I+G CK   +DKA  LF +M  + L
Sbjct: 312 RSEMGKTVNVFDTMVRK----GCV--PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +LIHG CH     +A  L  EMV  G  P++V+  ++ + LCKN ++  A  
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL ++   ++ P+   Y+ +MDG C  G++   ++LF  + S G   D  +Y I+ING C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + EA  L+ E+   G  P   TYN +  G     +  RA++LF EM     + D  
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545

Query: 369 TYRTFIDGL 377
           T    ++ L
Sbjct: 546 TTTLLVEML 554



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+  L         L LF ++   G  PD+ TY  LIN  CK+G  S     
Sbjct: 122 PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRF 181

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P VV ++++I  LC + ++ EA +LF+ + A G  PN  TY++LI+GLC 
Sbjct: 182 LRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 241

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   A+ LF  M +          P+ +T++ ++D LCKEG V KA  +   M   +L
Sbjct: 242 LGHWKEAIRLFYAMIHRK------IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SL+ G C  ++  +   +   MV +G  P+V+S   ++N  CK   MD A  
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMG 355

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M Q  + P+  TYNTL+ G C  G++     LF  M   G   D  +Y IL +  C
Sbjct: 356 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 415

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  + EA+ L   +    + P +  Y+ +  G+    + E A  LF ++    +  D  
Sbjct: 416 KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 475

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 476 TYTIMINGLC 485



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 12/290 (4%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A +LF ++      P+++ ++ L+  + R  H    L+L+K+M +     G+    N
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS----FGI--PHN 88

Query: 157 TVTYSIIIDGLC---KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           T T +I+I+  C   + GF        L++ Y+   P+  T+T+LI G C      EA  
Sbjct: 89  TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQ---PSTATFTTLIRGLCVEGKIGEALQ 145

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M  +G QP+V++   ++N LCK G    A R L  M Q + RP    Y+T++D  C
Sbjct: 146 LFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC 205

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              ++     LF  M + G   ++F+Y+ LI+G C     +EA+ L+  +  + I P  +
Sbjct: 206 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 265

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           T+NTL   L +     +A  +   M  +D+  D  TY + +DG C+R ++
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 6/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+            +++F  +   G  P + +Y+ LIN +CK+  +     +
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P+ VT+ +LI GLC   R+ +A ALF ++  +G  P+++TY  L + LC+
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L K +   N        P+   YSI++DG+C+ G ++ A++LF ++  + L
Sbjct: 417 NHRLAEAMVLLKVIEGTN------LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TYT +I+G C      EA  L  EM + G  PN  + N+I     +N +   A +
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQ 530

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           L   M+      +  T   L++     G    VK++ 
Sbjct: 531 LFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+    K +  D  + LF+ ++  GL PD  TY+ LI+  C +G++     +
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++VT+  L   LC   R+ EA  L   ++    +P++  Y+ +++G+CR
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF ++++          P+  TY+I+I+GLC++G + +A +LF +M     
Sbjct: 452 AGELEAARDLFSKLSSKG------LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN  TY  +  GF   N+   A  L  EM+ +G   +V ++ +++  L  +G   +  +
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQ 565

Query: 249 LLDLMVQ 255
           +L   VQ
Sbjct: 566 ILCEFVQ 572



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 4/220 (1%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF +M      P++V ++ L+        ++    L  +M   G+  N  + N+
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI    +LF  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  +Y  LING CK      A+     +  +  +PTVV Y+T+   L + RQ   AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCV----RPQVRFTYA 388
            LF +M    ++ +  TY + I GLC+    +  +R  YA
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%)

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRPN 261
            N  ++A  L   M+     P++V  + ++  + +   M + S +L L  Q D   +  N
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITR---MKHYSTVLSLYKQMDSFGIPHN 88

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            +T N L++ FC   ++     +   +  +G +    ++  LI G C   ++ EAL L++
Sbjct: 89  TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
           ++  +G +P V+TY TL +GL ++     A++    M+  +       Y T ID LC   
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208

Query: 382 QV 383
           Q+
Sbjct: 209 QL 210


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 150/378 (39%), Positives = 233/378 (61%), Gaps = 10/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +RH+    PP+  F  +LG L K KHY TV+SL K++ + G+ PDL T SILINCFC +G
Sbjct: 4   LRHI----PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLG 59

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++  F + G+IL+  + PN +   +L+KGLC +  + ++     K+ A G + + ++Y 
Sbjct: 60  QMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYG 119

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L+NGLC+ G T  A+ L + + + +       +P+ V YS IIDGLCK+  VD+A +L+
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRST------RPDVVMYSTIIDGLCKDKLVDEAYDLY 173

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+V+TYT+LI GFC A    EA GLL EM+ + + PN+ + N +++ LCK 
Sbjct: 174 SEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKE 233

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  +  LL +M +  V+P+   Y+ LMDG+CL G++ + K++F+ M   G   D +SY
Sbjct: 234 GKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSY 293

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NI+ING CK K V+EA++L  E+  K + P  VTY++L  GL ++ +    L L  EM  
Sbjct: 294 NIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH 353

Query: 361 NDVAADTCTYRTFIDGLC 378
               A+  TY + +DGLC
Sbjct: 354 RGQPANLVTYNSLLDGLC 371



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 194/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P     N L+  L         L    ++ + G   D  +Y IL+N  CK+G+      +
Sbjct: 78  PNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      P+VV ++++I GLC +  + EA  L++++ A G  P+VITY TLI G C 
Sbjct: 138 LRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCL 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM   N        PN  TY+ +ID LCKEG V ++K L   M  + +
Sbjct: 198 AGQLMEAFGLLNEMILKN------INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y+ L+ G+C   +  +AK + + MV  GV P+V S N+I+N LCK  ++D A  
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMN 311

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+  ++ P+  TY++L+DG C  G+I  + +L   M   G   +  +YN L++G C
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC 371

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN+ +++A++L+ ++  +GI+P   TY  L  GL +  + ++   LF  +       D  
Sbjct: 372 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 432 TYTVMISGLC 441



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+K  D    L+  +N+ G+FPD+ TY+ LI  FC  GQ+   F +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN+ T+ +LI  LC E ++ E+  L   +   G +P+V+ Y+ L++G C 
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M     + GV   P+  +Y+III+GLCK   VD+A  L  +M ++N+
Sbjct: 268 VGEVQKAKQIFLVMV----QTGV--NPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY+SLI G C          L  EM  +G   N+V+ N +++ LCKN  +D A  
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  ++PN +TY  L+DG C  G++ + + LF  +   G   D ++Y ++I+G C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +EAL++ +++   G  P  VT+  +   L E  + ++A KL  EM    +A    
Sbjct: 442 KEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM----IAKGLL 497

Query: 369 TYRTF 373
            +R F
Sbjct: 498 PFRNF 502



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 6/271 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P +I +  ++  L +  H    ++L K+M       G+V  P+ VT SI+I+  C  G +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAK----GIV--PDLVTLSILINCFCHLGQM 61

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             +  +  ++      PN +   +L+ G C   +  ++     ++V QG Q + VS  ++
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N LCK G+   A +LL  +     RP+   Y+T++DG C    ++   +L+  M + G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +Y  LI G+C   ++ EA  L NE+  K I P + TYNTL   L +  + + +  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L   M    V  D   Y   +DG C+  +V+
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQ 272



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  + ++N LL  L KN++ D  ++LF ++   G+ P+ YTY+ LI+  CK G++
Sbjct: 352 HHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             G  +F  +L   +  +V T+T +I GLC E    EA A+ +K++  GC PN +T+  +
Sbjct: 412 KKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEII 471

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L  EM
Sbjct: 472 IRSLLEKDENDKAEKLLHEM 491


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/378 (41%), Positives = 224/378 (59%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PP    FN LL  +AK KH+ T+LSL  +++S G+ P++YT  ILIN FC + 
Sbjct: 52  MLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F +  +IL+    P+  TFT+LI+G+  E +I EA  LF K+   G  P+V+TY 
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYG 170

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G+T  A+ L   M   N +      PN   Y+ IID LCK+  V +A  LF
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQ------PNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P++ TY SLIH  C+  +W     LL EMVD  + P+VVS N +++ LCK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  ++D M+Q  V PN  TY  LMDG CL  +++   ++F +M   GC  +  SY
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + +++A+ L+ E+  + + P  VTY+TL HGL  + + + A+ LF EM  
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404

Query: 361 NDVAADTCTYRTFIDGLC 378
                +  TYR  +D LC
Sbjct: 405 CSQIPNLVTYRILLDYLC 422



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++      +LF  + + G+ PD++TY+ LI+  C + +      +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P+VV+F +++  LC E ++ EA  +  K+   G EPNV+TY  L++G C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M            PN ++Y+ +I+G CK   +DKA  LF +M  + L
Sbjct: 319 LSEMDEAVKVFDTMVCKGC------MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++LIHG CH     +A  L  EMV     PN+V+  ++++ LCKN  +  A  
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+    N  +DG C  G++   ++LF ++ S G + D ++Y+I+ING C
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   ++EA  L+ E+   G       YNT+  G     +  RA++L  EM     +AD  
Sbjct: 493 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 552

Query: 369 TYRTFIDGL 377
           T   F+  L
Sbjct: 553 TMTLFVKML 561



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 117/229 (51%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+TV ++ ++  + K         L  QM    + PN+ T   LI+ FCH N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +++  G QP+  +   ++  +   GK+  A  L D M+    RP+  TY TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G  +    L  SM    C+ + F+YN +I+  CK+++V EA +L++E+  KGI P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           YN+L H L  + + +    L  EM  + +  D  ++ T +D LC   +V
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 6/284 (2%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A + F ++      P+ + +N L+  + +  H    L+L  +M +     G+   PN  T
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS----FGI--PPNIYT 98

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             I+I+  C    V  A  +  ++      P+  T+T+LI G        EA  L  +M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G +P+VV+   ++N LCK G    A RLL  MVQ + +PN F YNT++D  C   ++ 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF  M + G   D F+YN LI+  C   E +   +L NE+    I P VV++NT+ 
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L +  +   A  +  +M    V  +  TY   +DG C+  ++
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N L+    K +  D  + LF  +    L PD  TYS LI+  C + ++     +
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN+VT+  L+  LC    + EA AL   ++    +P++   N  I+G+CR
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  +++         +P+  TYSI+I+GLC+ G +D+A +LF +M     
Sbjct: 459 AGELEAARDLFSNLSSKG------LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 512

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   Y ++  GF   N+ + A  LL EMV +G   +  +  + +  L  +G   +  +
Sbjct: 513 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 572

Query: 249 LLDLMVQ 255
           +L   VQ
Sbjct: 573 ILREFVQ 579



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 93/206 (45%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M      P+ V +  L+         +    L  +M   G+ PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G  + GKI     LF  M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  +Y  LING CK      A+ L   +  K  +P V  YNT+   L + RQ   A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++ D  TY + I  LC
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALC 247



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  + A      M+     P+ V  N ++  +    KM + S LL L  Q D   + P
Sbjct: 38  HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPP 94

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N +T + L++ FC   ++     +   +  +G + D  ++  LI G     ++ EAL L+
Sbjct: 95  NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M   +   +   Y T ID LC  
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214

Query: 381 PQV 383
            QV
Sbjct: 215 RQV 217


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  301 bits (772), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 155/378 (41%), Positives = 225/378 (59%), Gaps = 6/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H  P P  +    +L   +   ++YDTV+SL K++   GL P++YT SILINCF  + 
Sbjct: 88  MLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQ 147

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V L F +  +I++    P +VTFT+LI  LC   +  +A  LF  + A GC P+V TY 
Sbjct: 148 RVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYT 207

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+ G T  A  L K+M     E G   +PN VTYS IID   K+  V++A ++F
Sbjct: 208 TIINGLCKIGETAAAAGLLKKME----EAGC--QPNVVTYSTIIDSHRKDRRVNEALDIF 261

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             MK + ++P++ TY SLI G C+ + W EA  LL EM    + P++V+ NV+++ +CK 
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L  M +  V P+  TY++LM G+ L  ++   ++LF +M + GCK D FSY
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYCK K ++EA  L+NE+  +G+ P  V+YNTL HGL ++     A  LF  M  
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441

Query: 361 NDVAADTCTYRTFIDGLC 378
           N    +  TY   +DG C
Sbjct: 442 NGNLPNLFTYSILLDGFC 459



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 202/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K   +   + LF  + + G  PD+YTY+ +IN  CK+G+ +    +
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +   PNVVT++++I     + R+ EA  +F+ +K  G  P++ TYN+LI GLC 
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM + N        P+ VT+++++D +CKEG V +A+ +   M    +
Sbjct: 286 FSQWKEASALLNEMRSLN------IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+SL++G+   ++  EA+ L   M+ +G +P+V S N+++N  CK  ++D A +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+   + PN  +YNTL+ G C  G +   + LF +M + G   + F+Y+IL++G+C
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     +A  L+  +     KP +V YN L   + +      A KLF E+    +  +  
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQ 519

Query: 369 TYRTFIDGLC 378
            Y T I+GLC
Sbjct: 520 IYTTIINGLC 529



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 8/362 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++    K++  +  L +F  +   G+ PD++TY+ LI   C   Q      +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P++VTF  L+  +C E ++ EA  +   +   G EP+V+TY++L+ G   
Sbjct: 296 LNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL 355

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
               + A  LF  M T G        KP+  +Y+I+I+G CK   +D+AK+LF +M ++ 
Sbjct: 356 RSEVVEARKLFDAMITKG-------CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN V+Y +LIHG C      EA+ L   M   G  PN+ + +++++  CK G    A 
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL   M     +PN   YN L+D  C +G +   ++LF  +   G + +   Y  +ING 
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGL 528

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++EAL  +  +   G  P  ++YN +  G    +   RA++L  EM+     AD 
Sbjct: 529 CKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588

Query: 368 CT 369
            T
Sbjct: 589 GT 590



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 1/230 (0%)

Query: 155 PNTVTYSIIIDGLCKEG-FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           P  + ++ ++  + K G + D    L  QM+   L+PN+ T + LI+ F H    + A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L +++  G+QP +V+   ++N LCK GK   A  L D MV    RP+ +TY T+++G C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+      L   ME  GC+ +  +Y+ +I+ + K++ V EAL +++ +  KGI P + 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           TYN+L  GL    Q + A  L  EM+  ++  D  T+   +D +C   +V
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 69/142 (48%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H + + P + +++ILL    K  ++     LF+ + S    P+L  Y+ILI+  CK G +
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +      PN   +T++I GLC E  + EA   F  ++  GC P+ I+YN +
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVI 559

Query: 123 INGLCRTGHTIVALNLFKEMTN 144
           I G         A+ L  EM +
Sbjct: 560 IRGFLHHKDESRAVQLIGEMRD 581


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  300 bits (768), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 151/378 (39%), Positives = 226/378 (59%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M+P P  V  F   LG +AK K Y + +SL  +++  G+  ++Y+ ++LINC C++ 
Sbjct: 87  MVRMNPRPS-VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     + G++ +    P+ +TF +LI GLC E +I EA  LF ++   G EPNVI+YN
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+ G+TI+A+ +F++M    G      KPN VTY+ IID LCK+  V++A E  
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRG------KPNVVTYNTIIDSLCKDRLVNEAVEFL 259

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+VVTY +++HGFC     NEA  L  EMV + V P+ V+ N++++ LCK 
Sbjct: 260 SEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKE 319

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  + + M +    PNA+TYN LMDG+CL  +++   ++   M   GC  +  SY
Sbjct: 320 GMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSY 379

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYCK+K + EA  L +E+  K + P  VTY+TL  GL ++ +   AL LF EM  
Sbjct: 380 NILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCS 439

Query: 361 NDVAADTCTYRTFIDGLC 378
           + +  D   Y   +DG C
Sbjct: 440 SGLLPDLMAYSILLDGFC 457



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 215/402 (53%), Gaps = 41/402 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S N+L+ CL +  H D  +S+  ++  +G+ PD  T++ LIN  C  G++     +F 
Sbjct: 131 VYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR-- 128
            ++ S   PNV+++ ++I GLC     + A  +F K++    +PNV+TYNT+I+ LC+  
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR 250

Query: 129 ----------------------TGHTIV-----------ALNLFKEMTNGNGEIGVVFKP 155
                                 T +TI+           A  LFKEM      +G    P
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM------VGRNVMP 304

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +TVT++I++DGLCKEG V +A+ +   M  +   PN  TY +L+ G+C  N  +EA  +L
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             M+ +G  PN+ S N+++N  CK+ +M+ A RLL  M + ++ P+  TY+TLM G C  
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+      LF  M S G   D  +Y+IL++G+CK+  ++EAL L  E+  + IKP ++ Y
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             L  G+F   + E A +LF ++  + +  D  TY   I GL
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++  +  +     +   G+ PD+ TY+ +++ FC +GQ++    +
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ VTF  L+ GLC E  + EA  +   +   G EPN  TYN L++G C 
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCL 353

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +   M      IG    PN  +Y+I+I+G CK   +++AK L  +M  +NL
Sbjct: 354 HNQMDEAIKVLGIM------IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++L+ G C      EA  L  EM   G+ P++++ +++++  CK+G +D A +
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  ++PN   Y  L+ G  + GK+   KELF  + + G + D ++YN++I G  
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +EA   + ++   G  P   +YN +  G  + + +  A++L  EM G   +AD+ 
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSS 587

Query: 369 TYRTFID 375
           T++  +D
Sbjct: 588 TFQMLLD 594



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 6/287 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A   F ++      P+V+ +   +  + +      A++L  +M       GV    N
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMD----LFGVTH--N 130

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             + +++I+ LC+   VD A  +  +M    + P+ +T+ +LI+G C+     EA GL  
Sbjct: 131 VYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV  G +PNV+S N ++N LCKNG    A R+   M Q   +PN  TYNT++D  C   
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR 250

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +N   E    M   G   D  +YN +++G+C   ++ EA  L+ E+  + + P  VT+N
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L  GL +      A  +   M       +  TY   +DG C+  Q+
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 43/167 (25%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P +  + IL+  +      +    LF +L++ G+ PD++TY+++I     
Sbjct: 469 LKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI----- 523

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
                                         KGL  E    EA   F K++  G  P+  +
Sbjct: 524 ------------------------------KGLLKEGLSDEAYEFFRKMEDDGFLPDSCS 553

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           YN +I G  +   +  A+ L  EM      +G  F  ++ T+ +++D
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDEM------VGKRFSADSSTFQMLLD 594


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 230/396 (58%), Gaps = 7/396 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP +  F  +L  + K K Y TVLSL ++++S G+  ++YT ++LIN FC + 
Sbjct: 65  MLHMHP-PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLN 123

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V+  F +  +IL+    P+  +FT+LIKGLC E +I EA  LF K+   G +P+V+ Y 
Sbjct: 124 RVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYA 183

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+TGHT  A+ L + M  GN +      P+ V Y  +I  LCK+    +A  LF
Sbjct: 184 TLINGLCKTGHTSAAIRLLRSMEKGNCQ------PDVVVYGTLIHSLCKDRQQTQAFNLF 237

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN+VT  SL++  C+  +W     LL EMVD  + PN +S   +++ LCK 
Sbjct: 238 SEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKE 297

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M Q  V P+  TY  L+DG CL  +++   ++F  M   GC  + FSY
Sbjct: 298 GMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSY 357

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + +++A+ L+ E+  + + P  VTYNTL HGL  + + + A+ LF EM  
Sbjct: 358 NTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA 417

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  TYR  +D LC    +    A  K   G+
Sbjct: 418 CGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+  L K++      +LF  + + G+ P++ T + L+   C +G+      +
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   PN ++ T+++  LC E  + +A  +   +   G EP+V+TY  LI+G C 
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M +          PN  +Y+ +I+G CK   +DKA  LF +M  + L
Sbjct: 332 RSEMDEAVKVFDMMVHKGC------APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LIHG CH     +A  L  EMV  G  P++V+  ++++ LCKN  +D A  
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   ++ P+   Y  ++DG C  G++   ++LF ++ S G K + ++YNI+ +G C
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L+ E+          TYNT+  G     +  RA++L  EM     + D  
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVS 565

Query: 369 T 369
           T
Sbjct: 566 T 566



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 7/335 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N L+  L     +  V +L   +    + P+  + + +++  CK G V+    +
Sbjct: 247 PNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDV 306

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +S   P+VVT+T+LI G C  S + EA  +F  +   GC PNV +YNTLING C+
Sbjct: 307 VDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCK 366

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+EM            PNTVTY+ +I GLC  G +  A  LF +M     
Sbjct: 367 IERMDKAMYLFEEMCRQK------LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQ 420

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY  L+   C     ++A  LL  +    + P++    ++++ +C+ G++++A  
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARD 480

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    ++PN +TYN +  G C  G ++   +LF+ M+   C  D  +YN +  G+ 
Sbjct: 481 LFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFL 540

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +N E   A+ L  E+  +G    V T  TL  G+ 
Sbjct: 541 RNNETSRAIQLLEEMLARGFSCDVST-TTLLVGML 574



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 30/274 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+         D  + +F  +   G  P++++Y+ LIN +CK+ ++     +
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN VT+ +LI GLC   R+ +A ALF ++ A G  P+++TY  L++ LC+
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVV-----------FKPNTVT 159
             H   A+ L K +   N                  GE+               KPN  T
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+  GLCK G +D+A +LF++M     + +  TY ++  GF   N+ + A  LL EM+
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556

Query: 220 DQGVQPNVVSSNVIMNELCKNG-KMDNASRLLDL 252
            +G   +V ++ +++  L  +G     A +L D+
Sbjct: 557 ARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P++V +  ++        ++    L  +M   G+  NV + NV
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   +++ A  +L  +++   +P+  ++ TL+ G CL G+I     LF  M   G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D   Y  LING CK      A+ L   +     +P VV Y TL H L + RQ  +A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM    ++ +  T  + +  LC
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALC 260



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 5/193 (2%)

Query: 195 YTSLIHG-----FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           + SL+H      + H N  ++A      M+     P++V    I+  + K  +      L
Sbjct: 37  FLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSL 96

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M    +  N +T N L++ FC   ++N    +   +  +GC+ D  S+  LI G C 
Sbjct: 97  SRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCL 156

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             ++ EAL L++++ ++G +P VV Y TL +GL +      A++L   M+  +   D   
Sbjct: 157 EGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVV 216

Query: 370 YRTFIDGLCVRPQ 382
           Y T I  LC   Q
Sbjct: 217 YGTLIHSLCKDRQ 229


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/377 (39%), Positives = 238/377 (63%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + PP   FN +LG L K+KHY TVL L +++   G+ P+L   +ILINCFC++G +   F
Sbjct: 81  TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 140

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F +IL+  + P+ +TFT+L KGLC + +I +A     K+ A G   + I+Y TLI+GL
Sbjct: 141 SVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL 200

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G T  AL+L + + +GN     + +PN V Y+ IID +CK   V++A +LF +M  +
Sbjct: 201 CKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            ++P+VVTY++LI GFC      +A  L  +M+ + ++P+V + N+++N  CK+GKM   
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + D+M++  ++PN  TYN+LMDG+CL  ++N+ K +F +M   G   D  SY+I+ING
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK K+ +EA++L+ E+  K I P VVTY++L  GL +  +   AL+L  +M    V  +
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 367 TCTYRTFIDGLCVRPQV 383
            CTY + +D LC   QV
Sbjct: 435 ICTYNSILDALCKTHQV 451



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K K  +    LF  + S G+ PD+ TYS LI+ FC +G++     +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+V TF  L+   C + ++ E   +F  +   G +PN +TYN+L++G C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M  G    GV   P+  +YSI+I+G CK    D+A  LF +M  +N+
Sbjct: 343 VKEVNKAKSIFNTMAQG----GV--NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+SLI G   +   + A  L+ +M D+GV PN+ + N I++ LCK  ++D A  
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL        +P+  TY+ L+ G C +GK+   +++F  +   G   D ++Y I+I G+C
Sbjct: 457 LLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                 EAL+L +++   G  P   TY  +   LF+  + + A KL  EM
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 190/372 (51%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L   L              ++ ++G   D  +Y  LI+  CK+G+      +
Sbjct: 153 PDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL 212

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  +   PNVV + ++I  +C    + EA  LF+++ + G  P+V+TY+ LI+G C 
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCI 272

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF +M   N       KP+  T++I+++  CK+G + + K +F  M  + +
Sbjct: 273 LGKLKDAIDLFNKMILEN------IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY SL+ G+C   + N+AK +   M   GV P++ S ++++N  CK  K D A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M + ++ P+  TY++L+DG   +G+I+   +L   M   G   +  +YN +++  C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V++A++L  +   KG +P + TY+ L  GL +  + E A K+F ++       D  
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506

Query: 369 TYRTFIDGLCVR 380
            Y   I G CV 
Sbjct: 507 AYTIMIQGFCVE 518



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L +R++   + P++  Y+ +I+  CK+  V+  F +F  +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVT+++LI G C   ++ +A  LF K+     +P+V T+N L+N  C+ G  
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                +F  M           KPN VTY+ ++DG C    V+KAK +F  M    +NP++
Sbjct: 312 KEGKTVFDMMMKQG------IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +Y+ +I+GFC    ++EA  L  EM  + + P+VV+ + +++ L K+G++  A +L+D 
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V PN  TYN+++D  C T ++++   L    +  G + D  +Y+ILI G C++ +
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  ++ +L  KG    V  Y  +  G         AL L  +M+ N    D  TY  
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 373 FIDGL 377
            I  L
Sbjct: 546 IILSL 550



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 170/320 (53%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+            + LF ++    + PD+YT++IL+N FCK G++  G  +
Sbjct: 258 PDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    PN VT+ SL+ G C    + +A ++F  +   G  P++ +Y+ +ING C+
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+NLFKEM   N        P+ VTYS +IDGL K G +  A +L  QM    +
Sbjct: 378 IKKFDEAMNLFKEMHRKN------IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY S++   C  +  ++A  LL +  D+G QP++ + ++++  LC++GK+++A +
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + ++      + + Y  ++ GFC+ G  N    L   ME  GC  D  +Y I+I    
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551

Query: 309 KNKEVEEALSLYNELPFKGI 328
           K  E + A  L  E+  +G+
Sbjct: 552 KKDENDMAEKLLREMIARGL 571



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++I++    K K +D  ++LFK ++   + PD+ TYS LI+   K G++S    +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN+ T+ S++  LC   ++ +A AL TK K  G +P++ TY+ LI GLC+
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  +F+++      + V        Y+I+I G C EG  ++A  L  +M+    
Sbjct: 483 SGKLEDARKVFEDLLVKGYNLDVY------AYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            P+  TY  +I      ++ + A+ LL EM+ +G+  N
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 108/231 (46%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K N ++YS           VD A  LF ++   N  P    +  ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M  +G++PN+V+ N+++N  C+ G +  A  +   +++    P+  T+ TL  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           L G+I +       + ++G   D  SY  LI+G CK  E   AL L   +    ++P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            YNT+   + +++    A  LF EM    ++ D  TY   I G C+  +++
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLK 277



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N +L  L K    D  ++L  +    G  PD+ TYSILI   C+ G++
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   +  +V  +T +I+G C E    EA AL +K++  GC P+  TY  +
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L +     +A  L +EM
Sbjct: 547 ILSLFKKDENDMAEKLLREM 566



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y +   N ++Y+S    F   ND ++A  L   ++ +   P     N I+  L K+    
Sbjct: 43  YSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYH 102

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               L   M    ++PN    N L++ FC  G I     +F  +  MG   D  ++  L 
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLS 162

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++++A   ++++   G     ++Y TL HGL ++ +   AL L   + GN V 
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 365 ADTCTYRTFIDGLC 378
            +   Y T ID +C
Sbjct: 223 PNVVMYNTIIDSMC 236


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  298 bits (763), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 151/377 (40%), Positives = 238/377 (63%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + PP   FN +LG L K+KHY TVL L +++   G+ P+L   +ILINCFC++G +   F
Sbjct: 81  TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 140

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F +IL+  + P+ +TFT+LIKGLC + +I +A     K+ A G   + I+Y TLI+GL
Sbjct: 141 SVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL 200

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G T  AL+L + + +GN     + +PN V Y+ IID +CK   V++A +LF +M  +
Sbjct: 201 CKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            ++P+VVTY++LI GFC     N+A  L  +M+ + ++P+V + N+++N  CK+GKM   
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + D+M++  ++PN  TYN+LMDG+CL  ++N+ K +F +M   G   D  SY+I+ING
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK K+ +EA++L+ E+  K I P VVTY++L  GL +  +   AL+L  +M    V   
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434

Query: 367 TCTYRTFIDGLCVRPQV 383
             TY + +D LC   QV
Sbjct: 435 IRTYNSILDALCKIHQV 451



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K K  +    LF  + S G+ PD+ TYS LI+ FC +G+++    +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+V TF  L+   C + ++ E   +F  +   G +PN +TYN+L++G C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M  G    GV   P+  +YSI+I+G CK    D+A  LF +M  +N+
Sbjct: 343 VKEVNKAKSIFNTMAQG----GV--NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+SLI G   +   + A  L+ +M D+GV P + + N I++ LCK  ++D A  
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIA 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    ++PN +TY+ L+ G C +GK+   +++F  +   G   +  +Y I+I G+C
Sbjct: 457 LLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                 EAL+L +++   G  P   TY  +   LF+  + + A KL  EM
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 174/322 (54%), Gaps = 6/322 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+         +  + LF ++    + PD+YT++IL+N FCK G++  G  +
Sbjct: 258 PDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    PN VT+ SL+ G C    + +A ++F  +   G  P++ +Y+ +ING C+
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+NLFKEM   N        P+ VTYS +IDGL K G +  A +L  QM    +
Sbjct: 378 IKKFDEAMNLFKEMHRKN------IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + TY S++   C  +  ++A  LL ++ D+G+QPN+ + ++++  LC++GK+++A +
Sbjct: 432 PPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARK 491

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + ++      N  TY  ++ GFC+ G  N    L   ME  GC  D  +Y I+I    
Sbjct: 492 VFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551

Query: 309 KNKEVEEALSLYNELPFKGIKP 330
           K  E + A  L  E+  +G++P
Sbjct: 552 KKDENDMAEKLLREMIARGVRP 573



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L +R++   + P++  Y+ +I+  CK+  V+  F +F  +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVT+++LI G C   ++ +A  LF K+     +P+V T+N L+N  C+ G  
Sbjct: 252 ISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                +F  M           KPN VTY+ ++DG C    V+KAK +F  M    +NP++
Sbjct: 312 KEGKTVFDMMMKQG------IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +Y+ +I+GFC    ++EA  L  EM  + + P+VV+ + +++ L K+G++  A +L+D 
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V P   TYN+++D  C   ++++   L   ++  G + + ++Y+ILI G C++ +
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  ++  L  KG    V TY  +  G         AL L  +M+ N    D  TY  
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 373 FIDGL 377
            I  L
Sbjct: 546 IILSL 550



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++I++    K K +D  ++LFK ++   + PD+ TYS LI+   K G++S    +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P + T+ S++  LC   ++ +A AL TKLK  G +PN+ TY+ LI GLC+
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  +F+ +      +      N  TY+I+I G C EG  ++A  L  +M+    
Sbjct: 483 SGKLEDARKVFEGLLVKGHNL------NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
            P+  TY  +I      ++ + A+ LL EM+ +GV+P  ++
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 106/226 (46%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K N ++YS           VD A  LF ++   N  P    +  ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M  +G++PN+V+ N+++N  C+ G +  A  +   +++    P+  T+ TL+ G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           L G+I +       + ++G   D  SY  LI+G CK  E   AL L   +    ++P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            YNT+   + +++    A  LF EM    ++ D  TY   I G C+
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI 272



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N +L  L K    D  ++L  +L   G+ P++YTYSILI   C+ G++
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      NV T+T +I+G C E    EA AL +K++  GC P+  TY  +
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L +     +A  L +EM
Sbjct: 547 ILSLFKKDENDMAEKLLREM 566



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y +   N ++Y+S    F   ND ++A  L   ++ +   P     N I+  L K+    
Sbjct: 43  YSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYH 102

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               L   M    ++PN    N L++ FC  G I     +F  +  MG   D  ++  LI
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++++A   ++++   G     ++Y TL HGL ++ +   AL L   + GN V 
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 365 ADTCTYRTFIDGLC 378
            +   Y T ID +C
Sbjct: 223 PNVVMYNTIIDSMC 236



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%)

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N  +Y++    F     ++    LF  +         F +N ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            ++ F+GIKP +V  N L +   ++     A  +F ++       DT T+ T I GLC++
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 381 PQVR 384
            Q++
Sbjct: 169 GQIQ 172


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  296 bits (759), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 220/370 (59%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F   LG  AK K Y TV+SL  +++   +  ++Y+ +ILINC C++  V     +
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++ +    P+ +TF +LI GLC E +I EA  LF ++   G EPNVI+Y T+INGLC+
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG+T +A+++FK+M   NG      KPN VTYS IID LCK+  V+ A E   +M    +
Sbjct: 211 TGNTSMAVDVFKKMEQ-NG-----CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY S++HGFC+    NEA  L  EMV + V PN V+  ++++ LCK G +  A  
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARL 324

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M +  V P+  TYN LMDG+CL   +N  K++F  M   GC     SYNILINGYC
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ ++EA SL  E+  K + P  VTY+TL  GL ++ + + AL LF EM       +  
Sbjct: 385 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444

Query: 369 TYRTFIDGLC 378
           TY   +DG C
Sbjct: 445 TYVILLDGFC 454



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 41/402 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S NIL+ CL +  H D  +S+  ++  +G+ PD  T++ LIN  C  G++     +F 
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR-- 128
            +++    PNV+++T++I GLC       A  +F K++  GC+PNV+TY+T+I+ LC+  
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247

Query: 129 ----------------------TGHTIV-----------ALNLFKEMTNGNGEIGVVFKP 155
                                 T ++IV           A  LFKEM      +G    P
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM------VGRDVMP 301

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           NTVT++I++DGLCKEG V +A+ +F  M  + + P++ TY +L+ G+C     NEAK + 
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             M+ +G  P   S N+++N  CK+ +MD A  LL  M    + P+  TY+TLM G C  
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+      LF  M S G   +  +Y IL++G+CK+  ++EAL L   +  K ++P +V Y
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHY 481

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             L  G+F   + E A +LF ++ G+    D  TY   I GL
Sbjct: 482 TILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K++  +  +     +   G+ P+++TY+ +++ FC +GQ++    +
Sbjct: 231 PNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN VTFT L+ GLC E  + EA  +F  +   G EP++ TYN L++G C 
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCL 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M            P   +Y+I+I+G CK   +D+AK L  +M ++ L
Sbjct: 351 QRLMNEAKKVFEIMIRKGC------APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+ VTY++L+ G C      EA  L  EM   G  PN+V+  ++++  CK+G +D A +
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + PN   Y  L++G  + GK+   KELF  +   G + D  +Y ++I G  
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +EA  L+ ++   G  P   +YN +  G  + + +  A++L  EM G   + +  
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLS 584

Query: 369 TYRTFID 375
           T++  +D
Sbjct: 585 TFQMLLD 591



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 165/332 (49%), Gaps = 6/332 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N ++         +    LFK +    + P+  T++IL++  CK G VS   +
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARL 324

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ +L+ G C +  + EA  +F  +   GC P   +YN LING C
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++     A +L  EM +          P+TVTYS ++ GLC+ G   +A  LF +M    
Sbjct: 385 KSRRMDEAKSLLAEMYHK------ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PN+VTY  L+ GFC     +EA  LL  M ++ ++PN+V   +++  +   GK++ A 
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   +     RP+  TY  ++ G    G  +   +LF  ME  G   +  SYN++I G+
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
            +N++   A+ L +E+  K     + T+  L 
Sbjct: 559 LQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 118/225 (52%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P+ V +   +    K+        L  QM    +  NV +   LI+  C  N  + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L +M   G+ P+ ++ N ++N LC  GK+  A  L + MV+    PN  +Y T+++G C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            TG  +   ++F  ME  GCK +  +Y+ +I+  CK++ V +A+   +E+  +GI P V 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN++ HG   + Q   A +LF EM G DV  +T T+   +DGLC
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 10/284 (3%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A A F ++      P+V+ +   +    +       ++L  +M         +F+    
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMD--------LFRVTHN 127

Query: 159 TYS--IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            YS  I+I+ LC+   VD +  +  +M    ++P+ +T+ +LI+G C+     EA  L  
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV +G +PNV+S   ++N LCK G    A  +   M Q   +PN  TY+T++D  C   
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +N   E    M   G   + F+YN +++G+C   ++ EA  L+ E+  + + P  VT+ 
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            L  GL +      A  +F  M    V  D  TY   +DG C++
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQ 351


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/370 (41%), Positives = 228/370 (61%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+  FN +L   AK KHY T +SL  RL   G+ PDL+T +ILINCFC MGQ++ GF +
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +IL+  + P+ VT  +LIKGLC + ++ +A     KL A G + N ++Y TLING+C+
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+ L +++       G + KPN   YS IID LCK   V +A  LF +M  + +
Sbjct: 425 IGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +VVTY++LI+GFC      EA GLL EMV + + P+V +  ++++ L K GK+  A  
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +M++  V+P+ FTYNTLM+G+ L  ++ + + +F +M  MG   D  +Y ILING+C
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K V+EAL+L+ E+  K + P  VTY++L  GL +  +      L  EM+     AD  
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 369 TYRTFIDGLC 378
           TY + IDGLC
Sbjct: 659 TYNSLIDGLC 668



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 186/326 (57%), Gaps = 7/326 (2%)

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           ++   +  +IL+  + P+ VT  +LIKGLC + ++ EA     KL A G + N ++Y TL
Sbjct: 45  AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATL 104

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING+CR G T  A+   +++       G + KPN   Y+ IID LCK   V +A  LF +
Sbjct: 105 INGVCRIGDTRAAIKFLRKID------GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++ NVVTY++LI+GFC      EA GLL  MV + + PNV + N++++ LCK GK
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +L +M++  V+ N  TY+TLMDG+ L  ++ + + +F +M  MG   D  SYNI
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +ING+CK K V++AL+L+ E+      P ++ +N +     +++    A+ L   ++   
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 337

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTYA 388
           +  D  T    I+  C   Q+ F ++
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFS 363



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  ++ ++  L K +       LF  +   G+  D+ TYS LI  FC +G++    
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P+V T+T L+  L  E ++ EA ++   +     +P+V TYNTL+NG 
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  TY+I+I+G CK   VD+A  LF +M  +
Sbjct: 563 LLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P+ VTY+SL+ G C +   +    L+ EM D+G   +V++ N +++ LCKNG +D A
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + M    +RPN FT+  L+DG C  G++   +E+F  + + G   D + YN++I G
Sbjct: 677 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYG 736

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +CK   +EEAL++ +++   G  P  VT++ + + LF+  + ++A KL  +M
Sbjct: 737 HCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 186/405 (45%), Gaps = 41/405 (10%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N L+  L         L    +L + G   +  +Y+ LIN  CK+G       
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +I      PNV  ++++I  LC    + EA  LF+++   G   +V+TY+TLI G C
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD------------- 174
             G    A+ L  EM      +     P+  TY+I++D L KEG V              
Sbjct: 494 IVGKLKEAIGLLNEM------VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC 547

Query: 175 ----------------------KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
                                 KA+ +F  M    + P+V TYT LI+GFC +   +EA 
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM  + + P+ V+ + +++ LCK+G++     L+D M       +  TYN+L+DG 
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G +++   LF  M+  G + + F++ IL++G CK   +++A  ++ +L  KG    V
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDV 727

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             YN + +G  +    E AL +  +M+ N    +  T+   I+ L
Sbjct: 728 YIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 151/285 (52%), Gaps = 6/285 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+ TY+IL++   K G+V     +   +L++C  P+V T+ +L+ G      + +A  +
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V TY  LING C++     ALNLFKEM   N        P+TVTYS +
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN------MVPDTVTYSSL 628

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +DGLCK G +    +L  +M+      +V+TY SLI G C     ++A  L  +M DQG+
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN  +  ++++ LCK G++ +A  +   ++      + + YN ++ G C  G +     
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   ME  GC  +  +++I+IN   K  E ++A  L  ++  +G+
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 174/371 (46%), Gaps = 7/371 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N L+  L         L    +L + G   +  +Y+ LIN  C++G       
Sbjct: 60  PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +I      PNV  + ++I  LC    + EA  LF+++   G   NV+TY+TLI G C
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    AL L   M      +     PN  TY+I++D LCKEG V +AK +   M    
Sbjct: 180 IVGKLKEALGLLNVM------VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  NV+TY++L+ G+    +  +A+ +   M   GV P+V S N+++N  CK  ++D A 
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M+     P    +N ++D F      +    L   +E  G + D F+ NILIN +
Sbjct: 294 NLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCF 352

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   ++    S+  ++  +G  P+ VT NTL  GL    Q ++AL    ++       + 
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 368 CTYRTFIDGLC 378
            +Y T I+G+C
Sbjct: 413 VSYATLINGVC 423



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 186/378 (49%), Gaps = 7/378 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++  L K +       LF  +   G+  ++ TYS LI  FC +G++    
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV T+  L+  LC E ++ EA ++   +     + NVITY+TL++G 
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGY 248

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                   A ++F  M+     +GV   P+  +Y+I+I+G CK   VDKA  LF +M   
Sbjct: 249 FLVYEVKKAQHVFNAMS----LMGVT--PDVHSYNIMINGFCKIKRVDKALNLFKEMILS 302

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P ++ +  ++  F     ++ A  L   +  +G+QP++ + N+++N  C  G++   
Sbjct: 303 RF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L  +++    P+  T NTL+ G CL G++ +       + + G + +  SY  LING
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK  +   A+ L  ++  +  KP V  Y+T+   L + +    A  LF EM    ++AD
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY T I G C+  +++
Sbjct: 482 VVTYSTLIYGFCIVGKLK 499



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 27/363 (7%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++ TY+IL++  CK G+V     +   +L++C   NV+T+++L+ G      + +A  +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V +YN +ING C+      ALNLFKEM            P  + ++ I
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-------PPIIQFNKI 313

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +D   K      A  L  +++ + + P++ T   LI+ FCH         +L +++ +G 
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+ V+ N ++  LC  G++  A    D ++    + N  +Y TL++G C  G      +
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   ++    K +   Y+ +I+  CK + V EA  L++E+  KGI   VVTY+TL +G  
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL-------------------CVRPQVR 384
            + + + A+ L  EM    +  D  TY   +D L                   CV+P V 
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV- 552

Query: 385 FTY 387
           FTY
Sbjct: 553 FTY 555



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 35/140 (25%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P  V ++N L+  L KN H D  ++LF ++   G+ P+ +T++IL++  CK G++    
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712

Query: 67  VIFGRILRSCF-----------------------------------APNVVTFTSLIKGL 91
            +F  +L   +                                    PN VTF  +I  L
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772

Query: 92  CAESRIVEAAALFTKLKAFG 111
             +    +A  L  ++ A G
Sbjct: 773 FKKDENDKAEKLLRQMIARG 792


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 153/378 (40%), Positives = 228/378 (60%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M+P P  V  F   LG +AK K Y TV+SL  +++  G+  ++Y+ +ILINC C++ 
Sbjct: 83  MLRMNPRPS-VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN 141

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     + G++ +    P+ +TF +LI G C E  I EA  LF ++   G +P+VI+Y+
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC++G+T +AL L ++M     E G   KPN V Y+ IID LCK+  V+ A +L 
Sbjct: 202 TVINGLCKSGNTSMALQLLRKME----EKGC--KPNLVAYTTIIDSLCKDTLVNDAMDLL 255

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+VVTY++++HGFC     NEA  L  EMV + V PN V+  ++++ LCK 
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  + + M +    PNA+TYN LMDG+CL  +++  +++   M   GC     SY
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILINGYCK + ++EA SL  E+  K + P  VTY+TL  GL ++ + + AL LF EM  
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435

Query: 361 NDVAADTCTYRTFIDGLC 378
           + +  D  TY T +DGLC
Sbjct: 436 SGLLPDLMTYSTLLDGLC 453



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++  L K+   +  + L   +   G+ PD+ TYS +++ FC +G ++   ++
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN VTFT L+ GLC E  + EA  +F  +   G EPN  TYN L++G C 
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +   M +          P   +Y+I+I+G CK   +D+AK L ++M  + L
Sbjct: 350 NNQMDEAQKVLDIMVDKGC------APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++L+ G C      EA  L  EM   G+ P++++ + +++ LCK+G +D A +
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + P+   YN L++G  + GK+   KELF  + + G +    +Y I+I G  
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +EA  L+ ++   G  P   +YN +  G  + + +  A++L  EM G   +AD+ 
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSS 583

Query: 369 TYRTFID 375
           T++  +D
Sbjct: 584 TFQMLLD 590



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 188/364 (51%), Gaps = 43/364 (11%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+LR    P+VV F   +  +  + +     +L  ++  FG   NV + N LIN LCR
Sbjct: 80  FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H + A+++  +M     ++G+  +P+ +T++ +I+G C EG + +A  LF +M     
Sbjct: 140 LNHVVFAISVLGKMF----KLGI--QPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++Y+++I+G C + + + A  LL +M ++G +PN+V+   I++ LCK+  +++A  
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-------------------- 288
           LL  MV   + P+  TY+T++ GFC  G +N    LF  M                    
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 289 ------------ESM---GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                       E+M   G + + ++YN L++GYC N +++EA  + + +  KG  P V 
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRK 391
           +YN L +G  + R+ + A  L VEM   ++  DT TY T + GLC   RPQ      +  
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433

Query: 392 GNSG 395
            +SG
Sbjct: 434 CSSG 437


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/378 (41%), Positives = 223/378 (58%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M+P P  V+ F   LG  AK K Y TV+SL  +++  G+  ++Y+ ++LINC C++ 
Sbjct: 79  MVRMNPRPS-VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN 137

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     I G++ +    P   TF +LI GLC E +I EA  LF ++   G EPNVI+YN
Sbjct: 138 HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+TG+T +A+++FK+M   NG      KP+ VTY+ IID LCK+  V+ A E  
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + PNV TY  ++HGFC     NEA  L  EMV + V P+ V+  ++++ LCK 
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKE 311

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  + + M +  V PN  TYN LMDG+CL   +N  K++F  M   GC     SY
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILING+CK++ ++EA SL  E+  K + P  VTY+TL  GL +  + + AL +F EM  
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431

Query: 361 NDVAADTCTYRTFIDGLC 378
             +  +  TY   +DG C
Sbjct: 432 YGLLPNLVTYSILLDGFC 449



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++  +  +     +   G+ P+++TY+ +++ FC +GQ++    +
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ VT T L+ GLC E  + EA  +F  +   G EPN+ TYN L++G C 
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M      I     P   +Y+I+I+G CK   +D+AK L  +M ++ L
Sbjct: 346 QRLMNEAKKVFEIM------IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+ VTY++L+ G C      EA  +  EM   G+ PN+V+ +++++  CK+G +D A +
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + PN   +  L++G  + GK+   KELF  + + G +    +Y ++I G  
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +EA  L+ ++   G  P   +YN +  G  + + +  A++L  EM G   +A+  
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLS 579

Query: 369 TYRTFID 375
           T++  +D
Sbjct: 580 TFQMLLD 586



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 6/284 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A A F ++      P+V  +   +    +       ++L  +M       GV    N
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMD----LFGVTH--N 122

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             + +++I+ LC+   VD A  +  +M    ++P   T+ +LI+G C+     EA  L  
Sbjct: 123 VYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFN 182

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV +G +PNV+S N I+N LCK G    A  +   M Q   +P+  TYNT++D  C   
Sbjct: 183 EMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDR 242

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +N   E    M   G   + F+YN +++G+C   ++ EA  L+ E+  + + P  VT  
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLT 302

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            L  GL +      A  +F  M    V  +  TY   +DG C++
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQ 346



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 70/139 (50%)

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           N  +D+A      MV+ + RP+   +   +  F    + + V  L   M+  G  H+ +S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            N+LIN  C+   V+ A+S+  ++   GI PT  T+N L +GL    + + A++LF EM 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 +  +Y T I+GLC
Sbjct: 186 RRGHEPNVISYNTIINGLC 204


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  294 bits (752), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 156/378 (41%), Positives = 222/378 (58%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP   FN +L  L  NKHY TV+SLFK+    G+ PDL T SILINCFC   
Sbjct: 48  MLLMRP-PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 106

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++L F +F  IL+  F PN +T  +LIKGLC    I +A     +L A G + + ++Y 
Sbjct: 107 HITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYG 166

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+TG T     L +++       G   KP+ V Y+ II+ LCK   +  A +++
Sbjct: 167 TLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P+VVTYT+LIHGFC      EA  LL EM  + + PNV + N++++ L K 
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GKM  A  LL +M++  ++P+ FTYN+L+DG+ L  ++   K +F SM   G   D   Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +ING CK K V+EA+SL+ E+  K + P +VTYN+L  GL +    ERA+ L   M+ 
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 361 NDVAADTCTYRTFIDGLC 378
             +  D  +Y   +DGLC
Sbjct: 401 QGIQPDVYSYTILLDGLC 418



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 177/346 (51%), Gaps = 6/346 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K      V  L ++L    + PD+  Y+ +IN  CK   +     ++  +
Sbjct: 164 SYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 223

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVT+T+LI G C    + EA +L  ++K     PNV T+N LI+ L + G  
Sbjct: 224 IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKM 283

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L   M           KP+  TY+ +IDG      V  AK +F  M    + P+V
Sbjct: 284 KEAKILLAVMMKA------CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             YT++I+G C     +EA  L  EM  + + P++V+ N +++ LCKN  ++ A  L   
Sbjct: 338 QCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++P+ ++Y  L+DG C +G++   KE+F  + + G   +  +Y +LIN  CK   
Sbjct: 398 MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGF 457

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +EAL L +++  KG  P  VT++ +   LFE  + ++A K+  EM
Sbjct: 458 FDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 179/376 (47%), Gaps = 9/376 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R  HP+     + N L+  L         L    +L + G   D  +Y  LIN  CK G+
Sbjct: 121 RGFHPN---AITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGE 177

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                 +  ++      P+VV + ++I  LC    + +A  +++++   G  P+V+TY T
Sbjct: 178 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTT 237

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C  GH   A +L  EM   N        PN  T++I+ID L KEG + +AK L  
Sbjct: 238 LIHGFCIMGHLKEAFSLLNEMKLKN------INPNVCTFNILIDALSKEGKMKEAKILLA 291

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M    + P+V TY SLI G+   ++   AK +   M  +GV P+V     ++N LCK  
Sbjct: 292 VMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D A  L + M   ++ P+  TYN+L+DG C    + R   L   M+  G + D +SY 
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYT 411

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           IL++G CK+  +E+A  ++  L  KG    V  Y  L + L +    + AL L  +M+  
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471

Query: 362 DVAADTCTYRTFIDGL 377
               D  T+   I  L
Sbjct: 472 GCMPDAVTFDIIIRAL 487



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 6/324 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V  +N ++  L KNK       ++  +   G+ PD+ TY+ LI+ FC MG +  
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKE 250

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +      PNV TF  LI  L  E ++ EA  L   +     +P+V TYN+LI+
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G         A  +F  M     + GV   P+   Y+ +I+GLCK   VD+A  LF +MK
Sbjct: 311 GYFLVDEVKHAKYVFYSM----AQRGVT--PDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           ++N+ P++VTY SLI G C  +    A  L   M +QG+QP+V S  ++++ LCK+G+++
Sbjct: 365 HKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLE 424

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   ++      N   Y  L++  C  G  +   +L   ME  GC  D  +++I+I
Sbjct: 425 DAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIII 484

Query: 305 NGYCKNKEVEEALSLYNELPFKGI 328
               +  E ++A  +  E+  +G+
Sbjct: 485 RALFEKDENDKAEKILREMIARGL 508



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 6/308 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           + P  +   +L     +      A A F  +      P    +N +++ L    H    +
Sbjct: 18  YPPIAIPTATLHSQPHSHHHHHHAVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVI 77

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +LFK+    NG       P+  T SI+I+  C +  +  A  +F  +     +PN +T  
Sbjct: 78  SLFKQF-EPNG-----ITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLN 131

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LI G C   +  +A     ++V QG Q + VS   ++N LCK G+    +RLL  +   
Sbjct: 132 TLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGH 191

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            V+P+   YNT+++  C    +    +++  M   G   D  +Y  LI+G+C    ++EA
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            SL NE+  K I P V T+N L   L +  + + A  L   M    +  D  TY + IDG
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311

Query: 377 LCVRPQVR 384
             +  +V+
Sbjct: 312 YFLVDEVK 319



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P    + +++    +   +     L  +    G+ P++ + ++++N  C    +  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              +++    PNA T NTL+ G C  G+I +       + + G + D  SY  LING CK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             E +    L  +L    +KP VV YNT+ + L + +    A  ++ EM    ++ D  T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 370 YRTFIDGLCVRPQVRFTYA 388
           Y T I G C+   ++  ++
Sbjct: 235 YTTLIHGFCIMGHLKEAFS 253


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/375 (39%), Positives = 223/375 (59%), Gaps = 7/375 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           MHP P  V  FN++LG + K KHY T +SL K++   G+ P + T SILINC+C +G + 
Sbjct: 72  MHPLPS-VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMG 130

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F + G +L+  +  N +T T+++KGLC    + +A      + A G   + +TY TLI
Sbjct: 131 FAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLI 190

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC+ G T  A  L  +M       G V +PN V Y++I+DGLCK+G V +A++L+  +
Sbjct: 191 NGLCKIGLTREAFELLHKME------GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDV 244

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               ++P+V TYT LIHGFC    W E   LL +MVD+ V  NV + N++++ LCK G +
Sbjct: 245 VGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGML 304

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  + +LM++   RP+  T+NTLM G+CL   +   ++LF +    G   D +SYNIL
Sbjct: 305 GKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNIL 364

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I GYCKN  ++EALSL+N++ +K + P +VTY++L  GL +  +   A +LF  +     
Sbjct: 365 IIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGP 424

Query: 364 AADTCTYRTFIDGLC 378
           + +  TY   +D LC
Sbjct: 425 SPNVITYNIMLDALC 439



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 188/347 (54%), Gaps = 6/347 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D  TY  LIN  CK+G     F +  ++      PNVV +  ++ GLC +  + EA
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L++ +   G +P+V TY  LI+G C  G       L  +M + N  +      N  TY
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL------NVYTY 291

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +I+ID LCK+G + KA ++   M      P++VT+ +L+ G+C  ND  EA+ L     +
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ P+V S N+++   CKN ++D A  L + M    + PN  TY++L+DG C +G+I+ 
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             ELF ++   G   +  +YNI+++  CK + V++A+ L+N +  +G+ P V +YN L +
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           G  + ++ + A+ LF EM   ++  D+ TY   IDGLC   ++   +
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 177/340 (52%), Gaps = 6/340 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+++  L K+        L+  +   G+ PD++TY+ LI+ FC +GQ      +
Sbjct: 216 PNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRL 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      NV T+  LI  LC +  + +A  +   +   G  P+++T+NTL++G C 
Sbjct: 276 LCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCL 335

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  LF        E G+   P+  +Y+I+I G CK   +D+A  LF +M Y+ L
Sbjct: 336 YNDVVEARKLFDTF----AECGIT--PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKL 389

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTY+SLI G C +   + A  L   + D G  PNV++ N++++ LCK   +D A  
Sbjct: 390 APNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIE 449

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +LM +  + PN  +YN L++G+C + +I+    LF  M       D  +YN LI+G C
Sbjct: 450 LFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           K+  +  A  L+N +   G    V+TYN LF    +I+  
Sbjct: 510 KSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 158/355 (44%), Gaps = 64/355 (18%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN---------- 146
           I +A ALFT+L      P+V+ +N ++  + +  H   A++L K+M              
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 147 --------GEIGVVF-----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                   G +G  F           + N +T + I+ GLC  G V KA E    +  + 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA- 246
              + VTY +LI+G C      EA  LL +M  Q V+PNVV  N+I++ LCK+G +  A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 247 ----------------------------------SRLLDLMVQCDVRPNAFTYNTLMDGF 272
                                             +RLL  MV  +V  N +TYN L+D  
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G + +  ++   M   G + D  ++N L++GYC   +V EA  L++     GI P V
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            +YN L  G  +  + + AL LF +M    +A +  TY + IDGLC   ++ + +
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 2/218 (0%)

Query: 169 KEGF--VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           K GF  +D A  LF ++   +  P+VV +  ++        +  A  L  +M  +G+ P+
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           +V+ ++++N  C  G M  A  +L ++++   + NA T  T+M G C+ G++ +  E   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           S+ + G   D+ +Y  LING CK     EA  L +++  + ++P VV YN +  GL +  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               A  L+ ++ G  +  D  TY   I G C   Q R
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWR 270



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V ++NI+L  L K +  D  + LF  +   GL P++ +Y+ILIN +CK  ++   
Sbjct: 424 PSPN-VITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F  + R    P+ VT+  LI GLC   RI  A  LF  +   G   +VITYN L + 
Sbjct: 483 MNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDA 542

Query: 126 LCRTGHTI 133
             +  H I
Sbjct: 543 FSKIQHVI 550


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 149/372 (40%), Positives = 227/372 (61%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ--VSLGF 66
           PPV  FN LLG L K KHY TV+SL K+++   + P++YT +ILINC C   +  V   F
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              G++ +    P  VTF +L+ GLC++++I++A  LF ++   G  P++ITY T+I GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ GHT  AL L K+M     E G   KP+ V Y+ +ID LCK+   ++A   F +M  +
Sbjct: 187 CKIGHTTNALQLLKKME----EKGC--KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTY+S++HGFC+    NEA  L  +M+ + V PN V+  ++++ LCK G +  A
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+ ++M +  V P+A+TY+ LMDG+CL  +++  ++LF  M   G       YNILING
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK++ + EA +L +E+  + + P  VTY+TL  G  +  + + A KLF EM    +  D
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420

Query: 367 TCTYRTFIDGLC 378
           + TY   +DGLC
Sbjct: 421 SITYSILLDGLC 432



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++  +  +  F  +   G+ P++ TYS +++ FC +GQ++    +
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN VTFT L+ GLC E  I+EA  +F  +   G EP+  TY+ L++G C 
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  M      +G  F P+   Y+I+I+G CK   +++AK L  +M   +L
Sbjct: 329 QSQMDEAQKLFDIM------VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++L+ GFC A     A+ L  EM   G+ P+ ++ +++++ LCK+G +D A R
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + P+   YN L+ G C  GK+   +ELF ++   G +    +Y ++I+G  
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  ++ ++   G  P   TYN    G         A++L  EM G   +AD+ 
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 369 TYRTFID 375
           T++  +D
Sbjct: 563 TFQMLLD 569



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 8/289 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A A F +L      P V+ +N L+  L +  H    ++L K+M   N       +PN
Sbjct: 50  VADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSN------IRPN 103

Query: 157 TVTYSIIIDGLCKEG--FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
             T +I+I+ LC      V  A     +M    L P  VT+ +L++G C      +A  L
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             E+   G  P++++   I+  LCK G   NA +LL  M +   +P+   YNT++D  C 
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             + N     F  M   G   +  +Y+ +++G+C   ++ EA SL+ ++  + + P  VT
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  L  GL +      A ++F  M  N V  D  TY   +DG C++ Q+
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM 332


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 147/381 (38%), Positives = 230/381 (60%), Gaps = 6/381 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P +  F  +LG L K+ HY TV+SL +++   G+  DL   SILINCF ++GQ 
Sbjct: 64  HQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQN 123

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            L F +  +IL+  + PNV+T T+LIKGLC + +I +A     K+ A G   N ++Y TL
Sbjct: 124 PLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTL 183

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G T  AL L + +       G + +PN V Y+ IID +CK   V++A +L+ +
Sbjct: 184 INGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 237

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P+VVTY +LI GFC      +A  L  +M+ + + PNV + N++++  CK  +
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +L +M++  ++P+ FTYN+LMD +CL  ++N+ K +F ++   G   +  SY+I
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+G+CK K+V+EA++L+ E+    I P VVTYN+L  GL ++ +   ALKL  EM    
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           V  D  TY + +D LC   QV
Sbjct: 418 VPHDKITYNSILDALCKNHQV 438



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 192/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   L+  L         L    ++ ++G   +  +Y  LIN  CK+GQ S    +
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV + ++I  +C    + EA  L++++ + G  P+V+TYN LI+G C 
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF +M   N        PN  T++I++DG CKE  + +AK +   M  + +
Sbjct: 260 VGKMKDATDLFNKMIFEN------INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY SL+  +C   + N+AK +   +  +GV PN+ S +++++  CK  K+D A  
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M   ++ P+  TYN+L+DG C  GKI+   +L   M   G  HD  +YN +++  C
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +V++A++L  ++  +GI+P + TY TL  GL +  + E A  +F ++       D  
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493

Query: 369 TYRTFIDGLC 378
            Y   I G C
Sbjct: 494 IYTAMIQGFC 503



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K K  +    L+  + S G+ PD+ TY+ LI+ FC +G++     +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PNV TF  L+ G C E R+ EA  +   +   G +P+V TYN+L++  C 
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC- 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +  +N  K + N   + GV   PN  +YSI+I G CK   VD+A  LF +M   N+
Sbjct: 329 ---LVKEVNKAKHIFNTISQRGV--NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SLI G C     + A  L+ EM D+GV  + ++ N I++ LCKN ++D A  
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    ++P+  TY TL+DG C  G++   + +F  +   G   D   Y  +I G+C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +   +E+L L +++   G  P  VTY  +   LF+  + ++A KL  EM
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 6/362 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L +R++   + P++  Y+ +I+  CK+  V+  F ++  +
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVT+ +LI G C   ++ +A  LF K+      PNV T+N L++G C+    
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N+   M           KP+  TY+ ++D  C    V+KAK +F  +    +NPN+
Sbjct: 299 KEAKNVLAMMMKQG------IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +Y+ +IHGFC     +EA  L  EM    + P+VV+ N +++ LCK GK+  A +L+D 
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V  +  TYN+++D  C   ++++   L   M+  G + D  +Y  L++G CKN  
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  ++ +L  KG    V  Y  +  G       + +L L  +M+ N    +  TY  
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532

Query: 373 FI 374
            I
Sbjct: 533 II 534



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 147/284 (51%), Gaps = 6/284 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+    K +      ++   +   G+ PD++TY+ L++ +C + +V+    I
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  I +    PN+ +++ +I G C   ++ EA  LF ++      P+V+TYN+LI+GLC+
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L  EM +     GV    + +TY+ I+D LCK   VDKA  L  +MK E +
Sbjct: 400 LGKISYALKLVDEMHDR----GV--PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TYT+L+ G C      +A+ +  +++ +G   +V     ++   C +G  D +  
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           LL  M +    PNA TY  ++       + ++ ++L   M + G
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 6/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++I++    K K  D  ++LFK ++   + PD+ TY+ LI+  CK+G++S    +
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       + +T+ S++  LC   ++ +A AL TK+K  G +P++ TY TL++GLC+
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F+++       G +   N   Y+ +I G C  G  D++ +L  +M+    
Sbjct: 470 NGRLEDARIVFEDLLVK----GYILDVNI--YTAMIQGFCSHGLFDESLDLLSKMEENGC 523

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            PN VTY  +I      ++ ++A+ LL EM+ +G+
Sbjct: 524 IPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P    ++N +L  L KN   D  ++L  ++   G+ PD+ TY+ L++  CK G++
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
               ++F  +L   +  +V  +T++I+G C+     E+  L +K++  GC PN +TY  +
Sbjct: 474 EDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII 533

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L +EM
Sbjct: 534 ICSLFDKDENDKAEKLLREM 553



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%)

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           L+ Q + +P+ F +  ++     +   + V  L   ME  G   D    +ILIN + +  
Sbjct: 62  LLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLG 121

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +   + S+  ++   G +P V+T  TL  GL    Q  +AL+   ++       +  +Y 
Sbjct: 122 QNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYG 181

Query: 372 TFIDGLC 378
           T I+GLC
Sbjct: 182 TLINGLC 188


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  290 bits (742), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 153/385 (39%), Positives = 229/385 (59%), Gaps = 10/385 (2%)

Query: 3   HMHPSPPPVS--SFNILLGCLAK--NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           H+  + P  S   FN +LG L K  N HY T +SL +RL   G+ PD++T++ILINC+C 
Sbjct: 56  HLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCH 115

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           M +++  F +  +IL+  + P+ +TF +LIKGLC   ++ EA      + A G   +  +
Sbjct: 116 MAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFS 175

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TLINGLC+ G T  AL + +++       G + K N V Y+ IID LCK   V  A E
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKID------GKLVKINVVMYNTIIDSLCKHKLVIDAYE 229

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L+ QM  + ++P+VVT+++LI+GFC      EA GL  EMV + + P+  + N++++ LC
Sbjct: 230 LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALC 289

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G +  A  +L +M++  V PN  TY++LMDG+CL  ++N+ K +  ++  MG   +  
Sbjct: 290 KEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAH 349

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY  +ING+CK K V+EALSL+N++ FKGI P  VTYN+L  GL +  +   A +L  EM
Sbjct: 350 SYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEM 409

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
             N   A+  TY   ID LC    V
Sbjct: 410 HDNGQPANIFTYNCLIDALCKNHHV 434



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 196/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L  N      L     + ++G   D ++Y  LIN  CK+G+      +
Sbjct: 136 PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQM 195

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +I       NVV + ++I  LC    +++A  L++++ A    P+V+T++ LI G C 
Sbjct: 196 LRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCI 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF+EM   N        P+  T++I++D LCKEG +  AK + + M  E +
Sbjct: 256 VGQLEEAFGLFREMVLKN------INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY+SL+ G+C  N  N+AK +L  +   G  PN  S   ++N  CK   +D A  
Sbjct: 310 MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    + P+  TYN+L+DG C +G+I+   EL   M   G   + F+YN LI+  C
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALC 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  V++A++L  ++  +GI+P + T+N L +GL ++ + + A  +F ++     + +  
Sbjct: 430 KNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAW 489

Query: 369 TYRTFIDGLC 378
           TY   ++GLC
Sbjct: 490 TYNIMVNGLC 499



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N ++  L K+K       L+ ++ +  + PD+ T+S LI  FC +GQ+   F +F 
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+  TF  L+  LC E  +  A  +   +   G  PNV+TY++L++G C   
Sbjct: 268 EMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVN 327

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                +N  K + N   ++G    PN  +Y  +I+G CK   VD+A  LF  M+++ + P
Sbjct: 328 Q----VNKAKHVLNTISQMGAA--PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTY SLI G C +   + A  L+ EM D G   N+ + N +++ LCKN  +D A  L+
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             +    ++P+ +T+N L+ G C  G++   +++F  + S G   + ++YNI++NG CK 
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
              +EA +L +++   GI P  VTY TL   LF   + E+A KL  EM   DV
Sbjct: 502 GLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 6/342 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+         +    LF+ +    + PD YT++IL++  CK G +     +
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNVVT++SL+ G C  +++ +A  +   +   G  PN  +Y T+ING C+
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+LF +M            P+ VTY+ +IDGLCK G +  A EL  +M     
Sbjct: 361 IKMVDEALSLFNDMQFKG------IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ 414

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+ TY  LI   C  +  ++A  L+ ++ DQG+QP++ + N+++  LCK G++ NA  
Sbjct: 415 PANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQD 474

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   ++      NA+TYN +++G C  G  +  + L   M+  G   D  +Y  LI    
Sbjct: 475 VFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALF 534

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
              E E+A  L  E+  + +   +     + H   E +  E+
Sbjct: 535 HKDENEKAEKLLREMIARDVVYALEGLEMVLHLESEAKDQEK 576



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 84/164 (51%)

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ P++ + N+++N  C   +M+ A  ++  +++    P+  T+NTL+ G CL GK+  
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                  + ++G   D FSY  LING CK  E   AL +  ++  K +K  VV YNT+  
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            L + +    A +L+ +M    ++ D  T+   I G C+  Q+ 
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +  P  + ++N L+  L KN H D  ++L K++   G+ PD+YT++ILI   CK+G++
Sbjct: 410 HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   ++ N  T+  ++ GLC E    EA AL +K+   G  P+ +TY TL
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETL 529

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L +EM
Sbjct: 530 IQALFHKDENEKAEKLLREM 549



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N     A+SL   L F GI P + T+N L +    + +   A  +  ++       DT T
Sbjct: 81  NNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTIT 140

Query: 370 YRTFIDGLCVRPQVR 384
           + T I GLC+  +V+
Sbjct: 141 FNTLIKGLCLNGKVK 155


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/375 (39%), Positives = 227/375 (60%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+  F  +LG L K   Y T +SL + +   G+  DL T++ILINCF ++G     F +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  IL+  + PN +T T+LIKGLC + +I +A     K+ A G   N + Y TLINGLC+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  AL L + +       G + +PN V Y+ IID +CK   V++A +L+ +M  + +
Sbjct: 174 VGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY++LI GFC     N+A GL  +M+ + + P+V + +++++  CK G++  A  
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +M++  ++P+  TY +LMDG+CL  ++N+ K +F +M   G   +  SYNI+ING+C
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K+V+EA++L+ E+  K I P VVTYN+L  GL +  +   ALKL  EM    V  D  
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407

Query: 369 TYRTFIDGLCVRPQV 383
           TY + +D LC   QV
Sbjct: 408 TYNSILDALCKNHQV 422



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K K  +    L+  + S G+ PD+ TYS LI+ FC +G+++    +
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+V TF+ L+ G C E R+ EA  +   +   G +P+V+TY +L++G C 
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M  G    GV    N  +Y+I+I+G CK   VD+A  LF +M  +N+
Sbjct: 314 VKQVNKAKSIFNTMAQG----GVT--ANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SLI G C +   + A  L+ EM D+GV  + ++ N I++ LCKN ++D A  
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    ++P+ +TY  L+DG C  G++   + +F  +   G     ++Y ++I G+C
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            N   ++AL+L +++   G  P   TY  +   LFE  + + A KL  EM
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 169/320 (52%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+         +  + LF ++ S  + PD+YT+SIL++ FCK G+V     +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVT+ SL+ G C   ++ +A ++F  +   G   NV +YN +ING C+
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+NLFKEM   N        P+ VTY+ +IDGLCK G +  A +L  +M    +
Sbjct: 349 IKKVDEAMNLFKEMHCKN------IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY S++   C  +  ++A  LL +M D+G+QP++ +  ++++ LCK G++ +A  
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN 462

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + ++        +TY  ++ GFC     ++   L   ME  GC  +  +Y I+I    
Sbjct: 463 IFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLF 522

Query: 309 KNKEVEEALSLYNELPFKGI 328
           +  E + A  L  E+  +G+
Sbjct: 523 EKDENDMAEKLLREMIARGL 542



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P    ++N +L  L KN   D  ++L  ++   G+ PD+YTY+ILI+  CK G++
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                IF  +L   +   V T+T +I+G C      +A AL +K++  GC PN  TY  +
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L       +A  L +EM
Sbjct: 518 ILSLFEKDENDMAEKLLREM 537



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 4/193 (2%)

Query: 189 NPNVVTYTSL---IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           NP  +  TSL   +H   H +D +        +++    P +     I+  L K      
Sbjct: 16  NPKFIISTSLYSQLHHH-HQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQT 74

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M    +  +  T+N L++ F   G  +    +F ++   G + +  +   LI 
Sbjct: 75  AISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIK 134

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C   ++ +AL  ++++   G     V Y TL +GL ++ Q   AL+L   + G  V  
Sbjct: 135 GLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194

Query: 366 DTCTYRTFIDGLC 378
           +   Y T ID +C
Sbjct: 195 NVVMYNTIIDSMC 207


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L   +AK K Y+ VL+L K++ S G+   +YT SI+INCFC+  ++S  F  
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
            G+I++  + P+ V F +L+ GLC E R+ EA  L  ++   G +P +IT NTL+NGLC 
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 128 ----------------------------------RTGHTIVALNLFKEMTNGNGEIGVVF 153
                                             ++G T +A+ L ++M   N       
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------I 259

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K + V YSIIIDGLCK+G +D A  LF +M+ +    +++TY +LI GFC+A  W++   
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+ + + PNVV+ +V+++   K GK+  A +LL  M+Q  + PN  TYN+L+DGFC
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              ++    ++   M S GC  D  ++NILINGYCK   +++ L L+ E+  +G+    V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  G  +  + E A KLF EM    V  D  +Y+  +DGLC
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++I++  L K+   D   +LF  +   G   D+ TY+ LI  FC  G+   G  +   ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +   +PNVVTF+ LI     E ++ EA  L  ++   G  PN ITYN+LI+G C+     
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+ +   M +   +      P+ +T++I+I+G CK   +D   ELF +M    +  N V
Sbjct: 386 EAIQMVDLMISKGCD------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L+ GFC +     AK L  EMV + V+P++VS  ++++ LC NG+++ A  +   +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +  +   Y  ++ G C   K++   +LF S+   G K D  +YNI+I+  C+   +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A  L+ ++  +G  P  +TYN L         A  A +L  EM+ +   AD  T +  
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 374 IDGL 377
           I+ L
Sbjct: 620 INML 623



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  +L  + K+      + L +++    +  D   YSI+I+  CK G +   F +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +    F  +++T+ +LI G C   R  + A L   +      PNV+T++ LI+   +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L KEM            PNT+TY+ +IDG CKE  +++A ++   M  +  
Sbjct: 346 EGKLREADQLLKEMMQRG------IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+++T+  LI+G+C AN  ++   L  EM  +GV  N V+ N ++   C++GK++ A +
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   VRP+  +Y  L+DG C  G++ +  E+F  +E    + D   Y I+I+G C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +V++A  L+  LP KG+K     YN +   L       +A  LF +M     A D  
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579

Query: 369 TYRTFI 374
           TY   I
Sbjct: 580 TYNILI 585



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 12/289 (4%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A  LF  +      P VI +N L + + +T    + L L K+M +           +  
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG------IAHSIY 124

Query: 159 TYSIIIDGLC---KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           T SI+I+  C   K  +        +++ YE   P+ V + +L++G C     +EA  L+
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYE---PDTVIFNTLLNGLCLECRVSEALELV 181

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             MV+ G +P +++ N ++N LC NGK+ +A  L+D MV+   +PN  TY  +++  C +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+     EL   ME    K D   Y+I+I+G CK+  ++ A +L+NE+  KG K  ++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           NTL  G     + +   KL  +M    ++ +  T+   ID      ++R
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D A +LF  M      P V+ +  L         +     L  +M  +G+  ++ + ++
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  K+  A   +  +++    P+   +NTL++G CL  +++   EL   M  MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K    + N L+NG C N +V +A+ L + +   G +P  VTY  + + + +  Q   A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L  +M+  ++  D   Y   IDGLC
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLC 274



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K D+A  L   M+Q    P    +N L      T +   V  L   MES G  H  ++ +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL-FEIRQAERALKLFVEMQG 360
           I+IN +C+ +++  A S   ++   G +P  V +NTL +GL  E R +E AL+L   M  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVE 186

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                   T  T ++GLC+  +V
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKV 209


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 223/370 (60%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  +LG L K KH+ T +SL K++   G+ PDL T SILINCFC +GQ++  F +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+IL+  + PN +  T+L+KGLC +  + ++     K+ A G + N ++Y TL+NGLC+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+ L + + + +       +P+ V Y+ IIDGLCK+  V++A + + +M    +
Sbjct: 250 IGETRCAIKLLRMIEDRST------RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY++LI GFC A     A  LL EM  + + P+V +  ++++ LCK GK+  A  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M +  V+PN  TY+TLMDG+CL G+++  K++F +M          SYNI+ING C
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K V+EA++L  E+  K + P  VTYN+L  GL +  +   AL L  E+      AD  
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVI 483

Query: 369 TYRTFIDGLC 378
           TY + +DGLC
Sbjct: 484 TYTSLLDGLC 493



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 198/363 (54%), Gaps = 14/363 (3%)

Query: 17  LLGCLAKNKHY-DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           L G + K+ H+ D V++   ++N +       +Y  L+N  CK+G+      +   I   
Sbjct: 214 LKGEVKKSLHFHDKVVAQGFQMNQV-------SYGTLLNGLCKIGETRCAIKLLRMIEDR 266

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              P+VV + ++I GLC +  + EA   +T++ + G  P+VITY+TLI G C  G  + A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            +L  EMT  N        P+  TY+I+ID LCKEG + +AK L   M  E + PNVVTY
Sbjct: 327 FSLLNEMTLKN------INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTY 380

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           ++L+ G+C   + + AK +   MV   V P+V S N+++N LCK   +D A  LL  M+ 
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
            +V PN  TYN+L+DG C +G+I    +L   +   G   D  +Y  L++G CKN+ +++
Sbjct: 441 KNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A++L+ ++  +GI+P   TY  L  GL +  + + A KLF  +       D  TY   I 
Sbjct: 501 AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIG 560

Query: 376 GLC 378
           GLC
Sbjct: 561 GLC 563



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K+K  +     +  +NS G+FPD+ TYS LI  FC  GQ+   F +
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+V T+T LI  LC E ++ EA  L   +   G +PNV+TY+TL++G C 
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M            P+  +Y+I+I+GLCK   VD+A  L  +M ++N+
Sbjct: 390 VGEVHNAKQIFHAMVQTE------VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNV 443

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY SLI G C +     A  L+ E+  +G   +V++   +++ LCKN  +D A  
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  ++PN +TY  L+DG C   ++   ++LF  +   GC  D ++YN++I G C
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EAL++ +++   G  P  VT+  +   LFE  + ++A KL  EM    +A    
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM----IAKGLL 619

Query: 369 TYRTF 373
            +R F
Sbjct: 620 HFRNF 624



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 175/395 (44%), Gaps = 57/395 (14%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG--LCA----- 93
           G+ P+L T SILINC   +GQ++  F + G+IL+  + PN +T T+L+KG   CA     
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 94  --ESR------------------------------------------IVEAAALFTKLKA 109
             E R                                          + +A + F  +  
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
               P++I +  ++  L +  H   A++L K+M     E      P+ VT SI+I+  C 
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIE------PDLVTLSILINCFCH 179

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
            G +  +  +  ++      PN +  T+L+ G C   +  ++     ++V QG Q N VS
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
              ++N LCK G+   A +LL ++     RP+   YNT++DG C    +N   + +  M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           S G   D  +Y+ LI G+C   ++  A SL NE+  K I P V TY  L   L +  + +
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            A  L   M    V  +  TY T +DG C+  +V 
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH 394



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++  LL  L KN++ D  ++LF ++   G+ P+ YTY+ LI+  CK  ++
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  IL      +V T+  +I GLC E  + EA A+ +K++  GC P+ +T+  +
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L  EM
Sbjct: 594 IRSLFEKDENDKAEKLLHEM 613


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 229/416 (55%), Gaps = 41/416 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+     +  ++    LF  +  +G+ PD+ T S+LI+  CK G+V     +
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVT T+L+KGLC + RI +A  LF K++  GC PNV+T  TL+ GLC+
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+  +AL L K M +     G+  KPN ++YSIIIDGLCK G  D+A+ELF +MK   +
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++YTSLIHGFC +  W +AK L  EMVD GVQP+V + +V+++ LCK GK+  A+ 
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--------------- 293
           LL++M+Q    PN  TY TL+ G C+  +I+   +LF+ M+ +GC               
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 294 --------------------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                                     K D  SY+I+I+G CK+   +EA  L+ E+   G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + P V++Y +L HG     + E A  LF EM    V  +  TY   I G C   Q+
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750



 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 138/346 (39%), Positives = 219/346 (63%), Gaps = 6/346 (1%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +G+ PD+ T  +LI+ FCK G+V     +   +++     ++VT+++LIKGLC + RI E
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  LF  +K  GC P+ I Y TL+ GLC+TG   +AL+L +EM N   + G+  KP  V+
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YSIIIDGLCK+   D+A+ELF +MK + + P+V++YTSLIHGFC +  W +AK L  EM+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D G++ +V +S+++++ LCK GK+  A+ LL++M+Q     +  TY+TL+ G C+  +I+
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL----PFKGI--KPTVV 333
               LF+SM+ +GC+ D  +Y  L+ G C+   +  AL L+ E+       GI  KPT++
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +Y+ +  GL + R+ + A +LF EM+   +  D  +Y T I G C+
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCL 349



 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 151/452 (33%), Positives = 237/452 (52%), Gaps = 78/452 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++I++  L K++  D    LFK + + G+ PD+ +Y+ LI+ FC+ G+      +
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 69  FGRIL------------------------------------RSCFAPNVVTFTSLIKGLC 92
           F  +L                                    R C   ++VT+++LIKGLC
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLC 237

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            + RI EA  LF  ++  GC P+ I Y TL+ GLC+TG+   AL L +EM N  G  G+ 
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            KP  ++YSIIIDGLCK+   D+A+ELF +MK + + P+V++YT+LIHGFC +  W +AK
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 357

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM+D G+QP+V +S+V+++ LCK GK+  A++LL++++Q    P+  T  TL+ G 
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417

Query: 273 CLTGKINRVKELFVSMESMG---------------------------------------- 292
           C+  +I++  +LF+ M+ +G                                        
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGI 477

Query: 293 -CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
            CK +  SY+I+I+G CK    +EA  L+ E+   G+ P V++Y +L HG     + + A
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             LF EM    V  D  T+   ID LC   +V
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 569



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 154/238 (64%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+    ++  +     LF  +  IG+ PD+ T+S+LI+  CK G+V     +
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN VT+T+L+KGLC   RI EA  LF K++  GC P+V+TY TL+ GLC+
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG+   AL L K+M +  G+ G  FKP+ ++YSIIIDGLCK G  D+A+ELF +MK   +
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            PNV++YTSLIHGFC +    +AK L  EMVDQGVQ N V+ +V+++  CK G++D A
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 196/365 (53%), Gaps = 20/365 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   L+  L           LF ++  +G  P++ T + L+   C+ G + +   +
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 69  FGRILRSCF------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              +L           PN ++++ +I GLC   R  EA  LF ++KA G  P+VI+Y +L
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G CR+G    A  LF EM +    IGV  +P+  T+S++ID LCKEG V +A EL   
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVD----IGV--QPDVTTFSVLIDMLCKEGKVIEANELLEV 578

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M      PN VTYT+L+ G C  +  +EA  L ++M   G  P+VV+   +M  LC+ G 
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638

Query: 243 MDNASRLLDLMVQ------CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +  A  L   M+        + +P+  +Y+ ++DG C  G+ +  +ELF  M+++G   +
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY  LI+G+C++ ++E+A  L+NE+  +G++   VTY+ + HG  +  Q ++A  LF 
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQ 756

Query: 357 EMQGN 361
           +M+ N
Sbjct: 757 KMEAN 761



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 18/385 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +++ L+  L           LF  +  +G  PD   Y  L+   C+ G ++    +  
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285

Query: 71  RILRSC------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            +L           P +++++ +I GLC + R  EA  LF ++KA G  P+VI+Y TLI+
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C +G    A  LF EM +      V  +P+  T S++ID LCK+G V +A +L   + 
Sbjct: 346 GFCLSGKWEKAKCLFNEMLD------VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVI 399

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+VVT T+L+ G C  +  ++A  L ++M   G  PNVV+   +M  LC++G + 
Sbjct: 400 QRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 459

Query: 245 NASRLLDLMVQ------CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            A  L   M+        + +PNA +Y+ ++DG C  G+ +  +ELF  M+++G   D  
Sbjct: 460 IALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVI 519

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY  LI+G+C++ + ++A  L+NE+   G++P V T++ L   L +  +   A +L   M
Sbjct: 520 SYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 579

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
                  +T TY T + GLC+  ++
Sbjct: 580 IQRGCIPNTVTYTTLVKGLCMNDRI 604



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 189/387 (48%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++  +L+    K         L + +   G   D+ TYS LI   C   ++S    +
Sbjct: 8   PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL----KAFG--CEPNVITYNTL 122
           F  + +    P+ + + +L+KGLC   +I  A  L  ++      +G  C+P +++Y+ +
Sbjct: 68  FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+GLC+      A  LFKEM            P+ ++Y+ +I G C+ G  +KAK LF +
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQG------MMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M    +  +V T + LI   C      EA  LL  M+ +G   ++V+ + ++  LC   +
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM------ESMGCKHD 296
           +  A+RL   M +   RP+A  Y TLM G C TG IN   +L   M        + CK  
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY+I+I+G CK++  +EA  L+ E+  +GI P V++Y TL HG     + E+A  LF 
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           EM    +  D  T    ID LC + +V
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKV 388



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 41/429 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +++ L+  L           LF  +  +G  PD   Y  L+   C+ G++++   +  
Sbjct: 45  IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 104

Query: 71  RILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            +L           P +V+++ +I GLC + R  EA  LF ++KA G  P+VI+Y +LI+
Sbjct: 105 EMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 164

Query: 125 GLCRTGHTIVALNLFKEM---------TNGNGEIGVVFKP-------------------- 155
           G CR+G    A  LF EM         T  +  I ++ K                     
Sbjct: 165 GFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 224

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + VTYS +I GLC +  + +A  LF+ M+     P+ + Y +L+ G C   + N A  L 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 216 IEMV-DQG-----VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            EM+ D G      +P ++S ++I++ LCK+ + D A  L   M    + P+  +Y TL+
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            GFCL+GK  + K LF  M  +G + D  + ++LI+  CK  +V EA  L   +  +G  
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYAR 389
           P VVT  TL  GL    +  +A +LF++MQ      +  T  T + GLC    ++     
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 390 RKGNSGNTN 398
            K    +T+
Sbjct: 465 HKNMLSDTS 473



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 10/241 (4%)

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V  +P+  T  ++ID  CKEG V +A EL   M       ++VTY++LI G C  +  +E
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM--------VQCDVRPNA 262
           A  L + M   G +P+ ++   +M  LC+ GK++ A  L   M        ++C  +P  
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC--KPTL 121

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            +Y+ ++DG C   + +  +ELF  M++ G   D  SY  LI+G+C++ + E+A  L+NE
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +   GI+  V T + L   L +  +   A +L   M       D  TY T I GLC++ +
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 383 V 383
           +
Sbjct: 242 I 242



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 6/207 (2%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M +  + P+V T   LI  FC      EA  LL  MV +G   ++V+ + ++  LC   +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF------VSMESMGCKHD 296
           +  A++L   M +   RP+A  Y TLM G C TGKIN    L        S   + CK  
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY+I+I+G CK++  +EA  L+ E+  +G+ P V++Y +L HG     + E+A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           EM    + +D  T    ID LC   +V
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKV 207


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  286 bits (733), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 229/405 (56%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK   +D V+SL +++ ++G+  + YTYSIL+NCFC+  Q+ L   +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++ A GC+P++ TY T++NGLC+ G   +AL+L K+M  G  E     
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE----- 253

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N V Y+ IIDGLCK   +D A +LF +M+ + + P+V TY SLI   C+   W++A  
Sbjct: 254 -ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ N +++   K GK+  A +L D M+Q  + PN  TYN+L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  +++F  M S  C  D  +YN LI G+CK K VEE + L+ E+  +G+    V
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  GLF+    + A K+F +M  + V  D  TY   +DGLC
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 190/364 (52%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L K KH D    LF ++ + G+ PD++TY+ LI+C C  G+ S    +   ++
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF SLI     E +++EA  LF ++     +PN++TYN+LING C      
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F  M + +        P+ VTY+ +I G CK   V++  ELF +M    L  N V
Sbjct: 379 EAQQIFTLMVSKD------CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G   A D + A+ +  +MV  GV P++++ +++++ LCK GK++ A  + + +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + PN +TYN +++G C  GK+    +LF S+   G K +   Y  +I+G+C+    
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA +L+ E+   G  P    YNTL            + +L  EM+      D  T    
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612

Query: 374 IDGL 377
           I+ L
Sbjct: 613 INML 616



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 196/371 (52%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +FN L+ G    NK  + V +L  R+ + G  PDL+TY  ++N  CK G + L   
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++ +     NVV + ++I GLC    + +A  LF K++  G +P+V TYN+LI+ LC
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L  +M      I     PN VT++ +ID   KEG + +A++LF +M   +
Sbjct: 303 NYGRWSDASRLLSDM------IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           ++PN+VTY SLI+GFC  +  +EA+ +   MV +   P+VV+ N ++   CK  +++   
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M Q  +  N  TYNTL+ G    G  +  +++F  M S G   D  +Y+IL++G 
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  ++E+AL ++  L    ++P + TYN +  G+ +  + E    LF  +    V  + 
Sbjct: 477 CKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536

Query: 368 CTYRTFIDGLC 378
             Y T I G C
Sbjct: 537 IIYTTMISGFC 547



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 6/317 (1%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +FG +++S   P+++ F+ L+  +   ++     +L  +++  G   N  TY+ L+N  
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCF 126

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR     +AL +  +M      + + ++P+ VT S +++G C    + +A  L  QM   
Sbjct: 127 CRRSQLPLALAVLGKM------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+ VT+ +LIHG    N  +EA  L+  MV +G QP++ +   ++N LCK G +D A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             LL  M +  +  N   YNT++DG C    ++   +LF  ME+ G K D F+YN LI+ 
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C      +A  L +++  + I P VVT+N+L     +  +   A KLF EM    +  +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 367 TCTYRTFIDGLCVRPQV 383
             TY + I+G C+  ++
Sbjct: 361 IVTYNSLINGFCMHDRL 377



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 153/286 (53%), Gaps = 6/286 (2%)

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +E ++ +A ALF ++      P++I ++ L++ + +     V ++L ++M N    +G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              N  TYSI+++  C+   +  A  +  +M      P++VT +SL++G+CH    +EA 
Sbjct: 113 -PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ +MV+ G +P+ V+ N +++ L  + K   A  L+D MV    +P+ FTY T+++G 
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G I+    L   ME    + +   YN +I+G CK K +++A  L+N++  KGIKP V
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TYN+L   L    +   A +L  +M    +  +  T+ + ID   
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 6/169 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L K    +  L +F+ L    + P++YTY+I+I   CK G+V  G+ 
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWD 522

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNV+ +T++I G C +    EA ALF ++K  G  P+   YNTLI    
Sbjct: 523 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 582

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
           R G    +  L KEM +     G V   +T++  I  + DG  ++ +++
Sbjct: 583 RDGDKAASAELIKEMRS----CGFVGDASTISMVINMLHDGRLEKSYLE 627



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 39/188 (20%)

Query: 235 NELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            +L +NG    K+D+A  L   MV+    P+   ++ L+       K + V  L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 291 MGCKHDDFSYNIL-----------------------------------INGYCKNKEVEE 315
           +G  H+ ++Y+IL                                   +NGYC  K + E
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 169

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A++L +++   G KP  VT+NTL HGLF   +A  A+ L   M       D  TY T ++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 376 GLCVRPQV 383
           GLC R  +
Sbjct: 230 GLCKRGDI 237


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 223/370 (60%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+  FN +LG LAK K Y T +SL K++   G+  +  T +ILINCFC +GQ++  F +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+IL+  + P+ +T  +L+KGLC +  + ++     K+ A G + + ++Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+ L + + + +       +PN V Y+ IIDGLCK+  V++A +L+ +M    +
Sbjct: 128 IGETRCAVKLLRMIEDRST------RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TYT+LI+GFC       A  LL EM+ + + P V   N+++N LCK G +  A  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M +  ++P   TY+TLMDG+CL G++   K++F +M  MG   + +SYNI+ING C
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K V+EA++L  E+  K + P  VTYN+L  GL +  +   AL L  EM      AD  
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361

Query: 369 TYRTFIDGLC 378
           TY + +D LC
Sbjct: 362 TYTSLLDALC 371



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 190/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N L+  L         L    ++ + G   D  +Y  L+N  CK+G+      +
Sbjct: 78  PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      PNVV + ++I GLC +  + EA  L++++ A G  P+ ITY TLI G C 
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A +L  EM   N        P    Y+I+I+ LCKEG V +AK L   M  E +
Sbjct: 198 LGQLMGAFSLLDEMILKN------INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY++L+ G+C   +   AK +   MV  GV PNV S N+++N LCK  ++D A  
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+  ++ P+  TYN+L+DG C +G+I     L   M   G   D  +Y  L++  C
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN+ +++A +L+ ++  +GI+PT+ TY  L  GL +  + + A +LF  +       D  
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 432 TYTVMISGLC 441



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++  L K+K  +    L+  +++ G+FPD  TY+ LI  FC +GQ+   F
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P V  +  LI  LC E  + EA  L   +   G +P V+TY+TL++G 
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C  G    A  +F  M     ++GV   PN  +Y+I+I+GLCK   VD+A  L  +M ++
Sbjct: 266 CLVGEVQNAKQIFHAMV----QMGV--NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 319

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P+ VTY SLI G C +     A  L+ EM  +G   +VV+   +++ LCKN  +D A
Sbjct: 320 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 379

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           + L   M +  ++P  +TY  L+DG C  G++   +ELF  +   GC  D ++Y ++I+G
Sbjct: 380 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            CK    +EAL++ +++   G  P  VT+  +   LFE  + ++A KL  EM
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 6/271 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P +I +N ++  L +    + A++L K+M     E+  + + N VT +I+I+  C  G +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQM-----EVKGI-RANFVTLNILINCFCHLGQM 61

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             +  +  ++      P+ +T  +L+ G C   +  ++     ++V QG Q + VS   +
Sbjct: 62  AFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTL 121

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N LCK G+   A +LL ++     RPN   YNT++DG C    +N   +L+  M++ G 
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +Y  LI G+C   ++  A SL +E+  K I P V  YN L + L +    + A  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L   M    +     TY T +DG C+  +V+
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQ 272



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++  LL  L KN++ D   +LF ++   G+ P +YTY+ LI+  CK G++
Sbjct: 352 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 411

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      +V T+T +I GLC E    EA A+ +K++  GC PN +T+  +
Sbjct: 412 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L  EM
Sbjct: 472 IRSLFEKDENDKAEKLLHEM 491



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P ++  N I+  L K  +   A  L   M    +R N  T N L++ FC  G++     +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              +  +G + D  + N L+ G C   EV+++L  ++++  +G +   V+Y TL +GL +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           I +   A+KL   ++      +   Y T IDGLC    V   Y
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 146/378 (38%), Positives = 226/378 (59%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M+P P  V  F   LG +AK K Y TV+ L  +++  G+   +Y+ +ILINC C++ 
Sbjct: 84  MARMNPRPSIVE-FGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     ++G++ +    P+V+TFT+LI G+C E +I  A  L+ ++   G EP+VI+YN
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC +G+T +A+++FK+M   NG      KPN VTY+ IID LCK+  V+ A +  
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQ-NG-----CKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+ +TY S++HG C     NEA  L   M   G +P+VV+ N+I++ L K+
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             +++A+  L  MV   + P+  TY T++ G C  G++N    LF  ME  GCK D  +Y
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +I+  CK++ V +A+   +E+  +GI P  VTY+T+ HG   + Q + A +LF EM G
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436

Query: 361 NDVAADTCTYRTFIDGLC 378
            +V  +T T+   +DGLC
Sbjct: 437 RNVMPNTLTFSILVDGLC 454



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 210/370 (56%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++  +  +     +   G+ PD  TY+ +++  C +GQ++    +
Sbjct: 231 PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRL 290

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ ++   P+VVT+  +I  L  +  + +AA   +++   G  P+V+TY T+++GLC 
Sbjct: 291 FKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LFK+M           KP+ V Y+ IID LCK+  V+ A E   +M    +
Sbjct: 351 LGQLNEAIRLFKKMEQKG------CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY++++HGFC+    +EA  L  EMV + V PN ++ +++++ LC+ G +  A  
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M +  V PN +TYN LM+G+CL  K+N  +++F  M   GC  D  SYNILINGYC
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYC 524

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            ++ +++A +L  ++  K + P  VTYNT+  GL  + +   A +LF +M  + +     
Sbjct: 525 NSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLM 584

Query: 369 TYRTFIDGLC 378
           TY   ++GLC
Sbjct: 585 TYSILLNGLC 594



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 205/369 (55%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++  L K++  +        +   G+ PD+ TY+ +++  C +GQ++    +
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+VV + ++I  LC +  + +A    +++   G  PN +TY+T+++G C 
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LFKEM      +G    PNT+T+SI++DGLC+EG V +A+ +F  M  + +
Sbjct: 421 LGQLDEATQLFKEM------VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGV 474

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY +L++G+C     NEA+ +   MV +G  P++ S N+++N  C + +MD A  
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    + PN  TYNT+M G C  G++   +ELF  M S G      +Y+IL+NG C
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  ++EAL L+  +  K ++P ++ Y  L  G+F   + E A  LF ++  + +     
Sbjct: 595 KHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGR 654

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 655 TYNVMIKGL 663



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 172/310 (55%), Gaps = 6/310 (1%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ R    P++V F   +  +    +      L  ++  FG    V + N LIN LCR
Sbjct: 81  FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A++++ +M     ++G+  +P+ +T++ +I+G+C EG +  A EL+ +M     
Sbjct: 141 LNHVDFAVSVWGKMF----KLGI--QPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++Y +LI+G C++ + N A  +  +M   G +PNVV+ N I++ LCK+  +++A  
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  MV   + P+A TYN+++ G C  G++N    LF  ME  GCK D  +YNI+I+   
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ V +A    +E+  +GI P VVTY T+ HGL  + Q   A++LF +M+      D  
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 369 TYRTFIDGLC 378
            Y T ID LC
Sbjct: 375 AYNTIIDSLC 384



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 172/325 (52%), Gaps = 8/325 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++  +  +     +   G+ P+  TYS +++ FC +GQ+     +
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN +TF+ L+ GLC E  + EA  +F  +   G EPN+ TYN L+NG C 
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M      +G    P+  +Y+I+I+G C    +DKAK L  QM  + L
Sbjct: 491 RCKMNEARKVFEIM------VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +++ G C+     +A+ L  +M   G+ P +++ ++++N LCK+G +D A +
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  + P+   Y  L++G  + GK+   K LF  + + G +    +YN++I G  
Sbjct: 605 LFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLL 664

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
           K    +EA  L+ +  +K +K  V+
Sbjct: 665 KEGLSDEAYELFRK--WKMMKHNVI 687



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 102/211 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           VD A   F +M   N  P++V +   +        ++    L  +M   GV   V S N+
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N LC+   +D A  +   M +  ++P+  T+ TL++G C  GKI    EL+  M   G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  SYN LING C +     A+ ++ ++   G KP VVTYNT+   L + R    A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               EM G  +  D  TY + + GLC   Q+
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 149/380 (39%), Positives = 229/380 (60%), Gaps = 9/380 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAK--NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M  M P+P  V  FN +LG + K  N HY T +SL  +L   G+ P + T++IL+NC+C 
Sbjct: 48  MLRMRPTPSIVE-FNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCH 106

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           +G+++  F IF +IL+  + P  +TF +LI G+C   ++ EA      + A G   + ++
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TLINGLC+ G T  AL + K++       G +   + V Y+III+ LCK+  V  A +
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIE------GKLVNTDVVMYNIIINSLCKDKAVSDAYQ 220

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L+ +M  + ++P+VVT+ SLI GFC      EA GL  EMV + + P+V + +++++ LC
Sbjct: 221 LYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALC 280

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G +  A  +L +M++  V P+  TY++LMDG+CL  ++N+ K +F +M  +G      
Sbjct: 281 KDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAH 340

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SYNI+ING  K K V+EALSL+ E+  KGI P  VTYN+L  GL ++ +   A +L  EM
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             N + AD  TY + ID LC
Sbjct: 401 HNNGIPADILTYNSLIDVLC 420



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 193/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  +  N      L     + ++G   D  +Y  LIN  CK+G+      +
Sbjct: 127 PTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQM 186

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +I       +VV +  +I  LC +  + +A  L++++      P+V+T+N+LI G C 
Sbjct: 187 LKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF EM   N        P+  T+SI++D LCK+G + +AK +   M  + +
Sbjct: 247 VGQLKEAFGLFHEMVLKN------INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGV 300

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+SL+ G+C  N+ N+AK +   M   GV P+  S N+++N L K   +D A  
Sbjct: 301 IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 360

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    + P+  TYN+L+DG C  G+I+   +L   M + G   D  +YN LI+  C
Sbjct: 361 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLC 420

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  +++A++L  ++  +GI+P++ TYN L  GL +  + + A  +F ++     + +  
Sbjct: 421 KNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAW 480

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 481 TYNIMINGLC 490



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +NI++  L K+K       L+  + +  + PD+ T++ LI  FC +GQ+   F +F 
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+V TF+ L+  LC +  I  A  +   +   G  P+V+TY++L++G C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A ++F  M+     +GV   P+  +Y+I+I+GL K   VD+A  LF +M  + + P
Sbjct: 319 EVNKAKHVFSTMS----RLGVA--PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTY SLI G C     + A  L+ EM + G+  ++++ N +++ LCKN  +D A  L+
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             +    ++P+ +TYN L+DG C  G++   +++F  +   G   + ++YNI+ING CK 
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
               EA  L +++   GI P  VTY T+   LF   + E+A KL  EM
Sbjct: 493 GLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 170/320 (53%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+              LF  +    + PD+YT+SIL++  CK G ++    +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVT++SL+ G C  + + +A  +F+ +   G  P+  +YN +INGL +
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+LFKEM            P+TVTY+ +IDGLCK G +  A +L  +M    +
Sbjct: 352 IKMVDEALSLFKEMCCKG------IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +++TY SLI   C  +  ++A  L+ ++ DQG+QP++ + N++++ LCK G++ NA  
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD 465

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   ++      NA+TYN +++G C  G  N  + L   ME+ G   D  +Y  +I    
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALF 525

Query: 309 KNKEVEEALSLYNELPFKGI 328
           +  E E+A  L  E+  +G+
Sbjct: 526 RKDENEKAEKLLREMIIRGL 545



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +  P  + ++N L+  L KN H D  ++L K++   G+ P +YTY+ILI+  CK G++
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRL 460

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   ++ N  T+  +I GLC E    EA  L +K++  G  P+ +TY T+
Sbjct: 461 KNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETI 520

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L R      A  L +EM
Sbjct: 521 IRALFRKDENEKAEKLLREM 540


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  284 bits (727), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 233/422 (55%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK K +D V+SL +++  +G+  +LYTY+ILINCFC+  Q+SL   +
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M     E     
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE----- 257

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N V YS +ID LCK    D A  LF +M+ + + PNV+TY+SLI   C+   W++A  
Sbjct: 258 -ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ N +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +YN LING+CK K ++E + L+ E+  +G+    V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
           TY TL HG F+ R  + A  +F +M  + V  +  TY T +DGLC      +  V F Y 
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496

Query: 389 RR 390
           +R
Sbjct: 497 QR 498



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 180/317 (56%), Gaps = 6/317 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ ++  L K +H D  L+LF  + + G+ P++ TYS LI+C C   + S    +   ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF +LI     E ++VEA  L+ ++     +P++ TY++LING C      
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A ++F+ M + +      F PN VTY+ +I+G CK   +D+  ELF +M    L  N V
Sbjct: 383 EAKHMFELMISKD-----CF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LIHGF  A D + A+ +  +MV  GV PN+++ N +++ LCKNGK++ A  + + +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P  +TYN +++G C  GK+    +LF S+   G K D   YN +I+G+C+    
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556

Query: 314 EEALSLYNELPFKGIKP 330
           EEA +L+ ++   G  P
Sbjct: 557 EEADALFRKMREDGPLP 573



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 155/313 (49%), Gaps = 10/313 (3%)

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G   +GR     F+     +  +++      ++ +A  LF  +      P++  +N L++
Sbjct: 38  GMCYWGR----AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLS 93

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            + +     + ++L ++M      +G+    N  TY+I+I+  C+   +  A  L  +M 
Sbjct: 94  AIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P++VT +SL++G+CH    ++A  L+ +MV+ G +P+ ++   +++ L  + K  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L+D MVQ   +PN  TY  +++G C  G I+    L   ME+   + +   Y+ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +  CK +  ++AL+L+ E+  KG++P V+TY++L   L    +   A +L  +M    + 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 365 ADTCTYRTFIDGL 377
            +  T+   ID  
Sbjct: 328 PNVVTFNALIDAF 340



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H+   ++A GL   MV     P++   N +++ + K  K D    L + M 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  +  N +TYN L++ FC   +I+    L   M  +G +    + + L+NGYC  K + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A++L +++   G +P  +T+ TL HGLF   +A  A+ L   M       +  TY   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 375 DGLCVRPQVRFTY 387
           +GLC R  +   +
Sbjct: 233 NGLCKRGDIDLAF 245



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 106/229 (46%)

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G  F   +  Y  I+        +D A  LF  M      P++  +  L+        ++
Sbjct: 43  GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
               L  +M   G+  N+ + N+++N  C+  ++  A  LL  M++    P+  T ++L+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G+C   +I+    L   M  MG + D  ++  LI+G   + +  EA++L + +  +G +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P +VTY  + +GL +    + A  L  +M+   + A+   Y T ID LC
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  284 bits (727), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 151/391 (38%), Positives = 227/391 (58%), Gaps = 16/391 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSI---------LINCFCKM 59
           P   +FNIL+ CL   K  +  L+    +   G  PD+ TYSI         LI+  CK 
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G+V     +   +++     ++VT+++LIKGLC E RI EA  LF  ++  GC P+ ITY
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            TL+ GLC+TG+  +AL L +EM N  G  G+  KP  ++YSIIIDGLCK+   D+A+EL
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +MK + + P+V++YTSLIHGFCH+  W +AK L  EM+D G+QP+V +S V+++  CK
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A+ LL++MV      +  TY+TL+ G C+  +I+   +LF+SM+ +GC+ D  +
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 300 YNILINGYCKNKEVEEALSLYNEL-------PFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           Y  L+ G C+  ++  AL L+ E+         K I+P V T + L   L +  +   A 
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +L   M       D  TY T I GLC+  ++
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398



 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/416 (36%), Positives = 228/416 (54%), Gaps = 41/416 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+     +  ++    LF  +  +G+ PD+ T S+LI+  CK G+V     +
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++     +VVT T+L+KGLC + RI +A  LF K++  GC PNV+T  TL+ GLC+
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+  +AL L K M +     G+  KPN ++YSIIIDGLCK G  D+A+ELF +MK   +
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++YTSLIHGFC +  W +AK L  EMVD GVQP+V + +V+++ LCK GK+  A+ 
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--------------- 293
           LL++M+Q    PN  TY TL+ G C+  +I+   +LF+ M+ +GC               
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790

Query: 294 --------------------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                                     K D  SY+I+I+G CK+   +EA  L+ E+   G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + P V++Y +L HG     + E A  LF EM    V  +  TY   I G C   Q+
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906



 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 230/423 (54%), Gaps = 48/423 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLF------PDLYTYSILINCFCKMGQ 61
           P   ++  L+  L +    +  L L +  LN    +      PD+ T S+LI+  CK G+
Sbjct: 303 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGK 362

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +   +++     ++VT+++LIKGLC E RI EA  LF  ++  GC P+ ITY T
Sbjct: 363 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           L+ GLC+TG+  +AL L +EM N  G  G+  KP  ++YSIIIDGLCK+   D+A+ELF 
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +MK + + P+V++YT+LIHGFC +  W +AK L  EM+D G+QP+V +S+V+++ LCK G
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--------- 292
           K+  A++LL++++Q     +  T  TL+ G C+  +I++  +LF+ M+ +G         
Sbjct: 543 KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602

Query: 293 --------------------------------CKHDDFSYNILINGYCKNKEVEEALSLY 320
                                           CK +  SY+I+I+G CK    +EA  L+
Sbjct: 603 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 662

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            E+   G+ P V++Y +L HG     + + A  LF EM    V  D  T+   ID LC  
Sbjct: 663 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKE 722

Query: 381 PQV 383
            +V
Sbjct: 723 GKV 725



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 154/238 (64%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+    ++  +     LF  +  IG+ PD+ T+S+LI+  CK G+V     +
Sbjct: 672 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 731

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN VT+T+L+KGLC   RI EA  LF K++  GC P+V+TY TL+ GLC+
Sbjct: 732 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG+   AL L K+M +  G+ G  FKP+ ++YSIIIDGLCK G  D+A+ELF +MK   +
Sbjct: 792 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 851

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            PNV++YTSLIHGFC +    +AK L  EMVDQGVQ N V+ +V+++  CK G++D A
Sbjct: 852 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 219/467 (46%), Gaps = 77/467 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++I++  L K++  D    LFK + + G+ PD+ +Y+ LI+ FC  G+      +
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222

Query: 69  FGRILRSCFAPNV-----------------------------------VTFTSLIKGLCA 93
           F  +L     P+V                                   VT+++LIKGLC 
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV-V 152
           + RI EA  LF  +K  GC P+ I Y TL+ GLC+TG   +AL+L +EM N   + G+  
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 342

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKEL--------------------------------- 179
            +P+  T S++ID LCKEG V +A EL                                 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 180 --FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQG-----VQPNVVSSN 231
             F+ M+     P+ +TY +L+ G C   + N A  L  EM+ D G      +P ++S +
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           +I++ LCK+ + D A  L + M    + P+  +Y TL+ GFCL+GK  + K LF  M  +
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D  + ++LI+  CK  +V EA  L   +  +G    VVT  TL  GL    +  +A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTN 398
            +LF++MQ      +  T  T + GLC    ++      K    +T+
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 629



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 190/342 (55%), Gaps = 20/342 (5%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCF------APNVVTFT 85
            LF ++  +G  P++ T + L+   C+ G + +   +   +L           PN ++++
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
            +I GLC   R  EA  LF ++KA G  P+VI+Y +LI+G CR+G    A  LF EM + 
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD- 702

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
              IGV  +P+  T+S++ID LCKEG V +A EL   M      PN VTYT+L+ G C  
Sbjct: 703 ---IGV--QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ------CDVR 259
           +  +EA  L ++M   G  P+VV+   +M  LC+ G +  A  L   M+        + +
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  +Y+ ++DG C  G+ +  +ELF  M+++G   +  SY  LI+G+C++ ++E+A  L
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 877

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           +NE+  +G++   VTY+ + HG  +  Q ++A  LF +M+ N
Sbjct: 878 FNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 13/288 (4%)

Query: 107 LKAFGCEPNVITYNTLINGLC---RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           ++  G  P+  T+N LIN LC   R    + A+            +    +P+  T S++
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ID LCKEG V +A EL   M       ++VTY++LI G C  +  +EA  L + M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLM--------VQCDVRPNAFTYNTLMDGFCLT 275
           +P+ ++   +M  LC+ G ++ A +L   M        ++C  +P   +Y+ ++DG C  
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC--KPTLISYSIIIDGLCKD 178

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            + +  +ELF  M++ G   D  SY  LI+G+C + + E+A  L+NE+   GI+P V T 
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L     +  +   A +L   M       D  TY T I GLC++ ++
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRI 286


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 146/369 (39%), Positives = 220/369 (59%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  L   L + KHY TV+SL K++   G+  D+ + +ILINCFC++  V  GF +
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+I++    PNV+TF++LI G C E +I  A  LF  + A G +PNV +Y+ +I GLCR
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T   + L + M     E      P+ V Y+ I+D LCK+  V++A  +F +MK   +
Sbjct: 209 VGKTTEVIKLLEHMKVVGCE------PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTYTSLIHG  +   W EA GLL EM    + P++V+ +V+++ +CK G++  A  
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M +  V P+  TYNTLM+G+CL  ++   +++F  M S G   D FS++IL+NGYC
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K ++EA  L++E+  +G+ P  V+YNTL  GL + R+   A +LF +M  N    +  
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442

Query: 369 TYRTFIDGL 377
           TY   +D L
Sbjct: 443 TYSILLDCL 451



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 138/252 (54%), Gaps = 6/252 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F++L+  + K         + K +  +G+ PD+ TY+ L+N +C   +V     +
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+V +F+ L+ G C   RI EA  LF ++   G  P+ ++YNTLI+GLC+
Sbjct: 359 FEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  LFK+M + NG     + PN VTYSI++D L K+G++D+A  LF  M+   L
Sbjct: 419 ARRPLEAEELFKDM-HSNG-----YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY  +I G C    + +A+ L  E+  +G+QPN       ++ +CK G +D A +
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 249 LLDLMVQCDVRP 260
               M + D  P
Sbjct: 533 AFRQMEKDDCSP 544



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 6/285 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L     +     L   +    + PDL  +S+LI+  CK G+VS   VI
Sbjct: 264 PTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVI 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+V T+ +L+ G C    +VEA  +F  + + G  P+V +++ L+NG C+
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EMT+     G++  P+TV+Y+ +I GLC+     +A+ELF  M     
Sbjct: 384 AKRIDEAKQLFDEMTHR----GLI--PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTY+ L+         ++A GL   M + G++P++V+ N++++ +CK GK  +A  
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARE 497

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           L   +    ++PN +     +DG C  G ++   + F  ME   C
Sbjct: 498 LFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDC 542



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 129/249 (51%), Gaps = 6/249 (2%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL+ F  M N N        P+ V +  +   L +         L  QM+   ++ +V++
Sbjct: 75  ALSAFNHMVNTNP------LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
            T LI+ FC     +    +L +++  G++PNV++ + ++N  C  GK+  A  L D+MV
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
               +PN  +Y+ ++ G C  GK   V +L   M+ +GC+ D   YN +++  CK++ V 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+ ++ ++   GI PTVVTY +L HGL  + + + A  L  EM+G ++  D   +   I
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 375 DGLCVRPQV 383
           D +C   +V
Sbjct: 309 DIMCKEGEV 317



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 12/273 (4%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+++ +  L + L R  H    ++L K+M             + ++ +I+I+  C+   V
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAG------ISHDVLSLTILINCFCRLCHV 142

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D    +  ++    L PNV+T+++LI+GFC       A  L   MV +G +PNV S ++I
Sbjct: 143 DYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSII 202

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  LC+ GK     +LL+ M      P+   YNT++D  C    +N    +F  M+  G 
Sbjct: 203 IKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF---EIRQAER 350
                +Y  LI+G       +EA  L NE+    I P +V ++ L   +    E+ +A  
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            LK   EM    V  D  TY T ++G C+R +V
Sbjct: 323 ILKTMTEM---GVEPDVATYNTLMNGYCLRMEV 352



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           ++ A   F  M   N  P++V +  L         +     L  +M   G+  +V+S  +
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+   +D    +L  +++  + PN  T++TL++GFC+ GKI R  ELF  M + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K +  SY+I+I G C+  +  E + L   +   G +P VV YNT+   L + R    A+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGL 377
            +F +M+G  +     TY + I GL
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGL 276



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +  PP + +++ILL CL+K  + D  + LF+ + + GL PDL TY+I+I+  CK G+ 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
                +F  +      PN    T  I G+C    + EA   F +++   C P
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 225/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK K +D V+SL +++  + +   LYTY+ILINCFC+  Q+SL   +
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIV------------------------------ 98
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164

Query: 99  -----EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+PN++TY  ++NGLC+ G T +ALNL  +M     E  VV 
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 ++ IID LCK   VD A  LF +M+ + + PNVVTY+SLI   C    W++A  
Sbjct: 225 ------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PN+V+ N +++   K GK   A +L D M++  + P+ FTYN+L++GFC
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  ++++ K++F  M S  C  D  +YN LI G+CK+K VE+   L+ E+  +G+    V
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY TL  GLF     + A K+F +M  + V  D  TY   +DGLC
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L K +H D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +   ++
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+VTF +LI     E + VEA  L+  +     +P++ TYN+L+NG C      
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M + +      F P+ VTY+ +I G CK   V+   ELF +M +  L  + V
Sbjct: 345 KAKQMFEFMVSKD-----CF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LI G  H  D + A+ +  +MV  GV P++++ +++++ LC NGK++ A  + D M
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + +++ + + Y T+++G C  GK++   +LF S+   G K +  +YN +I+G C  + +
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +EA +L  ++   G  P   TYNTL            + +L  EM+      D  T
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 574



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +++  L K    D  L+L  ++ +  +  D+  ++ +I+  CK   V     +
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT++SLI  LC+  R  +A+ L + +      PN++T+N LI+   +
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L+ +M      I     P+  TY+ +++G C    +DKAK++F  M  ++ 
Sbjct: 305 EGKFVEAEKLYDDM------IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI GFC +    +   L  EM  +G+  + V+   ++  L  +G  DNA +
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V P+  TY+ L+DG C  GK+ +  E+F  M+    K D + Y  +I G C
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V++   L+  L  KG+KP VVTYNT+  GL   R  + A  L  +M+ +    ++ 
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 369 TYRTFI 374
           TY T I
Sbjct: 539 TYNTLI 544



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +    +     +L  K++       + TYN LIN  C
Sbjct: 34  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 93

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL L  +M      + + ++P+ VT S +++G C    +  A  L  QM    
Sbjct: 94  RRSQISLALALLGKM------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ +T+T+LIHG    N  +EA  L+  MV +G QPN+V+  V++N LCK G  D A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M    +  +   +NT++D  C    ++    LF  ME+ G + +  +Y+ LI+  
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L +++  K I P +VT+N L     +  +   A KL+ +M    +  D 
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + ++G C+  ++
Sbjct: 328 FTYNSLVNGFCMHDRL 343



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 72/135 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L  N   +  L +F  +    +  D+Y Y+ +I   CK G+V  G+ 
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNVVT+ ++I GLC++  + EA AL  K+K  G  PN  TYNTLI    
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 128 RTGHTIVALNLFKEM 142
           R G    +  L +EM
Sbjct: 549 RDGDKAASAELIREM 563



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H    ++A GL   MV     P++V  N +++ + K  K D    L + M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           + ++    +TYN L++ FC   +I+    L   M  +G +    + + L+NGYC  K + 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A++L +++   G +P  +T+ TL HGLF   +A  A+ L   M       +  TY   +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 375 DGLCVR 380
           +GLC R
Sbjct: 195 NGLCKR 200



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 107/229 (46%)

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G  F   +  Y  I+     +  +D A  LF  M      P++V +  L+        ++
Sbjct: 5   GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 64

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
               L  +M    +   + + N+++N  C+  ++  A  LL  M++    P+  T ++L+
Sbjct: 65  VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 124

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G+C   +I+    L   M  MG + D  ++  LI+G   + +  EA++L + +  +G +
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P +VTY  + +GL +    + AL L  +M+   + AD   + T ID LC
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 233


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 141/368 (38%), Positives = 218/368 (59%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SFNIL+ C          LS F ++  +GL PD+ T++ L++  C   +VS     F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M   +  I     PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A+ L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TYN+++DGFC   +++  +++F  M + GC  D F++  LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+P +G+    VTYNTL HG   +     AL L  +M  + V  D  T 
Sbjct: 409 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 NTLLDGLC 476



 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 203/372 (54%), Gaps = 7/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F  L+G + + +  D V+SL++++    +  D+Y+++ILI CFC   ++      
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG+I +    P+VVTFT+L+ GLC E R+ EA   F ++    C PNV+T+ TL+NGLCR
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YEN 187
            G  + A+ L   M           +P  +TY  I+DG+CK+G    A  L  +M+   +
Sbjct: 197 EGRIVEAVALLDRMMEDG------LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNVV Y+++I   C     ++A+ L  EM ++G+ P++ + N ++   C +G+  +A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL  M++  + P+  TYN L++ F   GK     EL+  M   G   +  +YN +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  ++  +  KG  P V T+ TL  G    ++ +  ++L  EM    + A+T
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430

Query: 368 CTYRTFIDGLCV 379
            TY T I G C+
Sbjct: 431 VTYNTLIHGFCL 442



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 201/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EAA L+ ++   G  PN ITYN++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            P+  T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY +LIHGFC   D N A  L  +M+  GV P++V+ N +++ LC NGK+ +A  
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +   M               V+ DV                                P+ 
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++FVSM S     +  ++N LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    + Y TL +G  ++     AL +F EM  + V  DT T R  + G   + +
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666

Query: 383 VRFTYA 388
           +    A
Sbjct: 667 LERAVA 672



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 198/382 (51%), Gaps = 18/382 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++  ++  + K     + L+L +++  +  + P++  YS +I+  CK G+ S    
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I G C+  R  +A  L  ++      P+V+TYN LIN   
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L+ EM       G++  PNT+TY+ +IDG CK+  +D A+++F  M  + 
Sbjct: 337 KEGKFFEAAELYDEMLPR----GII--PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+V T+T+LI G+C A   ++   LL EM  +G+  N V+ N +++  C  G ++ A 
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 450

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-----------GCKHD 296
            L   M+   V P+  T NTL+DG C  GK+    E+F +M+             G + D
Sbjct: 451 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YNILI G     +  EA  LY E+P +GI P  +TY+++  GL +  + + A ++FV
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 570

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M     + +  T+ T I+G C
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYC 592



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TY+ +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+V TFT+LI G C   RI +   L  ++   G   N +TYNTLI+G C 
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L ++M +     GV   P+ VT + ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLSQQMISS----GVC--PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V+TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++   M      PN  T+NTL++G+C  G+++   ELF  M   G   D 
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  G +   + ERA+ +  +
Sbjct: 617 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             LIK  C+ S++  A + F K+   G  P+V+T+ TL++GLC       AL+ F +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TYN++  G  +  + + A  +F  M     + D  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++N L+  FC   K+      F  +  +G   D  ++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             ++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 CVR 380
           C +
Sbjct: 230 CKK 232


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  283 bits (725), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 225/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK K +D V+SL +++  + +   LYTY+ILINCFC+  Q+SL   +
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIV------------------------------ 98
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 99  -----EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+PN++TY  ++NGLC+ G T +ALNL  +M     E  VV 
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 ++ IID LCK   VD A  LF +M+ + + PNVVTY+SLI   C    W++A  
Sbjct: 263 ------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PN+V+ N +++   K GK   A +L D M++  + P+ FTYN+L++GFC
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  ++++ K++F  M S  C  D  +YN LI G+CK+K VE+   L+ E+  +G+    V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY TL  GLF     + A K+F +M  + V  D  TY   +DGLC
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L K +H D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +   ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+VTF +LI     E + VEA  L+  +     +P++ TYN+L+NG C      
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M + +      F P+ VTY+ +I G CK   V+   ELF +M +  L  + V
Sbjct: 383 KAKQMFEFMVSKD-----CF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LI G  H  D + A+ +  +MV  GV P++++ +++++ LC NGK++ A  + D M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + +++ + + Y T+++G C  GK++   +LF S+   G K +  +YN +I+G C  + +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +EA +L  ++   G  P   TYNTL            + +L  EM+      D  T
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +++  L K    D  L+L  ++ +  +  D+  ++ +I+  CK   V     +
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT++SLI  LC+  R  +A+ L + +      PN++T+N LI+   +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L+ +M      I     P+  TY+ +++G C    +DKAK++F  M  ++ 
Sbjct: 343 EGKFVEAEKLYDDM------IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI GFC +    +   L  EM  +G+  + V+   ++  L  +G  DNA +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V P+  TY+ L+DG C  GK+ +  E+F  M+    K D + Y  +I G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V++   L+  L  KG+KP VVTYNT+  GL   R  + A  L  +M+ +    ++ 
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 369 TYRTFI 374
           TY T I
Sbjct: 577 TYNTLI 582



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +    +     +L  K++       + TYN LIN  C
Sbjct: 72  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL L  +M      + + ++P+ VT S +++G C    +  A  L  QM    
Sbjct: 132 RRSQISLALALLGKM------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ +T+T+LIHG    N  +EA  L+  MV +G QPN+V+  V++N LCK G  D A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M    +  +   +NT++D  C    ++    LF  ME+ G + +  +Y+ LI+  
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L +++  K I P +VT+N L     +  +   A KL+ +M    +  D 
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + ++G C+  ++
Sbjct: 366 FTYNSLVNGFCMHDRL 381



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 72/135 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L  N   +  L +F  +    +  D+Y Y+ +I   CK G+V  G+ 
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNVVT+ ++I GLC++  + EA AL  K+K  G  PN  TYNTLI    
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586

Query: 128 RTGHTIVALNLFKEM 142
           R G    +  L +EM
Sbjct: 587 RDGDKAASAELIREM 601



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H    ++A GL   MV     P++V  N +++ + K  K D    L + M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           + ++    +TYN L++ FC   +I+    L   M  +G +    + + L+NGYC  K + 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A++L +++   G +P  +T+ TL HGLF   +A  A+ L   M       +  TY   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 375 DGLCVR 380
           +GLC R
Sbjct: 233 NGLCKR 238



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 107/229 (46%)

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G  F   +  Y  I+     +  +D A  LF  M      P++V +  L+        ++
Sbjct: 43  GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
               L  +M    +   + + N+++N  C+  ++  A  LL  M++    P+  T ++L+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G+C   +I+    L   M  MG + D  ++  LI+G   + +  EA++L + +  +G +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P +VTY  + +GL +    + AL L  +M+   + AD   + T ID LC
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 225/383 (58%), Gaps = 18/383 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY TV+SL +RL    + PD +T +ILINCFC +G
Sbjct: 57  MRHT----PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLG 112

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++L F +  +IL+  + P+ VT T+LIKGLC + ++ +A     KL A G   + ++Y 
Sbjct: 113 QINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYG 172

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+ L + +       G + +PN V Y+ IID LCK   V +A  LF
Sbjct: 173 TLINGVCKIGETRAAIQLLRRID------GRLTEPNVVMYNTIIDCLCKRKLVSEACNLF 226

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ NVVTY+++IHGFC      EA G L EMV + + P+V   N +++ L K 
Sbjct: 227 SEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKE 286

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L ++V+  ++PN  TYNTL+DG+         K +F ++  MG   D +SY
Sbjct: 287 GKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSY 338

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NI+IN  CK K VEEAL+LY E+  K + P  VTYN+L  GL +  +   A  L  EM  
Sbjct: 339 NIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHD 398

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
               A+  TY + I+GLC   Q+
Sbjct: 399 RGHHANVITYNSLINGLCKNGQL 421



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 189/353 (53%), Gaps = 15/353 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++ CL K K      +LF  ++  G+  ++ TYS +I+ FC +G+++   
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                ++     P+V  + +L+  L  E ++ EA  +   +     +PNVITYNTLI+G 
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
                        K + N  G +GV   P+  +Y+I+I+ LCK   V++A  L+ +M  +
Sbjct: 319 A------------KHVFNAVGLMGVT--PDVWSYNIMINRLCKIKRVEEALNLYKEMHQK 364

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ PN VTY SLI G C +   + A  L+ EM D+G   NV++ N ++N LCKNG++D A
Sbjct: 365 NMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKA 424

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK-INRVKELFVSMESMGCKHDDFSYNILIN 305
             L++ M    ++P+ +T N L+ G    GK +   + LF  +   G   + ++YNI+I 
Sbjct: 425 IALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIY 484

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           G+CK   ++EA +L +++   G  P  +T+  +   L E  + ++A KL  EM
Sbjct: 485 GHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 15/247 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+   AK+        +F  +  +G+ PD+++Y+I+IN  CK+ +V     +
Sbjct: 306 PNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNL 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + +    PN VT+ SLI GLC   RI  A  L  ++   G   NVITYN+LINGLC+
Sbjct: 358 YKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL-CKEGFVDKAKELFLQMKYEN 187
            G    A+ L  +M +         +P+  T +I++ GL CK   +  A+ LF  +  + 
Sbjct: 418 NGQLDKAIALINKMKDQG------IQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PNV TY  +I+G C     +EA  L  +M D G  PN ++  +I+  L + G+ D A 
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531

Query: 248 RLLDLMV 254
           +LL  M+
Sbjct: 532 KLLCEMI 538



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NI++  L K K  +  L+L+K ++   + P+  TY+ LI+  CK G++S  + +
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL-C 127
              +       NV+T+ SLI GLC   ++ +A AL  K+K  G +P++ T N L++GL C
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  LF+++ +        + PN  TY+III G CKEG +D+A  L  +M+   
Sbjct: 453 KGKRLKNAQGLFQDLLDKG------YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG 506

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            +PN +T+  +I       + ++A+ LL EM+ +G+
Sbjct: 507 CSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 97/207 (46%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           VD A   F +M      P ++ +  ++  F     +     L   +  + +QP+  + N+
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C  G+++ A  +L  +++   +P+  T  TL+ G CL G++ +       + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  SY  LING CK  E   A+ L   +  +  +P VV YNT+   L + +    A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCV 379
            LF EM    ++A+  TY   I G C+
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCI 250



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 7/182 (3%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P   ++N L+  L K+        L   ++  G   ++ TY+ LIN  CK GQ+
Sbjct: 362 HQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQL 421

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKG-LCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                +  ++      P++ T   L+ G LC   R+  A  LF  L   G  PNV TYN 
Sbjct: 422 DKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNI 481

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I G C+ G    A  L  +M +          PN +T+ III  L ++G  DKA++L  
Sbjct: 482 IIYGHCKEGLLDEAYALQSKMEDSGCS------PNAITFKIIICALLEKGETDKAEKLLC 535

Query: 182 QM 183
           +M
Sbjct: 536 EM 537



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 39/87 (44%)

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             +N +++ + K K     +SL   L  K I+P   T N L +    + Q   A  +  +
Sbjct: 64  IQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSK 123

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +       DT T  T I GLC++ QV+
Sbjct: 124 ILKWGYQPDTVTLTTLIKGLCLKGQVK 150


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/383 (38%), Positives = 229/383 (59%), Gaps = 7/383 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H +P+PP +  FN +L  L K KH+ T LSL +++   G+  D +T++ILINCF ++G
Sbjct: 61  LHHKNPTPPIIQ-FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLG 119

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             SL F +FG+IL+  F PN +TF +LIKGLC +  I +A     K+ A G   + ++Y 
Sbjct: 120 LNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYG 179

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G    AL L K +       G + +PN V Y++IID +CK   V+ A +L+
Sbjct: 180 TLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 233

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QM  + ++P+  T  SLI+GFC      EA GLL +M+ + + P + + +++++  CK 
Sbjct: 234 SQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKE 293

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L + ++ D+  +  TYN+LMDG+CL  +IN+ K++F SM S G   +  SY
Sbjct: 294 GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSY 353

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +ING CK K V+EA++L+ E+  + I P VVTYN+L  GL ++ +    LKL  EM  
Sbjct: 354 TTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHD 413

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                +  TY + +D LC    V
Sbjct: 414 RGQPPNIITYNSILDALCKNHHV 436



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+++  + K K  +    L+ ++ +  + PD +T + LI  FC MGQ+     +
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGL 267

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P + TF+ L+   C E ++ EA  +           +V+TYN+L++G C 
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +     GV+   N  +Y+ +I+GLCK   VD+A  LF +M+   +
Sbjct: 328 VKEINKAKDIFDSMASR----GVI--ANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI 381

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY SLI G       +    L+ EM D+G  PN+++ N I++ LCKN  +D A  
Sbjct: 382 IPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIA 441

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +RP+ +TY  L+ G C +GK+   +++F  +   G   D ++Y ++I G+C
Sbjct: 442 LLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFC 501

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                + AL+L +++   G  P   TY  +   LFE  + + A KL  EM
Sbjct: 502 VKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREM 551



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 154/285 (54%), Gaps = 6/285 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +YT+SIL++ FCK G+V    ++ G  ++     +VVT+ SL+ G C    I +A  +
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  + + G   NV +Y T+INGLC+      A+NLF+EM            PN VTY+ +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRK------IIPNVVTYNSL 391

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGL K G +    +L  +M      PN++TY S++   C  +  ++A  LL  + DQG+
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P++ +  V++  LC++GK+++A ++ + ++      + +TY  ++ GFC+ G  +    
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALA 511

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           L   ME  GC  +  +Y I+I    +  E + A  L  E+  +G+
Sbjct: 512 LLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N +L  L KN H D  ++L   L   G+ PD+YTY++LI   C+ G++
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   +  +V T+T +I+G C +     A AL +K++  GC PN  TY  +
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIV 531

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L       +A  L +EM
Sbjct: 532 ILSLFEKDENDMAEKLLREM 551



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 106/230 (46%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + ++ I+  L K      A  L  QM+   +  +  T+  LI+ F      + +  +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +++ +G  PN ++ N ++  LC  G +  A    D +V      +  +Y TL++G C 
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+I    +L   ++    + +   YN++I+  CK K V +A  LY+++  K I P   T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            N+L +G   + Q + A+ L  +M   ++     T+   +D  C   +V+
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVK 297


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 220/368 (59%), Gaps = 9/368 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SF IL+ C          LS F +L  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I R    P+V+TFT+L+ GLC E R+VEA AL  ++   G +P+ ITY T ++G+C+ G
Sbjct: 176 QICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M     EI  + KPN V YS IIDGLCK+G    +  LF++M+ + + P
Sbjct: 232 DTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+VTY  +I GFC +  W+ A+ LL EM+++ + PNVV+ N ++N   K GK   A+ L 
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TYN+++DGFC   +++  +++F  M + GC  D F++  LI+GYC  
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+P +G+    VTYNTL HG   +     AL L  +M  + V  D  T 
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 467 NTLLDGLC 474



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 207/372 (55%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L+G + + +  D V+SL++++    +  D+Y+++ILI CFC   ++      
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++ +    P+VVTFT+L+ GLC + R+ EA  LF ++    C P+V+T+ TL+NGLCR
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YEN 187
            G  + A+ L   M   NG      +P+ +TY   +DG+CK G    A  L  +M+   +
Sbjct: 195 EGRVVEAVALLDRMVE-NG-----LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNVV Y+++I G C     +++  L IEM D+G+ PN+V+ N ++   C +G+   A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RLL  M++  + PN  TYN L++ F   GK     EL+  M   G   +  +YN +I+G+
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  ++  +  KG  P V T+ TL  G    ++ +  ++L  EM    + A+T
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 368 CTYRTFIDGLCV 379
            TY T I G C+
Sbjct: 429 VTYNTLIHGFCL 440



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 203/411 (49%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L +       ++L  R+   GL PD  TY   ++  CKMG       +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 69  FGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             ++   S   PNVV ++++I GLC + R  ++  LF +++  G  PN++TYN +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 128 RTGHTIVALNLFKEM---------------TNGNGEIGVVFK--------------PNTV 158
            +G    A  L +EM                N   + G  F+              PNT+
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+ +IDG CK+  +D A+++F  M  +  +P+V T+T+LI G+C A   ++   LL EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G+  N V+ N +++  C  G ++ A  L   M+   V P+  T NTL+DG C  GK+
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 279 NRVKELFVSMESM-----------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
               E+F +M+             G + D  +YNILI G     +  EA  LY E+P +G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           I P  +TY+++  GL +  + + A ++FV M     + +  T+ T I+G C
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 202/434 (46%), Gaps = 52/434 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +    P V  ++ ++  L K+  +    +LF  +   G+FP++ TY+ +I  FC  G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           + S    +   +L    +PNVVT+ +LI     E +  EAA L+ ++   G  PN ITYN
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+G C+      A ++F  M            P+  T++ +IDG C    +D   EL 
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L  N VTY +LIHGFC   D N A  L  +M+  GV P++V+ N +++ LC N
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 241 GKMDNASRLLDLM---------------VQCDVR-------------------------- 259
           GK+ +A  +   M               V+ DV                           
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 260 -----PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+  TY++++DG C   +++   ++FVSM S     +  ++N LINGYCK   V+
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           + L L+ E+  +GI    + Y TL +G  ++     AL +F EM  + V  DT T R  +
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 375 DGLCVRPQVRFTYA 388
            G   + ++    A
Sbjct: 657 TGFWSKEELERAVA 670



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TY+ +I+ FCK  ++     +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+V TFT+LI G C   RI +   L  ++   G   N +TYNTLI+G C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L ++M +     GV   P+ VT + ++DGLC  G +  A E+F  M+    
Sbjct: 441 VGDLNAALDLSQQMISS----GVC--PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V+TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++   M      PN  T+NTL++G+C  G+++   ELF  M   G   D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  G +   + ERA+ +  +
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 358 MQ 359
           +Q
Sbjct: 675 LQ 676



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +++A  L   M++    P+   +N LM       + + V  L+  ME    + D +S+ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI  +C   ++  ALS + +L   G+ P VVT+ TL HGL    +   AL LF ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
              D  T+ T ++GLC   +V
Sbjct: 178 CRPDVLTFTTLMNGLCREGRV 198


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/369 (38%), Positives = 225/369 (60%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+SF+ LL  +   KHY +V+SLF+ ++ + +    +  SI++N  C M +  LGF +
Sbjct: 70  PSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
                +     N VTFT+LI+GL AE+++ +A  LF KL +   CEPN + Y T++NGLC
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLC 189

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GHT  A +L + M  G+       KPNT TY+I+ID  CK+G +D A  L  +MK ++
Sbjct: 190 KKGHTQKAFDLLRLMEQGST------KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++ TY++LI   C  + W   + L +EM+   + PNV + N +++ LCK GK+++A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++  M++  V P+  TYN ++DG+ L G+++R +E+F SM +   + D  SYNILINGY
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGY 363

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            + K+++EA+ +  E+  KG+KP++VT N L HGLFE+ + + A   F EM       D 
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423

Query: 368 CTYRTFIDG 376
            T+ T + G
Sbjct: 424 YTHCTLLGG 432



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 8/364 (2%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++ G  A+NK  D V  LFK+L    +  P+   Y  ++N  CK G     F +   + +
Sbjct: 148 LIRGLFAENKVKDAV-HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN  T+T +I   C +  +  A +L  ++K     P++ TY+TLI+ LC+      
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              LF EM + N        PN  T++ +IDGLCKEG V+ A+E+   M  + ++P+V+T
Sbjct: 267 VRTLFLEMIHLN------IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  +I G+      + A+ +   M+++ ++P+++S N+++N   +  K+D A ++   + 
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREIS 380

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           Q  ++P+  T N L+ G    G+    +  F  M S G   D +++  L+ GY KN  VE
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+S +++L  +     +  Y  +  GL +  + ++A   F ++    +  D  TY   I
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMI 500

Query: 375 DGLC 378
            G C
Sbjct: 501 SGYC 504



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P   ++ I++    K+   D   SL   +    + PD++TYS LI+  CK+ Q     
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++     PNV TF S+I GLC E ++ +A  +   +   G +P+VITYN +I+G 
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
              G    A  +F  M N + E      P+ ++Y+I+I+G  ++  +D+A ++  ++  +
Sbjct: 329 GLRGQVDRAREIFDSMINKSIE------PDIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P++VT   L+HG         A+    EM+  G  P++ +   ++    KNG ++ A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                 + +     N   Y  ++DG C  GK+++    F  +  +G   D  +Y  +I+G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC+   ++EA  +  ++   G      TYN +  G     +         E+ G   + +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFE 562

Query: 367 TCTYRTFIDGLCVRPQV 383
             T    +D +   P +
Sbjct: 563 AATVELLMDIIAEDPSI 579



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 7/286 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A +LF ++      P+V +++ L+  +    H    ++LF+E+        +    +  
Sbjct: 55  DAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK------LRIPVHEF 108

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
             SI+++  C     D    +      + +  N VT+T+LI G    N   +A  L  ++
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 219 VDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           V + + +PN V    +MN LCK G    A  LL LM Q   +PN  TY  ++D FC  G 
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGM 228

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   M+      D F+Y+ LI+  CK  + E   +L+ E+    I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  GL +  + E A ++   M    V  D  TY   IDG  +R QV
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQV 334



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 5/160 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            V+ N   SN   N  C    +D+A  L   MV+    P+  +++ L+         + V
Sbjct: 36  SVKGNFGVSNEFQNVKC----LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSV 91

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             LF  +  +     +F  +I++N  C     +   S+      KGI    VT+ TL  G
Sbjct: 92  VSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151

Query: 342 LFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLCVR 380
           LF   + + A+ LF ++ + N    +   Y T ++GLC +
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKK 191


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 220/368 (59%), Gaps = 9/368 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SF IL+ C          LS F +L  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I R    P+V+TFT+L+ GLC E R+VEA AL  ++   G +P+ ITY T ++G+C+ G
Sbjct: 176 QICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M     EI  + KPN V YS IIDGLCK+G    +  LF++M+ + + P
Sbjct: 232 DTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+VTY  +I GFC +  W+ A+ LL EM+++ + PNVV+ N ++N   K GK   A+ L 
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TYN+++DGFC   +++  +++F  M + GC  D F++  LI+GYC  
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+P +G+    VTYNTL HG   +     AL L  +M  + V  D  T 
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 467 NTLLDGLC 474



 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 207/372 (55%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L+G + + +  D V+SL++++    +  D+Y+++ILI CFC   ++      
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++ +    P+VVTFT+L+ GLC + R+ EA  LF ++    C P+V+T+ TL+NGLCR
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YEN 187
            G  + A+ L   M   NG      +P+ +TY   +DG+CK G    A  L  +M+   +
Sbjct: 195 EGRVVEAVALLDRMVE-NG-----LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNVV Y+++I G C     +++  L IEM D+G+ PN+V+ N ++   C +G+   A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RLL  M++  + PN  TYN L++ F   GK     EL+  M   G   +  +YN +I+G+
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  ++  +  KG  P V T+ TL  G    ++ +  ++L  EM    + A+T
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 368 CTYRTFIDGLCV 379
            TY T I G C+
Sbjct: 429 VTYNTLIHGFCL 440



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 205/416 (49%), Gaps = 41/416 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L +       ++L  R+   GL PD  TY   ++  CKMG       +
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 69  FGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             ++   S   PNVV ++++I GLC + R  ++  LF +++  G  PN++TYN +I G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 128 RTGHTIVALNLFKEM---------------TNGNGEIGVVFK--------------PNTV 158
            +G    A  L +EM                N   + G  F+              PNT+
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+ +IDG CK+  +D A+++F  M  +  +P+V T+T+LI G+C A   ++   LL EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G+  N V+ N +++  C  G ++ A  L   M+   V P+  T NTL+DG C  GK+
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 279 NRVKELFVSMESM-----------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
               E+F +M+             G + D  +YNILI G     +  EA  LY E+P +G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           I P  +TY+++  GL +  + + A ++FV M     + +  T+ T I+G C   +V
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 202/434 (46%), Gaps = 52/434 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +    P V  ++ ++  L K+  +    +LF  +   G+FP++ TY+ +I  FC  G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           + S    +   +L    +PNVVT+ +LI     E +  EAA L+ ++   G  PN ITYN
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+G C+      A ++F  M            P+  T++ +IDG C    +D   EL 
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L  N VTY +LIHGFC   D N A  L  +M+  GV P++V+ N +++ LC N
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 241 GKMDNASRLLDLM---------------VQCDVR-------------------------- 259
           GK+ +A  +   M               V+ DV                           
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 260 -----PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+  TY++++DG C   +++   ++FVSM S     +  ++N LINGYCK   V+
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           + L L+ E+  +GI    + Y TL +G  ++     AL +F EM  + V  DT T R  +
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 375 DGLCVRPQVRFTYA 388
            G   + ++    A
Sbjct: 657 TGFWSKEELERAVA 670



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TY+ +I+ FCK  ++     +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+V TFT+LI G C   RI +   L  ++   G   N +TYNTLI+G C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L ++M +     GV   P+ VT + ++DGLC  G +  A E+F  M+    
Sbjct: 441 VGDLNAALDLSQQMISS----GVC--PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V+TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++   M      PN  T+NTL++G+C  G+++   ELF  M   G   D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  G +   + ERA+ +  +
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 358 MQ 359
           +Q
Sbjct: 675 LQ 676



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +++A  L   M++    P+   +N LM       + + V  L+  ME    + D +S+ I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI  +C   ++  ALS + +L   G+ P VVT+ TL HGL    +   AL LF ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
              D  T+ T ++GLC   +V
Sbjct: 178 CRPDVLTFTTLMNGLCREGRV 198


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 224/376 (59%), Gaps = 6/376 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   PP   F  +LG L K K Y T LSL +++   G+ PD  T ++L+NCF ++G +
Sbjct: 50  HKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +F +IL+  + P+ VTFT LIKGLC +  + +A     K+ A G + + ++Y TL
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLCR G T  A+ L + +       G + +PN V YS IID +CK+  V+ A +L+ +
Sbjct: 170 INGLCRVGETKAAVQLLRRVD------GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P+VVTY+SLI GFC       A  L   M+   + PNV + +++++  CK GK
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +L +M++ +V+ +  TYN+LMDG+CL  ++N+ K LF  M   G   D +SY+I
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +ING+CK K V+EA+ L+ E+  K I P VVTYN+L  GL +  +   AL+L  EM    
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 363 VAADTCTYRTFIDGLC 378
             ++  TY + +D +C
Sbjct: 404 QPSNIITYNSILDAIC 419



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 198/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F IL+  L         L    ++ + G   D  +Y  LIN  C++G+      +
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV ++++I  +C +  + +A  L+ ++ +    P+V+TY++LI+G C 
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF  M + N        PN  T+SI+IDG CKEG V +AK +   M  +N+
Sbjct: 246 VGKLKYAVDLFNRMISDN------INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY SL+ G+C     N+AK L   M  +GV P+V S ++++N  CK   +D A +
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMK 359

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    + PN  TYN+L+DG C +G+ +   EL   M   G   +  +YN +++  C
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  V++A+ L  ++  KGI+P + TY  L +GL ++ + + A K+F ++     + +  
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 369 TYRTFIDGLC 378
           TY + I+G C
Sbjct: 480 TYTSLINGFC 489



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 195/350 (55%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  + K+K  +    L+  + S  + PD+ TYS LI+ FC +G++     +
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++     PNV TF+ LI G C E ++ EA  +   +     + +V+TYN+L++G C 
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +LF  M     + GV   P+  +YSI+I+G CK   VD+A +LF +M  + +
Sbjct: 316 VKQVNKAKSLFNVM----AQRGVT--PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY SL+ G C +   + A  L+ EM D+G   N+++ N I++ +CKN  +D A  
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +  ++P+ FTY  L++G C  G+++  +++F  +   G   + ++Y  LING+C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                +E L++ +++   G  P  +TY  L H LFE  + ++A KL  EM
Sbjct: 490 NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 179/323 (55%), Gaps = 9/323 (2%)

Query: 7   SPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP  V+  +++ G C+     Y   + LF R+ S  + P++YT+SILI+ FCK G+V   
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKY--AVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +++     +VVT+ SL+ G C   ++ +A +LF  +   G  P+V +Y+ +ING
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+      A+ LF+EM         +F PN VTY+ ++DGLCK G    A EL  +M  
Sbjct: 348 FCKIKMVDEAMKLFEEM-----HCKQIF-PNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                N++TY S++   C  N  ++A  LL ++ ++G+QP++ +  V++N LCK G++D+
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A ++ + ++     PN +TY +L++GFC  G  +    +   M+  GC  +  +Y ILI+
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521

Query: 306 GYCKNKEVEEALSLYNELPFKGI 328
              +  E ++A  L  E+  +G+
Sbjct: 522 SLFEKDENDKAEKLLREMIARGL 544



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 135/271 (49%), Gaps = 8/271 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           P  I +  ++  L +      AL+L ++M  NG        KP+ +T +++++   + G 
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNG-------IKPDFITCNLLMNCFSQLGH 108

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +  +  +F ++  +  +P+ VT+T LI G C   + ++A     ++V QG Q + VS   
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N LC+ G+   A +LL  +    VRPN   Y+T++D  C    +N   +L+  M S  
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D  +Y+ LI+G+C   +++ A+ L+N +    I P V T++ L  G  +  +   A 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +   M   +V  D  TY + +DG C+  QV
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQV 319



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 77/140 (55%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  + ++N +L  + KN H D  + L  ++   G+ PD++TY++LIN  CK+G++
Sbjct: 400 HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRL 459

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   ++PN+ T+TSLI G C +    E  A+ +K+K  GC PN ITY  L
Sbjct: 460 DDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEIL 519

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I+ L        A  L +EM
Sbjct: 520 IHSLFEKDENDKAEKLLREM 539



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF  + + N  I     P  + +  I+  L K      A  L  QM++  + P+ +T   
Sbjct: 44  LFNRLLHKNNPI-----PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNL 98

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L++ F        +  +  +++ +G  P+ V+  +++  LC  G++  A    D +V   
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            + +  +Y TL++G C  G+     +L   ++    + +   Y+ +I+  CK+K V +A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            LY E+  K I P VVTY++L  G   + + + A+ LF  M  +++  +  T+   IDG 
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 378 CVRPQVR 384
           C   +VR
Sbjct: 279 CKEGKVR 285



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 97/197 (49%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P  + +  ++     A  +  A  L  +M   G++P+ ++ N++MN   + G +  +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              +++    P+A T+  L+ G CL G++++       + + G + D  SY  LING C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             E + A+ L   +  K ++P VV Y+T+   + + +    A  L+ EM    ++ D  T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 370 YRTFIDGLCVRPQVRFT 386
           Y + I G CV  ++++ 
Sbjct: 236 YSSLISGFCVVGKLKYA 252


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 42/411 (10%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P V  F+ L   +AK K YD VL+L K++   G+  +LYT SI+INCFC+  ++
Sbjct: 80  IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------- 97
            L F   G+I++  + PN +TF++LI GLC E R+                         
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199

Query: 98  ----------VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
                      EA  L  K+  +GC+PN +TY  ++N +C++G T +A+ L ++M   N 
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN- 258

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                 K + V YSIIIDGLCK G +D A  LF +M+ + +  N++TY  LI GFC+A  
Sbjct: 259 -----IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           W++   LL +M+ + + PNVV+ +V+++   K GK+  A  L   M+   + P+  TY +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+DGFC    +++  ++   M S GC  +  ++NILINGYCK   +++ L L+ ++  +G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +    VTYNTL  G  E+ +   A +LF EM    V  +  TY+  +DGLC
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++I++  L K+   D   +LF  +   G+  ++ TY+ILI  FC  G+   G  +   ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    PNVVTF+ LI     E ++ EA  L  ++   G  P+ ITY +LI+G C+  H  
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +   M +   +      PN  T++I+I+G CK   +D   ELF +M    +  + V
Sbjct: 386 KANQMVDLMVSKGCD------PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI GFC     N AK L  EMV + V PN+V+  ++++ LC NG+ + A  + + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +  +   YN ++ G C   K++   +LF S+   G K    +YNI+I G CK   +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ ++   G  P   TYN L         A +++KL  E++    + D  T +  
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619

Query: 374 IDGL 377
           ID L
Sbjct: 620 IDML 623



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 12/313 (3%)

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S F+   +++   ++    + +  +A  LF  +      P VI ++ L + + +T    +
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC---KEGFVDKAKELFLQMKYENLNPN 191
            L L K+M             N  T SI+I+  C   K      A    +++ YE   PN
Sbjct: 107 VLALCKQMELKG------IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE---PN 157

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            +T+++LI+G C     +EA  L+  MV+ G +P++++ N ++N LC +GK   A  L+D
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            MV+   +PNA TY  +++  C +G+     EL   ME    K D   Y+I+I+G CK+ 
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            ++ A +L+NE+  KGI   ++TYN L  G     + +   KL  +M    +  +  T+ 
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337

Query: 372 TFIDGLCVRPQVR 384
             ID      ++R
Sbjct: 338 VLIDSFVKEGKLR 350



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 6/169 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++ ILL  L  N   +  L +F+++    +  D+  Y+I+I+  C   +V   + 
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P V T+  +I GLC +  + EA  LF K++  G  P+  TYN LI    
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
             G    ++ L +E+       G     +T+   I  + DG  K+ F+D
Sbjct: 590 GDGDATKSVKLIEELK----RCGFSVDASTIKMVIDMLSDGRLKKSFLD 634


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 235/422 (55%), Gaps = 46/422 (10%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P +  F+ LL  +AK   +D V+SL +++ ++G+  + YTYSILINCFC+  Q+ L   +
Sbjct: 693  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
             G++++  + PN+VT +SL+ G C   RI EA AL                         
Sbjct: 753  LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812

Query: 104  ----------FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                        ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E GV+ 
Sbjct: 813  HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872

Query: 154  KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                  Y+ IIDGLCK   +D A  LF +M+ + + PNVVTY+SLI   C+   W++A  
Sbjct: 873  ------YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 926

Query: 214  LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            LL +M+++ + P+V + + +++   K GK+  A +L D MV+  + P+  TY++L++GFC
Sbjct: 927  LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 986

Query: 274  LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +  +++  K++F  M S  C  D  +YN LI G+CK K VEE + ++ E+  +G+    V
Sbjct: 987  MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046

Query: 334  TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
            TYN L  GLF+    + A ++F EM  + V  +  TY T +DGLC      +  V F Y 
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106

Query: 389  RR 390
            +R
Sbjct: 1107 QR 1108



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/380 (34%), Positives = 216/380 (56%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  + K K YD V+SL K++  +G+  DLYT++I+INCFC   QVSL   I
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++L+  + P+ VT  SL+ G C  +R+ +A +L  K+   G +P+++ YN +I+ LC+
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A + FKE+           +PN VTY+ +++GLC       A  L   M  + +
Sbjct: 306 TKRVNDAFDFFKEIERKG------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++L+  F       EAK L  EMV   + P++V+ + ++N LC + ++D A++
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV      +  +YNTL++GFC   ++    +LF  M   G   +  +YN LI G+ 
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 479

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V++A   ++++ F GI P + TYN L  GL +  + E+AL +F +MQ  ++  D  
Sbjct: 480 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 539

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY T I G+C   +V   ++
Sbjct: 540 TYTTVIRGMCKTGKVEEAWS 559



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  +N ++  L K KH D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               ++     P+V TF++LI     E ++VEA  L+ ++     +P+++TY++LING C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  A  +F+ M + +      F P+ VTY+ +I G CK   V++  E+F +M    L
Sbjct: 988  HDRLDEAKQMFEFMVSKH-----CF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              N VTY  LI G   A D + A+ +  EMV  GV PN+++ N +++ LCKNGK++ A  
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 1101

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            + + + +  + P  +TYN +++G C  GK+    +LF ++   G K D  +YN +I+G+C
Sbjct: 1102 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 1161

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +    EEA +L+ E+   G  P    YNTL          E + +L  EM+    A D  
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 1221

Query: 369  T 369
            T
Sbjct: 1222 T 1222



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 41/401 (10%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN L+  L  +      ++L  R+ + G  PDL TY +++N  CK G   L F +
Sbjct: 798  PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +    P V+ + ++I GLC    + +A  LF +++  G  PNV+TY++LI+ LC 
Sbjct: 858  LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  L  +M      I     P+  T+S +ID   KEG + +A++L+ +M   ++
Sbjct: 918  YGRWSDASRLLSDM------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK--------- 239
            +P++VTY+SLI+GFC  +  +EAK +   MV +   P+VV+ N ++   CK         
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 240  --------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                       G  D A  +   MV   V PN  TYNTL+DG C
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 274  LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              GK+ +   +F  ++    +   ++YNI+I G CK  +VE+   L+  L  KG+KP VV
Sbjct: 1092 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 1151

Query: 334  TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             YNT+  G       E A  LF EM+ +    ++  Y T I
Sbjct: 1152 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 42/363 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +   P  V+  +++ G   +N+  D V SL  ++  IG  PD+  Y+ +I+  CK  
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V+  F  F  I R    PNVVT+T+L+ GLC  SR  +AA L + +      PNVITY+
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE-- 178
            L++   + G  + A  LF+EM      + +   P+ VTYS +I+GLC    +D+A +  
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEM------VRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421

Query: 179 ---------------------------------LFLQMKYENLNPNVVTYTSLIHGFCHA 205
                                            LF +M    L  N VTY +LI GF  A
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 481

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A+    +M   G+ P++ + N+++  LC NG+++ A  + + M + ++  +  TY
Sbjct: 482 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 541

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            T++ G C TGK+     LF S+   G K D  +Y  +++G C    + E  +LY ++  
Sbjct: 542 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 601

Query: 326 KGI 328
           +G+
Sbjct: 602 EGL 604



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 205/432 (47%), Gaps = 58/432 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +  +     L   +    + P++ TYS L++ F K G+V     +
Sbjct: 326 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 385

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P++VT++SLI GLC   RI EA  +F  + + GC  +V++YNTLING C+
Sbjct: 386 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 445

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF+EM+    + G+V   NTVTY+ +I G  + G VDKA+E F QM +  +
Sbjct: 446 AKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 499

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY  L+ G C   +  +A  +  +M  + +  ++V+   ++  +CK GK++ A  
Sbjct: 500 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 559

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD----------- 297
           L   +    ++P+  TY T+M G C  G ++ V+ L+  M+  G   +D           
Sbjct: 560 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLS 619

Query: 298 -----------FSYNILIN---GYCKNK---------------------------EVEEA 316
                      ++ ++L +   G CK                             ++++A
Sbjct: 620 AELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDA 679

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++L+ E+      P+++ ++ L   + ++ + +  + L  +MQ   +  +  TY   I+ 
Sbjct: 680 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 739

Query: 377 LCVRPQVRFTYA 388
            C R Q+    A
Sbjct: 740 FCRRSQLPLALA 751



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 196/416 (47%), Gaps = 46/416 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NILLG L  N   +  L +F+ +    +  D+ TY+ +I   CK G+V   + +
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN-------- 120
           F  +      P++VT+T+++ GLC +  + E  AL+TK+K  G   N  T +        
Sbjct: 561 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 620

Query: 121 TLINGLCRTGHTIV------------ALNLFKEMT-------------NGNGEI------ 149
            LI  +   G+               AL+L +  +             NG  E+      
Sbjct: 621 ELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAV 680

Query: 150 ---GVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
              G + K    P+ + +S ++  + K    D    L  QM+   +  N  TY+ LI+ F
Sbjct: 681 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C  +    A  +L +M+  G +PN+V+ + ++N  C + ++  A  L+D M     +PN 
Sbjct: 741 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            T+NTL+ G  L  K +    L   M + GC+ D  +Y +++NG CK  + + A +L N+
Sbjct: 801 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 860

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +    ++P V+ YNT+  GL + +  + AL LF EM+   +  +  TY + I  LC
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 194/420 (46%), Gaps = 62/420 (14%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC------------- 57
           + ++  ++  + K    +   SLF  L+  GL PD+ TY+ +++  C             
Sbjct: 538 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 597

Query: 58  KM--------------GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------- 92
           KM              G ++L   +  ++L   +AP+++    +  G+C           
Sbjct: 598 KMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK--DIKSGVCKKALSLLRAFS 655

Query: 93  ----------------AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
                           +E ++ +A ALF ++      P++I ++ L++ + +     V +
Sbjct: 656 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 715

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L ++M N    +G+    N  TYSI+I+  C+   +  A  +  +M      PN+VT +
Sbjct: 716 SLGEQMQN----LGI--PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS 769

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SL++G+CH+   +EA  L+ +M   G QPN V+ N +++ L  + K   A  L+D MV  
Sbjct: 770 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +P+  TY  +++G C  G  +    L   ME    +     YN +I+G CK K +++A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           L+L+ E+  KGI+P VVTY++L   L    +   A +L  +M    +  D  T+   ID 
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 41/316 (12%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           ++ +A  LF+ +      P+++ +N L++ + +     V ++L K+M      +G+  + 
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RN 221

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  T++I+I+  C    V  A  +  +M      P+ VT  SL++GFC  N  ++A  L+
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 216 IEMVD-----------------------------------QGVQPNVVSSNVIMNELCKN 240
            +MV+                                   +G++PNVV+   ++N LC +
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            +  +A+RLL  M++  + PN  TY+ L+D F   GK+   KELF  M  M    D  +Y
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LING C +  ++EA  +++ +  KG    VV+YNTL +G  + ++ E  +KLF EM  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 361 NDVAADTCTYRTFIDG 376
             + ++T TY T I G
Sbjct: 462 RGLVSNTVTYNTLIQG 477



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 9/245 (3%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N L+    K K  +  + +F+ ++  GL  +  TY+ILI    + G   +   I
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  ++     PN++T+ +L+ GLC   ++ +A  +F  L+    EP + TYN +I G+C+
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G      +LF  ++      GV  KP+ V Y+ +I G C++G  ++A  LF +MK +  
Sbjct: 1128 AGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 1181

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             PN   Y +LI       D   +  L+ EM   G   +  +  ++ N L  +G++D +  
Sbjct: 1182 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 1238

Query: 249  LLDLM 253
             LD++
Sbjct: 1239 FLDML 1243



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 71/135 (52%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP + ++N LL  L KN   +  + +F+ L    + P +YTY+I+I   CK G+V  G+ 
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +F  +      P+VV + ++I G C +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196

Query: 128  RTGHTIVALNLFKEM 142
            R G    +  L KEM
Sbjct: 1197 RDGDREASAELIKEM 1211


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 225/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK K +D V+SL +++  +G+  +LYTY+ILINCFC+  Q+SL   +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIV------------------------------ 98
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 99  -----EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M     E  VV 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 ++ IID LCK   VD A  LF +M+ + + PNVVTY+SLI   C    W++A  
Sbjct: 188 ------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PN+V+ N +++   K GK   A +L D M++  + P+ FTYN+L++GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  ++++ K++F  M S  C  D  +YN LI G+CK+K VE+   L+ E+  +G+    V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY TL  GLF     + A K+F +M  + V  D  TY   +DGLC
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 6/356 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L K +H D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +   ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+VTF +LI     E + VEA  L   +     +P++ TYN+LING C      
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M + +      F P+  TY+ +I G CK   V+   ELF +M +  L  + V
Sbjct: 308 KAKQMFEFMVSKD-----CF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LI G  H  D + A+ +  +MV  GV P++++ +++++ LC NGK++ A  + D M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + +++ + + Y T+++G C  GK++   +LF S+   G K +  +YN +I+G C  + +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +EA +L  ++   G  P   TYNTL            + +L  EM+      D  T
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 197/409 (48%), Gaps = 42/409 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  ++   ++ G    NK  + V +L  R+   G  P+L TY +++N  CK G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            + L F +  ++  +    +VV F ++I  LC    + +A  LF +++  G  PNV+TY+
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+ LC  G    A  L  +M      I     PN VT++ +ID   KEG   +A++L 
Sbjct: 225 SLISCLCSYGRWSDASQLLSDM------IEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK- 239
             M   +++P++ TY SLI+GFC  +  ++AK +   MV +   P++ + N ++   CK 
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338

Query: 240 ----------------------------------NGKMDNASRLLDLMVQCDVRPNAFTY 265
                                             +G  DNA ++   MV   V P+  TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           + L+DG C  GK+ +  E+F  M+    K D + Y  +I G CK  +V++   L+  L  
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           KG+KP VVTYNT+  GL   R  + A  L  +M+ +    D+ TY T I
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 6/305 (1%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P++  F  L+  +    +     +L  K++  G   N+ TYN LIN  CR     +AL L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             +M      + + ++P+ VT S +++G C    +  A  L  QM      P+ +T+T+L
Sbjct: 68  LGKM------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           IHG    N  +EA  L+  MV +G QPN+V+  V++N LCK G +D A  LL+ M    +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
             +   +NT++D  C    ++    LF  ME+ G + +  +Y+ LI+  C      +A  
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L +++  K I P +VT+N L     +  +   A KL  +M    +  D  TY + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 379 VRPQV 383
           +  ++
Sbjct: 302 MHDRL 306



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 72/135 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L  N   +  L +F  +    +  D+Y Y+ +I   CK G+V  G+ 
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNVVT+ ++I GLC++  + EA AL  K+K  G  P+  TYNTLI    
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 128 RTGHTIVALNLFKEM 142
           R G    +  L +EM
Sbjct: 512 RDGDKAASAELIREM 526



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 83/170 (48%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV     P++   N +++ + K  K D    L + M +  +  N +TYN L++ FC   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           I+    L   M  +G +    + + L+NGYC  K + +A++L +++   G +P  +T+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           L HGLF   +A  A+ L   M       +  TY   ++GLC R  +   +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 227/405 (56%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK K +D V+SL +R+ ++ +  DLY+Y+ILINCFC+  Q+ L   +
Sbjct: 78  PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
            G++++  + P++VT +SL+ G C   RI                               
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+P+++TY  ++NGLC+ G   +AL+L K+M  G  E  VV 
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IIDGLCK   +D A  LF +M+ + + P+V TY SLI   C+   W++A  
Sbjct: 258 ------YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL  M+++ + PNVV+ + +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +YN LI G+CK K VEE + L+ E+  +G+    V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  GLF+    + A K+F +M  + V  D  TY   +DGLC
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 194/364 (53%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L K KH D   +LF ++ + G+ PD++TY+ LI+C C  G+ S    +   ++
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF++LI     E ++VEA  L+ ++     +P++ TY++LING C      
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A ++F+ M + +      F PN VTY+ +I G CK   V++  ELF +M    L  N V
Sbjct: 378 EAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G   A D + A+ +  +MV  GV P++++ +++++ LCK GK++ A  + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+ +TYN +++G C  GK+    +LF S+   G K +   Y  +I+G+C+    
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA +L+ E+   G  P    YNTL            + +L  EM+      D  T    
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 374 IDGL 377
           I+ L
Sbjct: 612 INML 615



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 193/371 (52%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +FN L+ G    NK  + V +L  ++   G  PDL TY  ++N  CK G + L   
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++ +     +VV + ++I GLC    I +A ALF K++  G  P+V TYN+LI+ LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L   M      I     PN VT+S +ID   KEG + +A++L+ +M   +
Sbjct: 302 NYGRWSDASRLLSNM------IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           ++P++ TY+SLI+GFC  +  +EAK +   M+ +   PNVV+ N ++   CK  +++   
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M Q  +  N  TYNTL+ G    G  +  +++F  M S G   D  +Y+IL++G 
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  ++E+AL ++  L    ++P + TYN +  G+ +  + E    LF  +    V  + 
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535

Query: 368 CTYRTFIDGLC 378
             Y T I G C
Sbjct: 536 IIYTTMISGFC 546



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++  L K    D  LSL K++    +  D+  Y+ +I+  CK   +   F +
Sbjct: 218 PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL 277

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+V T+ SLI  LC   R  +A+ L + +      PNV+T++ LI+   +
Sbjct: 278 FNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK 337

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L+ EM      I     P+  TYS +I+G C    +D+AK +F  M  ++ 
Sbjct: 338 EGKLVEAEKLYDEM------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY +LI GFC A    E   L  EM  +G+  N V+ N ++  L + G  D A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V P+  TY+ L+DG C  GK+ +   +F  ++    + D ++YNI+I G C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +VE+   L+  L  KG+KP V+ Y T+  G       E A  LF EM+ +    D+ 
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 571

Query: 369 TYRTFI 374
            Y T I
Sbjct: 572 CYNTLI 577



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 159/316 (50%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +    +     +L  +++      ++ +YN LIN  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + ++P+ VT S +++G C    +  A  L  QM    
Sbjct: 127 RRSQLPLALAVLGKM------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VT+ +LIHG    N  +EA  L+ +MV +G QP++V+   ++N LCK G +D A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  +  +   YNT++DG C    I+    LF  ME+ G + D F+YN LI+  
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L + +  + I P VVT++ L     +  +   A KL+ EM    +  D 
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + I+G C+  ++
Sbjct: 361 FTYSSLINGFCMHDRL 376



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 10/176 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L K    +  L +F+ L    + PD+YTY+I+I   CK G+V  G+ 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNV+ +T++I G C +    EA ALF ++K  G  P+   YNTLI    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           R G    +  L KEM +        F  +  T S++I+ L  +G ++K+   +L+M
Sbjct: 582 RDGDKAASAELIKEMRSCG------FVGDASTISMVINML-HDGRLEKS---YLEM 627


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  280 bits (717), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 235/422 (55%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK   +D V+SL +++ ++G+  + YTYSILINCFC+  Q+ L   +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA--------------------------- 101
            G++++  + PN+VT +SL+ G C   RI EA                            
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 102 --------ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                   AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E GV+ 
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IIDGLCK   +D A  LF +M+ + + PNVVTY+SLI   C+   W++A  
Sbjct: 259 ------YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + P+V + + +++   K GK+  A +L D MV+  + P+  TY++L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K++F  M S  C  D  +YN LI G+CK K VEE + ++ E+  +G+    V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
           TYN L  GLF+    + A ++F EM  + V  +  TY T +DGLC      +  V F Y 
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492

Query: 389 RR 390
           +R
Sbjct: 493 QR 494



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K KH D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V TF++LI     E ++VEA  L+ ++     +P+++TY++LING C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M + +      F P+ VTY+ +I G CK   V++  E+F +M    L
Sbjct: 374 HDRLDEAKQMFEFMVSKH-----CF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY  LI G   A D + A+ +  EMV  GV PN+++ N +++ LCKNGK++ A  
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +  + P  +TYN +++G C  GK+    +LF ++   G K D  +YN +I+G+C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    EEA +L+ E+   G  P    YNTL          E + +L  EM+    A D  
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607

Query: 369 T 369
           T
Sbjct: 608 T 608



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 41/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L  +      ++L  R+ + G  PDL TY +++N  CK G   L F +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    P V+ + ++I GLC    + +A  LF +++  G  PNV+TY++LI+ LC 
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  +M      I     P+  T+S +ID   KEG + +A++L+ +M   ++
Sbjct: 304 YGRWSDASRLLSDM------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK--------- 239
           +P++VTY+SLI+GFC  +  +EAK +   MV +   P+VV+ N ++   CK         
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 240 --------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                      G  D A  +   MV   V PN  TYNTL+DG C
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+ +   +F  ++    +   ++YNI+I G CK  +VE+   L+  L  KG+KP VV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            YNT+  G       E A  LF EM+ +    ++  Y T I
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 174/371 (46%), Gaps = 46/371 (12%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +FG +++S   P+++ F+ L+  +   ++     +L  +++  G   N  TY+ LIN  
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR     +AL +  +M      + + ++PN VT S +++G C    + +A  L  QM   
Sbjct: 127 CRRSQLPLALAVLGKM------MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN VT+ +LIHG    N  +EA  L+  MV +G QP++V+  V++N LCK G  D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK------------ 294
             LL+ M Q  + P    YNT++DG C    ++    LF  ME+ G +            
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 295 -----------------------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
                                   D F+++ LI+ + K  ++ EA  LY+E+  + I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FT 386
           +VTY++L +G     + + A ++F  M       D  TY T I G C   +V      F 
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 387 YARRKGNSGNT 397
              ++G  GNT
Sbjct: 421 EMSQRGLVGNT 431



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 149/285 (52%), Gaps = 6/285 (2%)

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +E ++ +A ALF ++      P++I ++ L++ + +     V ++L ++M N    +G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              N  TYSI+I+  C+   +  A  +  +M      PN+VT +SL++G+CH+   +EA 
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ +M   G QPN V+ N +++ L  + K   A  L+D MV    +P+  TY  +++G 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G  +    L   ME    +     YN +I+G CK K +++AL+L+ E+  KGI+P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           VTY++L   L    +   A +L  +M    +  D  T+   ID  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 9/245 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K K  +  + +F+ ++  GL  +  TY+ILI    + G   +   I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN++T+ +L+ GLC   ++ +A  +F  L+    EP + TYN +I G+C+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +LF  ++      GV  KP+ V Y+ +I G C++G  ++A  LF +MK +  
Sbjct: 514 AGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN   Y +LI       D   +  L+ EM   G   +  +  ++ N L  +G++D +  
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 624

Query: 249 LLDLM 253
            LD++
Sbjct: 625 FLDML 629



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 2/167 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N LL  L KN   +  + +F+ L    + P +YTY+I+I   CK G+V  G+ 
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VV + ++I G C +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           R G    +  L KEM +  G  G       VT +++ DG   + F+D
Sbjct: 583 RDGDREASAELIKEMRSC-GFAGDASTIGLVT-NMLHDGRLDKSFLD 627



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 89/179 (49%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A  L  EMV     P+++  + +++ + K  K D    L + M    +  N +TY+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++ FC   ++     +   M  +G + +  + + L+NGYC +K + EA++L +++   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +P  VT+NTL HGLF   +A  A+ L   M       D  TY   ++GLC R      +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 104/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  + ++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A  +L  M++    PN  T ++L++G+C + +I+    L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  ++N LI+G   + +  EA++L + +  KG +P +VTY  + +GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   +      Y T IDGLC
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLC 267


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  280 bits (717), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 42/411 (10%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P V  F+ L   +AK K YD VL+L K++   G+  +LYT SI+INCFC+  ++
Sbjct: 178 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 237

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------- 97
            L F   G+I++  + PN +TF++LI GLC E R+                         
Sbjct: 238 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297

Query: 98  ----------VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
                      EA  L  K+  +GC+PN +TY  ++N +C++G T +A+ L ++M   N 
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN- 356

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                 K + V YSIIIDGLCK G +D A  LF +M+ + +  N++TY  LI GFC+A  
Sbjct: 357 -----IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           W++   LL +M+ + + PNVV+ +V+++   K GK+  A  L   M+   + P+  TY +
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+DGFC    +++  ++   M S GC  +  ++NILINGYCK   +++ L L+ ++  +G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +    VTYNTL  G  E+ +   A +LF EM    V  +  TY+  +DGLC
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 582



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++I++  L K+   D   +LF  +   G+  ++ TY+ILI  FC  G+   G  +   ++
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    PNVVTF+ LI     E ++ EA  L  ++   G  P+ ITY +LI+G C+  H  
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +   M +   +      PN  T++I+I+G CK   +D   ELF +M    +  + V
Sbjct: 484 KANQMVDLMVSKGCD------PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI GFC     N AK L  EMV + V PN+V+  ++++ LC NG+ + A  + + +
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +  +   YN ++ G C   K++   +LF S+   G K    +YNI+I G CK   +
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ ++   G  P   TYN L         A +++KL  E++    + D  T +  
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 374 IDGL 377
           ID L
Sbjct: 718 IDML 721



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 12/274 (4%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC---KE 170
           P VI ++ L + + +T    + L L K+M       G+    N  T SI+I+  C   K 
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELK----GIAH--NLYTLSIMINCFCRCRKL 237

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
                A    +++ YE   PN +T+++LI+G C     +EA  L+  MV+ G +P++++ 
Sbjct: 238 CLAFSAMGKIIKLGYE---PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 294

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++N LC +GK   A  L+D MV+   +PNA TY  +++  C +G+     EL   ME 
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
              K D   Y+I+I+G CK+  ++ A +L+NE+  KGI   ++TYN L  G     + + 
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             KL  +M    +  +  T+   ID      ++R
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 104/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D A +LF  M +    P V+ ++ L         ++    L  +M  +G+  N+ + ++
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  K+  A   +  +++    PN  T++TL++G CL G+++   EL   M  MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K D  + N L+NG C + +  EA+ L +++   G +P  VTY  + + + +  Q   A+
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L  +M+  ++  D   Y   IDGLC
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLC 372



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++ ILL  L  N   +  L +F+++    +  D+  Y+I+I+  C   +V   + 
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 627

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P V T+  +I GLC +  + EA  LF K++  G  P+  TYN LI    
Sbjct: 628 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 687

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
             G    ++ L +E+          F  +  T  ++ID L  +
Sbjct: 688 GDGDATKSVKLIEELKRCG------FSVDASTIKMVIDMLSDD 724



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 65/138 (47%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K D+A  L   M+     P    ++ L      T + + V  L   ME  G  H+ ++ +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I+IN +C+ +++  A S   ++   G +P  +T++TL +GL    +   AL+L   M   
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 362 DVAADTCTYRTFIDGLCV 379
               D  T  T ++GLC+
Sbjct: 286 GHKPDLITINTLVNGLCL 303


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  280 bits (717), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 147/381 (38%), Positives = 228/381 (59%), Gaps = 7/381 (1%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H +P PP   FN +L  L K KH+ T LSL +++   G+  D +T++ILINCF ++G  
Sbjct: 53  LHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLN 112

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           SL F IF +IL+  + P  +TF +LIKGLC +  I +A     K+ A G   + ++Y TL
Sbjct: 113 SLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTL 172

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G    AL L K +       G + +PN V Y++IID +CK   V+ A +L+ Q
Sbjct: 173 INGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + P+V TY +LI GF   +  N A  L  +M  + + PNV + N++++  CK GK
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +++A  +L +M++ D++P+  TYN+LMDG+C   K+N+ K++F SM S G   +   Y  
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           ++NG+CK K V+EA++L+ E+  + I P VVTY++L  GL ++ +   ALKL  EM    
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
              +  TY + +D LC    V
Sbjct: 407 QPPNIVTYSSILDALCKNHHV 427



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 188/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+++  + K K  +    L+ ++ +  + PD++TY+ LI+ F  + +++    +
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PNV TF  L+ G C E ++ +A  +   +     +P+V+TYN+L++G C 
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +G    GV+   N   Y+ +++G CK   VD+A  LF +M+   +
Sbjct: 319 INKVNKAKDIFDSMASG----GVI--ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY+SLI G C       A  L+ EM D+G  PN+V+ + I++ LCKN  +D A  
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +RP+ +TY  L+ G C +G++   + +F  +   G   D ++Y ++I G+C
Sbjct: 433 LLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFC 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                ++AL+L +++   G  P   TY  +   LFE  + + A KL  EM
Sbjct: 493 DKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L KR++   + P+   Y+++I+  CK   V+  F ++ ++
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 227

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P+V T+ +LI G  A S++  A  LF K+K     PNV T+N L++G C+ G  
Sbjct: 228 VAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKV 287

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +   M   +       KP+ VTY+ ++DG C    V+KAK++F  M    +  NV
Sbjct: 288 NDAKVVLAIMMKDD------IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             YT++++GFC     +EA  L  EM  + + PNVV+ + +++ LCK G++  A +L+D 
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M      PN  TY++++D  C    +++   L  +++  G + D ++Y ILI G C++  
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A +++ +L  KG    V  Y  +  G  +    ++AL L  +M+ N    +  TY  
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521

Query: 373 FIDGL 377
            I  L
Sbjct: 522 VILSL 526



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 174/320 (54%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+   +     +  + LF ++    + P++YT++IL++ FCK G+V+   V+
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVT+ SL+ G C+ +++ +A  +F  + + G   NV  Y T++NG C+
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+NLF+EM            PN VTYS +IDGLCK G +  A +L  +M     
Sbjct: 354 IKMVDEAINLFEEMRCRK------IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ 407

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTY+S++   C  +  ++A  LL  + DQG++P++ +  +++  LC++G++++A  
Sbjct: 408 PPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQN 467

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + ++      + + Y  ++ GFC  G  ++   L   ME  GC  +  +Y ++I    
Sbjct: 468 VFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLF 527

Query: 309 KNKEVEEALSLYNELPFKGI 328
           +  E + A  L  E+  +G+
Sbjct: 528 EKDENDTAEKLLREMIVRGL 547



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + +++ +L  L KN H D  ++L   L   G+ PD+YTY+ILI   C+ G++
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRL 462

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   +  +V  +T +I+G C +    +A AL +K++  GC PN  TY  +
Sbjct: 463 EDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELV 522

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L +EM
Sbjct: 523 ILSLFEKDENDTAEKLLREM 542



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%)

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           L++  +  P  F +N ++         +    L   ME  G + D F++NILIN + +  
Sbjct: 51  LLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLG 110

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
               + S++ ++  KG  PT +T+NTL  GL       +AL    ++       D  +Y 
Sbjct: 111 LNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYG 170

Query: 372 TFIDGLC 378
           T I+GLC
Sbjct: 171 TLINGLC 177


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 226/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK   +D V+SL +R+ ++ +  DLY+Y+ILINCFC+  Q+ L   +
Sbjct: 78  PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
            G++++  + P++VT +SL+ G C   RI EA AL                         
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197

Query: 104 ----------FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                       ++ A GC+P++ TY T++NGLC+ G   +AL+L K+M  G  E  VV 
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IID LC    V+ A  LF +M  + + PNVVTY SLI   C+   W++A  
Sbjct: 258 ------YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ + +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +YN LI G+CK K VEE + L+ E+  +G+    V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  GLF+    + A K+F +M  + V  D  TY   +DGLC
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 191/396 (48%), Gaps = 31/396 (7%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +FN L+ G    NK  + V +L  R+ + G  PDL+TY  ++N  CK G + L   
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++ +     +VV +T++I  LC    + +A  LFT++   G  PNV+TYN+LI  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTV 158
             G    A  L  +M        VV                               P+  
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TYS +I+G C    +D+AK +F  M  ++  PNVVTY +LI GFC A    E   L  EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G+  N V+ N ++  L + G  D A ++   MV   V P+  TY+ L+DG C  GK+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +   +F  ++    + D ++YNI+I G CK  +VE+   L+  L  KG+KP V+ Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             G       E A  LF EM+ +    ++ TY T I
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  ++  L   K+ +  L+LF  +++ G+ P++ TY+ LI C C  G+ S    +   ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF++LI     E ++VEA  L+ ++     +P++ TY++LING C      
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A ++F+ M + +      F PN VTY+ +I G CK   V++  ELF +M    L  N V
Sbjct: 378 EAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G   A D + A+ +  +MV  GV P++++ +++++ LCK GK++ A  + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+ +TYN +++G C  GK+    +LF S+   G K +   Y  +I+G+C+    
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA +L+ E+   G  P   TYNTL            + +L  EM+      D  T    
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 374 IDGL 377
           I+ L
Sbjct: 612 INML 615



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 10/340 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+ CL     +     L   +    + P++ T+S LI+ F K G++     +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++    P++ T++SLI G C   R+ EA  +F  + +  C PNV+TYNTLI G C+
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF+EM+   G +G     NTVTY+ +I GL + G  D A+++F +M  + +
Sbjct: 408 AKRVEEGMELFREMSQ-RGLVG-----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY+ L+ G C      +A  +   +    ++P++ + N+++  +CK GK+++   
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    V+PN   Y T++ GFC  G       LF  M+  G   +  +YN LI    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 309 KNKEVEEALSLYNELP---FKGIKPTV-VTYNTLFHGLFE 344
           ++ +   +  L  E+    F G   T+ +  N L  G  E
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLE 621



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +   ++     +L  +++      ++ +YN LIN  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + ++P+ VT S +++G C    + +A  L  QM    
Sbjct: 127 RRSQLPLALAVLGKM------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VT+ +LIHG    N  +EA  L+  MV +G QP++ +   ++N LCK G +D A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  +  +   Y T++D  C    +N    LF  M++ G + +  +YN LI   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L +++  + I P VVT++ L     +  +   A KL+ EM    +  D 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + I+G C+  ++
Sbjct: 361 FTYSSLINGFCMHDRL 376



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 6/169 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L K    +  L +F+ L    + PD+YTY+I+I   CK G+V  G+ 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNV+ +T++I G C +    EA ALF ++K  G  PN  TYNTLI    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
           R G    +  L KEM +     G V   +T++  I  + DG  ++ +++
Sbjct: 582 RDGDKAASAELIKEMRS----CGFVGDASTISMVINMLHDGRLEKSYLE 626



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A +LF +M      P++V +  L+      N ++    L   M +  +  ++ S N+
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A  +L  M++    P+  T ++L++G+C   +I+    L   M  M 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  ++N LI+G   + +  EA++L + +  +G +P + TY T+ +GL +    + AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   + AD   Y T ID LC
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALC 266



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 35/177 (19%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K+D+A  L   MVQ    P+   +N L+       K + V  L   M+++   +D +SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 302 ILI-----------------------------------NGYCKNKEVEEALSLYNELPFK 326
           ILI                                   NGYC  K + EA++L +++   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +P  VT+NTL HGLF   +A  A+ L   M       D  TY T ++GLC R  +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 226/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK   +D V+SL +R+ ++ +  DLY+Y+ILINCFC+  Q+ L   +
Sbjct: 62  PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
            G++++  + P++VT +SL+ G C   RI EA AL                         
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181

Query: 104 ----------FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                       ++ A GC+P++ TY T++NGLC+ G   +AL+L K+M  G  E  VV 
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IID LC    V+ A  LF +M  + + PNVVTY SLI   C+   W++A  
Sbjct: 242 ------YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ + +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +YN LI G+CK K VEE + L+ E+  +G+    V
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  GLF+    + A K+F +M  + V  D  TY   +DGLC
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 460



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 191/396 (48%), Gaps = 31/396 (7%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +FN L+ G    NK  + V +L  R+ + G  PDL+TY  ++N  CK G + L   
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++ +     +VV +T++I  LC    + +A  LFT++   G  PNV+TYN+LI  LC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTV 158
             G    A  L  +M        VV                               P+  
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TYS +I+G C    +D+AK +F  M  ++  PNVVTY +LI GFC A    E   L  EM
Sbjct: 346 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 405

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G+  N V+ N ++  L + G  D A ++   MV   V P+  TY+ L+DG C  GK+
Sbjct: 406 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 465

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +   +F  ++    + D ++YNI+I G CK  +VE+   L+  L  KG+KP V+ Y T+
Sbjct: 466 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 525

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             G       E A  LF EM+ +    ++ TY T I
Sbjct: 526 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  ++  L   K+ +  L+LF  +++ G+ P++ TY+ LI C C  G+ S    +   ++
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF++LI     E ++VEA  L+ ++     +P++ TY++LING C      
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A ++F+ M + +      F PN VTY+ +I G CK   V++  ELF +M    L  N V
Sbjct: 362 EAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G   A D + A+ +  +MV  GV P++++ +++++ LCK GK++ A  + + +
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+ +TYN +++G C  GK+    +LF S+   G K +   Y  +I+G+C+    
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA +L+ E+   G  P   TYNTL            + +L  EM+      D  T    
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595

Query: 374 IDGL 377
           I+ L
Sbjct: 596 INML 599



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 10/340 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+ CL     +     L   +    + P++ T+S LI+ F K G++     +
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++    P++ T++SLI G C   R+ EA  +F  + +  C PNV+TYNTLI G C+
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF+EM+   G +G     NTVTY+ +I GL + G  D A+++F +M  + +
Sbjct: 392 AKRVEEGMELFREMSQ-RGLVG-----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY+ L+ G C      +A  +   +    ++P++ + N+++  +CK GK+++   
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    V+PN   Y T++ GFC  G       LF  M+  G   +  +YN LI    
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565

Query: 309 KNKEVEEALSLYNELP---FKGIKPTV-VTYNTLFHGLFE 344
           ++ +   +  L  E+    F G   T+ +  N L  G  E
Sbjct: 566 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLE 605



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +   ++     +L  +++      ++ +YN LIN  C
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + ++P+ VT S +++G C    + +A  L  QM    
Sbjct: 111 RRSQLPLALAVLGKM------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VT+ +LIHG    N  +EA  L+  MV +G QP++ +   ++N LCK G +D A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  +  +   Y T++D  C    +N    LF  M++ G + +  +YN LI   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L +++  + I P VVT++ L     +  +   A KL+ EM    +  D 
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + I+G C+  ++
Sbjct: 345 FTYSSLINGFCMHDRL 360



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 6/169 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L K    +  L +F+ L    + PD+YTY+I+I   CK G+V  G+ 
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNV+ +T++I G C +    EA ALF ++K  G  PN  TYNTLI    
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
           R G    +  L KEM +     G V   +T++  I  + DG  ++ +++
Sbjct: 566 RDGDKAASAELIKEMRS----CGFVGDASTISMVINMLHDGRLEKSYLE 610



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A +LF +M      P++V +  L+      N ++    L   M +  +  ++ S N+
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A  +L  M++    P+  T ++L++G+C   +I+    L   M  M 
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  ++N LI+G   + +  EA++L + +  +G +P + TY T+ +GL +    + AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   + AD   Y T ID LC
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALC 250



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 35/177 (19%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K+D+A  L   MVQ    P+   +N L+       K + V  L   M+++   +D +SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 302 ILI-----------------------------------NGYCKNKEVEEALSLYNELPFK 326
           ILI                                   NGYC  K + EA++L +++   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +P  VT+NTL HGLF   +A  A+ L   M       D  TY T ++GLC R  +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 232/422 (54%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK   ++ V+SL +++ ++G+  DLYTYSI INCFC+  Q+SL   +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
             ++++  + P++VT +SL+ G C   RI                               
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+P+++TY T++NGLC+ G   +AL+L K+M  G  E  VV 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IIDGLCK   +D A  LF +M  + + P+V TY+SLI   C+   W++A  
Sbjct: 261 ------YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ + +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +Y+ LI G+CK K VEE + L+ E+  +G+    V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYA 388
           TY TL HG F+ R  + A  +F +M    V  +  TY   +DGLC      +  V F Y 
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 389 RR 390
           +R
Sbjct: 495 QR 496



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 6/356 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L K KH D  L+LF  +++ G+ PD++TYS LI+C C  G+ S    +   ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF++LI     E ++VEA  L+ ++     +P++ TY++LING C      
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A ++F+ M + +      F PN VTYS +I G CK   V++  ELF +M    L  N V
Sbjct: 381 EAKHMFELMISKD-----CF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LIHGF  A D + A+ +  +MV  GV PN+++ N++++ LCKNGK+  A  + + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+ +TYN +++G C  GK+    ELF ++   G   +  +YN +I+G+C+    
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           EEA SL  ++   G  P   TYNTL          E + +L  EM+    A D  T
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++  L K    D  LSL K++    +  D+  Y+ +I+  CK   +     +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V T++SLI  LC   R  +A+ L + +      PNV+T++ LI+   +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L+ EM      I     P+  TYS +I+G C    +D+AK +F  M  ++ 
Sbjct: 341 EGKLVEAEKLYDEM------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY++LI GFC A    E   L  EM  +G+  N V+   +++   +    DNA  
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V PN  TYN L+DG C  GK+ +   +F  ++    + D ++YNI+I G C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +VE+   L+  L  KG+ P V+ YNT+  G       E A  L  +M+ +    ++ 
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574

Query: 369 TYRTFI 374
           TY T I
Sbjct: 575 TYNTLI 580



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 20/376 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V SF  L G     + + +    ++               IL N    + +V     
Sbjct: 24  PPTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDAVD 69

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +   ++     +L  +++  G   ++ TY+  IN  C
Sbjct: 70  LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + ++P+ VT S +++G C    +  A  L  QM    
Sbjct: 130 RRSQLSLALAVLAKM------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+  T+T+LIHG    N  +EA  L+ +MV +G QP++V+   ++N LCK G +D A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  +  +   YNT++DG C    ++    LF  M++ G + D F+Y+ LI+  
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L +++  + I P VVT++ L     +  +   A KL+ EM    +  D 
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + I+G C+  ++
Sbjct: 364 FTYSSLINGFCMHDRL 379



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 9/245 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K K  +  + LF+ ++  GL  +  TY+ LI+ F +        ++
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN++T+  L+ GLC   ++ +A  +F  L+    EP++ TYN +I G+C+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       LF  ++      GV   PN + Y+ +I G C++G  ++A  L  +MK +  
Sbjct: 516 AGKVEDGWELFCNLSLK----GV--SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY +LI       D   +  L+ EM   G   +  +  ++ N L  +G++D +  
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 626

Query: 249 LLDLM 253
            LD++
Sbjct: 627 FLDML 631



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 51/245 (20%)

Query: 176 AKELFLQMKYENLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           AK LF+    + +   P V ++ +L    C    +  A G   E              ++
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
            N L    K+D+A  L   MV+    P+   +N L+       K   V  L   M+++G 
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 294 KHDDFSYNI-----------------------------------LINGYCKNKEVEEALS 318
            HD ++Y+I                                   L+NGYC +K + +A++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L +++   G KP   T+ TL HGLF   +A  A+ L  +M       D  TY T ++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 379 VRPQV 383
            R  +
Sbjct: 235 KRGDI 239



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%)

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           IL N      +V++A+ L+ ++      P++V +N L   + ++ + E  + L  +MQ  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 362 DVAADTCTYRTFIDGLCVRPQVRFTYA 388
            ++ D  TY  FI+  C R Q+    A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALA 139


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 234/422 (55%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK   +D V+SL +++ ++G+  + YTYSILINCFC+  Q+ L   +
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
            G++++  + PN+VT +SL+ G C   RI                               
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A  L  +M  G  E GV+ 
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 Y+ IIDGLCK   +D A  LF +M+ + + PNVVTY+SLI   C+   W++A  
Sbjct: 259 ------YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + P+V + + +++   K GK+  A +L D MV+  + P+  TY++L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K++F  M S  C  D  SY+ LI G+CK K V+E + L+ E+  +G+    V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
           TY TL  GLF+    + A ++F EM  + V  +  TY T +DGLC      +  V F Y 
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492

Query: 389 RR 390
           +R
Sbjct: 493 QR 494



 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 196/361 (54%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L KNKH D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V TF++LI     E ++VEA  L+ ++     +P+++TY++LING C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M + +      F P+ V+YS +I G CK   VD+  ELF +M    L
Sbjct: 374 HDRLDEAKQMFEFMVSKH-----CF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTYT+LI G   A D + A+ +  EMV  GV PN+++ N +++ LCKNGK++ A  
Sbjct: 428 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +  + P  +TYN +++G C  GK+    +LF ++   G K D  +YN +I+G+C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    EEA +L+ E+   G  P    YNTL          E + +L  EM+    A D  
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607

Query: 369 T 369
           T
Sbjct: 608 T 608



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 200/401 (49%), Gaps = 41/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L  +      ++L  R+ + G  PDL TY +++N  CK G   L F++
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFIL 243

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    P V+ +T++I GLC    + +A  LF +++  G  PNV+TY++LI+ LC 
Sbjct: 244 LNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  +M      I     P+  T+S +ID   KEG + +A++L+ +M   ++
Sbjct: 304 YGRWSDASRLLSDM------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++VTY+SLI+GFC  +  +EAK +   MV +   P+VVS + ++   CK  ++D    
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417

Query: 249 LLDLMVQ----------------------CD-------------VRPNAFTYNTLMDGFC 273
           L   M Q                      CD             V PN  TYNTL+DG C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+ +   +F  ++    +   ++YNI+I G CK  +VE+   L+  L  KG+KP VV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            YNT+  G       E A  LF EM+ +    ++  Y T I
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 173/375 (46%), Gaps = 64/375 (17%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +FG +++S   P+++ F+ L+  +   ++     +L  +++  G   N  TY+ LIN  
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCF 126

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNT 157
           CR     +AL +  +M     E  +V                             ++PNT
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186

Query: 158 -----------------------------------VTYSIIIDGLCKEGFVDKAKELFLQ 182
                                              VTY ++++GLCK G  D A  L  +
Sbjct: 187 VTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNK 246

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   L P V+ YT++I G C     ++A  L  EM  +G++PNVV+ + +++ LC  G+
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
             +ASRLL  M++  + P+ FT++ L+D F   GK+   ++L+  M          +Y+ 
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LING+C +  ++EA  ++  +  K   P VV+Y+TL  G  + ++ +  ++LF EM    
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 363 VAADTCTYRTFIDGL 377
           +  +T TY T I GL
Sbjct: 427 LVGNTVTYTTLIQGL 441



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 9/245 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K K  D  + LF+ ++  GL  +  TY+ LI    + G   +   I
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN++T+ +L+ GLC   ++ +A  +F  L+    EP + TYN +I G+C+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +LF  ++      GV  KP+ V Y+ +I G C++G  ++A  LF +MK +  
Sbjct: 514 AGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN   Y +LI       D   +  L+ EM   G   +  +  ++ N L  +G++D +  
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 624

Query: 249 LLDLM 253
            LD++
Sbjct: 625 FLDML 629



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 2/167 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N LL  L KN   +  + +F+ L    + P +YTY+I+I   CK G+V  G+ 
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VV + ++I G C +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           R G    +  L KEM +  G  G       VT +++ DG   + F+D
Sbjct: 583 RDGDREASAELIKEMRSC-GFAGDASTIGLVT-NMLHDGRLDKSFLD 627



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 89/179 (49%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A  L  EMV     P+++  + +++ + K  K D    L + M    +  N +TY+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++ FC   ++     +   M  +G + +  + + L+NGYC +K + EA++L +++   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +P  VT+NTL HGLF   +A  A+ L   M       D  TY   ++GLC R      +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 104/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  + ++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A  +L  M++    PN  T ++L++G+C + +I+    L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  ++N LI+G   + +  EA++L + +  KG +P +VTY  + +GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   +      Y T IDGLC
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLC 267


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 135/385 (35%), Positives = 233/385 (60%), Gaps = 7/385 (1%)

Query: 4   MHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H +P   +  FN +LG L K+KHY TVLSL +++   G+ P+  T++ILINCFC++G +
Sbjct: 60  LHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLI 119

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +  +IL+  + P+++T  + IKG C + +I +A     KL A G   + ++Y TL
Sbjct: 120 PFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTL 179

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G T  AL L + +       G + + N V Y+ +IDG+ K+  V+ A +L+ +
Sbjct: 180 INGLCKVGETRAALQLLRRVD------GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSE 233

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P+VVTY++LI GF       +A  L  +M+ + ++P+V + N++++  CK G+
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 293

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +LD+M+  D++PN  T+NTL+DGFC   K+   K +F  M   G K +  +Y  
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 353

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L++GYC  K+V +A  ++N +  +G+   V +YN + +G  +I++ ++A+KLF+EM    
Sbjct: 354 LMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH 413

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTY 387
           +  D  TY + IDGLC   ++ + +
Sbjct: 414 IIPDVVTYNSLIDGLCKSGKISYAF 438



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 29/337 (8%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L +R++   +  +   Y+ +I+   K   V+  F ++  +
Sbjct: 175 SYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEM 234

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVT+++LI+G     ++ +A  LF K+     +P+V T+N L++G C+ G  
Sbjct: 235 VAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRL 294

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N+   M   +       KPN  T++ ++DG CK+  + + K +F  M  + + PNV
Sbjct: 295 KKAKNVLDMMMIQD------IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY SL+ G+C     N+AK +   M  +GV  NV S N+++N  CK  K+D A +L   
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN----------- 301
           M    + P+  TYN+L+DG C +GKI+   +L   M   G   +  +YN           
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLK 468

Query: 302 ------------ILINGYCKNKEVEEALSLYNELPFK 326
                       ILI G C++ ++E A  ++ +L  K
Sbjct: 469 DQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 151/279 (54%), Gaps = 19/279 (6%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  V+   ++ G     K  D +  LF ++    + PD+YT++IL++ FCK G++    
Sbjct: 240 SPDVVTYSALIRGFFIVGKLKDAI-DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV TF +L+ G C + ++ E   +F  +   G +PNV+TY +L++G 
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C       A  +F  M+    + GV    N  +Y+I+I+G CK   VDKA +LF++M ++
Sbjct: 359 CLVKQVNKAKKIFNTMS----QRGVT--ANVHSYNIMINGFCKIKKVDKAMKLFIEMHHK 412

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           ++ P+VVTY SLI G C +   + A  L+ EM D+G  PN+++ N I+N L         
Sbjct: 413 HIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL-------- 464

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++L D  +Q    PN  T   L+ G C +GK+   +++F
Sbjct: 465 TKLKDQGIQ----PNMHTDTILIKGLCQSGKLEAARKVF 499



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           ++ + N + YS I         VD A  LF  + ++N       +  ++     +  ++ 
Sbjct: 28  ILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT 86

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
              L  +M  +G+ PN V+ N+++N  C+ G +  A  +L  +++    P+  T NT + 
Sbjct: 87  VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC---------------------- 308
           GFCL G+I++       + ++G   D  SY  LING C                      
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 309 -------------KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
                        K+K V +A  LY+E+  K I P VVTY+ L  G F + + + A+ LF
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +M   ++  D  T+   +DG C   +++
Sbjct: 267 NKMILENIKPDVYTFNILVDGFCKEGRLK 295



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 12/132 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NI++    K K  D  + LF  ++   + PD+ TY+ LI+  CK G++S  F +  
Sbjct: 383 VHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVN 442

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN++T+ S++             AL TKLK  G +PN+ T   LI GLC++G
Sbjct: 443 EMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQPNMHTDTILIKGLCQSG 490

Query: 131 HTIVALNLFKEM 142
               A  +F+++
Sbjct: 491 KLEAARKVFEDL 502


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 232/422 (54%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK   +D V+SL +++ ++G+  +LYTYSILINCFC+  Q+SL   +
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
             ++++  + P++VT  SL+ G C  +RI                               
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+P+++TY  ++NGLC+ G   +AL+L K+M  G  E     
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE----- 253

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P  V Y+ IID LC    V+ A  LF +M  + + PNVVTY SLI   C+   W++A  
Sbjct: 254 -PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ + +++   K GK+  A +L D M++  + P+ FTY++L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K +F  M S  C  +  +YN LI G+CK K V+E + L+ E+  +G+    V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
           TY TL HG F+ R+ + A  +F +M  + V  D  TY   +DGLC   +V      F Y 
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492

Query: 389 RR 390
           +R
Sbjct: 493 QR 494



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L   K+ +  L+LF  +++ G+ P++ TY+ LI C C  G+ S    +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVTF++LI     E ++VEA  L+ ++     +P++ TY++LING C 
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F+ M + +      F PN VTY+ +I G CK   VD+  ELF +M    L
Sbjct: 374 HDRLDEAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTYT+LIHGF  A + + A+ +  +MV  GV P++++ +++++ LC NGK++ A  
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +  + P+ +TYN +++G C  GK+    +LF S+   G K +  +Y  +++G+C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    EEA +L+ E+  +G  P   TYNTL            + +L  EM+      D  
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607

Query: 369 T 369
           T
Sbjct: 608 T 608



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 195/401 (48%), Gaps = 41/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L ++      ++L  R+   G  PDL TY I++N  CK G + L   +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    P VV + ++I  LC    + +A  LFT++   G  PNV+TYN+LI  LC 
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  +M      I     PN VT+S +ID   KEG + +A++L+ +M   ++
Sbjct: 304 YGRWSDASRLLSDM------IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY+SLI+GFC  +  +EAK +   M+ +   PNVV+ N ++   CK  ++D    
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 249 LLDLMVQ----------------------CD-------------VRPNAFTYNTLMDGFC 273
           L   M Q                      CD             V P+  TY+ L+DG C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+     +F  ++    + D ++YNI+I G CK  +VE+   L+  L  KG+KP VV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           TY T+  G       E A  LF EM+      D+ TY T I
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 144/282 (51%), Gaps = 6/282 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           ++ +A  LF  +      P+++ ++ L++ + +     + ++L ++M N    +G+    
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N  TYSI+I+  C+   +  A  +  +M      P++VT  SL++GFCH N  ++A  L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +MV+ G QP+  + N +++ L ++ +   A  L+D MV    +P+  TY  +++G C  
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G I+    L   ME    +     YN +I+  C  K V +AL+L+ E+  KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           N+L   L    +   A +L  +M    +  +  T+   ID  
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 6/244 (2%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A+NLF +M            P+ V +S ++  + K    D    L  QM+   ++ N+ T
Sbjct: 65  AVNLFGDMVKSRP------FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y+ LI+ FC  +  + A  +L +M+  G +P++V+ N ++N  C   ++ +A  L+  MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +   +P++FT+NTL+ G     + +    L   M   GC+ D  +Y I++NG CK  +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            ALSL  ++    I+P VV YNT+   L   +    AL LF EM    +  +  TY + I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 375 DGLC 378
             LC
Sbjct: 299 RCLC 302



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 105/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF  M      P++V ++ L+      N ++    L  +M + G+  N+ + ++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A  +L  M++    P+  T N+L++GFC   +I+    L   M  MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D F++N LI+G  ++    EA++L + +  KG +P +VTY  + +GL +    + AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   +      Y T ID LC
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALC 267



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 86/175 (49%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A  L  +MV     P++V  + +++ + K  K D    L + M    +  N +TY+ L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++ FC   +++    +   M  +G + D  + N L+NG+C    + +A+SL  ++   G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +P   T+NTL HGLF   +A  A+ L   M       D  TY   ++GLC R  +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  277 bits (708), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 145/378 (38%), Positives = 214/378 (56%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   HP PPP+  F+ LLG + +  HY T +SLF +L+S G+ P + T +ILINC+C   
Sbjct: 46  MLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +S  F + G IL+  F PN+VTF +LI G C    + +A A    L A G   +  +Y 
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYG 164

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LINGLC+ G T  AL L ++M         + +PN +TYS +IDGLCK+  +  A  LF
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEED------LVRPNLITYSTVIDGLCKDRLIADALRLF 218

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +    +  +VV Y SLIHG C    W EA  LL  MV   + P+  + N++++ LCK 
Sbjct: 219 SLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKE 278

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G++  A  +  +M++   +P+  TYN LM+GFCL+  ++  +ELF  M   G + D  +Y
Sbjct: 279 GRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNY 338

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N+LINGYCK   V+EA+ L+ E+  K + P + TYN+L  GL ++ +     +L  EM  
Sbjct: 339 NVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398

Query: 361 NDVAADTCTYRTFIDGLC 378
              + D  TY  F+D  C
Sbjct: 399 RGQSPDIVTYNIFLDAFC 416



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 185/350 (52%), Gaps = 7/350 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ ++  L K++     L LF  + S G+  D+  Y+ LI+  C +GQ      +
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P+  TF  L+  LC E RIVEA  +F  +   G +P+++TYN L+ G C 
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           + +   A  LF  M     E      P+ + Y+++I+G CK   VD+A  LF +++ +NL
Sbjct: 313 SNNVSEARELFNRMVKRGLE------PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY SLI G C     +  + L+ EM D+G  P++V+ N+ ++  CK+   + A  
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +VQ  + P+ + Y+ +++ FC   K+   +E    +   GC  +  +Y I+IN  C
Sbjct: 427 LFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+   +EA++L +++      P  VT+ T+   L E  + ++A KL +EM
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 163/321 (50%), Gaps = 13/321 (4%)

Query: 11  VSSFNILL-GC--LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           V ++N L+ GC  + + +    +L++  R N   + PD YT++IL++  CK G++     
Sbjct: 230 VVAYNSLIHGCCSVGQWREATRLLTMMVRGN---INPDDYTFNILVDALCKEGRIVEAQG 286

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +++    P++VT+ +L++G C  + + EA  LF ++   G EP+V+ YN LING C
Sbjct: 287 VFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYC 346

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A+ LFKE+   N        PN  TY+ +IDGLCK G +   +EL  +M    
Sbjct: 347 KIDMVDEAMVLFKEIRCKN------LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P++VTY   +  FC +  + +A  L  ++V QG+ P+    +VI+   CK  K+  A 
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAE 459

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  ++     PN  TY  +++  C     +    L   M+   C  D  ++  +I   
Sbjct: 460 EALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL 519

Query: 308 CKNKEVEEALSLYNELPFKGI 328
            +  E ++A  L  E+  +G+
Sbjct: 520 QERNETDKAEKLRLEMIERGL 540



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 7/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FNIL+  L K         +F  +   G  PD+ TY+ L+  FC    VS    +
Sbjct: 263 PDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAREL 322

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++    P+V+ +  LI G C    + EA  LF +++     PN+ TYN+LI+GLC+
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM +  G+      P+ VTY+I +D  CK    +KA  LF Q+  + +
Sbjct: 383 LGRMSCVQELVDEMCD-RGQ-----SPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGI 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  ++  FC       A+  L  ++  G  PNV +  +++N LCK+   D A  
Sbjct: 436 WPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMT 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           LL  M   D  P+A T+ T++       + ++ ++L + M   G  +D+
Sbjct: 496 LLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 106/212 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           VD     F +M  ++  P +  +  L+        +  A  L  ++  +G+ P++ +  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C    +  A  LL  +++   +PN  T+NTL++GFC+ G +++     + + + G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D+FSY  LING CKN +  +AL L  ++    ++P ++TY+T+  GL + R    AL
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +LF  +    +  D   Y + I G C   Q R
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWR 247


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  276 bits (707), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 224/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK K +D V+S  +++  +G+  +LYTY+I+INC C+  Q+S    I
Sbjct: 63  PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------- 111
            G++++  + P++VT  SL+ G C  +RI EA AL  ++   G                 
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182

Query: 112 ------------------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                             C+P+++TY  +INGLC+ G   +ALNL  +M  G  E  VV 
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                 YS +ID LCK   VD A  LF +M  + + P+V TY+SLI   C+   W++A  
Sbjct: 243 ------YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PNVV+ N +++   K GK+  A +L D M+Q  + PN  TYN+L++GFC
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  +++F  M S  C  D  +YN LING+CK K+V + + L+ ++  +G+    V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY TL HG F+    + A  +F +M  + V  +  TY T +DGLC
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 197/364 (54%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ ++  L K +H D  L+LF  +++ G+ PD++TYS LI+C C  G+ S    +   +L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF SLI     E +++EA  LF ++     +PN++TYN+LING C      
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F  M + +        P+ VTY+ +I+G CK   V    ELF  M    L  N V
Sbjct: 363 EAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LIHGF  A+D + A+ +  +MV  GV PN+++ N +++ LCKNGK++ A  + + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+ +TYN + +G C  GK+    +LF S+   G K D  +YN +I+G+CK    
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA +L+ ++   G  P   TYNTL            + +L  EM+    A D  TY   
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596

Query: 374 IDGL 377
            D L
Sbjct: 597 TDML 600



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 46/370 (12%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F+ L+  +    +     +   K++  G   N+ TYN +IN LC
Sbjct: 52  LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R      AL +  +M      + + + P+ VT + +++G C    + +A  L  QM    
Sbjct: 112 RRSQLSFALAILGKM------MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VT+T+L+HG    N  +EA  L+  MV +G QP++V+   ++N LCK G+ D A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY------- 300
            LL+ M +  +  +   Y+T++D  C    ++    LF  M++ G + D F+Y       
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 301 ----------------------------NILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                                       N LI+ + K  ++ EA  L++E+  + I P +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV-----RFTY 387
           VTYN+L +G     + + A ++F  M   D   D  TY T I+G C   +V      F  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 388 ARRKGNSGNT 397
             R+G  GNT
Sbjct: 406 MSRRGLVGNT 415



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 7/168 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L KN   +  + +F+ L    + PD+YTY+I+    CK G+V  G+ +
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V+ + ++I G C +    EA  LF K+K  G  P+  TYNTLI    R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            G    +  L KEM +        F  +  TY ++ D L  +G +DK 
Sbjct: 568 DGDKAASAELIKEMRSCR------FAGDASTYGLVTDML-HDGRLDKG 608



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 35/176 (19%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K+D A  L   MV+    P+   ++ L+       K + V      ME +G  H+ ++YN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 302 ILI-----------------------------------NGYCKNKEVEEALSLYNELPFK 326
           I+I                                   NG+C    + EA++L +++   
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           G +P  VT+ TL HGLF+  +A  A+ L   M       D  TY   I+GLC R +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/383 (38%), Positives = 228/383 (59%), Gaps = 7/383 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP+  F  +LG L K KHY  V+ LF+R+   G+  +  T +ILIN +C + 
Sbjct: 40  MLRMRP-PPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLR 98

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++  F +F +IL+  + P+++T+T+LI+GLC   ++ E+     +L + G + + ++Y 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  AL L +++       G + +P+ V Y+ IIDGLCK+  V  A +L+
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIE------GEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + + PNVVTYTSLI+GFC     ++A GLL EMV + V PNV + N +++ LCK 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GKM  A  L+ +M++  V P+ FTYN LMDG+ L  +  + K +F  M  MG   D  SY
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +++I+G  K K ++EA+ L+  +  + + P VV Y++L  GL +  +   ALK   EM  
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                +  TY + ID LC   QV
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQV 415



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 191/350 (54%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K+K       L+  +    +FP++ TY+ LI  FC +GQ+   F +
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNV TF +L+ GLC E ++ EA +L   +   G  P+V TYN L++G   
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A N+F  M     ++GV    +  +YS++I GL K   +D+A +LF  M+ EN+
Sbjct: 307 VKEAGKAKNVFNIM----AQMGVTC--DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y+SLI G C +   N A   + EM D+G  PNV++   +++ LCK+ ++D A  
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    ++ N +TYN L+DG C  G++   +++F  +   G   D  +Y+I+ING C
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K    +EAL+L +++  KG  P  + Y T+ +  FE    ++A KL  EM
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 140/266 (52%), Gaps = 7/266 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+      K      ++F  +  +G+  D+++YS++I+   KM  +     +
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+VV ++SLI GLC   RI  A     ++   G  PNVITY +LI+ LC+
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A+ L K++ +         + N  TY+I++DGLCK+G +  A+++F  +  +  
Sbjct: 412 SHQVDKAIALLKKIKDQG------IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N +VVTY+ +I+G C  + ++EA  LL +M D+G  P+ ++   I+N   +    D A +
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEK 525

Query: 249 LLDLMVQC-DVRPNAFTYNTLMDGFC 273
           LL  M+ C D + N  T +   +  C
Sbjct: 526 LLREMIDCVDYKDNGDTCDQYDEFIC 551



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 150/344 (43%), Gaps = 64/344 (18%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT--------------- 143
           +A   F ++      P +I +  ++  L +T H  + ++LF+ M                
Sbjct: 32  DAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILI 91

Query: 144 -------NGNGEIGVV-------FKPNTVTYSII-------------------------- 163
                    N    V        ++P+ +TY+ +                          
Sbjct: 92  NSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIK 151

Query: 164 ---------IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                    I+GLCK G    A  L  +++ E   P+VV Y ++I G C      +A  L
Sbjct: 152 LDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDL 211

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             EM ++ V PNVV+   ++   C  G++D A  LL+ MV  +V PN  T+NTL+DG C 
Sbjct: 212 YCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCK 271

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK+   K L   M   G   D F+YN L++GY   KE  +A +++N +   G+   V +
Sbjct: 272 EGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHS 331

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           Y+ +  GL +++  + A+ LF  M+  +V  D   Y + IDGLC
Sbjct: 332 YSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLC 375



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 117/230 (50%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + +  I+  L K         LF +M+   +  N +T   LI+ +CH    N A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +++  G QP++++   ++  LC NG++  +    D +V   ++ +  +Y TL++G C 
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+      L   +E   C+ D   YN +I+G CK+K V +A  LY E+  K + P VVT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           Y +L +G   + Q ++A  L  EM   +V  + CT+ T +DGLC   ++R
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP V ++  L+  L K+   D  ++L K++   G+  ++YTY+IL++  CK G++
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +L      +VVT++ +I GLC ES   EA  L +K++  GC P+ I Y T+
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510

Query: 123 INGLCRTGHTIVALNLFKEMTN 144
           IN          A  L +EM +
Sbjct: 511 INAFFEKDMNDKAEKLLREMID 532



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 1/206 (0%)

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           + L+ ++ ++ PN     S  H F    + N+A      M+     P ++    I+  L 
Sbjct: 2   VILRFRFHSIIPNSTLLLSHTH-FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLV 60

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K         L   M    ++ N  T N L++ +C   +IN    +F  +  +G + D  
Sbjct: 61  KTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDII 120

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI G C N +V+E+L+ ++ L  +GIK   V+Y TL +GL +I Q   AL+L  ++
Sbjct: 121 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G     D   Y T IDGLC    VR
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVR 206


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/383 (38%), Positives = 226/383 (59%), Gaps = 22/383 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  ++P+P  V  F  +L  L K KHY TV+SLF +L   G+ P++ + SILINC+C +G
Sbjct: 62  MLLLNPAPS-VIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLG 120

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F IF +IL+  + PN +T T+L+KG C   ++ EA      + A G   N ++Y 
Sbjct: 121 QMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYG 180

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  AL + +++       G +   + V YS IIDGLCK+  V+ A EL+
Sbjct: 181 TLINGLCKIGETRAALQMLRQIE------GKLVSTDVVMYSTIIDGLCKDKLVNDAYELY 234

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P VVT  SLI+G+C    + EA GLL EMV + + P+V + N++++ LCK 
Sbjct: 235 SEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKE 294

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A   + +M++  V P+  TY++LMDG+CL  ++N+ K +               Y
Sbjct: 295 GKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------Y 339

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +I+ING+CK K V++ALSL+ E+  + I P  VTYN+L  GL +  +   A +L  EM+ 
Sbjct: 340 SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRD 399

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
           +   AD  TY + ID LC    V
Sbjct: 400 SGQPADIITYNSLIDALCKNHHV 422



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 33/371 (8%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           +D VL+L    N +       +Y  LIN  CK+G+      +  +I     + +VV +++
Sbjct: 164 HDHVLALGFHFNQV-------SYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYST 216

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +I GLC +  + +A  L++++      P V+T N+LI G C  G    A  L +EM   N
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   P+  T++I++D LCKEG + +AK     M  E + P+VVTY+SL+ G+C  N
Sbjct: 277 ------INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVN 330

Query: 207 DWNEAKGLL---------IEMVDQG-----------VQPNVVSSNVIMNELCKNGKMDNA 246
           + N+AK +          I+MVD+            + P+ V+ N +++ LCK+G++  A
Sbjct: 331 EVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYA 390

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L+D M       +  TYN+L+D  C    +++   L   ++  G + D ++YNILI+G
Sbjct: 391 WELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDG 450

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +++A  ++ +L  KG   TV TY  + +GL        A  L  +M+ N    D
Sbjct: 451 LCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPD 510

Query: 367 TCTYRTFIDGL 377
             T  T I  L
Sbjct: 511 AVTCETIIRAL 521



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 179/370 (48%), Gaps = 34/370 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L + +++    +  D+  YS +I+  CK   V+  + ++  +
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEM 237

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P VVT  SLI G C   +  EA  L  ++      P+V T+N L++ LC+ G  
Sbjct: 238 ITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK- 296

Query: 133 IVALNLFKEMTNGNGEIGVVFK----PNTVTYS--------------------IIIDGLC 168
                  KE  +G   I V+ K    P+ VTYS                    I+I+G C
Sbjct: 297 ------IKEAKSG---IAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFC 347

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           K   VDKA  LF +M+   + P+ VTY SLI G C +   + A  L+ EM D G   +++
Sbjct: 348 KIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADII 407

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +++ LCKN  +D A  L+  +    ++ + +TYN L+DG C  G++   + +F  +
Sbjct: 408 TYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDL 467

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G     ++Y I+ING C    + EA +L +++   G  P  VT  T+   LFE  + 
Sbjct: 468 LIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKN 527

Query: 349 ERALKLFVEM 358
           ERA KL  EM
Sbjct: 528 ERAEKLLREM 537



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 168/332 (50%), Gaps = 14/332 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ ++  L K+K  +    L+  + +  + P + T + LI  +C +GQ    F +  
Sbjct: 211 VVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLR 270

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+V TF  L+  LC E +I EA +    +   G  P+V+TY++L++G C   
Sbjct: 271 EMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVN 330

Query: 131 HTIVALNLFKEMTNGNGEIGVVFK--------------PNTVTYSIIIDGLCKEGFVDKA 176
               A +++  + NG  +I +V K              P+TVTY+ +IDGLCK G +  A
Sbjct: 331 EVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYA 390

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
            EL  +M+      +++TY SLI   C  +  ++A  L+ ++ DQG+Q ++ + N++++ 
Sbjct: 391 WELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDG 450

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK G++ +A  +   ++        +TY  +++G CL G +N  + L   ME  GC  D
Sbjct: 451 LCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             +   +I    +N + E A  L  E+  +G+
Sbjct: 511 AVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 63/340 (18%)

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSI 162
           F ++      P+VI +  +++ L +  H    ++LF ++  NG        KPN V+ SI
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNG-------IKPNIVSLSI 111

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC---------HANDWNEAKG 213
           +I+  C  G +  A  +F ++     +PN +T T+L+ GFC         H +D   A G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 214 LLIEMVDQG---------------------VQPNVVSSNVIM-----NELCKNGKMDNAS 247
                V  G                     ++  +VS++V+M     + LCK+  +++A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M+   + P   T N+L+ G+C+ G+      L   M       D +++NIL++  
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLF--------------------HGLFEIRQ 347
           CK  +++EA S    +  +G+ P VVTY++L                     +G  +I+ 
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKM 351

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            ++AL LF EM+   +A DT TY + IDGLC   ++ + +
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAW 391



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 74/136 (54%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P  + ++N L+  L KN H D  ++L K++   G+  D+YTY+ILI+  CK G++    
Sbjct: 402 QPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQ 461

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           VIF  +L   +   V T+T +I GLC E  + EA  L +K++  GC P+ +T  T+I  L
Sbjct: 462 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521

Query: 127 CRTGHTIVALNLFKEM 142
                   A  L +EM
Sbjct: 522 FENDKNERAEKLLREM 537



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 6/176 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            P   ++N L+  L K+        L   +   G   D+ TY+ LI+  CK   V     
Sbjct: 368 APDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIA 427

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +I       ++ T+  LI GLC + R+ +A  +F  L   G    V TY  +INGLC
Sbjct: 428 LVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLC 487

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
             G    A  L  +M + NG +     P+ VT   II  L +    ++A++L  +M
Sbjct: 488 LEGLLNEAETLLSKMED-NGCV-----PDAVTCETIIRALFENDKNERAEKLLREM 537


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 145/377 (38%), Positives = 222/377 (58%), Gaps = 8/377 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P P  V  F+ L   +   KHY  V+SLF+ +  +G+       +I+ N +C   
Sbjct: 53  MVRMKPLPS-VIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRH 111

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITY 119
           ++   F +    L++    NVVTF +L+ GL AE+++ +A  LF KL +   CEPN + Y
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            T++NGL + GHT   L+L + M  GN       KP+  TYSI+ID LCK+  +D A  L
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNT------KPDVRTYSIVIDALCKDINLDAAINL 225

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +MK +N+ PN+ TY SLI G C    W + K LL EMV+  + PNV + +++++ LCK
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+++A  ++  M++  V P+  TY+ +MDG+CL G+++R + +F  +   G K + FS
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ILINGYCK K + +A+ L+ E+  KG+KP  VTY+T+ HGL E+ +   A K+F EM 
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405

Query: 360 GNDVAADTCTYRTFIDG 376
                 D C + T + G
Sbjct: 406 RVGPTPDICLHSTLLFG 422



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 197/407 (48%), Gaps = 44/407 (10%)

Query: 8   PPPVSSFNILLGCL-AKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQVSLG 65
           P  V +FN LLG L A+NK  D V+ LFK+L    +  P+   Y  ++N   K G     
Sbjct: 129 PFNVVTFNTLLGGLFAENKVTDAVV-LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKT 187

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   + +    P+V T++ +I  LC +  +  A  L  ++K     PN+ TYN+LI+G
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G       L  EM N N        PN  T+SI+IDGLCKEG V+ A E+   M  
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLN------INPNVHTFSILIDGLCKEGKVEDADEVMRHMIE 301

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P+++TY++++ G+C     + A+ +   + D+G++PN+ S ++++N  CK   +  
Sbjct: 302 KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAK 361

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-----CKHDD--- 297
           A +L   + Q  ++P+  TY+T++ G    G+I   K++F  M  +G     C H     
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF 421

Query: 298 --------------FS-------------YNILINGYCKNKEVEEALSLYNELPFKGIKP 330
                         FS             Y ++ING CKN  V EA +++ +LP  G+ P
Sbjct: 422 GYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            V TYN +  G       +    +  +M+ N   A+  TY   + G 
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 184/377 (48%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V +++I++  L K+ + D  ++L   +    + P+++TY+ LI+  CK+GQ     
Sbjct: 199 TKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVK 258

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PNV TF+ LI GLC E ++ +A  +   +   G EP++ITY+ +++G 
Sbjct: 259 TLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGY 318

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C  G    A  +F  + +         KPN  +YSI+I+G CK+  + KA +LF ++  +
Sbjct: 319 CLRGQVDRARRVFNVLRDKG------IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK 372

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+ VTY++++HG        +AK +  EM+  G  P++   + ++    K G ++ A
Sbjct: 373 GLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEA 432

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   + +     N   Y  +++G C   ++     +F  + S+G   D  +YN++I G
Sbjct: 433 MLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITG 492

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+    +E   +  ++   G     +TYN +  G F   +    +    EM G   + D
Sbjct: 493 FCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFD 552

Query: 367 TCTYRTFIDGLCVRPQV 383
             T    I+ L   P +
Sbjct: 553 ATTTGVLINVLKENPSI 569



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 41/345 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N L+  L K   ++ V +L   + ++ + P+++T+SILI+  CK G+V     
Sbjct: 235 PPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADE 294

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++     P+++T+++++ G C   ++  A  +F  L+  G +PN+ +Y+ LING C
Sbjct: 295 VMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYC 354

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC------------------- 168
           +  +   A+ LF E++          KP+TVTYS I+ GL                    
Sbjct: 355 KKKNLAKAMQLFGEISQKG------LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 169 ----------------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
                           K G V++A  LF +++    + N+  YT +I+G C  +   EA 
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  ++   G+ P+V + NV++   C+ G  D    +L  M       N  TYN +M GF
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             + KI+ +      M   G   D  +  +LIN   +N  + + +
Sbjct: 529 FRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 36/248 (14%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF +M      P+V+ ++ L     +   ++    L  EM   G+  +    N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL------------------------ 268
           + N  C   ++D A  +L + ++  +  N  T+NTL                        
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 269 ------------MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
                       M+G    G   +   L   ME    K D  +Y+I+I+  CK+  ++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++L NE+  K I P + TYN+L  GL ++ Q E+   L  EM   ++  +  T+   IDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 377 LCVRPQVR 384
           LC   +V 
Sbjct: 283 LCKEGKVE 290



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 2/157 (1%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A  L   MV+    P+   ++ L          + V  LF  M  +G    D   NI
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           + N YC    ++ A S+       GI   VVT+NTL  GLF   +   A+ LF ++    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 363 V-AADTCTYRTFIDGLCVRPQVRFTYA-RRKGNSGNT 397
           +   +   Y T ++GL  R     T +  R    GNT
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNT 199


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 223/408 (54%), Gaps = 35/408 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SFN LL  LAK +HY  V SL+K+++  GL+PDL T +ILINC C + +++ G     
Sbjct: 91  IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I+R  + P+VVTFT+LIKGLC E RI+EA  LF +++  GC PNV+TY TLI GLC  G
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210

Query: 131 HTIVALNLFKEMTN--------------------------GNGEIGVVF---------KP 155
           +  +AL   +EM N                          GN E  +           +P
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP 270

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N VT+S++ID LCKEG V KAK+L   M    + PN+ TYTSLI GFC   D N AK L 
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + M  +G +P+V+S N+++N  CK  K++ A +L + M+   + P+  T   L+    L 
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK++  KELF  ++      D     I ++G CKN  + EA+ L+NEL    +K  + T+
Sbjct: 391 GKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETF 450

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L  GL +  + E A +LF ++    +  D   Y + I G C + QV
Sbjct: 451 GCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQV 498



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 187/365 (51%), Gaps = 54/365 (14%)

Query: 57  CKMGQVSL--GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
           CK G +S+      F  ++RS F     +F  L+ GL       +  +L+ ++   G  P
Sbjct: 70  CKTGSISVTQAHQFFDLMMRSIF-----SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 115 NVITYNTLIN-----------------------------------GLCRTGHTIVALNLF 139
           +++T N LIN                                   GLC     I A  LF
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE------NLNPNVV 193
             M     ++G    PN VTY  +I GLC  G ++ A +   +M  +      N  PNV+
Sbjct: 185 MRMQ----KLGCT--PNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVI 238

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y+ +I G C   +W EA  L  EMVDQGVQPNVV+ +V+++ LCK G++  A +LL++M
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +Q  + PN FTY +L+ GFCL G +N  KELFVSM S G + D  SYN+LINGYCK  +V
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA+ L+NE+   G+ P V T   L   LF   + + A +LF  ++   +  D C    F
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 374 IDGLC 378
           +DGLC
Sbjct: 419 LDGLC 423



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 29/340 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++I++  L K  +++  + LF  +   G+ P++ T+S+LI+  CK GQV     +
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN+ T+TSLIKG C    +  A  LF  + + G EP+VI+YN LING C+
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354

Query: 129 TGHTIVALNLFKEM------------------------TNGNGEIGVVFKPNTVTYS--- 161
           T     A+ LF EM                         +   E+  V KP  +      
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414

Query: 162 --IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             I +DGLCK G++ +A +LF +++  N+  ++ T+  LI G C A     A  L  ++ 
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G+QP+ ++ + +++  CK G++D A+ L   M +    P+  TY+ LM GF  + K+ 
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           +V +L   M       DD  Y I+ +  CK+++ +E L L
Sbjct: 535 KVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDL 574



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 168 CKEGF--VDKAKELF-LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           CK G   V +A + F L M+      ++ ++  L+ G      +++   L  +M   G+ 
Sbjct: 70  CKTGSISVTQAHQFFDLMMR------SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLW 123

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P++++ N+++N LC   +++     +  +++    P+  T+ TL+ G C+  +I    +L
Sbjct: 124 PDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL 183

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-----PFK-GIKPTVVTYNTL 338
           F+ M+ +GC  +  +Y  LI G C    +  AL  + E+     P+    +P V++Y+ +
Sbjct: 184 FMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSII 243

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             GL ++   E A+ LF EM    V  +  T+   ID LC   QV
Sbjct: 244 IDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQV 288


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 216/368 (58%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SFNIL+ C          LS F ++  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M     E+  +  PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALNLLRKME----EVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A  L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TY++++DGFC   +++  + +F  M + GC  +  ++N LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+   G+     TYNTL HG + +     AL L  EM  + +  D  T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 DTLLDGLC 476



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            PN +T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHGF    D N A  LL EM+  G+ P++V+ + +++ LC NGK+ +A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +  +M               V+ DV+                               P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL  G  ++     AL +F EM  + V  DT T R  + GL  + +
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 383 VRFTYA 388
           ++   A
Sbjct: 667 LKRAVA 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++  ++  + K     + L+L +++  +  + P++  YS +I+  CK G+ S    
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I G C+  R  +A  L  ++      P+V+TYN LIN   
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L+ EM       G++  PNT+TYS +IDG CK+  +D A+ +F  M  + 
Sbjct: 337 KEGKFFEAEELYDEMLPR----GII--PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PN++T+ +LI G+C A   ++   LL EM + G+  +  + N +++     G ++ A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-----------GCKHD 296
            LL  M+   + P+  T +TL+DG C  GK+    E+F  M+             G + D
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YNILI+G     +  EA  LY E+P +GI P  +TY+++  GL +  + + A ++F 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M     + +  T+ T I+G C   +V
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRV 597



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 183/355 (51%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             LIK  C+ S++  A + F K+   G  P+V+T+ TL++GLC       ALNLF +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TY+++  G  +  + + A  +F  M     + +  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TYS +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN++TF +LI G C   RI +   L  ++   G   +  TYNTLI+G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L +EM +          P+ VT   ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++N L+  FC   K+      F  +  +G   D  ++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 CVR 380
           C +
Sbjct: 230 CKK 232


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 217/378 (57%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP   FN +L  L  NKHY TV+SLFK+  S G  PDL T +IL+NCFC + 
Sbjct: 54  MLLMRP-PPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLT 112

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++  F +   IL+  + PN +T  +LIKGLC    I +A     ++ A G + N ++Y 
Sbjct: 113 HITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYR 172

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+TG T     L +++       G   KP+ V Y+ II  LCK   +  A +L+
Sbjct: 173 TLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNVVTY +L++GFC      EA  LL EM  + + P+V + N +++ L K 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GKM  A  +L +M++  ++P+  TYN+L+DG+    K+   K +F SM   G   +  +Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +I+G CK K V+EA+SL+ E+ +K + P +VTY +L  GL +    ERA+ L  +M+ 
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 361 NDVAADTCTYRTFIDGLC 378
             +  D  +Y   +D LC
Sbjct: 407 QGIQPDVYSYTILLDALC 424



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 207/393 (52%), Gaps = 29/393 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L K         +   +    + PD+ TY+ LI+ +  + +V     +
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +S   PNV T+T++I GLC E  + EA +LF ++K     P+++TY +LI+GLC+
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A+ L K+M     E G+  +P+  +Y+I++D LCK G ++ AKE F ++  +  
Sbjct: 391 NHHLERAIALCKKMK----EQGI--QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGY 444

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + NV TY  +I+G C A+ + EA  L  +M  +G  P+ ++   I+  L +  + D A +
Sbjct: 445 HLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEK 504

Query: 249 LLD-----------------------LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +L                        +M +  ++P+  TY TLMDG+ L  ++   K +F
Sbjct: 505 ILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVF 564

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            SM  MG   +   Y I+I+G CK K V+EA+SL+ E+  K + P +VTY +L   L + 
Sbjct: 565 YSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKN 624

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              ERA+ L  EM+ + +  D  +Y   +DGLC
Sbjct: 625 HHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 191/402 (47%), Gaps = 29/402 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V  +N ++  L KNK       L+  +   G+ P++ TY+ L+  FC MG +  
Sbjct: 197 HSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKE 256

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +      P+V TF +LI  L  E ++  A  +   +     +P+V+TYN+LI+
Sbjct: 257 AFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLID 316

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G         A  +F  M       GV   PN  TY+ +IDGLCKE  VD+A  LF +MK
Sbjct: 317 GYFFLNKVKNAKYVFYSMAQS----GVT--PNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y+N+ P++VTYTSLI G C  +    A  L  +M +QG+QP+V S  ++++ LCK G+++
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           NA      ++      N  TYN +++G C         +L   ME  GC  D  ++  +I
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490

Query: 305 NGYCKNKEVEEALSLYNELPFKG-----------------------IKPTVVTYNTLFHG 341
               +  E ++A  +  E+  +G                       IKP VVTY TL  G
Sbjct: 491 CALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            F + + + A  +F  M    V  +   Y   IDGLC +  V
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTV 592



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 183/367 (49%), Gaps = 17/367 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+  L KN H +  ++L K++   G+ PD+Y+Y+IL++  CK G++      
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L   +  NV T+  +I GLC      EA  L +K++  GC P+ IT+ T+I  L  
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVV----------------FKPNTVTYSIIIDGLCKEG 171
                 A  + +EM   G  E   V                 KP+ VTY  ++DG     
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +  AK +F  M    + PNV  YT +I G C     +EA  L  EM  + + PN+V+  
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +++ LCKN  ++ A  LL  M +  ++P+ ++Y  L+DG C +G++   KE+F  +   
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVK 675

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G   +   Y  +IN  CK    +EAL L  ++  KG  P  VT++ +   LFE  + ++A
Sbjct: 676 GYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKA 735

Query: 352 LKLFVEM 358
            K+  EM
Sbjct: 736 EKILXEM 742



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 180/392 (45%), Gaps = 29/392 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K K  D  +SLF+ +    + PD+ TY+ LI+  CK   +     +
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+V ++T L+  LC   R+  A   F +L   G   NV TYN +INGLC+
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++L  +M  G G +     P+ +T+  II  L ++   DKA+++  +M    L
Sbjct: 461 ADLFGEAMDLKSKM-EGKGCM-----PDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 189 N-----------------------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                                   P+VVTY +L+ G+   N+   AK +   M   GV P
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           NV    ++++ LCK   +D A  L + M   ++ PN  TY +L+D  C    + R   L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M+  G + D +SY IL++G CK+  +E A  ++  L  KG    V  Y  + + L + 
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              + AL L  +M+      D  T+   I  L
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWAL 726



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P++ + N++MN  C    +  A  +L  +++    PNA T NTL+ G C  G+I + 
Sbjct: 93  GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA 152

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                 + + G + +  SY  LING CK  E +    L  +L    +KP VV YNT+ H 
Sbjct: 153 LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHS 212

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           L + +    A  L+ EM    ++ +  TY   + G C+   ++  ++
Sbjct: 213 LCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%)

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+     P  F +N ++           V  LF   ES G   D  + NIL+N +C  
Sbjct: 52  DRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHL 111

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +  A S+   +  +G  P  +T NTL  GL    + ++AL    ++       +  +Y
Sbjct: 112 THITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSY 171

Query: 371 RTFIDGLC 378
           RT I+GLC
Sbjct: 172 RTLINGLC 179



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 47/107 (43%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V S+ ILL  L K+   +    +F+RL   G   ++  Y+ +IN  CK G    
Sbjct: 640 HGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDE 699

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
              +  ++      P+ VTF  +I  L  +    +A  +  ++ A G
Sbjct: 700 ALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 220/405 (54%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L G LA+ K YD VL+L K++   G+  DLYT +I+INCFC+  ++   F  
Sbjct: 88  PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
            G+I +  + PN VTF +L+ GLC E R+ EA  L                         
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 104 ----------FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                       ++ A GC+PN  TY  ++N +C++G+T  AL+L ++M +         
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK------I 261

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KP+ VTY+IIID LCK+G +D A   F +M+ + +  NV TY SLI  FC    W++   
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQ 321

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+ + + PNVV+ + +++ L K GK+  A  L + M+   + PN  TYN+L+ G C
Sbjct: 322 LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC 381

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              +++   ++   M S GC  D ++YNILING+CK K+V++ + L+ ++  +G+    V
Sbjct: 382 NDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY+TL  G  + R+   A K+F EM    V     TY   +DGLC
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ I++  L K+   D  LS F  + + G+  +++TY+ LI  FC  G+   G  +
Sbjct: 263 PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQL 322

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVTF++LI  L  E ++ EA  L+ ++   G EPN ITYN+LI GLC 
Sbjct: 323 LRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCN 382

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +   M +   +      P+  TY+I+I+G CK   VD    LF +M    +
Sbjct: 383 DKRLDEANQMMDLMVSKGCD------PDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTY++LI GFC +     AK +  EMV QGV P +++  ++++ LC NG+++ A  
Sbjct: 437 IADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALG 496

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD M +C +  +   YN ++ G C   K++    LF S+ S G K D  SYNI+++G C
Sbjct: 497 ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA +L+ ++   G +P   TYNTL            +++L  EM+    ++D  
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616

Query: 369 TYRTFIDGL 377
           T +  +D L
Sbjct: 617 TVKIVMDML 625



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N ++  L         + L  R+ + G  P+ +TY  ++N  CK G  +    +
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+T +I  LC + R+ +A + F++++  G + NV TYN+LI   C 
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L ++M      I     PN VT+S +ID L KEG + +AK+L+ +M    +
Sbjct: 313 FGRWDDGAQLLRDM------ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY SLI+G C+    +EA  ++  MV +G  P++ + N+++N  CK  ++D+  R
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    +  +  TY+TL+ GFC + K+   K++F  M S G      +Y IL++G C
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N E+EEAL + +++    ++  +  YN + HG+    + + A  LF  +    V  D  
Sbjct: 487 DNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546

Query: 369 TYRTFIDGLCVRPQV 383
           +Y   + GLC R  +
Sbjct: 547 SYNIMLSGLCKRSSL 561



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K D+A  L   M++    P    +N L      T + + V  L   ME  G  +D ++ N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I+IN +C+ +++  A S   ++   G +P  VT+NTL +GL    +   A++L   M  +
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
               D  T  T ++GLC++ +V
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRV 211


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 214/368 (58%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SFNIL+ C          LS F ++  +GL PD+ T++ L++  C   +VS     F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M   +  I     PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A  L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TY++++DGFC   +++  + +F  M + GC  +  ++N LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+   G+     TYNTL HG + +     AL L  EM  + +  D  T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 DTLLDGLC 476



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            PN +T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHGF    D N A  LL EM+  G+ P++V+ + +++ LC NGK+ +A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +  +M               V+ DV+                               P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL  G  ++     AL +F EM  + V  DT T R  + GL  + +
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 383 VRFTYA 388
           ++   A
Sbjct: 667 LKRAVA 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++  ++  + K     + L+L +++  +  + P++  YS +I+  CK G+ S    
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I G C+  R  +A  L  ++      P+V+TYN LIN   
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L+ EM       G++  PNT+TYS +IDG CK+  +D A+ +F  M  + 
Sbjct: 337 KEGKFFEAEELYDEMLPR----GII--PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PN++T+ +LI G+C A   ++   LL EM + G+  +  + N +++     G ++ A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-----------GCKHD 296
            LL  M+   + P+  T +TL+DG C  GK+    E+F  M+             G + D
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YNILI+G     +  EA  LY E+P +GI P  +TY+++  GL +  + + A ++F 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M     + +  T+ T I+G C   +V
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRV 597



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             LIK  C+ S++  A + F K+   G  P+V+T+ TL++GLC       AL+ F +M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TY+++  G  +  + + A  +F  M     + +  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TYS +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN++TF +LI G C   RI +   L  ++   G   +  TYNTLI+G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L +EM +          P+ VT   ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++N L+  FC   K+      F  +  +G   D  ++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             ++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 CVR 380
           C +
Sbjct: 230 CKK 232


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 221/374 (59%), Gaps = 7/374 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           +P+PP +  F  +LG L K+KHY TVLSLF+++   G+ P+   ++ILINCFC++G +  
Sbjct: 65  NPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPF 123

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +  +IL+  + P+ +T  + IKG C + +I +A     KL A G   + ++Y TLIN
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G T  AL L + +       G + + + V YS IID +CK+  V+ A +L+ +M 
Sbjct: 184 GLCKVGETRAALELLRRVD------GKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              ++ N+VTY++LI GFC      +A GL  +M  + + P+V + N++++  CK G++ 
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A   L +M++  ++P+  TYN+LMDG+CL  ++N  K +  +M   G      SYNI+I
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NG+CK K V++A+ L+ E+  K I P V+TYN+L  GL +  +   AL+L   M      
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417

Query: 365 ADTCTYRTFIDGLC 378
            D  TY + +D LC
Sbjct: 418 PDIITYSSILDALC 431



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 188/359 (52%), Gaps = 8/359 (2%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL    H    L+   +L ++G   D  +Y  LIN  CK+G+      +  R+       
Sbjct: 151 CLKGQIH--QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQL 208

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +VV ++++I  +C +  + +A  L++++ +     N++TY+ LI+G C  G    A+ LF
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLF 268

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            +MT+ N        P+  T++I++D  CKEG V +AK     M  + + P++VTY SL+
Sbjct: 269 NKMTSEN------INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G+C  N+ N AK +L  M  +GV   V S N+++N  CK   +D A +L   M    + 
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           PN  TYN+L+DG C +G+I+   EL   M   G + D  +Y+ +++  CKN  V++A++L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +L  +GI+P + TY  L  GL +  + E A  +F ++          TY   I G C
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFC 501



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 187/348 (53%), Gaps = 6/348 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ ++  + K+K+ +    L+  + S  +  ++ TYS LI+ FC +G++     +F 
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+V TF  L+   C E R+ EA      +   G +P+++TYN+L++G C   
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                +N+ K + N     GV       +Y+I+I+G CK   VD+A +LF +M ++ + P
Sbjct: 330 E----VNMAKSILNTMSHRGVT--ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV+TY SLI G C +   + A  L+  M D+G QP++++ + I++ LCKN  +D A  LL
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             +    +RPN +TY  L+DG C  G++   + +F  +   G      +Y ++I G+C +
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
              +EALSL +++      P  +TY  +   LF+  + ++A KL  EM
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 163/307 (53%), Gaps = 6/307 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           + LF ++ S  + PD+YT++IL++ FCK G+V         +++    P++VT+ SL+ G
Sbjct: 265 IGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDG 324

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C  + +  A ++   +   G    V +YN +ING C+      A+ LFKEM +      
Sbjct: 325 YCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ---- 380

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            +F PN +TY+ +IDGLCK G +  A EL   M      P+++TY+S++   C  +  ++
Sbjct: 381 -IF-PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LLI++ DQG++PN+ +  ++++ LCK G++++A  + + ++         TY  ++ 
Sbjct: 439 AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQ 498

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC  G  +    L   M+   C  D  +Y I+I       E ++A  L  E+  +G+  
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLY 558

Query: 331 TVVTYNT 337
           + + Y +
Sbjct: 559 SFLEYGS 565



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 64/354 (18%)

Query: 97  IVEAAA-----------------------------------LFTKLKAFGCEPNVITYNT 121
           +V+A +                                   LF K++  G +PN + +N 
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGE-----------------------------IGVV 152
           LIN  C+ G    A ++  ++     E                             + + 
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F  + V+Y  +I+GLCK G    A EL  ++  + +  +VV Y+++I   C   + N+A 
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EMV + +  N+V+ + +++  C  GK+ +A  L + M   ++ P+ +T+N L+D F
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G++   K     M   G K D  +YN L++GYC   EV  A S+ N +  +G+  TV
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            +YN + +G  +I+  ++A+KLF EM    +  +  TY + IDGLC   ++ + 
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+         +   S+   ++  G+   + +Y+I+IN FCK+  V     +
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNV+T+ SLI GLC   RI  A  L   +   G +P++ITY+++++ LC+
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  ++ +         +PN  TY+I+IDGLCK G ++ A+ +F  +  +  
Sbjct: 433 NHLVDKAIALLIKLKDQG------IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N  V TYT +I GFC    ++EA  LL +M D    P+ ++  +I+  L    + D A +
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN----ILI 304
           LL  M+   +  +   Y +    F            F++ +S+ C     S N    +L 
Sbjct: 547 LLREMITRGLLYSFLEYGSWSLSFM------AAPAHFLNNDSLQCTSSQESGNWAKLLLE 600

Query: 305 NGYC---------KNKEVE-EALSLYNELPF--KGIKPTVVTYNTLFHGLFEIRQAERAL 352
             YC         ++K+VE  ++ +Y+   +  +G    V TY  +  G       + +L
Sbjct: 601 RIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESL 660

Query: 353 KLFVEMQGNDVAADTCTY 370
            L  +M+ N    D  TY
Sbjct: 661 ALLSKMEVNGCIPDAVTY 678



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 39/268 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H     P + +++ +L  L KN   D  ++L  +L   G+ P++YTY+ILI+  CK G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     IF  +L   +   V T+T +I+G C+     EA +L +K+K   C P+ ITY 
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529

Query: 121 TLINGLCRTGHTIVALNLFKEMTN----------GNGEIGVVFKP--------------- 155
            +I  L        A  L +EM            G+  +  +  P               
Sbjct: 530 IIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQ 589

Query: 156 ------NTVTYSIIIDG-LCKEGFVDKAKELFLQMKYENLNP-------NVVTYTSLIHG 201
                   +   I  D  L K    DK  E    + Y   +        +V TYT +I G
Sbjct: 590 ESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQG 649

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           FC    ++E+  LL +M   G  P+ V+
Sbjct: 650 FCSHGLFDESLALLSKMEVNGCIPDAVT 677



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 6/191 (3%)

Query: 194 TYTSLIHGFCHA------NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           T+   IH F  +      ND  +A  L   ++ Q   P  +    I+  L K+       
Sbjct: 31  THFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVL 90

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M    ++PN   +N L++ FC  G I     +   +  MG + D  + N  I G+
Sbjct: 91  SLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGF 150

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   ++ +AL+ +++L   G     V+Y TL +GL ++ +   AL+L   + G  V  D 
Sbjct: 151 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDV 210

Query: 368 CTYRTFIDGLC 378
             Y T ID +C
Sbjct: 211 VMYSTIIDSMC 221



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 27/41 (65%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V T+T +I+G C+     E+ AL +K++  GC P+ +TY+
Sbjct: 639 DVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 204/338 (60%), Gaps = 6/338 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           GL P+  T +ILINCFC++ +V LGF +  + ++    P +VTFT+LI GL    +  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF  + A GC+P+  TY T+INGLC+ G T +A  LFK+M     ++      N VTY
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQL------NVVTY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +I  LCK   V++A ++F  MK ++++P + TYTSLI G C+ + W EA  LL EM  
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
             + PNVV+ NV+++  CK GK+  A  +L  M +  V P+  TYN+LM G+ +  ++  
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            ++LF  M + GCK D FSY+ILINGYCK K ++EA  L+NE+  +G  P  V+YNTL H
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL ++ +   A  LF  M  N    +  TY   +DG C
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 202/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K   +   + LF  + + G  PD YTY+ +IN  CK+G+ +L   +
Sbjct: 43  PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++  +    NVVT+++LI  LC   R+ EA  +F+ +KA    P + TY +LI GLC 
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EMT+ N        PN VT+++++D  CKEG V  A+ +   M    +
Sbjct: 163 FSRWKEASALLNEMTSLN------IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SL++G+    +  EA+ L   M+ +G +P+V S ++++N  CK  ++D A +
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+     PN  +YNTL+ G C  G++   ++LF +M + G   + ++Y IL++G+C
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + +A  L+  +    +KP +V YN L + + +    + A +LF E+    +  +  
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQ 396

Query: 369 TYRTFIDGLC 378
            Y T I+GLC
Sbjct: 397 IYTTIINGLC 406



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 186/390 (47%), Gaps = 29/390 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++  L K         LFK++   G   ++ TYS LI+  CK  +V+    I
Sbjct: 78  PDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDI 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P + T+TSLI+GLC  SR  EA+AL  ++ +    PNV+T+N L++  C+
Sbjct: 138 FSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCK 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G  + A  + K MT    E  VV                              KP+  +
Sbjct: 198 EGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFS 257

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YSI+I+G CK   +D+AK+LF +M ++   PN V+Y +LIHG C      EA+ L   M 
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMH 317

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  PN+ +  ++++  CK G +  A RL   M    ++PN   YN L++  C +G + 
Sbjct: 318 TNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLK 377

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +ELF  +  +G + +   Y  +ING CK   ++EAL  +  +   G  P   +YN + 
Sbjct: 378 DARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVII 437

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            G  + +   RA+ L  EM+      D  T
Sbjct: 438 RGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   L+PN  T   LI+ FC     +    +L + +  G+QP +V+   ++N L K GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A  L D MV    +P+ +TY T+++G C  G+      LF  ME  GC+ +  +Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+  CK + V EAL +++ +  K I PT+ TY +L  GL    + + A  L  EM   +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +  +  T+   +D  C   +V
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKV 201



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 7/184 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H   +P  VS +N L+  L +         LFK +++ G  P+LYTY+IL++ FCK G
Sbjct: 281 MIHQGSTPNNVS-YNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +   F +F  +  +   PN+V +  L+  +C    + +A  LF++L   G +PNV  Y 
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+INGLC+ G    AL  F+ M +          P+  +Y++II G  +     +A  L 
Sbjct: 400 TIINGLCKEGLLDEALEAFRNMEDDG------CPPDEFSYNVIIRGFLQHKDESRAVHLI 453

Query: 181 LQMK 184
            +M+
Sbjct: 454 GEMR 457


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 224/383 (58%), Gaps = 6/383 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H     P +  F  +LG L K  HY  V+SL +++   G+  +L T SILINCF ++G
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             SL F +F  IL+  + P+ +T T+LIKGLC +  I +A     K+ A G + N ++Y 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  AL + + +       G + + + V Y+ IIDG+CK+  V+ A + +
Sbjct: 179 TLINGLCKVGQTKAALEMLRRID------GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + + P VVTY +LI G C      +A GLL +M+ + + P V + +++++  CK 
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +  +M++ DV+PN  TYN+LM+G+CL  ++N+ + +F +M  +G   D  SY
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +I+I+G+CK K V+EA+ L+ E+  K I P VVTYN+L  GL +  +   ALKL  EM  
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                +  TY + +D LC    V
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHV 435



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 201/371 (54%), Gaps = 18/371 (4%)

Query: 17  LLGCLAKNKHY-DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           L G + K  H+ D VL+L  +LN +       +Y  LIN  CK+GQ      +  RI   
Sbjct: 151 LKGDIHKALHFHDKVLALGFQLNQV-------SYRTLINGLCKVGQTKAALEMLRRIDGK 203

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
               +VV + ++I G+C +  + +A   ++++ A    P V+TYNTLI GLC  G    A
Sbjct: 204 LVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDA 263

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + L  +M   N        P   T+SI++D  CKEG V +AK +F+ M  +++ PN+VTY
Sbjct: 264 IGLLHKMILEN------INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTY 317

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            SL++G+C  N+ N+A+ +   M   GV P+V S +++++  CK   +D A +L + M  
Sbjct: 318 NSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHC 377

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + P+  TYN+L+DG C +G+I+   +L   M   G   +  +YN L++  CKN  V++
Sbjct: 378 KQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDK 437

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A+ L  +L    I+P+V TYN L +GL +  + + A K+F ++  N    D  TY T I 
Sbjct: 438 AIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIK 497

Query: 376 GLC----VRPQ 382
           G C    V PQ
Sbjct: 498 GFCKKGFVIPQ 508



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 165/299 (55%), Gaps = 6/299 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N ++  + K+K  +     +  + +  + P + TY+ LI   C MGQ+     +  
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH 268

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +++     P V TF+ L+   C E ++ EA  +F  +     +PN++TYN+L+NG C   
Sbjct: 269 KMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVN 328

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A ++F  M     +IGV   P+  +YSI+I G CK   VD+A +LF +M  + + P
Sbjct: 329 EVNKAESIFNTM----AQIGVA--PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFP 382

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTY SLI G C +   + A  L+ EM D+G  PN+++ N +++ LCKN  +D A  LL
Sbjct: 383 DVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELL 442

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
             +   +++P+  TYN L++G C +G++   +++F  +   G   D ++YN +I G+CK
Sbjct: 443 TKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 151/268 (56%), Gaps = 6/268 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L         + L  ++    + P +YT+SIL++ FCK G+V     +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    PN+VT+ SL+ G C  + + +A ++F  +   G  P+V +Y+ +I+G C+
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCK 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+EM         +F P+ VTY+ +IDGLCK G +  A +L  +M     
Sbjct: 362 IKMVDEAMKLFEEM-----HCKQIF-PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++TY SL+   C  +  ++A  LL ++ D  +QP+V + N+++N LCK+G++ +A +
Sbjct: 416 PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQK 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           + + ++      + +TYNT++ GFC  G
Sbjct: 476 VFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 8/166 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++I++    K K  D  + LF+ ++   +FPD+ TY+ LI+  CK G++S    +
Sbjct: 347 PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKL 406

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      PN++T+ SL+  LC    + +A  L TKLK    +P+V TYN LINGLC+
Sbjct: 407 IGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCK 466

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           +G    A  +F++ + NG       +  +  TY+ +I G CK+GFV
Sbjct: 467 SGRLKDAQKVFEDVLVNG-------YNIDVYTYNTMIKGFCKKGFV 505



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N LL  L KN H D  + L  +L    + P + TY+ILIN  CK G++
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                +F  +L + +  +V T+ ++IKG C +  ++
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 221/369 (59%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF+ LL  L   KHY +V+S+F+ ++ + +  D +  S ++N  C M +  LGF +
Sbjct: 70  PSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
                +     N VTFT+LI+GL AE+++ +A  LF KL +   CEP+ + Y T+++GLC
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GHT  A +L + M  G      + KP+T  Y+I+ID  CK+G +D A  L  +MK +N
Sbjct: 190 KKGHTQKAFDLLRLMEQG------ITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN 243

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+++TYTSLI G    + W + + L +EM+   + P+V + N +++ LCK GK+++A 
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++  M++  V PN  TYN +MDG+CL G++ R + +F SM   G + D  SY  LINGY
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            + K++++A+ L+ E+   G+KP++VT + L  GLFE+ + E A   F EMQ      + 
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423

Query: 368 CTYRTFIDG 376
            T+ T + G
Sbjct: 424 YTHCTLLGG 432



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 8/369 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQVSLGFVIF 69
           V+   ++ G  A+NK  D V  LFK+L    +  PD   Y  +++  CK G     F + 
Sbjct: 143 VTFTTLIRGLFAENKVKDAV-HLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLL 201

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             + +    P+   +  +I   C +  +  A +L  ++K     P++ITY +LI+GL + 
Sbjct: 202 RLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKL 261

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                   LF EM + N        P+  T++ +IDGLCKEG V+ A+E+   M  + + 
Sbjct: 262 SQWEKVRTLFLEMIHLN------IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE 315

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PN +TY  ++ G+C       A+ +   M+D+G++P+++S   ++N   +  KMD A +L
Sbjct: 316 PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQL 375

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              + Q  ++P+  T + L+ G    G+    K  F  M++ G   + +++  L+ GY K
Sbjct: 376 FREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFK 435

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N  VEEA+S +++L  +     +  Y  + +GL +  + ++A   F ++    +  D  T
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 370 YRTFIDGLC 378
           Y   I G C
Sbjct: 496 YTAMISGYC 504



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P    +NI++    K+   D   SL   +    + PD+ TY+ LI+   K+ Q     
Sbjct: 209 TKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVR 268

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++     P+V TF S+I GLC E ++ +A  + T +   G EPN ITYN +++G 
Sbjct: 269 TLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGY 328

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C  G    A  +F  M +   E      P+ ++Y+ +I+G  ++  +DKA +LF ++   
Sbjct: 329 CLRGQMGRARRIFDSMIDKGIE------PDIISYTALINGYVEKKKMDKAMQLFREISQN 382

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P++VT + L+ G         AK    EM   G  PN+ +   ++    KNG ++ A
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                 + +     N   Y  +++G C  GK+++    F  +  +G   D  +Y  +I+G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC+   ++EA  +  ++   G  P   TYN +  G F   +         E+ G   + +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFE 562

Query: 367 TCTYRTFIDGLCVRPQV 383
             T    +D +   P +
Sbjct: 563 AATVELLMDIIAEDPSL 579



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 12/268 (4%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A +LF++M            P+ V++S ++  L           +F ++    +  +   
Sbjct: 56  AFSLFRQMVTTKP------LPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFA 109

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
            +++++  C  +  +    +L     +G+  N V+   ++  L    K+ +A  L   +V
Sbjct: 110 LSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLV 169

Query: 255 QCDV-RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           + ++  P+   Y T+MDG C  G   +  +L   ME    K D   YNI+I+ +CK+  +
Sbjct: 170 RENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGML 229

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + A SL NE+  K I P ++TY +L  GL ++ Q E+   LF+EM   ++  D CT+ + 
Sbjct: 230 DGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSV 289

Query: 374 IDGLCVRPQVR-----FTYARRKGNSGN 396
           IDGLC   +V       TY   KG   N
Sbjct: 290 IDGLCKEGKVEDAEEIMTYMIEKGVEPN 317



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 9/293 (3%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A +LF ++      P+ ++++ L+  L    H    +++F+E+        +    +  
Sbjct: 55  DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHK------LRIPVDAF 108

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
             S +++  C     D    +      + +  N VT+T+LI G    N   +A  L  ++
Sbjct: 109 ALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 219 VDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           V + + +P+ V    +M+ LCK G    A  LL LM Q   +P+   YN ++D FC  G 
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM 228

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   M+      D  +Y  LI+G  K  + E+  +L+ E+    I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNS 288

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           +  GL +  + E A ++   M    V  +  TY   +DG C+R Q+    ARR
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQM--GRARR 339



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 118/237 (49%), Gaps = 6/237 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+  L+    + K  D  + LF+ ++  GL P + T S+L+    ++G+     + 
Sbjct: 351 PDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIF 410

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   PN+ T  +L+ G      + EA + F KL+    + N+  Y  +INGLC+
Sbjct: 411 FDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCK 470

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F+++      IG+   P+ +TY+ +I G C+EG +D+AK++  +M+    
Sbjct: 471 NGKLDKAHATFEKLP----LIGL--HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            P+  TY  ++ GF  ++  +E K  L E+  +       +  ++M+ + ++  + N
Sbjct: 525 LPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLN 581



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 5/160 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            V+ N   SN   N  C    +D+A  L   MV     P+A +++ L+         + V
Sbjct: 36  SVKGNFGVSNEFENVKC----LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSV 91

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  +  +    D F+ + ++N  C     +   S+      KGI    VT+ TL  G
Sbjct: 92  VSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRG 151

Query: 342 LFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLCVR 380
           LF   + + A+ LF ++ + N    D   Y T +DGLC +
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKK 191


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  273 bits (699), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 145/381 (38%), Positives = 221/381 (58%), Gaps = 6/381 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           HM     P+  FN +L  L K  H+ T +S  K++    + PDL+T++ILINCFC +G +
Sbjct: 56  HMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHL 115

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +  F +  +I +  F P+ VT T+LIKGLC   ++ EA      + A G   + ++Y TL
Sbjct: 116 NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTL 175

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+TG T  AL + +++       G++ +PN V Y+ IID LCK+  V  A +L  +
Sbjct: 176 INGLCKTGETRAALQVLRKID------GLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSE 229

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + P+VVTYT+LI+G        EA GL  +M+ + ++P+V + N++++ LCK G+
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGE 289

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M  A  +L +M++  V  N  TYN+LMDG+ L  + N+   +F +M   G   D  SY+I
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +ING CK K V+EA++L+ E+  K + P  VTYN+L  GL +  +   A  L  EM    
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
             AD  TY + +D LC   QV
Sbjct: 410 QPADVITYSSLLDALCKNHQV 430



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 193/363 (53%), Gaps = 8/363 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K+K       L   +    +FPD+ TY+ LI     +G++     +
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L     P+V TF  L+ GLC E  + +A  +   +   G + N++TYN+L++G   
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F  M       GV   P+  +YSI+I+GLCK   VD+A  LF +M  +++
Sbjct: 322 VKQENKATFVFNTMARR----GVT--PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY SLI G       ++A  L+ EM ++G   +V++ + +++ LCKN ++D A  
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  +    ++PN +TY  L+DG C  G++   + ++  +   G   D   YN+++NG C
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAAD 366
           K    +EALSL +++   G  P  VTY TL   LFE  + ++A+KL  EM  QG+ V ++
Sbjct: 496 KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSN 555

Query: 367 TCT 369
             +
Sbjct: 556 ISS 558



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 111/222 (50%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I+  L K      A     QM+ + + P++ T+  LI+ FCH    N A  +L ++   G
Sbjct: 70  ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P+ V+   ++  LC NGK+  A    D ++      +  +Y TL++G C TG+     
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++   ++ +  + +   YN +I+  CK+K V  A  L +E+  K I P VVTY TL +G 
Sbjct: 190 QVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC 249

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             + + + A+ LF +M   ++  D  T+   +DGLC   +++
Sbjct: 250 LIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMK 291



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V +++ LL  L KN   D  ++L  ++   G+ P++YTY+IL++  CK G++
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                ++  +L   +  +V  +  ++ GLC E    EA +L +K++  GC P+ +TY TL
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +  L        A+ L +EM      +G     N++
Sbjct: 526 VRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSM 561



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 1/127 (0%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P  F +N ++         +        ME    + D F++NILIN +C    +  A 
Sbjct: 61  VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           S+  ++   G  P  VT  TL  GL    +   AL    ++       D  +Y T I+GL
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179

Query: 378 CVRPQVR 384
           C   + R
Sbjct: 180 CKTGETR 186


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  273 bits (699), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 221/369 (59%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SF+ LL  L   KHY +V+SLF+ ++ + +    +  SI++N  C M +  LGF +
Sbjct: 70  PSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
                +     N V F +L++GL AE+++ +A  LF KL +   CEPN + Y T++NGLC
Sbjct: 130 LAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLC 189

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GHT  A +L + M  G+       KPNT  YSI+ID  CK+G +D A  L  +MK ++
Sbjct: 190 KKGHTQKAFDLLRLMEQGST------KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++ TY++LI   C  + W   + L +EM+   + PNV + N +++ LCK GK+++A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++  M++  V P+  TYN ++DG+ L G+++R +E+F SM +   + +  SYNILINGY
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            + K+++EA+ +  E+  KG+KP++VT N L HGLFE+ + + A   F EM       D 
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423

Query: 368 CTYRTFIDG 376
            T+ T + G
Sbjct: 424 YTHCTLLGG 432



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 174/377 (46%), Gaps = 6/377 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P    ++I++    K+   D   SL   +    + PD++TYS LI+  CK+ Q     
Sbjct: 209 TKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++     PNV TF S+I GLC E ++ +A  +   +   G +P+VITYN +I+G 
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
              G    A  +F  M N + E      PN ++Y+I+I+G  ++  +D+A ++  ++  +
Sbjct: 329 GLRGQVDRAREIFDSMINKSIE------PNIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P++VT   L+HG         A+    EM+  G  P++ +   ++    KNG ++ A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                 + +     N   Y  ++DG C  GK+++    F  +  +G   D  +Y  +I+G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC+   ++EA  +  ++   G      TYN +  G     +         E+ G   + +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFE 562

Query: 367 TCTYRTFIDGLCVRPQV 383
             T    +D +   P +
Sbjct: 563 AATVELLMDIIAEDPSL 579



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 7/286 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A +LF ++      P+V++++ L+  L    H    ++LF+E+        +    +  
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHK------LRIPVHEF 108

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
             SI+++  C     D    +      + +  N V + +L+ G    N   +A  L  ++
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKL 168

Query: 219 VDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           V + + +PN V    +MN LCK G    A  LL LM Q   +PN   Y+ ++D FC  G 
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGM 228

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   M+      D F+Y+ LI+  CK  + E   +L+ E+    I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  GL +  + E A ++   M    V  D  TY   IDG  +R QV
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQV 334



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 120/237 (50%), Gaps = 6/237 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+NIL+   A+ K  D  + + + ++  GL P + T ++L++   ++G+       
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L +   P++ T  +L+ G      + EA + F KL+    + N+  Y  +I+GLC+
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F+++      IG+   P+ +TY+ +I G C+EG +D+AK++  +M+    
Sbjct: 471 NGKLDKAHATFEKLP----LIGL--HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             +  TY  ++ GF  +N  +E K  L E+  +       +  ++M+ + ++  + N
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLN 581



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 5/160 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            V+ N   SN   N  C    +D+A  L   MV+    P+  +++ L+         + V
Sbjct: 36  SVKGNFGVSNEFENVKC----LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSV 91

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             LF  +  +     +F  +I++N  C     +   S+      KGI    V +NTL  G
Sbjct: 92  VSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRG 151

Query: 342 LFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLCVR 380
           LF   + + A+ LF ++ + N    +   Y T ++GLC +
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKK 191


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 215/368 (58%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SF IL+ C          LS F +L  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M     E+  +  PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALNLLRKME----EVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A  L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TY++++DGFC   +++  + +F  M + GC  +  ++N LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+   G+     TYNTL HG + +     AL L  EM  + +  D  T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 DTLLDGLC 476



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            PN +T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHGF    D N A  LL EM+  G+ P++V+ + +++ LC NGK+ +A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +  +M               V+ DV+                               P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL  G  ++     AL +F EM  + V  DT T R  + GL  + +
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 383 VRFTYA 388
           ++   A
Sbjct: 667 LKRAVA 672



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++  ++  + K     + L+L +++  +  + P++  YS +I+  CK G+ S    
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I G C+  R  +A  L  ++      P+V+TYN LIN   
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L+ EM       G++  PNT+TYS +IDG CK+  +D A+ +F  M  + 
Sbjct: 337 KEGKFFEAEELYDEMLPR----GII--PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PN++T+ +LI G+C A   ++   LL EM + G+  +  + N +++     G ++ A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-----------GCKHD 296
            LL  M+   + P+  T +TL+DG C  GK+    E+F  M+             G + D
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YNILI+G     +  EA  LY E+P +GI P  +TY+++  GL +  + + A ++F 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M     + +  T+ T I+G C   +V
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRV 597



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           T LIK  C+ S++  A + F KL   G  P+V+T+NTL++GLC       ALNLF +M  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TY+++  G  +  + + A  +F  M     + +  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TYS +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN++TF +LI G C   RI +   L  ++   G   +  TYNTLI+G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L +EM +          P+ VT   ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++  L+  FC   K+      F  +  +G   D  ++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 CVR 380
           C +
Sbjct: 230 CKK 232


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 220/376 (58%), Gaps = 7/376 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +M P P  V  FN ++G + K KH    +SL K++   G+ P ++T SI INC+C +G++
Sbjct: 77  NMQPLPS-VIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEM 135

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F + G +L+  + PN +T T+++KGLC    + +A      + A G   + + Y TL
Sbjct: 136 GFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTL 195

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G +I A  L +EM       G V KPN V Y++IID  CK+    KA++L+L+
Sbjct: 196 INGLCKIGRSIDAFQLLQEME------GQVVKPNIVIYNMIIDSFCKDELTCKARDLYLK 249

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +    ++P+++TYTSLI GFC    W E K L+ EMV++ + PNV + NV+++  C+ GK
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGK 309

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M  A  + +LMV+   +P+  T+NTL+ G CL G +   ++LF ++   G   D +SY I
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI GYCK K ++EA+SL+NE+  K +   +V Y++L  GL +  +   A +LF  +  + 
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429

Query: 363 VAADTCTYRTFIDGLC 378
              +  TY   ID  C
Sbjct: 430 PPPNVITYNILIDAFC 445



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+  L K         L + +    + P++  Y+++I+ FCK         ++ +I+
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 251

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+++T+TSLI+G C   +  E   L  ++      PNV T+N LI+  CR G  I
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F  M    G+     +P+ VT++ +I G C  G V +A++LF  +    + P+V 
Sbjct: 312 EAQGMFNLMVK-RGQ-----QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +YT LI G+C     +EA  L  EM  + +  ++V  + +++ LCK+G++  A  L   +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 PN  TYN L+D FC    I+   ELF  M   G      +YNILINGYCK+K +
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA++L + +  K + P  +TYN+LF GL +  +   A +LF  M       D  TY   
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545

Query: 374 IDGLC 378
           +D  C
Sbjct: 546 LDAFC 550



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 165/305 (54%), Gaps = 6/305 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    +   +  V  L   + +  + P++YT+++LI+ FC+ G++     +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 316

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    P++VTF +LI G C    ++EA  LF  +   G  P+V +Y  LI G C+
Sbjct: 317 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 376

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++LF EM   N  + +V       YS +IDGLCK G +  A ELF  +  +  
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVL------YSSLIDGLCKSGRISYAWELFSTINNDGP 430

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY  LI  FC   D +    L   M  +G+ P V++ N+++N  CK+ ++  A  
Sbjct: 431 PPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMN 490

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M   ++ P++ TYN+L DG C +G+I+   ELF  M   G   D  +YN+L++ +C
Sbjct: 491 LLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFC 550

Query: 309 KNKEV 313
           K ++V
Sbjct: 551 KAQDV 555



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 101/210 (48%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF  +      P+V+ + ++I           A  LL +MV +GV P++ + ++
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
            +N  C  G+M  A  +L ++++   +PN  T  T+M G C+ G++ +  +   ++ + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D+  Y  LING CK     +A  L  E+  + +KP +V YN +     +     +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            L++++    +  D  TY + I G C   Q
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQ 274



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++NIL+    K +  D  + LFK +   GL P + TY+ILIN +CK  ++     
Sbjct: 431 PPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMN 490

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +     AP+ +T+ SL  GLC   RI +A  LF  +   G   +V TYN L++  C
Sbjct: 491 LLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFC 550

Query: 128 RT 129
           + 
Sbjct: 551 KA 552


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/408 (37%), Positives = 225/408 (55%), Gaps = 35/408 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SFN+LLG LAK KHY  V SL+K+++  GL P+ +T +ILINC C + +V  G     
Sbjct: 91  IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMA 150

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I+R  + P+VVT+TSLIKGLC E RI EA  LF +++  GC PNV+TY TLI GLCRTG
Sbjct: 151 GIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +  +AL L +EM NG     +  KPN  +Y+IIID LCK G   +AK LF +M  + + P
Sbjct: 211 NINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRP 270

Query: 191 NVV-----------------------------------TYTSLIHGFCHANDWNEAKGLL 215
           +VV                                   T+TSLI GFC   D + AK L 
Sbjct: 271 DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + M  +G +P+V+S  V++   CK   ++ A +L + M++    P+  T+  L+ G  L 
Sbjct: 331 LSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLA 390

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK+   K+LF  ++      + +  ++ ++G CKN  + EA+ L+NEL    +K  + ++
Sbjct: 391 GKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESF 450

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           N L  GL + R+ E A +LF ++    +  D  TY   I+G C   QV
Sbjct: 451 NCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQV 498



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 176/365 (48%), Gaps = 54/365 (14%)

Query: 57  CKMGQVS--LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
           CK G ++       F  ++RS     +++F  L+  L       +  +L+ K+   G  P
Sbjct: 70  CKKGNITSTQALQFFDLMMRS-----IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           N  T N LIN LC        L+         G +   + P+ VTY+ +I GLC E  + 
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMA------GIMRRGYIPDVVTYTSLIKGLCMEHRIS 178

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHAND--------------------------- 207
           +A  LF++M+     PNVVTY +LI G C   +                           
Sbjct: 179 EATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIF 238

Query: 208 --------------WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
                         W EAK L  EMVDQGV+P+VV+ + +++ LCK G +  A + L+ M
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +   + P+ FT+ +L++GFCL G ++  KELF+SM S G + D  SY +LI GYCK   V
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA+ LYNE+   G  P + T+  L  GLF   +   A KLF  ++ + V  +      F
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVF 418

Query: 374 IDGLC 378
           +DGLC
Sbjct: 419 LDGLC 423



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 6/262 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+         D+   LF  + S G  PD+ +Y++LI  +CK   V     +
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +LR    P++ TF  L+KGL    ++ +A  LF  +K      N+   +  ++GLC+
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCK 424

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF E+ + N       K +  +++ +IDGLCK   ++ A ELF ++  E L
Sbjct: 425 NGCLFEAMELFNELKSYN------MKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY  +I+GFC     + A  L   M + G  PN+++ + +++   KN K++   +
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVK 538

Query: 249 LLDLMVQCDVRPNAFTYNTLMD 270
           LL  M+Q DV   A  Y  + D
Sbjct: 539 LLHKMIQKDVSLAASIYTIVED 560



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 119/234 (50%), Gaps = 6/234 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+ +L+    K  + +  + L+  +  +G +PD+ T+ +L+      G+V     +
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +       N+   +  + GLC    + EA  LF +LK++  + ++ ++N LI+GLC+
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF++++          +P+ VTY I+I+G CK G VD A  LF  M+    
Sbjct: 460 ARKLETAWELFEKLSQEG------LQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGC 513

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
            PN++TY++L+HGF   N   E   LL +M+ + V        ++ + + K+ K
Sbjct: 514 TPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEK 567



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  +   ++ L  L KN      + LF  L S  +  D+ +++ LI+  CK  ++  
Sbjct: 406 HAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLET 465

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F ++ +    P+VVT+  +I G C   ++  A  LF  ++  GC PN++TY+ L++
Sbjct: 466 AWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLH 525

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  +       + L  +M   +  +          Y+I+ D + K+
Sbjct: 526 GFYKNNKLEEVVKLLHKMIQKDVSLAASI------YTIVEDMVSKD 565


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 215/368 (58%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SF IL+ C          LS F ++  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ ALNL ++M     E+  +  PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALNLLRKME----EVSHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A  L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TY++++DGFC   +++  + +F  M + GC  +  ++N LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+   G+     TYNTL HG + +     AL L  EM  + +  D  T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 DTLLDGLC 476



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            PN +T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHGF    D N A  LL EM+  G+ P++V+ + +++ LC NGK+ +A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +  +M               V+ DV+                               P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL  G  ++     AL +F EM  + V  DT T R  + GL  + +
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 383 VRFTYA 388
           ++   A
Sbjct: 667 LKRAVA 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++  ++  + K     + L+L +++  +  + P++  YS +I+  CK G+ S    
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I G C+  R  +A  L  ++      P+V+TYN LIN   
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L+ EM       G++  PNT+TYS +IDG CK+  +D A+ +F  M  + 
Sbjct: 337 KEGKFFEAEELYDEMLPR----GII--PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PN++T+ +LI G+C A   ++   LL EM + G+  +  + N +++     G ++ A 
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-----------GCKHD 296
            LL  M+   + P+  T +TL+DG C  GK+    E+F  M+             G + D
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YNILI+G     +  EA  LY E+P +GI P  +TY+++  GL +  + + A ++F 
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M     + +  T+ T I+G C   +V
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRV 597



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           T LIK  C+ S++  A + F K+   G  P+V+T+NTL++GLC       ALNLF +M  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TY+++  G  +  + + A  +F  M     + +  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TYS +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN++TF +LI G C   RI +   L  ++   G   +  TYNTLI+G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L +EM +          P+ VT   ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++  L+  FC   K+      F  +  +G   D  ++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 CVR 380
           C +
Sbjct: 230 CKK 232


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/378 (38%), Positives = 217/378 (57%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H+HP+P     FN +L  L   K Y T +SL+K++    + PD +T +I+INCFC  G
Sbjct: 49  MFHVHPTPHTFH-FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFG 107

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           QV L F    +IL+  + PN +T  +L+KGLC E ++ EA     K+ A G   + I+Y 
Sbjct: 108 QVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYG 167

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LING+C+ G T  A+ L + +   +       +PN V YS+IID LCK+  VD+A +L+
Sbjct: 168 ILINGVCKIGETRAAIRLLRRIERWS------IRPNVVIYSMIIDRLCKDTLVDEAYDLY 221

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++P+VVTY+ L+ GFC     N A  LL EMV + + P++ +  ++++ LCK 
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  +L +MV+  V  +   Y+TLMDG+CL  ++N  K +F +M  MG   D   Y
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +I+ING CK K V+EAL+L+ E+  K + P  VTY +L   L +  +      LF EM  
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401

Query: 361 NDVAADTCTYRTFIDGLC 378
                D  TY   ID LC
Sbjct: 402 RGQPPDVITYNNLIDALC 419



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 197/354 (55%), Gaps = 13/354 (3%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           + +D VL+   RL+ I       +Y ILIN  CK+G+      +  RI R    PNVV +
Sbjct: 149 RFHDKVLAQGFRLSGI-------SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIY 201

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           + +I  LC ++ + EA  L+T++   G  P+V+TY+ L++G C  G    A++L  EM  
Sbjct: 202 SMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL 261

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            N        P+  TY+I++D LCKEG V +A+ +   M    +N +VV Y++L+ G+C 
Sbjct: 262 EN------INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
            N+ N AK +   M   GV P+V   ++++N LCK  ++D A  L + + Q ++ P+  T
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y +L+D  C +G+I+ V +LF  M   G   D  +YN LI+  CKN  ++ A++L+N++ 
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + I+P V T+  L  GL ++ + + AL+ F ++       +  TY   I+GLC
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLC 489



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +++++  L K+   D    L+  +   G+ PD+ TYSIL++ FC +GQ++    +
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P++ T+T L+  LC E ++ EA  +   +       +V+ Y+TL++G C 
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F  MT    ++GV   P+   YSI+I+GLCK   VD+A  LF ++  +N+
Sbjct: 316 VNEVNNAKRVFYTMT----QMGVT--PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYTSLI   C +   +    L  EM+D+G  P+V++ N +++ LCKNG +D A  
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    +RPN +T+  L+DG C  G++    E F  + + G   +  +Y ++ING C
Sbjct: 430 LFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K   ++EAL+L + +   G     VT+  +    F+  + ++A KL  EM
Sbjct: 490 KEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 163/320 (50%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+         +  + L   +    + PD+YTY+IL++  CK G+V     +
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++C   +VV +++L+ G C  + +  A  +F  +   G  P+V  Y+ +INGLC+
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 ALNLF+E+   N        P+TVTY+ +ID LCK G +    +LF +M     
Sbjct: 351 IKRVDEALNLFEEIHQKN------MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQ 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY +LI   C     + A  L  +M DQ ++PNV +  ++++ LCK G++ NA  
Sbjct: 405 PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALE 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               ++      N  TY  +++G C  G ++    L   ME  GC  D  ++ I+I  + 
Sbjct: 465 FFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFF 524

Query: 309 KNKEVEEALSLYNELPFKGI 328
              E ++A  L  E+  +G+
Sbjct: 525 DKDENDKAEKLVREMIARGL 544



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 6/181 (3%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P   ++  L+ CL K+     V  LF  +   G  PD+ TY+ LI+  CK G +
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F ++      PNV TFT L+ GLC   R+  A   F  L   G   NV TY  +
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVM 484

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G    AL L   M + NG I      + VT+ I+I     +   DKA++L  +
Sbjct: 485 INGLCKEGLLDEALALQSRMED-NGCIS-----DAVTFEIMIRAFFDKDENDKAEKLVRE 538

Query: 183 M 183
           M
Sbjct: 539 M 539


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PPP S F+ LLG + +  HY T +SLF +L S G+ P + T++ILINC+      +  F 
Sbjct: 52  PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   IL+S + PN+VTF ++I G C    I +A      L A G   +  TY TLINGL 
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    AL+L +EM   +       +PN V YS +IDGLCK+GFV  A  L  Q+    
Sbjct: 172 KNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  + VTY SLI G C    W E   LL +MV + V P+  + N++++ LCK G++  A 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M +   +P+  TYN LM+G+C    ++  +ELF  M   G + D  +YN+LI+GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK K V+EA+ L+ EL  K + PT+ +YN+L  GL    +     KL  EM G+    D 
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 368 CTYRTFIDGLC 378
            TY   ID LC
Sbjct: 406 VTYNILIDALC 416



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  ++ L+  L K+      L L  ++   G+  D  TY+ LI+  C +G+      +
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+  TF  LI  LC E RI+EA  +   +   G +P+++TYN L+ G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  LF  M     E      P+ + Y+++IDG CK   VD+A  LF ++  +NL
Sbjct: 313 RENVHEARELFNRMVKRGLE------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + +Y SLI G C++   +  K LL EM      P+VV+ N++++ LCK G++  A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +M++  V+PN  TYN +MDG+CL   +N  K++F  M   G + D  +YN+LINGYC
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + V+EA+ L+ E+  K + P + +YN+L  GL  + +     +L  EM  +  + D  
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 369 TYRTFIDGLC 378
           TY   +D  C
Sbjct: 547 TYNILLDAFC 556



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 214/399 (53%), Gaps = 38/399 (9%)

Query: 13  SFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+ GC +  + +  V  L  ++    + PD YT++ILI+  CK G++     +   
Sbjct: 232 TYNSLIDGCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           + +    P++VT+ +L++G C+   + EA  LF ++   G EP+V+ YN LI+G C+T  
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 132 TIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVTYSI 162
              A+ LFKE+ N N                  G I  V K           P+ VTY+I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +ID LCKEG + +A  + + M  + + PN+VTY +++ G+C  N+ N AK +   MV  G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++P++++ NV++N  CK   +D A  L   M   ++ P+  +YN+L+DG C  G+I  V+
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           EL   M   G   D  +YNIL++ +CK +  ++A+SL+ ++  +GI P   T + +   L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNL 589

Query: 343 F---EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               +++ AE ALK  + M G   + +  TY   I+ LC
Sbjct: 590 CKGEKLKMAEDALKHLL-MHG--CSPNVQTYTILINALC 625



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 177/391 (45%), Gaps = 40/391 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K K  D  + LFK L +  L P + +Y+ LI+  C  G++S    +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   P+VVT+  LI  LC E RI+EA  +   +   G +PN++TYN +++G C 
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +  VA ++F  M     E      P+ + Y+++I+G CK   VD+A  LF +M+++NL
Sbjct: 453 RNNVNVAKDIFNRMVKSGLE------PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV---------------- 232
            P++ +Y SLI G C+       + LL EM D G  P+V++ N+                
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 233 ------------------IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
                             I++ LCK  K+  A   L  ++     PN  TY  L++  C 
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G       L   ME      D  ++ I+I    +  E ++A  L  E+  +G+     +
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKS 686

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            N   +  F      +++  F  +Q +   +
Sbjct: 687 LNQSHNVFFPASSGFQSVTEFYRVQASHAGS 717



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 7/290 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP V ++NIL+  L K       L +   +   G+ P++ TY+ +++ +C    V
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           ++   IF R+++S   P+++ +  LI G C    + EA  LF +++     P++ +YN+L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+GLC  G       L  EM +          P+ +TY+I++D  CK    DKA  LF Q
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQS------PDVITYNILLDAFCKTQPFDKAISLFRQ 570

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +  E + P+  T  +++   C       A+  L  ++  G  PNV +  +++N LCK+G 
Sbjct: 571 I-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
              A  LL  M   D  P+A T+  ++       + ++ ++L   M + G
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 6/293 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    + +A   F ++      P    ++ L+  + R GH   A++LF ++ +       
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG----- 85

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  T++I+I+    +     A  L   +      PN+VT+ ++I+GFC      +A
Sbjct: 86  -ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                 ++ QG   +  +   ++N L KNG++  A  LL  M +  V+PN   Y+ L+DG
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G ++    L   +   G   D  +YN LI+G C     +E   L  ++  + + P 
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             T+N L   L +  +   A  +   M       D  TY   ++G C R  V 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PPP S F+ LLG + +  HY T +SLF +L S G+ P + T++ILINC+      +  F 
Sbjct: 52  PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFS 111

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   IL+S + PN+VTF ++I G C    I +A      L A G   +  TY TLINGL 
Sbjct: 112 LLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    AL+L +EM   +       +PN V YS +IDGLCK+GFV  A  L  Q+    
Sbjct: 172 KNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  + VTY SLI G C    W E   LL +MV + V P+  + N++++ LCK G++  A 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M +   +P+  TYN LM+G+C    ++  +ELF  M   G + D  +YN+LI+GY
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK K V+EA+ L+ EL  K + PT+ +YN+L  GL    +     KL  EM G+    D 
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 368 CTYRTFIDGLC 378
            TY   ID LC
Sbjct: 406 VTYNILIDALC 416



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  ++ L+  L K+      L L  ++   G+  D  TY+ LI+  C +G+      +
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+  TF  LI  LC E RI+EA  +   +   G +P+++TYN L+ G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  LF  M     E      P+ + Y+++IDG CK   VD+A  LF ++  +NL
Sbjct: 313 RENVHEARELFNRMVKRGLE------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + +Y SLI G C++   +  K LL EM      P+VV+ N++++ LCK G++  A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +M++  V+PN  TYN +MDG+CL   +N  K++F  M   G + D  +YN+LINGYC
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + V+EA+ L+ E+  K + P + +YN+L  GL  + +     +L  EM  +  + D  
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 369 TYRTFIDGLC 378
           TY   +D  C
Sbjct: 547 TYNILLDAFC 556



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 214/399 (53%), Gaps = 38/399 (9%)

Query: 13  SFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+ GC +  + +  V  L  ++    + PD YT++ILI+  CK G++     +   
Sbjct: 232 TYNSLIDGCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           + +    P++VT+ +L++G C+   + EA  LF ++   G EP+V+ YN LI+G C+T  
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 132 TIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVTYSI 162
              A+ LFKE+ N N                  G I  V K           P+ VTY+I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +ID LCKEG + +A  + + M  + + PN+VTY +++ G+C  N+ N AK +   MV  G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++P++++ NV++N  CK   +D A  L   M   ++ P+  +YN+L+DG C  G+I  V+
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           EL   M   G   D  +YNIL++ +CK +  ++A+SL+ ++  +GI P   T + +   L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNL 589

Query: 343 F---EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               +++ AE ALK  + M G   + +  TY   I+ LC
Sbjct: 590 CKGEKLKMAEDALKHLL-MHG--CSPNVQTYTILINALC 625



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 184/350 (52%), Gaps = 7/350 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K K  D  + LFK L +  L P + +Y+ LI+  C  G++S    +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   P+VVT+  LI  LC E RI+EA  +   +   G +PN++TYN +++G C 
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +  VA ++F  M     E      P+ + Y+++I+G CK   VD+A  LF +M+++NL
Sbjct: 453 RNNVNVAKDIFNRMVKSGLE------PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ +Y SLI G C+       + LL EM D G  P+V++ N++++  CK    D A  
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +V+  + P+ +T + ++D  C   K+   ++    +   GC  +  +Y ILIN  C
Sbjct: 567 LFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+    EA+ L +++      P  +T+  +   L +  + ++A KL  EM
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 7/290 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP V ++NIL+  L K       L +   +   G+ P++ TY+ +++ +C    V
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           ++   IF R+++S   P+++ +  LI G C    + EA  LF +++     P++ +YN+L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+GLC  G       L  EM +          P+ +TY+I++D  CK    DKA  LF Q
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQ------SPDVITYNILLDAFCKTQPFDKAISLFRQ 570

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +  E + P+  T  +++   C       A+  L  ++  G  PNV +  +++N LCK+G 
Sbjct: 571 I-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
              A  LL  M   D  P+A T+  ++       + ++ ++L   M + G
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 6/293 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    + +A   F ++      P    ++ L+  + R GH   A++LF ++ +       
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG----- 85

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  T++I+I+    +     A  L   +      PN+VT+ ++I+GFC      +A
Sbjct: 86  -ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                 ++ QG   +  +   ++N L KNG++  A  LL  M +  V+PN   Y+ L+DG
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G ++    L   +   G   D  +YN LI+G C     +E   L  ++  + + P 
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             T+N L   L +  +   A  +   M       D  TY   ++G C R  V 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 215/368 (58%), Gaps = 5/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + SF IL+ C          LS F ++  +GL PD+ T++ L++  C   +VS    +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  +   PNVVTFT+L+ GLC E RIVEA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ AL+L ++M     EI  +  PN V YS IID LCK+G    A+ LF +M+ + + P
Sbjct: 234 DTVSALDLLRKME----EISHII-PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY S+I GFC +  W++A+ LL EM+++ + P+VV+ N ++N   K GK   A  L 
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+   + PN  TY++++DGFC   +++  + +F  M + GC  +  ++N LI+GYC  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++ + L +E+   G+     TYNTL HG + +     AL L  EM  + +  D  T 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 371 RTFIDGLC 378
            T +DGLC
Sbjct: 469 DTLLDGLC 476



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+  +    +LF  +   G+FPDL+TY+ +I  FC  G+ S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L    +P+VVT+ +LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M            PN +T++ +IDG C    +D   EL  +M    L
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHGF    D N A  LL EM+  G+ P++V+ + +++ LC NGK+ +A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +  +M               V+ DV+                               P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL  G  ++     AL +F EM  + V  DT T R  + GL  + +
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 383 VRFTYA 388
           ++   A
Sbjct: 667 LKRAVA 672



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  +  + LF  +      P +  +  L+    +M +  L   ++ ++ R     ++ +F
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           T LIK  C+ S++  A + F K+   G  P+V+T+NTL++GLC       ALNLF +M  
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM-- 175

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +PN VT++ +++GLC+EG + +A  L  +M  + L P  +TY +++ G C 
Sbjct: 176 ----FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 205 ANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             D   A  LL +M +   + PNVV  + I++ LCK+G+  +A  L   M +  + P+ F
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN+++ GFC +G+ +  ++L   M       D  +YN LIN + K  +  EA  LY+E+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GI P  +TY+++  G  +  + + A  +F  M     + +  T+ T IDG C
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P+  TYS +I+ FCK  ++     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN++TF +LI G C   RI +   L  ++   G   +  TYNTLI+G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L +EM +          P+ VT   ++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676

Query: 358 MQ 359
           +Q
Sbjct: 677 LQ 678



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +M+     P+VV    +M  + +  + D    L   M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +++  L+  FC   K+      F  +  +G   D  ++N L++G C    V EAL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L++++     +P VVT+ TL +GL    +   A+ L   M  + +     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 378 C 378
           C
Sbjct: 230 C 230


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 223/405 (55%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  +AK   ++ V+SL +++ ++G+  DLYTYSI INCFC+  Q+SL   +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
             ++++  + P++VT +SL+ G C   RI                               
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 98  ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA AL  ++   GC+P+++TY T++NGLC+ G   +ALNL  +M           
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------I 254

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K N V ++ IID LCK   V+ A +LF +M+ + + PNVVTY SLI+  C+   W++A  
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL  M+++ + PNVV+ N +++   K GK+  A +L + M+Q  + P+  TYN L++GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  +++  K++F  M S  C  +  +YN LING+CK K VE+ + L+ E+  +G+    V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY T+  G F+    + A  +F +M  N V  D  TY   + GLC
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 187/358 (52%), Gaps = 13/358 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L K +H +  + LF  + + G+ P++ TY+ LINC C  G+ S    +   +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF +LI     E ++VEA  L  ++     +P+ ITYN LING C      
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +FK M + +        PN  TY+ +I+G CK   V+   ELF +M    L  N V
Sbjct: 381 EAKQMFKFMVSKDC------LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT++I GF  A D + A+ +  +MV   V  ++++ +++++ LC  GK+D A  +   +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + ++  N F YNT+++G C  GK+    +LF S+     K D  +YN +I+G C  + +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLL 551

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA--LKLFVEMQGNDVAADTCT 369
           +EA  L+ ++   G  P   TYNTL      +R  +RA   +L  EM+ +    D  T
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDAST 607



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 20/372 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V SF  L G     + + +    ++               IL N    + +V     
Sbjct: 24  PPTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDAVD 69

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F  L+  +   ++     +L  +++  G   ++ TY+  IN  C
Sbjct: 70  LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + ++P+ VT S +++G C    +  A  L  QM    
Sbjct: 130 RRSQLSLALAVLAKM------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+  T+T+LIHG    N  +EA  L+ +MV +G QP++V+   ++N LCK G +D A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M    ++ N   +NT++D  C    +    +LF  ME+ G + +  +YN LIN  
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C      +A  L + +  K I P VVT+N L    F+  +   A KL  EM    +  DT
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 368 CTYRTFIDGLCV 379
            TY   I+G C+
Sbjct: 364 ITYNLLINGFCM 375



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 10/238 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K K  +  + LF+ ++  GL  +  TY+ +I  F + G      ++
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ +    +++T++ L+ GLC+  ++  A  +F  L+    E N+  YNT+I G+C+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  ++          KP+ VTY+ +I GLC +  + +A +LF +MK +  
Sbjct: 516 AGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            PN  TY +LI       D   +  L+ EM   G   +  + +++ N L  +G++D +
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS 623



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 89/175 (50%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A  L  +MV     P++V  N +++ + K  K +    L + M    +  + +TY+  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++ FC   +++    +   M  +G + D  + + L+NGYC +K + +A++L +++   G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           KP   T+ TL HGLF   +A  A+ L  +M       D  TY T ++GLC R  +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 13/176 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + +++ILL  L      DT L +FK L    +  +++ Y+ +I   CK G+V   + 
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VVT+ ++I GLC++  + EA  LF K+K  G  PN  TYNTLI    
Sbjct: 525 LFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           R      +  L KEM +     G V   +T++   ++  +  +G +DK+   FL M
Sbjct: 582 RDCDRAASAELIKEMRSS----GFVGDASTIS---LVTNMLHDGRLDKS---FLNM 627



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 292 GCKHDDFS------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           GC    F+        IL N      +V++A+ L+ ++      P++V +N L   + ++
Sbjct: 37  GCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            + E  + L  +MQ   ++ D  TY  FI+  C R Q+    A
Sbjct: 97  NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 212/371 (57%), Gaps = 9/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V SFNIL+ C          LS F ++  +G  PD+ T+S L++  C   +VS    
Sbjct: 109 PCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALD 168

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F ++ R    PNVVTFT+L+ GLC E R+VEA AL  ++   G +PN ITY T+++G+C
Sbjct: 169 LFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 224

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T+ ALNL ++M   +       KPN V YS IIDGL K+G    A  L+ +M+ + 
Sbjct: 225 KIGDTVSALNLLRKMEEMSH-----IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++ TY  +I GFC +  W+EA+ LL EM+++ + PNVV+ + ++N   K  K   A 
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L D M+   + PN  TYN+++DGFC   +++  + +F  M + GC  D F++N LI+GY
Sbjct: 340 ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGY 399

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C  K +++   L +E+   G+     TYNTL HG   +     AL L  +M  + V  D 
Sbjct: 400 CGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 459

Query: 368 CTYRTFIDGLC 378
            T  T +DGLC
Sbjct: 460 VTCNTLLDGLC 470



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 205/372 (55%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L+G + + +  D V+SL++++    +  D+Y+++ILI CFC   ++      
Sbjct: 75  PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG+I +  F P+VVTF++L+ GLC E R+ EA  LF ++    C PNV+T+ TL+NGLCR
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YEN 187
            G  + A+ L   M           +PN +TY  I+DG+CK G    A  L  +M+   +
Sbjct: 191 EGRVVEAVALLDRMVEDG------LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH 244

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNVV Y+++I G       ++A  L  EM ++G+ P++ + N +++  C +G+   A 
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RLL  M++  + PN  TY+ L++ +    K    +EL+  M   G   +  +YN +I+G+
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  ++  +  KG  P V T+NTL  G    ++ +   +L  EM    + ADT
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 368 CTYRTFIDGLCV 379
            TY T I G C+
Sbjct: 425 TTYNTLIHGFCL 436



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 192/388 (49%), Gaps = 17/388 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M    P V  ++ ++  L K+  +    +L+  +   G+FPDL+TY+ +I+ FC  G
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSG 298

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           + S    +   +L     PNVVT+++LI     E +  EA  L+ ++   G  PN ITYN
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYN 358

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+G C+      A ++F  M            P+  T++ +IDG C    +D   EL 
Sbjct: 359 SMIDGFCKQNRLDAAEHMFYVMATKG------CSPDVFTFNTLIDGYCGAKRIDDGTELL 412

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L  +  TY +LIHGFC   D N A  L  +M+  GV P++V+ N +++ LC N
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472

Query: 241 GKMDNASRLLDLMVQCD-----------VRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
           GK+ +A  +   M +             V P+  TYN L+ G    GK    +EL+  M 
Sbjct: 473 GKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMP 532

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   +  +Y+ +ING CK   ++EA  +++ +  K   P VVT+NTL  G  +  + +
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVD 592

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGL 377
             L+LF EM    + AD  TY T I G 
Sbjct: 593 DGLELFCEMGRRGIVADAITYITLIHGF 620



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K + +     L+  +   G+ P+  TY+ +I+ FCK  ++     +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+V TF +LI G C   RI +   L  ++   G   +  TYNTLI+G C 
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCL 436

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    AL+L ++M +     GV   P+ VT + ++DGLC  G +  A E+F  M+    
Sbjct: 437 VGDLNAALDLSQQMISS----GVC--PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ PN ++ + ++N L
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      P+  T+NTL+ G+C  G+++   ELF  M   G   D 
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADA 610

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G+ K   +  AL ++ E+   G+ P  +T  ++   L+   + +RA+ +  +
Sbjct: 611 ITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670

Query: 358 MQ 359
           +Q
Sbjct: 671 LQ 672



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 4/181 (2%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +MV     P+V+  N +M  + +  + D    L   M +  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +  + +++N L+  FC   K+      F  +  +G + D  +++ L++G C    V EAL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L++++     +P VVT+ TL +GL    +   A+ L   M  + +  +  TY T +DG+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 378 C 378
           C
Sbjct: 224 C 224


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  271 bits (692), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 218/370 (58%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L         +     + S G  P +YT+++++N  CK+G+ S   V 
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P VV+++ +I  LC    + EA  LF  +++ G  P V+TYN+LI G+C 
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  LFKEM   N       KP+ VT+SI++D LCKEG V +A  +F +M    +
Sbjct: 292 SGQWKQASILFKEMLEWN------MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY+SLIHG C ++ W E+  LL EM+ + ++P+VV+ ++ ++  CK G +  A  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++LM++  +RPN  TYN+LMDG+CL  +++  +++F  M + GC  D  SYNILI GYC
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ ++EA  L++E+  KG+ P  +T+ TL  GL +  +   A +LF +M  +    D  
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 369 TYRTFIDGLC 378
           TY T + G C
Sbjct: 526 TYSTLLSGFC 535



 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 220/383 (57%), Gaps = 7/383 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HM+P P  ++ FN LL  L + KHYD+V+S+++++   G+   +YT +ILINC C + 
Sbjct: 95  MVHMNPFPC-ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLH 153

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V LGF + G+I +  F P+++TF +LI GLC E RIVEA      + + G +P V T+ 
Sbjct: 154 LVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHT 213

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            ++NGLC+ G T  A+   K+M   + E      P  V+YSIIID LCK   V++A +LF
Sbjct: 214 MIVNGLCKIGKTSAAIVWMKKMVELDCE------PEVVSYSIIIDSLCKNRLVNEAVDLF 267

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M+   ++P VVTY SLI+G C++  W +A  L  EM++  ++P+VV+ +++++ LCK 
Sbjct: 268 YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  +   M+Q  + P+  TY++L+ G C +        L   M S   + D  ++
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTF 387

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +I ++ +CK   V EA S+ N +  +G++P VVTYN+L  G     Q + A K+F  M  
Sbjct: 388 SIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN 447

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
              A D  +Y   I G C   ++
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERI 470



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 204/359 (56%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++I++  L KN+  +  + LF  + SIG+ P + TY+ LI   C  GQ     ++
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P+VVTF+ L+  LC E  ++EA ++F K+     EP+++TY++LI+G+C+
Sbjct: 302 FKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCK 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     +  L  EM + N       +P+ VT+SI +D  CK+G V +A+ +   M    L
Sbjct: 362 SSLWKESSTLLNEMLSRN------IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY SL+ G+C  +  +EA+ +   MV++G  P+V+S N+++   CK+ ++D A +
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    + PN+ T+ TL+ G C  G+    KELF  M S GC  D  +Y+ L++G+C
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K+  ++EAL+L+  L    +KP  V    L  G+ +  + E A +LF  +   ++  D 
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 36/77 (46%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  PP + +++ LL    K+ H D  L+LF+ L    L P+     IL+   CK G++  
Sbjct: 518 HGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577

Query: 65  GFVIFGRILRSCFAPNV 81
              +F  +      P+V
Sbjct: 578 AKELFSSLSIEELQPDV 594


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 224/413 (54%), Gaps = 42/413 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    P P  +  F+ L   +A+ K YD VL L K++   G+  +LYT SI+INC C+  
Sbjct: 63  MTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++SL F   G+I++  + P+ VTF++LI GLC E R+ EA  L  ++   G +P +IT N
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
            L+NGLC                                   ++G T +A+ L ++M   
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                   K + V YSIIIDGLCK+G +D A  LF +M+ +    +++ YT+LI GFC+A
Sbjct: 242 K------IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             W++   LL +M+ + + P+VV+ + +++   K GK+  A  L   M+Q  + P+  TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            +L+DGFC   ++++   +   M S GC  +  ++NILINGYCK   +++ L L+ ++  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +G+    VTYNTL  G  E+ + E A +LF EM    V  D  +Y+  +DGLC
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 192/399 (48%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L         L L  R+  +G  P L T + L+N  C  G+VS   ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++ + F PN VT+  ++K +C   +   A  L  K++    + + + Y+ +I+GLC+
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 129 TGHTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVT 159
            G    A NLF EM                      G  + G             P+ V 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +ID   KEG + +A+EL  +M    ++P+ VTYTSLI GFC  N  ++A  +L  MV
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  PN+ + N+++N  CK   +D+   L   M    V  +  TYNTL+ GFC  GK+ 
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             KELF  M S   + D  SY IL++G C N E E+AL ++ ++    ++  +  YN + 
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           HG+    + + A  LF  +    V  D  TY   I GLC
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 8/365 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++I++  L K+   D   +LF  +   G   D+  Y+ LI  FC  G+   G  +   ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    P+VV F++LI     E ++ EA  L  ++   G  P+ +TY +LI+G C+     
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 134 VALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            A ++   M + G G       PN  T++I+I+G CK   +D   ELF +M    +  + 
Sbjct: 370 KANHMLDLMVSKGCG-------PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI GFC       AK L  EMV + V+P++VS  ++++ LC NG+ + A  + + 
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  +  +   YN ++ G C   K++   +LF S+   G K D  +YNI+I G CK   
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + EA  L+ ++   G  P   TYN L         A ++ KL  E++    + D  T + 
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 373 FIDGL 377
            +D L
Sbjct: 603 VVDML 607



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + RS   P ++ F+ L   +    +      L  +++  G   N+ T + +IN  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +A +   ++      I + ++P+TVT+S +I+GLC EG V +A EL  +M    
Sbjct: 119 RCRKLSLAFSAMGKI------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P ++T  +L++G C     ++A  L+  MV+ G QPN V+   ++  +CK+G+   A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  ++ +A  Y+ ++DG C  G ++    LF  ME  G K D   Y  LI G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C     ++   L  ++  + I P VV ++ L     +  +   A +L  EM    ++ DT
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + IDG C   Q+
Sbjct: 353 VTYTSLIDGFCKENQL 368



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 101/205 (49%)

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D A +LF +M      P ++ ++ L         ++    L  +M  +G+  N+ + +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N  C+  K+  A   +  +++    P+  T++TL++G CL G+++   EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K    + N L+NG C N +V +A+ L + +   G +P  VTY  +   + +  Q   A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L  +M+   +  D   Y   IDGLC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC 258



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 6/168 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+ ILL  L  N   +  L +F+++    +  D+  Y+I+I+  C   +V   + +
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V T+  +I GLC +  + EA  LF K++  G  PN  TYN LI     
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTV--TYSIIIDGLCKEGFVD 174
            G    +  L +E+       G     +TV     ++ DG  K+ F+D
Sbjct: 575 EGDATKSAKLIEEIKR----CGFSVDASTVKMVVDMLSDGRLKKSFLD 618



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 66/142 (46%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K D+A  L   M +   RP    ++ L      T + + V +L   ME  G  H+ ++ +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I+IN  C+ +++  A S   ++   G +P  VT++TL +GL    +   AL+L   M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
                  T    ++GLC+  +V
Sbjct: 172 GHKPTLITLNALVNGLCLNGKV 193


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  270 bits (690), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 214/370 (57%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+     +A  K ++ VL   K++   G+  ++YT +I+INCFC+  +    + +
Sbjct: 63  PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+  TF +LI GLC ES++ EA  L  ++   GC+PNV+TYN+++NG+C+
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T +AL+L ++M   N       K +  TYS IID LC++G +D A  LF +M+ + +
Sbjct: 183 SGDTSLALDLLRKMDERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 236

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++VTY SL+ G C A  WN+   LL +M  + + PNV++ NV+++   K GK+  A+ 
Sbjct: 237 KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN  TYN+LMDG+C+  +++    +   M    C  D  ++  LI GYC
Sbjct: 297 LYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYC 356

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K V+E + L+ ++  +G+    VTY+ L  G  +  + E A +LF EM    V  D  
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416

Query: 369 TYRTFIDGLC 378
           TY   +DGLC
Sbjct: 417 TYGILLDGLC 426



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 190/367 (51%), Gaps = 8/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  + K+      L L ++++   +  D++TYS +I+  C+ G +     +
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       ++VT+ SL+ GLC   +  +   L   + +    PNVIT+N LI+   +
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK 287

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  L+KEM T G         PNT+TY+ ++DG C +  + +A  +   M   N
Sbjct: 288 EGKLQEANELYKEMITKG-------ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P++VT+TSLI G+C     +E   L  ++  +G+  N V+ ++++   C++GK++ A 
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   MV   V P+  TY  L+DG C  GK+ +  E+F  ++      D   Y I+I G 
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +VE+A +L+  LP KG+KP V+TY  +  GL +      A  L  +M+ +    + 
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 368 CTYRTFI 374
           CTY T I
Sbjct: 521 CTYNTLI 527



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +++ ++  L ++   D  +SLFK + + G+   L TY+ L+   CK G+ + G  +  
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLK 264

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PNV+TF  LI     E ++ EA  L+ ++   G  PN ITYN+L++G C   
Sbjct: 265 DMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQN 324

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A N+   M   N        P+ VT++ +I G CK   VD+  +LF ++    L  
Sbjct: 325 RLSEANNMLDLMVRNN------CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTY+ L+ GFC +     A+ L  EMV  GV P+V++  ++++ LC NGK++ A  + 
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + + +  +  +   Y  +++G C  GK+     LF S+   G K +  +Y ++I+G CK 
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L  ++   G +P   TYNTL            + KL  EM+    +AD  + 
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 558

Query: 371 RTFIDGL 377
           +  ID L
Sbjct: 559 KMVIDML 565



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 29/342 (8%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           L T ++  +  C +  +S G V +G  LRS                  + +  +A  LF 
Sbjct: 10  LDTGTLRTDFLCTISGISDGRVCYGERLRSGIV---------------DIKEDDAIDLFQ 54

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIII 164
           ++      P+++ ++   +G+  T    + L+  K+M  NG          N  T +I+I
Sbjct: 55  EMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNG-------IAHNIYTLNIMI 107

Query: 165 DGLC---KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           +  C   K  F        +++ YE   P+  T+ +LI+G C  +  +EA  L+  MV+ 
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYE---PDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G QPNVV+ N I+N +CK+G    A  LL  M + +V+ + FTY+T++D  C  G I+  
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             LF  ME+ G K    +YN L+ G CK  +  + + L  ++  + I P V+T+N L   
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +  + + A +L+ EM    ++ +T TY + +DG C++ ++
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL  L  N   +  L +F+ L    +  D+  Y+I+I   CK G+V   + +
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNV+T+T +I GLC +  + EA  L  K++  G EPN  TYNTLI    R
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLR 532

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G    +  L +EM +        F  +  +  ++ID L
Sbjct: 533 DGDLTASAKLIEEMKSCG------FSADASSIKMVIDML 565


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 224/413 (54%), Gaps = 42/413 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    P P  +  F+ L   +A+ K YD VL L K++   G+  +LYT SI+INC C+  
Sbjct: 63  MTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++SL F   G+I++  + P+ VTF++LI GLC E R+ EA  L  ++   G +P +IT N
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
            L+NGLC                                   ++G T +A+ L ++M   
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                   K + V YSIIIDGLCK+G +D A  LF +M+ +    +++ YT+LI GFC+A
Sbjct: 242 K------IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             W++   LL +M+ + + P+VV+ + +++   K GK+  A  L   M+Q  + P+  TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            +L+DGFC   ++++   +   M S GC  +  ++NILINGYCK   +++ L L+ ++  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +G+    VTYNTL  G  E+ + E A +LF EM    V  D  +Y+  +DGLC
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 192/399 (48%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L         L L  R+  +G  P L T + L+N  C  G+VS   ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++ + F PN VT+  ++K +C   +   A  L  K++    + + + Y+ +I+GLC+
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A NLF EM     +  ++                               P+ V 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +ID   KEG + +A+EL  +M    ++P+ VTYTSLI GFC  N  ++A  +L  MV
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  PN+ + N+++N  CK   +D+   L   M    V  +  TYNTL+ GFC  GK+ 
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             KELF  M S   + D  SY IL++G C N E E+AL ++ ++    ++  +  YN + 
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           HG+    + + A  LF  +    V  D  TY   I GLC
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 178/359 (49%), Gaps = 8/359 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++I++  L K+   D   +LF  +   G   D+  Y+ LI  FC  G+   G  +   ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    P+VV F++LI     E ++ EA  L  ++   G  P+ +TY +LI+G C+     
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 134 VALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            A ++   M + G G       PN  T++I+I+G CK   +D   ELF +M    +  + 
Sbjct: 370 KANHMLDLMVSKGCG-------PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI GFC       AK L  EMV + V+P++VS  ++++ LC NG+ + A  + + 
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  +  +   YN ++ G C   K++   +LF S+   G K D  +YNI+I G CK   
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           + EA  L+ ++   G  P   TYN L         A ++ KL  E++    + D  T R
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLR 601



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 30/394 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+ C  K         L K +   G+ PD  TY+ LI+ FCK  Q+     +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN+ TF  LI G C  + I +   LF K+   G   + +TYNTLI G C 
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   VA  LF+EM +         +P+ V+Y I++DGLC  G  +KA E+F +++   +
Sbjct: 435 LGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++  Y  +IHG C+A+  ++A  L   +  +GV+P+V + N+++  LCK G +  A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL----------------------FV 286
           L   M +    PN  TYN L+      G   +  +L                        
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 287 SMESMGCKHDDFSYNILINGYC--KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            M   G + D F++  L+  +C  +N  V +A +L+  +   G KP VVTYNT+  GL  
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                +   +  +M       +  T  TFI GLC
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + RS   P ++ F+ L   +    +      L  +++  G   N+ T + +IN  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +A +   ++      I + ++P+TVT+S +I+GLC EG V +A EL  +M    
Sbjct: 119 RCRKLSLAFSAMGKI------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P ++T  +L++G C     ++A  L+  MV+ G QPN V+   ++  +CK+G+   A 
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  ++ +A  Y+ ++DG C  G ++    LF  ME  G K D   Y  LI G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C     ++   L  ++  + I P VV ++ L     +  +   A +L  EM    ++ DT
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + IDG C   Q+
Sbjct: 353 VTYTSLIDGFCKENQL 368



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 30/326 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FNIL+    K    D  L LF++++  G+  D  TY+ LI  FC++G++ +   +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++V++  L+ GLC      +A  +F K++    E ++  YN +I+G+C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +LF  +           KP+  TY+I+I GLCK+G + +A  LF +M+ +  
Sbjct: 505 ASKVDDAWDLFCSLPLKG------VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIE----------------------MVDQGVQPN 226
           +PN  TY  LI       D  ++  L+ E                      M+  G +P+
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPD 618

Query: 227 VVSSNVIMNELC--KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           V +   ++   C  +N  + +A  L   M     +PN  TYNT++ G      I++V  +
Sbjct: 619 VFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGV 678

Query: 285 FVSMESMGCKHDDFSYNILINGYCKN 310
              M   GC+ +  + +  I+G CK 
Sbjct: 679 LDQMFERGCQPNAVTKSTFISGLCKQ 704



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 18/263 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+ ILL  L  N   +  L +F+++    +  D+  Y+I+I+  C   +V   + +
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V T+  +I GLC +  + EA  LF K++  G  PN  TYN LI     
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV----------------FKPNTVTYSIIIDGLCKE-- 170
            G    +  L +E+      +                    +P+  T++ ++   C E  
Sbjct: 575 EGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEEN 634

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             V  A  LF  MK     PNVVTY ++I G  + N  ++  G+L +M ++G QPN V+ 
Sbjct: 635 ASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTK 694

Query: 231 NVIMNELCKNGKMDNASRLLDLM 253
           +  ++ LCK     +A  LL  M
Sbjct: 695 STFISGLCKQDLHGSAILLLRKM 717



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 101/205 (49%)

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D A +LF +M      P ++ ++ L         ++    L  +M  +G+  N+ + +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N  C+  K+  A   +  +++    P+  T++TL++G CL G+++   EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K    + N L+NG C N +V +A+ L + +   G +P  VTY  +   + +  Q   A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L  +M+   +  D   Y   IDGLC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC 258



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL--GFVIFGRILRSCFAPNVVTFTSL 87
            LS   R+   G  PD++T++ L+  FC     S+     +F  +    + PNVVT+ ++
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           IKGL   + I +   +  ++   GC+PN +T +T I+GLC+      A+ L ++M N N 
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNE 722

Query: 148 EI 149
           ++
Sbjct: 723 DV 724



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 66/142 (46%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K D+A  L   M +   RP    ++ L      T + + V +L   ME  G  H+ ++ +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I+IN  C+ +++  A S   ++   G +P  VT++TL +GL    +   AL+L   M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
                  T    ++GLC+  +V
Sbjct: 172 GHKPTLITLNALVNGLCLNGKV 193


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/378 (38%), Positives = 218/378 (57%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP   FN +L  L K + + T +SL K L+  G+  DL T +ILINCFC +G
Sbjct: 60  MLLMRP-PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLG 118

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++L F +   IL+  + P+V+T T+LIKGLC    + +A      + A   + + I+Y 
Sbjct: 119 QITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYG 178

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  A+ L + +   +       KP+ V Y+IIID LCK   V +A  L+
Sbjct: 179 TLINGLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + + PNVVTYT+LI+GFC      EA  LL EM  + + P+V + +++++ L K 
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GKM  A  +L +M++  V+P+  TYN+L+DG+ L  ++   K +F SM   G      SY
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            I+I+G CK K V+EA+SL+ E+  K + P  +T+N+L  GL +  +      L  +M+ 
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412

Query: 361 NDVAADTCTYRTFIDGLC 378
               AD  TY + ID LC
Sbjct: 413 RSQLADVITYSSLIDALC 430



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 188/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +NI++  L KNK      +L+  +N+  ++P++ TY+ LI  FC MG +     +
Sbjct: 207 PDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVAL 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+V TF+ LI  L  E ++  A  +   +     +P+V+TYN+L++G   
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F  M       GV   P   +Y+I+IDGLCK   VD+A  LF +MK++N+
Sbjct: 327 VNEVKHAKYVFNSMAQS----GVT--PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +T+ SLI G C +        L+ +M D+    +V++ + +++ LCKN  +D A  
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+  +++P+ +TY  L+DG C  G++   +E+F  +   G   D  +Y ++I+G+C
Sbjct: 441 LFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K    +EAL+L +++   G  P  +T++ +   LFE  + ++A KL  EM
Sbjct: 501 KAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 179/354 (50%), Gaps = 13/354 (3%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K +D V++L  +L+ I       +Y  LIN  CK+G+      +   +      P+VV +
Sbjct: 160 KFHDDVVALEFQLDRI-------SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMY 212

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             +I  LC    + EA  L++++ A    PNV+TY TLI G C  G  I A+ L  EM  
Sbjct: 213 NIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKL 272

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            N        P+  T+SI+ID L KEG +  AK +   M    + P+VVTY SL+ G+  
Sbjct: 273 KN------INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
            N+   AK +   M   GV P V S  ++++ LCK   +D A  L + M   +V PN  T
Sbjct: 327 VNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTIT 386

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           +N+L+DG C +G+I  V +L   M       D  +Y+ LI+  CKN  +++A++L+ ++ 
Sbjct: 387 FNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMI 446

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + I+P + TY  L  GL +  + + A ++F  +       D  TY   I G C
Sbjct: 447 TQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 164/312 (52%), Gaps = 12/312 (3%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           ++GCL +       ++L   +    + PD+YT+SILI+   K G++    ++   ++++ 
Sbjct: 256 IMGCLIE------AVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAY 309

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+VVT+ SL+ G    + +  A  +F  +   G  P V +Y  +I+GLC+T     A+
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAI 369

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +LF+EM + N        PNT+T++ +IDGLCK G +    +L  +M+  +   +V+TY+
Sbjct: 370 SLFEEMKHKN------VIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYS 423

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SLI   C     ++A  L  +M+ Q +QP++ +  ++++ LCK G++  A  +   ++  
Sbjct: 424 SLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIK 483

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
               +  TY  ++ GFC  G  +    L   ME  GC  +  +++I+I    +  E ++A
Sbjct: 484 GYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKA 543

Query: 317 LSLYNELPFKGI 328
             L  E+  +G+
Sbjct: 544 EKLLREMIARGL 555



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ IL+  L K         +F+ L   G   D+ TY+++I+ FCK G       +
Sbjct: 452 PDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++  +   PN +TF  +I  L  +    +A  L  ++ A G
Sbjct: 512 LSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 218/376 (57%), Gaps = 9/376 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
            M   P  + SF IL+ C          LS F ++  +G  P L T+S L++  C   +V
Sbjct: 103 EMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S     F +I +    PNV+ FT+L+ GLC E R+VEA AL  ++   G +PN ITY T+
Sbjct: 163 SEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++G+C+ G T+ ALNL ++M     E+  + KPN V YS IIDGL K+G    A+ LF +
Sbjct: 219 VDGMCKMGDTVSALNLLRKME----EVSRI-KPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+ + ++PN+ TY  +I+GFC +  W+EA+ LL EM ++ + P+VV+ +V++N L K GK
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A  L + M+   + PN  TYN+++DGF    +++  + +F  M + GC  D  +++I
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+GYC  K V++ + L +E+  +G+    +TY TL HG  ++     AL L  EM  + 
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 363 VAADTCTYRTFIDGLC 378
           V  +  T  T +DGLC
Sbjct: 454 VCPNVVTCNTLLDGLC 469



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 205/430 (47%), Gaps = 52/430 (12%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +    P V  ++ ++  L K+       +LF  +   G+ P+L+TY+ +IN FC  G
Sbjct: 238 MEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSG 297

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           + S    +   +     +P+VVTF+ LI  L  E +  EA  L+ ++   G  PN ITYN
Sbjct: 298 RWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYN 357

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+G  +      A  +F  M            P+ +T+SI+IDG C    VD   +L 
Sbjct: 358 SMIDGFSKQNRLDAAERMFYLMATKG------CSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L  N +TYT+LIHGFC   + N A  LL EM+  GV PNVV+ N +++ LC N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 241 GKMDNASRLLDLM---------------VQCDVR-------------------------- 259
           GK+ +A  +  +M               V+ DV+                          
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 260 -----PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+  TYN+++DG C   +++   ++F SM S G   D  ++  LINGYCK   V 
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           + L ++ E+  +GI    +TY TL HG  ++     AL +F EM  + V  DT T R  +
Sbjct: 592 DGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651

Query: 375 DGLCVRPQVR 384
            GL  + +++
Sbjct: 652 TGLWSKEELK 661



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 186/356 (52%), Gaps = 17/356 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F++L+  L K   +     L+  +   G+ P+  TY+ +I+ F K  ++     +
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+V+TF+ LI G C   R+ +   L  ++   G   N ITY TLI+G C+
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G+   AL+L +EM +     GV   PN VT + ++DGLC  G +  A E+F  M+    
Sbjct: 436 LGNLNAALDLLQEMISS----GVC--PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  + ++ P+V TY  LI G  +   ++EA+ L  EM  +G+ P+ ++ N +++ L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      P+  T+ TL++G+C  G++    E+F  M   G   + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
            +Y  LI+G+C+   +  AL ++ E+   G+ P  +T   +  GL+   + +RA++
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 52/288 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+IL+      K  D  + L   ++  GL  +  TY+ LI+ FC++G ++    +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF-----------GCEPNVI 117
              ++ S   PNVVT  +L+ GLC   ++ +A  +F  ++               EP+V 
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYN LI GL   G    A  L++EM +     G+V  P+T+TY+ +IDGLCK+  +D+A 
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHR----GLV--PDTITYNSVIDGLCKQSRLDEAT 559

Query: 178 ELFLQMKYENLNPNVVTYTSL-----------------------------------IHGF 202
           ++F  M  +  +P+VVT+T+L                                   IHGF
Sbjct: 560 QMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           C   + N A  +  EM+  GV P+ ++   ++  L    ++  A + L
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 4/181 (2%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF      ++A  L   MV     P V+    ++  + +  + D    L   M    
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +  N +++  L+  FC   K+      F  +  +G      +++ L++G C    V EAL
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             ++++     KP V+ + TL +GL    +   A+ L   M  + +  +  TY T +DG+
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 378 C 378
           C
Sbjct: 223 C 223


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 220/387 (56%), Gaps = 20/387 (5%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           HMHP PP +  F  LL  +AK KHY TVLSL  +++S G+ P++YT +ILIN FC + +V
Sbjct: 38  HMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV 96

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +  +IL+    P+  TFT+LI+GLC E +I EA  LF K+   G +PNV+TY TL
Sbjct: 97  GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 156

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G+T  A+ L + M  GN +      P+ V Y+ IID LCK+  V +A  LF Q
Sbjct: 157 INGLCKVGNTSAAIRLLRSMEQGNCQ------PDVVIYTSIIDSLCKDRQVTEAFNLFSQ 210

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++P++ TYTSL+H  C+  +W     LL +MV+  + P+VV  + +++ LCK GK
Sbjct: 211 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 270

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  ++D+M+Q  V P+  TY TLMDG CL  +++   ++F  M   G   D  SY  
Sbjct: 271 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 330

Query: 303 LINGYCKNK----EVEEALSLYNELP--FKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
           LIN   K+      ++E + L  E P   KG    V+  +       +++  E+   L  
Sbjct: 331 LINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKD-------KMKLFEKGRTLLN 383

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           EM  + +  +   + T +D LC   +V
Sbjct: 384 EMVNSKIMPNVVIFSTVVDALCKEGKV 410



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 63/317 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+  L         L LF ++   G  P++ TY  LIN  CK+G  S    +
Sbjct: 113 PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+VV +TS+I  LC + ++ EA  LF+++   G  P++ TY +L++ LC 
Sbjct: 173 LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 232

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
                    L  +M N      VV                              +P+ VT
Sbjct: 233 LCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 292

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH-------GFCHAND----- 207
           Y+ ++DG C +  +D+A ++F  M  +   P+V++YT+LI+       G     +     
Sbjct: 293 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLV 352

Query: 208 ----------------------WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                                 + + + LL EMV+  + PNVV  + +++ LCK GK+  
Sbjct: 353 KETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 412

Query: 246 ASRLLDLMVQCDVRPNA 262
           A  ++D+M++  V PNA
Sbjct: 413 AHDVVDMMIKRGVEPNA 429



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 40/254 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K++      +LF ++   G+ PD++TY+ L++  C + +      +
Sbjct: 183 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+VV F++++  LC E ++ EA  +   +   G EP+V+TY TL++G C 
Sbjct: 243 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID----------------GLCKE-- 170
                 A+ +F  M          F P+ ++Y+ +I+                GL KE  
Sbjct: 303 QSEMDEAVKVFDMMVRKG------FAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETP 356

Query: 171 ----------------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                              +K + L  +M    + PNVV +++++   C      EA  +
Sbjct: 357 DAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 416

Query: 215 LIEMVDQGVQPNVV 228
           +  M+ +GV+PN V
Sbjct: 417 VDMMIKRGVEPNAV 430



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F ++ + +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C   ++  A  +L  +++   +P+  T+ TL+ G C+ GKI     LF  M   G
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y  LING CK      A+ L   +     +P VV Y ++   L + RQ   A 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M G  ++ D  TY + +  LC
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALC 231



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  ++A      ++     P++V    ++  +    KM + S +L L  Q D   V P
Sbjct: 22  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPP 78

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N +T N L++ FC   ++     +   +  +G + D  ++  LI G C   ++ EAL L+
Sbjct: 79  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 138

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +++  +G +P VVTY TL +GL ++     A++L   M+  +   D   Y + ID LC  
Sbjct: 139 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 198

Query: 381 PQV 383
            QV
Sbjct: 199 RQV 201


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+     +A+ K ++ VL   K+L   G+  ++YT +I+INCFC+  +    + +
Sbjct: 76  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+  TF +LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T +AL+L ++M   N       K +  TYS IID LC++G +D A  LF +M+ + +
Sbjct: 196 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 249

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY SL+ G C A  WN+   LL +MV + + PNV++ NV+++   K GK+  A+ 
Sbjct: 250 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN  TYNTLMDG+C+  +++    +   M    C  D  ++  LI GYC
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K V++ + ++  +  +G+    VTY+ L  G  +  + + A +LF EM  + V  D  
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429

Query: 369 TYRTFIDGLC 378
           TY   +DGLC
Sbjct: 430 TYGILLDGLC 439



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +++ ++  L ++   D  +SLFK + + G+   + TY+ L+   CK G+ + G ++  
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PNV+TF  L+     E ++ EA  L+ ++   G  PN+ITYNTL++G C   
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 337

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A N+   M            P+ VT++ +I G C    VD   ++F  +    L  
Sbjct: 338 RLSEANNMLDLMVRNK------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTY+ L+ GFC +     A+ L  EMV  GV P+V++  ++++ LC NGK++ A  + 
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + + +  +      Y T+++G C  GK+     LF S+   G K +  +Y ++I+G CK 
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L  ++   G  P   TYNTL            + KL  EM+    +AD  + 
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571

Query: 371 RTFIDGL 377
           +  ID L
Sbjct: 572 KMVIDML 578



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 38/352 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++ ILL  L  N   +  L +F+ L    +   +  Y+ +I   CK G+V  
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      PNV+T+T +I GLC +  + EA  L  K++  G  PN  TYNTLI 
Sbjct: 482 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL-----------CKEGFV 173
              R G    +  L +EM +        F  +  +  ++ID L           C     
Sbjct: 542 AHLRDGDLTASAKLIEEMKSCG------FSADASSIKMVIDMLLSAMKRLTLRYCLSKGS 595

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN----EAKGLLIEMVDQGVQPNVVS 229
              ++L      E +  + +T+  +          N    EA+G+    +++ ++    S
Sbjct: 596 KSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRS 655

Query: 230 S-----------NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK- 277
           S            ++ NEL   G  D      DLMV  ++  +A  Y          G+ 
Sbjct: 656 SVLKKFKNRDVRVLVTNELLTWGLEDAEC---DLMVDLELPTDAVHYAHRAGRMRRPGRK 712

Query: 278 --INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
             +   +EL   M   G   +  +Y+ LI+G+CK   ++EA  + + +  KG
Sbjct: 713 MTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 4/157 (2%)

Query: 226 NVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           ++ + NV   E  ++G    K D+A  L   M++    P+   ++        T + N V
Sbjct: 38  SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 97

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            +    +E  G  H+ ++ NI+IN +C+  +   A S+  ++   G +P   T+NTL  G
Sbjct: 98  LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 157

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           LF   +   A+ L   M  N    D  TY + ++G+C
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+     +A+ K ++ VL   K+L   G+  ++YT +I+INCFC+  +    + +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+  TF +LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T +AL+L ++M   N       K +  TYS IID LC++G +D A  LF +M+ + +
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY SL+ G C A  WN+   LL +MV + + PNV++ NV+++   K GK+  A+ 
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN  TYNTLMDG+C+  +++    +   M    C  D  ++  LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K V++ + ++  +  +G+    VTY+ L  G  +  + + A +LF EM  + V  D  
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 369 TYRTFIDGLC 378
           TY   +DGLC
Sbjct: 440 TYGILLDGLC 449



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 7/389 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +++ ++  L ++   D  +SLFK + + G+   + TY+ L+   CK G+ + G ++  
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PNV+TF  L+     E ++ EA  L+ ++   G  PN+ITYNTL++G C   
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A N+   M            P+ VT++ +I G C    VD   ++F  +    L  
Sbjct: 348 RLSEANNMLDLMVRNKCS------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTY+ L+ GFC +     A+ L  EMV  GV P+V++  ++++ LC NGK++ A  + 
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + + +  +      Y T+++G C  GK+     LF S+   G K +  +Y ++I+G CK 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L  ++   G  P   TYNTL            + KL  EM+    +AD  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 371 RTFIDG-LCVRPQVRFTYARRKGNSGNTN 398
           +  ID  L    ++   Y   KG+    +
Sbjct: 582 KMVIDMLLSAMKRLTLRYCLSKGSKSRQD 610



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 6/163 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++ ILL  L  N   +  L +F+ L    +   +  Y+ +I   CK G+V  
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      PNV+T+T +I GLC +  + EA  L  K++  G  PN  TYNTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              R G    +  L +EM +        F  +  +  ++ID L
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCG------FSADASSIKMVIDML 588



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)

Query: 225 PNVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            ++ + NV   E  ++G    K D+A  L   M++    P+   ++        T + N 
Sbjct: 47  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL 106

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           V +    +E  G  H+ ++ NI+IN +C+  +   A S+  ++   G +P   T+NTL  
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GLF   +   A+ L   M  N    D  TY + ++G+C
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+     +A+ K ++ VL   K+L   G+  ++YT +I+INCFC+  +    + +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+  TF +LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T +AL+L ++M   N       K +  TYS IID LC++G +D A  LF +M+ + +
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY SL+ G C A  WN+   LL +MV + + PNV++ NV+++   K GK+  A+ 
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN  TYNTLMDG+C+  +++    +   M    C  D  ++  LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K V++ + ++  +  +G+    VTY+ L  G  +  + + A +LF EM  + V  D  
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 369 TYRTFIDGLC 378
           TY   +DGLC
Sbjct: 440 TYGILLDGLC 449



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +R M        V +++ ++  L ++   D  +SLFK + + G+   + TY+ L+   CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+ + G ++   ++     PNV+TF  L+     E ++ EA  L+ ++   G  PN+IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YNTL++G C       A N+   M            P+ VT++ +I G C    VD   +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCS------PDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  +    L  N VTY+ L+ GFC +     A+ L  EMV  GV P+V++  ++++ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            NGK++ A  + + + +  +      Y T+++G C  GK+     LF S+   G K +  
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y ++I+G CK   + EA  L  ++   G  P   TYNTL            + KL  EM
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +    +AD  + +  ID L
Sbjct: 570 KSCGFSADASSIKMVIDML 588



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++ ILL  L  N   +  L +F+ L    +   +  Y+ +I   CK G+V  
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      PNV+T+T +I GLC +  + EA  L  K++  G  PN  TYNTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
              R G    +  L +EM +        F  +  +  ++ID L   G +DK+   FL M
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCG------FSADASSIKMVIDMLL-SGELDKS---FLDM 600



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)

Query: 225 PNVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            ++ + NV   E  ++G    K D+A  L   M++    P+   ++        T + N 
Sbjct: 47  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL 106

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           V +    +E  G  H+ ++ NI+IN +C+  +   A S+  ++   G +P   T+NTL  
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GLF   +   A+ L   M  N    D  TY + ++G+C
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 216/379 (56%), Gaps = 8/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKM 59
           M  M+P P  V  F +LLG + K KHY T +SL K ++S +G+ PD +  +++IN  C +
Sbjct: 66  MAKMNPLPS-VIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHL 124

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
             V+ GF + G +L+    P+VVTFT LI GLC +  +  A  L   ++  G   +V TY
Sbjct: 125 KLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTY 184

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             LINGLC+ G T  A+   ++M   N      + PN V YS ++DGLCK+G V +A  L
Sbjct: 185 GVLINGLCKMGKTSEAVGWLRKMEERN------WNPNVVVYSTVMDGLCKDGLVSEALGL 238

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
            L+M  + + PN+VTYT LI G C+   W EA  LL EM+  GV P++ S N++++ LCK
Sbjct: 239 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A  ++  M+     P+ FTYN+L+D +CL  +++    +F  M S GC  D  +
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 358

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y  LI+G+CK K + +A+ L +E+   G  P VVT+ TL  G  ++ +   A +LF+ M 
Sbjct: 359 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH 418

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 +  T    +DGLC
Sbjct: 419 KYGQVPNLQTCAIILDGLC 437



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 197/426 (46%), Gaps = 46/426 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F IL+  L         + L   +   G   D+ TY +LIN  CKMG+ S     
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGW 203

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++    + PNVV +++++ GLC +  + EA  L  ++   G +PN++TY  LI GLC 
Sbjct: 204 LRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCN 263

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV--------------- 173
            G    A +L  EM     ++GV+  P+  + +I++D LCKEG +               
Sbjct: 264 FGRWKEAGSLLDEMM----KMGVM--PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGE 317

Query: 174 --------------------DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                               D+A  +F  M      P++V YTSLIHG+C   + N+A  
Sbjct: 318 VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+  G  P+VV+   ++   C+ G+   A  L   M +    PN  T   ++DG C
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +  ++    LF +ME      +   Y+I+++G C   ++  AL L++ LP KG++  V 
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVY 497

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
            Y  + +G  +    ++A  L   M+ N    D+CTY  F+ GL    ++       T  
Sbjct: 498 AYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMM 557

Query: 389 RRKGNS 394
           R KG S
Sbjct: 558 RDKGFS 563



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+      L L   ++  G+ P+L TY+ LI   C  G+      +
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P++ +   L+  LC E +I++A ++   +   G  P+V TYN+LI+  C 
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M +          P+ V Y+ +I G CK   ++KA  L  +M     
Sbjct: 334 QNQMDEATRVFELMVSRG------CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+T+LI GFC       AK L + M   G  PN+ +  +I++ LCK+  +  A  
Sbjct: 388 TPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALS 447

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M + ++  N   Y+ ++DG C  GK+N   ELF  + + G + + ++Y I+ING+ 
Sbjct: 448 LFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFA 507

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +++A  L + +   G  P   TYN    GL   R+  R++K    M+    + D  
Sbjct: 508 KQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDAT 567

Query: 369 TYRTFIDGL 377
           T    I+ L
Sbjct: 568 TTEMIINYL 576



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 6/303 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S NIL+  L K        S+   +  +G  PD++TY+ LI+ +C   Q+     +
Sbjct: 284 PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++V +TSLI G C    I +A  L  ++   G  P+V+T+ TLI G C+
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQ 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  LF  M +  G++     PN  T +II+DGLCK   + +A  LF  M+  NL
Sbjct: 404 VGRPLAAKELFLNM-HKYGQV-----PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+V Y+ ++ G C A   N A  L   +  +G+Q NV +  +++N   K G +D A  
Sbjct: 458 DLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAED 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    P++ TYN  + G     +I R  +    M   G   D  +  ++IN   
Sbjct: 518 LLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLS 577

Query: 309 KNK 311
            N+
Sbjct: 578 TNQ 580



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 163/367 (44%), Gaps = 68/367 (18%)

Query: 80  NVVTFTSLIKGLCAESR---IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           N   F + ++  C   +   I EA   F  +      P+VI +  L+  + +  H   A+
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95

Query: 137 NLFKEMTN--------------------------GNGEIGVVFK----PNTVTYSIIIDG 166
           +L KEM +                          G   +G + K    P+ VT++I+I+G
Sbjct: 96  SLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILING 155

Query: 167 LCKEGFVDKAKEL-----------------------------------FLQMKYENLNPN 191
           LC +G V +A EL                                     +M+  N NPN
Sbjct: 156 LCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPN 215

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV Y++++ G C     +EA GL +EM  +G++PN+V+   ++  LC  G+   A  LLD
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLD 275

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M++  V P+  + N L+D  C  GKI + K +   M  +G   D F+YN LI+ YC   
Sbjct: 276 EMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQN 335

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +++EA  ++  +  +G  P +V Y +L HG  +I+   +A+ L  EM       D  T+ 
Sbjct: 336 QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT 395

Query: 372 TFIDGLC 378
           T I G C
Sbjct: 396 TLIGGFC 402



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   P + +  I+L  L K++     LSLF  +    L  ++  YSI+++  C  G++
Sbjct: 418 HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKL 477

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       NV  +T +I G   +  + +A  L + ++  GC P+  TYN  
Sbjct: 478 NTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVF 537

Query: 123 INGL 126
           + GL
Sbjct: 538 VQGL 541


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 222/413 (53%), Gaps = 42/413 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    P P P+  FN L   +A+ K YD VL   K +   G+  D+YT +I+INC+C+  
Sbjct: 61  MIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK 119

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F + GR  +  + P+ +TF++L+ G C E R+ EA AL  ++      P+++T +
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179

Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
           TLINGLC                                   ++G++ +AL+LF++M   
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
           N       K + V YSI+ID LCK+G  D A  LF +M+ + +  +VVTY+SLI G C+ 
Sbjct: 240 N------IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             W++   +L EM+ + + P+VV+ + +++   K GK+  A  L + M+   + P+  TY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N+L+DGFC    ++   ++F  M S GC+ D  +Y+ILIN YCK K V++ + L+ E+  
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KG+ P  +TYNTL  G  +  +   A +LF EM    V     TY   +DGLC
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  V+   ++ G   K +  +  L L  R+   G  PD  TY  ++N  CK G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEA-LVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             +L   +F ++       +VV ++ +I  LC +    +A +LF +++  G + +V+TY+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI GLC  G       + +EM      IG    P+ VT+S +ID   KEG + +AKEL+
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREM------IGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+ +TY SLI GFC  N  +EA  +   MV +G +P++V+ ++++N  CK 
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++D+  RL   +    + PN  TYNTL+ GFC +GK+N  KELF  M S G      +Y
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL++G C N E+ +AL ++ ++    +   +  YN + HG+    + + A  LF  +  
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518

Query: 361 NDVAADTCTYRTFIDGLC 378
             V  D  TY   I GLC
Sbjct: 519 KGVKPDVVTYNVMIGGLC 536



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++I++  L K+  +D  LSLF  +   G+  D+ TYS LI   C  G+   G  +  
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+VVTF++LI     E +++EA  L+ ++   G  P+ ITYN+LI+G C+  
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +F  M +   E      P+ VTYSI+I+  CK   VD    LF ++  + L P
Sbjct: 365 CLHEANQMFDLMVSKGCE------PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N +TY +L+ GFC +   N AK L  EMV +GV P+VV+  ++++ LC NG+++ A  + 
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  +      YN ++ G C   K++    LF S+   G K D  +YN++I G CK 
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L+ ++   G  P   TYN L            +++L  EM+    +AD+ T 
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598

Query: 371 RTFIDGLCVR 380
           +  ID L  R
Sbjct: 599 KMVIDMLSDR 608



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V+ A +LF  M      P  + +  L         ++   G    M   G++ ++ +  +
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  K+  A  +L    +    P+  T++TL++GFCL G+++    L   M  M 
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  + + LING C    V EAL L + +   G +P  VTY  + + L +   +  AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M+  ++ A    Y   ID LC
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLC 256



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 41/211 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++IL+    K K  D  + LF+ ++S GL P+  TY+ L+  FC+ G+++    +
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
           F  ++     P+VVT+  L+ GLC                                    
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
            S++ +A +LF  L   G +P+V+TYN +I GLC+ G    A  LF++M     E G   
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK----EDGCT- 557

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            P+  TY+I+I        +  + EL  +MK
Sbjct: 558 -PDDFTYNILIRAHLGGSGLISSVELIEEMK 587



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++ ILL  L  N   +  L +F+++    +   +  Y+I+I+  C   +V   + 
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VVT+  +I GLC +  + EA  LF K+K  GC P+  TYN LI    
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
                I ++ L +EM          F  ++ T  ++ID L
Sbjct: 572 GGSGLISSVELIEEMKVCG------FSADSSTIKMVIDML 605



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 226 NVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           ++  + +   E  +NG    K+++A  L + M+Q    P    +N L      T + + V
Sbjct: 30  SITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLV 89

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                 ME  G +HD ++  I+IN YC+ K++  A S+       G +P  +T++TL +G
Sbjct: 90  LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                +   A+ L   M       D  T  T I+GLC++ +V
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 215/372 (57%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSL--FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P +  FN LL  +AK K +D V+SL    ++  +G  P + T S L+N +C   ++S   
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  +++   + P+ +TFT+LI GL   ++  EA AL  ++   GC+PN++TY  ++NGL
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G   +A NL  +M     E  VV       ++ IID LCK   VD A  LF +M+ +
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVI------FNTIIDSLCKYRHVDDALNLFKEMETK 213

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTY+SLI   C    W++A  LL +M+++ + PN+V+ N +++   K GK   A
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L D M++  + P+ FTYN+L++GFC+  ++++ K++F  M S  C  D  +YN LI G
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK+K VE+   L+ E+  +G+    VTY TL  GLF     + A K+F +M  + V  D
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393

Query: 367 TCTYRTFIDGLC 378
             TY   +DGLC
Sbjct: 394 IMTYSILLDGLC 405



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 6/356 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L K +H D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +   ++
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+VTF +LI     E + VEA  L   +     +P++ TYN+LING C      
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M + +      F P+  TY+ +I G CK   V+   ELF +M +  L  + V
Sbjct: 307 KAKQMFEFMVSKD-----CF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LI G  H  D + A+ +  +MV  GV P++++ +++++ LC NGK++ A  + D M
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + +++ + + Y T+++G C  GK++   +LF S+   G K +  +YN +I+G C  + +
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +EA +L  ++   G  P   TYNTL            + +L  EM+      D  T
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 536



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 42/409 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  ++   ++ G    NK  + V +L  R+   G  P+L TY +++N  CK G
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            + L F +  ++  +    +VV F ++I  LC    + +A  LF +++  G  PNV+TY+
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+ LC  G    A  L  +M            PN VT++ +ID   KEG   +A++L 
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKK------INPNLVTFNALIDAFVKEGKFVEAEKLH 277

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK- 239
             M   +++P++ TY SLI+GFC  +  ++AK +   MV +   P++ + N ++   CK 
Sbjct: 278 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 337

Query: 240 ----------------------------------NGKMDNASRLLDLMVQCDVRPNAFTY 265
                                             +G  DNA ++   MV   V P+  TY
Sbjct: 338 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 397

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           + L+DG C  GK+ +  E+F  M+    K D + Y  +I G CK  +V++   L+  L  
Sbjct: 398 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 457

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           KG+KP VVTYNT+  GL   R  + A  L  +M+ +    D+ TY T I
Sbjct: 458 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 8/290 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH--TIVALNLFKEMTNGNGEIGVVF 153
           ++ +A  LF  +      P++  +N L++ + +      +++L L  +M      + + +
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKM------MKLGY 75

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P+ VT S +++G C    +  A  L  QM      P+ +T+T+LIHG    N  +EA  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+  MV +G QPN+V+  V++N LCK G +D A  LL+ M    +  +   +NT++D  C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               ++    LF  ME+ G + +  +Y+ LI+  C      +A  L +++  K I P +V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           T+N L     +  +   A KL  +M    +  D  TY + I+G C+  ++
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 72/135 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ILL  L  N   +  L +F  +    +  D+Y Y+ +I   CK G+V  G+ 
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PNVVT+ ++I GLC++  + EA AL  K+K  G  P+  TYNTLI    
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 128 RTGHTIVALNLFKEM 142
           R G    +  L +EM
Sbjct: 511 RDGDKAASAELIREM 525



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV--SMESMGCKHD 296
           K+ K+D+A  L   MV+    P+ F +N L+       K + V  L +   M  +G +  
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             + + L+NGYC  K + +A++L +++   G +P  +T+ TL HGLF   +A  A+ L  
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            M       +  TY   ++GLC R  +   +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 169


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 222/413 (53%), Gaps = 42/413 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    P P P+  FN L   +A+ K YD VL   K +   G+  D+YT +I+INC+C+  
Sbjct: 90  MIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK 148

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F + GR  +  + P+ +TF++L+ G C E R+ EA AL  ++      P+++T +
Sbjct: 149 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 208

Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
           TLINGLC                                   ++G++ +AL+LF++M   
Sbjct: 209 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 268

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
           N       K + V YSI+ID LCK+G  D A  LF +M+ + +  +VVTY+SLI G C+ 
Sbjct: 269 N------IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             W++   +L EM+ + + P+VV+ + +++   K GK+  A  L + M+   + P+  TY
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 382

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N+L+DGFC    ++   ++F  M S GC+ D  +Y+ILIN YCK K V++ + L+ E+  
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 442

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KG+ P  +TYNTL  G  +  +   A +LF EM    V     TY   +DGLC
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 197/380 (51%), Gaps = 7/380 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  V+   ++ G   K +     L L  R+   G  PD  TY  ++N  CK G
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 253

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             +L   +F ++       +VV ++ +I  LC +    +A +LF +++  G + +V+TY+
Sbjct: 254 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 313

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI GLC  G       + +EM      IG    P+ VT+S +ID   KEG + +AKEL+
Sbjct: 314 SLIGGLCNDGKWDDGAKMLREM------IGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 367

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + P+ +TY SLI GFC  N  +EA  +   MV +G +P++V+ ++++N  CK 
Sbjct: 368 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 427

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++D+  RL   +    + PN  TYNTL+ GFC +GK+N  KELF  M S G      +Y
Sbjct: 428 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL++G C N E+ +AL ++ ++    +   +  YN + HG+    + + A  LF  +  
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547

Query: 361 NDVAADTCTYRTFIDGLCVR 380
             V  D  TY   I GLC +
Sbjct: 548 KGVKPDVVTYNVMIGGLCKK 567



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++I++  L K+  +D  LSLF  +   G+  D+ TYS LI   C  G+   G  +  
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+VVTF++LI     E +++EA  L+ ++   G  P+ ITYN+LI+G C+  
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +F  M +   E      P+ VTYSI+I+  CK   VD    LF ++  + L P
Sbjct: 394 CLHEANQMFDLMVSKGCE------PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 447

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N +TY +L+ GFC +   N AK L  EMV +GV P+VV+  ++++ LC NG+++ A  + 
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  +      YN ++ G C   K++    LF S+   G K D  +YN++I G CK 
Sbjct: 508 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L+ ++   G  P   TYN L            +++L  EM+    +AD+ T 
Sbjct: 568 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 627

Query: 371 RTFIDGLCVR 380
           +  ID L  R
Sbjct: 628 KMVIDMLSDR 637



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V+ A +LF  M      P  + +  L         ++   G    M   G++ ++ +  +
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  K+  A  +L    +    P+  T++TL++GFCL G+++    L   M  M 
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  + + LING C    V EAL L + +   G +P  VTY  + + L +   +  AL
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF +M+  ++ A    Y   ID LC
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLC 285



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 41/211 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++IL+    K K  D  + LF+ ++S GL P+  TY+ L+  FC+ G+++    +
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 471

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
           F  ++     P+VVT+  L+ GLC                                    
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
            S++ +A +LF  L   G +P+V+TYN +I GLC+ G    A  LF++M     E G   
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK----EDGCT- 586

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            P+  TY+I+I        +  + EL  +MK
Sbjct: 587 -PDDFTYNILIRAHLGGSGLISSVELIEEMK 616



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++ ILL  L  N   +  L +F+++    +   +  Y+I+I+  C   +V   + 
Sbjct: 481 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 540

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VVT+  +I GLC +  + EA  LF K+K  GC P+  TYN LI    
Sbjct: 541 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 600

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
                I ++ L +EM          F  ++ T  ++ID L
Sbjct: 601 GGSGLISSVELIEEMKVCG------FSADSSTIKMVIDML 634



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 226 NVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           ++  + +   E  +NG    K+++A  L + M+Q    P    +N L      T + + V
Sbjct: 59  SITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLV 118

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                 ME  G +HD ++  I+IN YC+ K++  A S+       G +P  +T++TL +G
Sbjct: 119 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 178

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                +   A+ L   M       D  T  T I+GLC++ +V
Sbjct: 179 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 220


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 141/383 (36%), Positives = 218/383 (56%), Gaps = 28/383 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H     PP+  F  +LG L K   Y T +SL +++   G+  +L T +ILINCF ++G
Sbjct: 50  LLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLG 109

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q  L F +F  IL+  + PNV+T T+LIKGLC +                      ++Y 
Sbjct: 110 QNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------------------VSYG 147

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G    AL L + +       G + +PN V Y+ IID +CK   V++A +L+
Sbjct: 148 TLINGLCKVGQARAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 201

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  E ++P+VVTY++LI GF       +A  L  +M+ + ++P+V + N++++  CK+
Sbjct: 202 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 261

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GKM     +  +M++  ++PN  TY +LMDG+CL  ++N+   +F +M   G   D  SY
Sbjct: 262 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSY 321

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NI+ING+CK K+V+EA++L+ ++  K I P VVTY +L  GL +  +   ALKL  EM  
Sbjct: 322 NIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHD 381

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
             V  D  TY + +D LC   QV
Sbjct: 382 RGVPPDIITYSSILDALCKNHQV 404



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 174/329 (52%), Gaps = 16/329 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K K  +    L+  + S G+ PD+ TYS LI+ F  +G++     +
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+V TF  L+ G C + ++ E   +F  +   G +PNV+TY +L++G C 
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M  G    GV   P+T +Y+I+I+G CK   VD+A  LF +M  +N+
Sbjct: 296 VKQVNKANSIFNTMAQG----GV--NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTYTSLI G C +   + A  L+ EM D+GV P++++ + I++ LCKN ++D A  
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 249 LL---------DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           LL         DL V+     + + Y  ++ GFC+ G  N    L   ME  G   D  +
Sbjct: 410 LLTKLKDQVFEDLFVK-GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGI 328
           Y I+I    K  E + A  L  E+  +G+
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 142/285 (49%), Gaps = 38/285 (13%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  V+   ++ G     K  D +  LF ++    + PD+YT++IL++ FCK G++  G 
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAI-DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +++    PNVVT+ SL+ G C   ++ +A ++F  +   G  P+  +YN +ING 
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328

Query: 127 CRTGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNT 157
           C+      A+NLFK+M   N                  G+I    K           P+ 
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMK---YENL-----NPNVVTYTSLIHGFCHANDWN 209
           +TYS I+D LCK   VDKA  L  ++K   +E+L     N +V  YT +I GFC    +N
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           EA  LL +M D G  P+  +  +I+  L K  + D A +LL  M+
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMI 493



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 27/140 (19%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + +++ +L  L KN   D  ++L  +L    +F DL+               
Sbjct: 380 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD-QVFEDLFVKG------------ 426

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                         +  +V  +T +I+G C +    EA AL +K++  G  P+  TY  +
Sbjct: 427 --------------YNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEII 472

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L +     +A  L +EM
Sbjct: 473 ILSLFKKDENDMAEKLLREM 492


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 217/384 (56%), Gaps = 22/384 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNK-HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           MR +  +P  V  FN +L  L K K HY TVLSL  ++ S G+ PDL+T SILINC+C +
Sbjct: 57  MRQIRQTPSIVE-FNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHL 115

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           GQ++  F +F +IL+               GLC   ++ EA      + A G   N +TY
Sbjct: 116 GQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALGFHLNHVTY 161

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             LINGLC+ G T  AL + +++       G +   N V YS IIDGLCK+  V  A  L
Sbjct: 162 GILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTIIDGLCKDKLVTDAYGL 215

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           + +M  + + P VVT++SLI+GFC    + +A  L  EMV + + P+  + N++++ LCK
Sbjct: 216 YSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK 275

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A  ++ +M++  V P   TYNTLMDG+CL  ++ + K +   +  M    +  S
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRS 335

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YNI+ING+CK K V+EAL L++E+  +GI P  VTYN+L  GL +  +   A +L  EM 
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395

Query: 360 GNDVAADTCTYRTFIDGLCVRPQV 383
            N + AD  TY + ID  C    V
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHV 419



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ ++  L K+K       L+  +    + P + T+S LI  FC +G+    F +F 
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC--- 127
            ++     P+  TF  L+  LC E +I EA  +   +   G EP V+TYNTL++G C   
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G     L++   M            PN+ +Y+I+I+G CK   VD+A  LF +M    
Sbjct: 313 EVGKAKHVLSIISRMR---------VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRG 363

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ VTY SLI G C A     A  L+ EM +  +  ++V+ N +++  CKN  +D A 
Sbjct: 364 IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAI 423

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+  + +  ++PN  TYN L+DG C  G++   +++F  +   G   + ++YNI+ING 
Sbjct: 424 ALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           CK    +EA  L +++   GI P  VTY T+   LF   + E+A KL  EM
Sbjct: 484 CKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 16/340 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +F+ L+        +     LF  +    + PD YT++IL++  CK G++     
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +++    P VVT+ +L+ G C  + + +A  + + +      PN  +YN +ING C
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      AL LF EM            P+ VTY+ +IDGLCK G +  A EL  +M    
Sbjct: 345 KIKMVDEALCLFHEMCCRG------IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  ++VTY SLI  FC     ++A  L+ ++ + G+QPN+ + N++++ LCK G++ NA 
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQ 458

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   ++      NA+TYN +++G C  G  +  + L   ME  G   D  +Y  +I   
Sbjct: 459 DVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
               E E+A  L  E+  KG    VV Y       FEIR+
Sbjct: 519 FHKDENEKAQKLLREMVIKG----VVVY------AFEIRR 548



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 149/287 (51%), Gaps = 18/287 (6%)

Query: 9   PPVSSFNILLG--CL----AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V ++N L+   CL     K KH   VLS+  R+    + P+  +Y+I+IN FCK+  V
Sbjct: 296 PTVVTYNTLMDGYCLVNEVGKAKH---VLSIISRMR---VAPNSRSYNIMINGFCKIKMV 349

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +     AP+ VT+ SLI GLC   RI  A  L  ++       +++TYN+L
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+  C+  H   A+ L K++     E G+  +PN  TY+I+IDGLCK G +  A+++F  
Sbjct: 410 IDVFCKNQHVDKAIALVKKIK----EHGI--QPNMCTYNILIDGLCKGGQLKNAQDVFQD 463

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +  +  N N  TY  +I+G C    ++EA+ LL +M D G+ P+ V+   I+  L    +
Sbjct: 464 LLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDE 523

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            + A +LL  MV   V   AF     + G  L   +N +  LF ++E
Sbjct: 524 NEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGMNLISLLFSALE 570


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 202/337 (59%), Gaps = 8/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQ--VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA 101
           PD+YT +ILINCFC          F + G + +    PN VTF++L+ GL ++++I++A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
            LF ++   G EP+VITY+T+INGLC+ G T +A+ L K+M     E G   KPN V YS
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKME----EKGC--KPNVVVYS 121

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            IID LCK+  + +A E   +M    ++PNVVTY+S++HGFC+    NEA  L  +MV++
Sbjct: 122 TIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER 181

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            V P+ V+ N++++ L K G +  A  + + M++  V PN  TYN LMDG+C   +++  
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           ++LF  M   GC     SYNILI G+CK+  ++EA  L  E+  K + P  VTY+TL  G
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +  + + A KL  EM+   +  D  TY   +DGLC
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ LL  L+        + LF  +  +G  PD+ TYS +IN  CKMG  ++   +
Sbjct: 45  PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL 104

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVV ++++I  LC +  I EA    +++   G  PNV+TY+++++G C 
Sbjct: 105 LKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G +  A +LFK+M   N        P+TVT++I++DGL KEG + +A+ +F  M  + +
Sbjct: 165 LGRSNEATSLFKQMVERN------VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY +L+ G+C  +  +EA+ L   MV +G  P+V S N+++   CK+G++D A  
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKG 278

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    + P+  TY+TLM GFC  G+    ++L   M S G   D  +Y+I+++G C
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L   +    I+P +  Y  L  G+    + E A +LF  +    +  D  
Sbjct: 339 KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV 398

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 399 TYTVMISGL 407



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+K     +     + + G+ P++ TYS +++ FC +G+ +    +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+ VTF  L+ GL  E  I+EA  +F  +   G EPNV TYN L++G C 
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  M            P+  +Y+I+I G CK G +D+AK L  +M ++ L
Sbjct: 235 QSQMDEAQKLFNIMVRKG------CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++L+ GFC      +A+ LL EM   G+ P++++ +++++ LCK G +D A  
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + PN F Y  L+ G C  GK+   +ELF ++   G + D  +Y ++I+G  
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  L+ ++   G  P   TYN +  G         A +L  EM G   +AD+ 
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468

Query: 369 TYRTFID 375
           T++   D
Sbjct: 469 TFQMLSD 475



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 118/223 (52%), Gaps = 7/223 (3%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHAN--DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           M   N+ P+V T T LI+ FCH+N   ++ A  +L  M   G+QPN V+ + ++N L   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            K+ +A +L D MV+    P+  TY+T+++G C  G      +L   ME  GCK +   Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + +I+  CK+K + EA+   +E+  +GI P VVTY+++ HG   + ++  A  LF +M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 361 NDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGNTN 398
            +V  DT T+   +DGL      +  Q  F     KG   N N
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 7/247 (2%)

Query: 153 FKPNTVTYSIIIDGLCK--EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            +P+  T +I+I+  C         A  +   M    L PN VT+++L++G        +
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  EMV  G +P+V++ + I+N LCK G    A +LL  M +   +PN   Y+T++D
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C    I    E    M + G   +  +Y+ +++G+C      EA SL+ ++  + + P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----F 385
             VT+N L  GL +      A  +F  M    V  +  TY   +DG C + Q+      F
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 386 TYARRKG 392
               RKG
Sbjct: 246 NIMVRKG 252


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 223/367 (60%), Gaps = 7/367 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           +P+PP +  FN +LG L K+KHY TVL L K++   G+ P+L   +ILINCFC++G +  
Sbjct: 82  NPTPPAIE-FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPF 140

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +F +IL+  + PN +TFT+LIKGLC + +I +A     KL A G + N I+Y TLI+
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G T  AL+L + +       G + +PN V YS IIDG+CK+  V+ A +L+ +M 
Sbjct: 201 GLCKVGETRAALDLLRRVD------GKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + ++PNVVTY++LI GF       +A  L  +M+ + ++P+V + N++++  CK+GK+ 
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +L+D M      PN  TY++++D  C T ++++   L   ++  G + +  +Y ILI
Sbjct: 315 YALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILI 374

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G C + ++E+A +++ +L  KG   TVVTY  +F+G  +    + A  L  +M+ N   
Sbjct: 375 DGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434

Query: 365 ADTCTYR 371
            D  TY 
Sbjct: 435 PDAKTYE 441



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 181/374 (48%), Gaps = 18/374 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P    SF  L     KN H++ +     ++N       L  YS     F     V  
Sbjct: 23  HFVPKKFPSFQFL-----KNTHFNFIPCSSSKIN-------LIPYSSTSTTFHSNNDVDD 70

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +LR    P  + F  ++  L           L  K++  G +PN++  N LIN
Sbjct: 71  AVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILIN 130

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             C+ G    A ++F ++      + + + PNT+T++ +I GLC +G + +A     ++ 
Sbjct: 131 CFCQLGLIPFAFSVFAKI------LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLV 184

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                 N ++Y +LI G C   +   A  LL  +  + VQPNVV  + I++ +CK+  ++
Sbjct: 185 ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  L   MV   + PN  TY+ L+ GF   GK+    +LF  M S   K D +++NIL+
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + +CK+ ++  AL L +E+  +G  P +VTY+++   L +  + ++A+ L  +++   + 
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIR 364

Query: 365 ADTCTYRTFIDGLC 378
            +  TY   IDGLC
Sbjct: 365 PNMHTYTILIDGLC 378



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 112/232 (48%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + ++ I+  L K         L  +M++  + PN+V    LI+ FC       A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +++  G  PN ++   ++  LC  G++  A    D +V    + N  +Y TL+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+     +L   ++    + +   Y+ +I+G CK+K V +A  LY+E+  KGI P VVT
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           Y+ L  G F + + + A+ LF +M   ++  D  T+   +D  C   ++ + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYA 316



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + +++ +L  L K    D  ++L  +L   G+ P+++TY+ILI+  C  G++
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKL 383

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                IF  +L   +   VVT+  +  G C +    EA+AL +K++  GC P+  TY  +
Sbjct: 384 EDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443

Query: 123 INGLCRTGHTIVALNLFKE 141
              L + G   +A  L +E
Sbjct: 444 KLSLFKKGENDMAEKLHRE 462


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 213/370 (57%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+     +A+ K ++ VL   K+L   G+  ++YT +I+INCFC+  +    + +
Sbjct: 86  PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+  TF +LI GLC E ++ +A  L  ++   GC+P+++TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR 205

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T +A ++ ++M   N       K +  TYS IID LC++G +D A  LF +M+ + +
Sbjct: 206 SGDTSLAFDMLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY SL+ G C A  WN+   LL +MV + + PNV++ NV+++   K GK+  A+ 
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN  TYNTLMDG+C+  +++    +   M    C  D  ++  LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K V++ + ++  +  +G+    VTY+ L  G  +  + + A +LF EM  + V  D  
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 369 TYRTFIDGLC 378
           TY   +DGLC
Sbjct: 440 TYGILLDGLC 449



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +R M        V +++ ++  L ++   D  +SLFK + + G+   + TY+ L+   CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+ + G ++   ++     PNV+TF  L+     E ++ EA  L+ ++   G  PN+IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YNTL++G C       A N+   M            P+ VT++ +I G C    VD   +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCS------PDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  +    L  N VTY+ L+ GFC +     A+ L  EMV  GV P+V++  ++++ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            NGK++ A  + + + +  +      Y T+++G C  GK+     LF S+   G K +  
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y ++I+G CK   + EA  L  ++   G  P   TYNTL            + KL  EM
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +    +AD  + +  ID L
Sbjct: 570 KSCGFSADASSIKMVIDML 588



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++ ILL  L  N   +  L +F+ L    +   +  Y+ +I   CK G+V  
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      PNV+T+T +I GLC +  + EA  L  K++  G  PN  TYNTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
              R G    +  L +EM +        F  +  +  ++ID L   G +DK+   FL M
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCG------FSADASSIKMVIDMLL-SGELDKS---FLDM 600



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)

Query: 225 PNVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            ++ + NV   E  ++G    K D+A  L   M++    P    ++        T + N 
Sbjct: 47  SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL 106

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           V +    +E  G  H+ ++ NI+IN +C+  +   A S+  ++   G +P   T+NTL +
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL    +  +A+ L   M  N    D  TY + ++G+C
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGIC 204


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 224/378 (59%), Gaps = 26/378 (6%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+PP +  FN +LG L K+KHY TVLSL +++   G+ P L+ +    +    MG     
Sbjct: 72  PTPPAIE-FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ---HPHQLMG----- 122

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                      + PN +TFT+LIKGLC + +I +A      + A G + + + Y TLI+G
Sbjct: 123 -----------YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHG 171

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G T  AL+L + + +GN     + +PN V YS IIDG+CK+  V+ A +L+ +M  
Sbjct: 172 LCKVGETRAALDLLRRV-DGN-----LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVS 225

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + ++PNVVTY++LI GF       +A  L  +M+ + ++P+V + N++++  CK+GKM  
Sbjct: 226 KGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKE 285

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              +  +M++  ++PN  TY +LMDG+CL  ++N+ K +  +M   G   D  SYNILI+
Sbjct: 286 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILID 345

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+CK K+V+EA++L+ E+  K I P VVTYN+L  GL ++ +   ALKL  EM    V  
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY + +D LC   QV
Sbjct: 406 DIITYSSILDALCKNHQV 423



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 6/346 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  + K+KH +    L+  + S G+ P++ TYS LI+ F  +GQ+     +
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+V TF  L+ G C + ++ E   +F  +   G +PNV+TY +L++G C 
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++   M+    + GV   P+  +Y+I+IDG CK   VD+A  LF +M ++++
Sbjct: 315 VKEVNKAKSILYTMS----QRGV--NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SLI G C     + A  L+ EM D+GV P++++ + I++ LCKN ++D A  
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +RPN +TY  L+DG C  G++     +F  +   G      +Y ++I+G+C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
                +EAL+L +++      P  VTY  +   LF+  + ++A KL
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+      K  +   S+   ++  G+ PD+ +Y+ILI+ FCK+ +V     +
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+VVT+ SLI GLC   +I  A  L  ++   G  P++ITY+++++ LC+
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 419

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  ++ +         +PN  TY+I+IDGLCK G ++ A  +F  +  +  
Sbjct: 420 NHQVDKAIALLTKLKDQG------IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N  V TYT +IHGFC+   ++EA  LL +M D    P+ V+  +I+  L    + D A +
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK 533

Query: 249 LLDLMVQ 255
           L +++ +
Sbjct: 534 LREMITR 540



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 57/250 (22%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           + Y +   N + Y+S+   F + ND  +A  L   ++ Q   P  +  N I+  L K+  
Sbjct: 32  IPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKS-- 89

Query: 243 MDNASRLLDLMVQCDV-------------------RPNAFTYNTLMDGFCLTGKINRVKE 283
             +   +L L  Q +                     PN  T+ TL+ G CL G+I++   
Sbjct: 90  -KHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL 148

Query: 284 LFVSMESMGCKHDDFSYNIL-----------------------------------INGYC 308
              ++ +MG + D   Y  L                                   I+G C
Sbjct: 149 FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMC 208

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K V +A  LY+E+  KGI P VVTY+ L  G F + Q + A+ LF +M   ++  D  
Sbjct: 209 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVY 268

Query: 369 TYRTFIDGLC 378
           T+   +DG C
Sbjct: 269 TFNILVDGFC 278



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + +++ +L  L KN   D  ++L  +L   G+ P++YTY+ILI+  CK G++
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                IF  +L   +   V T+T +I G C +    EA AL +K+K   C P+ +TY  +
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518

Query: 123 INGLCRTGHTIVALNLFKEMTNG 145
           I  L        A  L + +T G
Sbjct: 519 IRSLFDKDENDKAEKLREMITRG 541


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 222/381 (58%), Gaps = 5/381 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           HM+   PP+  FN +L  L K  H+   +S  +++   G+ P+++T++ILINCF  + Q+
Sbjct: 45  HMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQL 104

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +  F +  +IL+  + P+ VT  +L++GLC   ++ EA      +       + ++Y TL
Sbjct: 105 NFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTL 164

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC++G T  AL L +++     E  ++ +P+ + Y+ IID  CK+  V  A +L+ +
Sbjct: 165 INGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + PNVVT+ SLI+GFC      EA GLL EM    V PNV + N++++ LCK G+
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A+ +L +M++  V PN  TY +LMDG+ L  ++N+ K +F ++   G   +  SY++
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +ING CKNK V+EA+ L+ E+  K + P  VTY++L  GL +  +      L  E+    
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
             A+  TY + ++GLC   QV
Sbjct: 400 QPANIITYNSLLNGLCKNHQV 420



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 199/371 (53%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N LL  L  N      L+    +       D  +Y  LIN  CK G+      +
Sbjct: 121 PDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQL 180

Query: 69  FGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             +I       P+V+ +T++I   C +  +++A  L++++      PNV+T+N+LI G C
Sbjct: 181 LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFC 240

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A+ L  EM+  N        PN  T++I+IDGLCKEG V KA  +   M  + 
Sbjct: 241 IVGQLKEAVGLLNEMSLNN------VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNVVTYTSL+ G+    + N+AK +   +  +GV PNV S +V++N LCKN  +D A 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L   M   ++ PN  TY++L+DG C +G+I+ V +L   + + G   +  +YN L+NG 
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN +V++A++L  ++  +GI+P + TY TL  GL +  + + A +++ ++       + 
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNI 474

Query: 368 CTYRTFIDGLC 378
             Y   I+GLC
Sbjct: 475 RMYTVMINGLC 485



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 191/376 (50%), Gaps = 30/376 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S+  L+  L K+      L L +++  + L  PD+  Y+ +I+ FCK   V   + ++  
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++     PNVVTF SLI G C   ++ EA  L  ++      PNV T+N LI+GLC+ G 
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279

Query: 132 TIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVTYSI 162
              A ++   M     E  VV                               PN  +YS+
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+GLCK   VD+A +LF +M  +N+ PN VTY+SLI G C +   ++   L+ E+ ++G
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
              N+++ N ++N LCKN ++D A  LL  M    ++P+  TY TL+DG C  G++   +
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            ++  +   G   +   Y ++ING CK    +EALSL +++   G  P  VTY TL   L
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519

Query: 343 FEIRQAERALKLFVEM 358
           F+  +  +A+KL  EM
Sbjct: 520 FKNNKNGKAVKLLREM 535



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%), Gaps = 6/246 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+      K  +    +F  ++  G+ P++++YS++IN  CK   V     +
Sbjct: 297 PNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKL 356

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VT++SLI GLC   RI +   L  ++   G   N+ITYN+L+NGLC+
Sbjct: 357 FKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCK 416

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  +M +         +P+  TY+ ++DGLCK G +  A+ ++  +  +  
Sbjct: 417 NHQVDKAIALLTKMKDEG------IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+  YT +I+G C    ++EA  LL +M D G  P+ V+   +++ L KN K   A +
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVK 530

Query: 249 LLDLMV 254
           LL  M+
Sbjct: 531 LLREMI 536



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 1/231 (0%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P    ++ I+  L K      A     QM+ + + P + T+  LI+ F H    N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + +++  G QP+ V+ N ++  LC NGK+  A    D +++     +  +Y TL++G C 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 275 TGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +G+     +L   +E +   + D   Y  +I+ +CK+K V +A  LY+E+  K I P VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           T+N+L +G   + Q + A+ L  EM  N+V  +  T+   IDGLC   +V+
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVK 281



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 74/136 (54%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P  + ++N LL  L KN   D  ++L  ++   G+ PD+ TY+ L++  CK G++    
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I+  +L   +  N+  +T +I GLC E    EA +L ++++  GC P+ +TY TLI+ L
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519

Query: 127 CRTGHTIVALNLFKEM 142
            +      A+ L +EM
Sbjct: 520 FKNNKNGKAVKLLREM 535


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/389 (37%), Positives = 228/389 (58%), Gaps = 20/389 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++H    P  + SFNIL+ C          LS F +L  +G  P L T++ L++  C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +VS    +F ++ +    PNVVTFT+L+ GLC E R+VEA AL  ++   G +PN ITY 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+++G+C+ G T+ ALNL ++M     E+  + KP+ V YS IIDGL K+G    A+ LF
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLF 175

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           ++M+ + + P++VTY+ +I+GFC +  W+EA+ LL EM+ + + P+VV+ + ++N L K 
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-SM-------- 291
           G +++A  LL  M+   V PN  T NTL+DG C +GK+    E+F +M+ SM        
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 292 --GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G + D  +YNILI+G     +  EA  LY E+P +GI P  VTY+++ +GL +  + +
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A ++F  M     + +  T+ T I G C
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYC 384


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/389 (37%), Positives = 228/389 (58%), Gaps = 20/389 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++H    P  + SFNIL+ C          LS F +L  +G  P L T++ L++  C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +VS    +F ++ +    PNVVTFT+L+ GLC E R+VEA AL  ++   G +PN ITY 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+++G+C+ G T+ ALNL ++M     E+  + KP+ V YS IIDGL K+G    A+ LF
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLF 175

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           ++M+ + + P++VTY+ +I+GFC +  W+EA+ LL EM+ + + P+VV+ + ++N L K 
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-SM-------- 291
           G +++A  LL  M+   V PN  T NTL+DG C +GK+    E+F +M+ SM        
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 292 --GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G + D  +YNILI+G     +  EA  LY E+P +GI P  VTY+++ +GL +  + +
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A ++F  M     + +  T+ T I G C
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYC 384


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 218/369 (59%), Gaps = 8/369 (2%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P+  FN +LG L K K+Y TV+SL K+++  G+  +L T SILINCFC +GQ++  F + 
Sbjct: 9   PIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLL 68

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
           G+IL+  + PN +T+T+L+KGLC +  + +      K+ A   + N ++Y TL+NGLC+T
Sbjct: 69  GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G T  A+ L + + + +       +PN V YS IIDGLCK+  V++A +L+ +M    + 
Sbjct: 129 GETRCAIKLLRMIEDRST------RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV+TY +LI  FC A     A  LL EM+ + + P+V + +++++ LCK GK  NA ++
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQI 240

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              MVQ  V PN ++YN +++G C   +++    L   M       D  +YN LI+G CK
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  +  AL+L NE+  +G    VVTY +L   L + +  ++A  LF++M+   +     T
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360

Query: 370 YRTFIDGLC 378
           Y   IDGLC
Sbjct: 361 YTALIDGLC 369



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 177/353 (50%), Gaps = 31/353 (8%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           +Y  L+N  CK G+      +   I      PNVV ++++I GLC +  + EA  L++++
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN--------------------- 146
            A    PNVITYNTLI   C  G  + A +L  EM   N                     
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN 236

Query: 147 ------GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
                   + +   PN  +Y+I+I+GLCK   VD+A  L  +M ++N+ P+ VTY SLI 
Sbjct: 237 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 296

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G C +     A  L+ EM  +G   +VV+   +++ LCKN  +D A+ L   M +  ++P
Sbjct: 297 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 356

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
             +TY  L+DG C  G++   +ELF  +   GC  D ++Y ++I+G CK    +EAL++ 
Sbjct: 357 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 416

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +++   G  P  VT+  +   LFE  + ++A KL  EM    +A     +R F
Sbjct: 417 SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM----IAKGLLGFRNF 465



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 169/322 (52%), Gaps = 8/322 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  ++ ++  L K+K  +    L+  +++  +FP++ TY+ LI  FC  GQ+   F
Sbjct: 146 TRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAF 205

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P+V TF+ LI  LC E +   A  +F  +   G  PNV +YN +INGL
Sbjct: 206 SLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGL 263

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A+NL +EM + N        P+TVTY+ +IDGLCK G +  A  L  +M + 
Sbjct: 264 CKCKRVDEAMNLLREMLHKN------MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
               +VVTYTSL+   C   + ++A  L ++M ++G+QP + +   +++ LCK G++ NA
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   ++      + +TY  ++ G C  G  +    +   ME  GC  +  ++ I+I  
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 307 YCKNKEVEEALSLYNELPFKGI 328
             +  E ++A  L +E+  KG+
Sbjct: 438 LFEKDENDKAEKLLHEMIAKGL 459



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 87/172 (50%)

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M  +G++ N+V+ ++++N  C  G+M  +  LL  +++    PN  T+ TLM G CL G
Sbjct: 35  QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++ ++      + +   + +  SY  L+NG CK  E   A+ L   +  +  +P VV Y+
Sbjct: 95  EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            +  GL + +    A  L+ EM   ++  +  TY T I   C+  Q+   ++
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFS 206



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++  LL  L KN++ D   +LF ++   G+ P +YTY+ LI+  CK G++
Sbjct: 315 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 374

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      +V T+T +I GLC E    EA A+ +K++  GC PN +T+  +
Sbjct: 375 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 434

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  L  EM
Sbjct: 435 IRSLFEKDENDKAEKLLHEM 454


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 133/380 (35%), Positives = 220/380 (57%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  + K K YD V+SL K++  +G+  DLYT++I+INCFC   QVSL   +
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++L+  + P+ VT  SL+ G C  +R+ +A +L  K+   G  P+++ YN +I+ LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     AL+ FKE+    G  G+  +PN VTY+ +++GLC  G  + A  L   M    +
Sbjct: 203 TRRVNDALDFFKEI----GRKGI--RPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++L+  F       EAK +  EMV   + P++V+ + ++N LC + ++D A++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV     P+  +YNTL++GFC   ++    +LF  M   G  ++  +YN LI G+ 
Sbjct: 317 MFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFF 376

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V++A   ++++   G+ P + TYN L  GL +    E+AL +F +MQ +++  D  
Sbjct: 377 QVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIV 436

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY T I G+C   +V   + 
Sbjct: 437 TYTTVIQGMCKTGKVEDAWG 456



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 168/320 (52%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K +  +  L  FK +   G+ P++ TY+ L+N  C  G+ +    +
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNV+T+++L+       +++EA  +F ++     +P+++TY++LINGLC 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F  M +        F P+ V+Y+ +I+G CK   V+   +LF +M    L
Sbjct: 308 HDRIDEANQMFDLMVSKG-----CF-PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY +LI GF    D ++A+    +M   GV P++ + N+++  LC NG ++ A  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M + ++  +  TY T++ G C TGK+     LF S+   G K D  +Y  +++G C
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 309 KNKEVEEALSLYNELPFKGI 328
                 E  +LY ++  +G+
Sbjct: 482 TKGLQHEVEALYTKMKQEGL 501



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 157/289 (54%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +  ++    L + +    + P++ TYS L++ F K G+V     I
Sbjct: 223 PNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEI 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P++VT++SLI GLC   RI EA  +F  + + GC P+V++YNTLING C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCK 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF++M+    + G+V   NTVTY+ +I G  + G VDKA+E F QM    +
Sbjct: 343 AKRVEDGMKLFRKMS----QRGLV--NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY  L+ G C      +A  +  +M    +  ++V+   ++  +CK GK+++A  
Sbjct: 397 SPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWG 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           L   +    ++P+  TY T+M G C  G  + V+ L+  M+  G   +D
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 41/316 (12%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           ++ +A  LF ++      P+++ +N L++ + +     V ++L K+M      +G+  + 
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKME----VLGI--RN 118

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  T++I+I+  C    V  A  +  +M      P+ VT  SL++GFC  N  ++A  L+
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 216 IEMVD-----------------------------------QGVQPNVVSSNVIMNELCKN 240
            +MV+                                   +G++PNVV+   ++N LC +
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+ ++A+RLL  M++  + PN  TY+ L+D F   GK+   KE+F  M  M    D  +Y
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LING C +  ++EA  +++ +  KG  P VV+YNTL +G  + ++ E  +KLF +M  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 361 NDVAADTCTYRTFIDG 376
             +  +T TY T I G
Sbjct: 359 RGLVNNTVTYNTLIQG 374


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 218/405 (53%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ L   +A+ K YD VL   K ++  G+  ++YT +I+INCFC+  ++   F +
Sbjct: 67  PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
            GR L+  F PN +TF++LI G C E R+ EA AL  ++      PNV+T NTLINGLC 
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186

Query: 128 ----------------------------------RTGHTIVALNLFKEMTNGNGEIGVVF 153
                                             ++G+T +AL+LF++M   +       
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERS------I 240

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K + V YSI+ID LCK+G +D A  LF +M+ + +  +VV Y+S+I G C+   W++   
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L EM+ + + PNVV+ + +++   K GK+  A  L + MV   + P+  TY++L+DGFC
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              ++    ++   M S GC+ +  +Y+ILIN YCK K V+  + L+ E+  KG+    V
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNTL  G  +  +   A +LF EM    V     TY   +DGLC
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLC 465



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
             V  ++I++  L K+ + D  LSLF  +   G+  D+  YS +I   C  G+   G  +
Sbjct: 242 ASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVTF++LI     E +++EA  L+ ++ A G  P+ ITY++LI+G C+
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +   M +   E      PN VTYSI+I+  CK   VD    LF ++  + L
Sbjct: 362 ENRLGEANQMLDLMVSKGCE------PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTY +L+ GFC +   N AK L  EMV +GV P+VV+  ++++ LC NG++  A  
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M +  +      YN ++ G C   K++    LF S+   G K D  +YN++I G C
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L+ ++   G  P+  TYN L            +++L  EM+    AAD  
Sbjct: 536 KKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAS 595

Query: 369 TYRTFI 374
           T +  +
Sbjct: 596 TIKMVV 601



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 35/241 (14%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V++A +LF  M      P+++ ++ L        +++   G   EM   G++ N+ + N+
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN------------- 279
           ++N  C+  K+  A  ++   ++    PN  T++TL++GFCL G+++             
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 280 -------------------RVKELFVSMESM---GCKHDDFSYNILINGYCKNKEVEEAL 317
                              RV E  V ++ M   GC+ ++ +Y  ++N  CK+     AL
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L+ ++  + IK +VV Y+ +   L +    + AL LF EM+   + AD   Y + I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 378 C 378
           C
Sbjct: 290 C 290



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 6/169 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++ ILL  L  N      L +F+++    +   +  Y+I+I+  C   +V   + 
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWS 510

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+V+T+  +I GLC +  + EA  LF K+K  GC P+  TYN LI    
Sbjct: 511 LFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHL 570

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII--DGLCKEGFVD 174
                I ++ L +EM       G     +T+   +++  DG   + F+D
Sbjct: 571 GGSGVISSVELIEEMKMR----GFAADASTIKMVVVMLSDGRLDKTFLD 615



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 4/161 (2%)

Query: 227 VVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           +  + V   E  +NG    K++ A  L + M+Q    P+   ++ L        + + V 
Sbjct: 30  ISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
                M+  G +H+ ++ NI+IN +C+ +++  A S+       G +P  +T++TL +G 
Sbjct: 90  GFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF 149

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +   A+ L   M       +  T  T I+GLC++ +V
Sbjct: 150 CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/380 (34%), Positives = 216/380 (56%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  + K K YD V+SL K++  +G+  DLYT++I+INCFC   QVSL   I
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++L+  + P+ VT  SL+ G C  +R+ +A +L  K+   G +P+++ YN +I+ LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A + FKE+           +PN VTY+ +++GLC       A  L   M  + +
Sbjct: 203 TKRVNDAFDFFKEIERKG------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++L+  F       EAK L  EMV   + P++V+ + ++N LC + ++D A++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV      +  +YNTL++GFC   ++    +LF  M   G   +  +YN LI G+ 
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V++A   ++++ F GI P + TYN L  GL +  + E+AL +F +MQ  ++  D  
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY T I G+C   +V   ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWS 456



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 42/363 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +   P  V+  +++ G   +N+  D V SL  ++  IG  PD+  Y+ +I+  CK  
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V+  F  F  I R    PNVVT+T+L+ GLC  SR  +AA L + +      PNVITY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE-- 178
            L++   + G  + A  LF+EM      + +   P+ VTYS +I+GLC    +D+A +  
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEM------VRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 179 ---------------------------------LFLQMKYENLNPNVVTYTSLIHGFCHA 205
                                            LF +M    L  N VTY +LI GF  A
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A+    +M   G+ P++ + N+++  LC NG+++ A  + + M + ++  +  TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            T++ G C TGK+     LF S+   G K D  +Y  +++G C    + E  +LY ++  
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 326 KGI 328
           +G+
Sbjct: 499 EGL 501



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 157/289 (54%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +  +     L   +    + P++ TYS L++ F K G+V     +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P++VT++SLI GLC   RI EA  +F  + + GC  +V++YNTLING C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF+EM+    + G+V   NTVTY+ +I G  + G VDKA+E F QM +  +
Sbjct: 343 AKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY  L+ G C   +  +A  +  +M  + +  ++V+   ++  +CK GK++ A  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           L   +    ++P+  TY T+M G C  G ++ V+ L+  M+  G   +D
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 41/313 (13%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A  LF+ +      P+++ +N L++ + +     V ++L K+M      +G+  + +  
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RNDLY 121

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T++I+I+  C    V  A  +  +M      P+ VT  SL++GFC  N  ++A  L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 219 VD-----------------------------------QGVQPNVVSSNVIMNELCKNGKM 243
           V+                                   +G++PNVV+   ++N LC + + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +A+RLL  M++  + PN  TY+ L+D F   GK+   KELF  M  M    D  +Y+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING C +  ++EA  +++ +  KG    VV+YNTL +G  + ++ E  +KLF EM    +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 364 AADTCTYRTFIDG 376
            ++T TY T I G
Sbjct: 362 VSNTVTYNTLIQG 374



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NILLG L  N   +  L +F+ +    +  D+ TY+ +I   CK G+V   + +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++VT+T+++ GLC +  + E  AL+TK+K  G   N  T +        
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS-------- 509

Query: 129 TGHTIVALNLFKEM 142
            G   ++  L K+M
Sbjct: 510 DGDITLSAELIKKM 523


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/380 (34%), Positives = 216/380 (56%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN LL  + K K YD V+SL K++  +G+  DLYT++I+INCFC   QVSL   I
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++L+  + P+ VT  SL+ G C  +R+ +A +L  K+   G +P+++ YN +I+ LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A + FKE+           +PN VTY+ +++GLC       A  L   M  + +
Sbjct: 203 TKRVNDAFDFFKEIERKG------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++L+  F       EAK L  EMV   + P++V+ + ++N LC + ++D A++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV      +  +YNTL++GFC   ++    +LF  M   G   +  +YN LI G+ 
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V++A   ++++ F GI P + TYN L  GL +  + E+AL +F +MQ  ++  D  
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY T I G+C   +V   ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWS 456



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 42/363 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +   P  V+  +++ G   +N+  D V SL  ++  IG  PD+  Y+ +I+  CK  
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V+  F  F  I R    PNVVT+T+L+ GLC  SR  +AA L + +      PNVITY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE-- 178
            L++   + G  + A  LF+EM      + +   P+ VTYS +++GLC    +D+A +  
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEM------VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318

Query: 179 ---------------------------------LFLQMKYENLNPNVVTYTSLIHGFCHA 205
                                            LF +M    L  N VTY +LI GF  A
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A+    +M   G+ P++ + N+++  LC NG+++ A  + + M + ++  +  TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            T++ G C TGK+     LF S+   G K D  +Y  +++G C    + E  +LY ++  
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 326 KGI 328
           +G+
Sbjct: 499 EGL 501



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 157/289 (54%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +  +     L   +    + P++ TYS L++ F K G+V     +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P++VT++SL+ GLC   RI EA  +F  + + GC  +V++YNTLING C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + LF+EM+    + G+V   NTVTY+ +I G  + G VDKA+E F QM +  +
Sbjct: 343 AKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY  L+ G C   +  +A  +  +M  + +  ++V+   ++  +CK GK++ A  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           L   +    ++P+  TY T+M G C  G ++ V+ L+  M+  G   +D
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 76/350 (21%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A  LF+ +      P+++ +N L++ + +     V ++L K+M      +G+  + +  
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RNDLY 121

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T++I+I+  C    V  A  +  +M      P+ VT  SL++GFC  N  ++A  L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 219 VD-----------------------------------QGVQPNVVSSNVIMNELCKNGKM 243
           V+                                   +G++PNVV+   ++N LC + + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM------------ 291
            +A+RLL  M++  + PN  TY+ L+D F   GK+   KELF  M  M            
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 292 -----------------------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
                                  GC  D  SYN LING+CK K VE+ + L+ E+  +G+
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               VTYNTL  G F+    ++A + F +M    ++ D  TY   + GLC
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NILLG L  N   +  L +F+ +    +  D+ TY+ +I   CK G+V   + +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++VT+T+++ GLC +  + E  AL+TK+K  G   N  T +        
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS-------- 509

Query: 129 TGHTIVALNLFKEM 142
            G   ++  L K+M
Sbjct: 510 DGDITLSAELIKKM 523


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/422 (32%), Positives = 228/422 (54%), Gaps = 46/422 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC----------- 57
           P +  F+ LL  +AK   +D V+S  +++  +G+  +LYTY+ILINCFC           
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 58  -----KMG-------------------QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                K+G                   ++S    +  +++   + P+ VTFT+LI GL  
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
            ++  EA AL  ++   GC+P+++TY  ++NGLC+ G T +ALNL  +M     E     
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE----- 250

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N V YS +ID LCK    D A  LF +M+ + + PNV+TY+SLI   C+   W++A  
Sbjct: 251 -ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+++ + PN+V+ + +++   K GK+  A +L + M++  + PN FTY++L++GFC
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +  ++   K++   M    C  +  +YN LING+CK K V++ + L+ E+  +G+    V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYA 388
           TY TL HG F+ R  + A  +F +M    V  +  TY   +DGLC      +  V F Y 
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489

Query: 389 RR 390
           +R
Sbjct: 490 QR 491



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 151/264 (57%), Gaps = 6/264 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ ++  L K +H D  L+LF  + + G+ P++ TYS LI+C C  G+ S    +   ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+VTF++LI     + ++V+A  L+ ++     +PN+ TY++LING C      
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  + + M   +        PN VTY+ +I+G CK   VDK  ELF +M    L  N V
Sbjct: 376 EAKQMLELMIRKDC------LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LIHGF  A D + A+ +  +MV  GV PN+++ N++++ LCKNGK+  A  + + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGK 277
            +  + P+ +TYN +++G C  GK
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 161/344 (46%), Gaps = 42/344 (12%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  V+   ++ G    NK  + V +L  R+   G  PDL TY  ++N  CK G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAV-ALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
              L   +  ++  +    NVV ++++I  LC      +A  LFT+++  G  PNVITY+
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+ LC  G    A  L  +M      I     PN VT+S +ID   K+G + KA++L+
Sbjct: 293 SLISCLCNYGRWSDASRLLSDM------IERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 181 LQMKYENLNPN-----------------------------------VVTYTSLIHGFCHA 205
            +M   +++PN                                   VVTY +LI+GFC A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
              ++   L  EM  +G+  N V+   +++   +    DNA  +   MV   V PN  TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           N L+DG C  GK+ +   +F  ++    + D ++YNI+I G CK
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 31/230 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+ CL     +     L   +    + P+L T+S LI+ F K G++     +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++    PN+ T++SLI G C   R+ EA  +   +    C PNV+TYNTLING C+
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405

Query: 129 TGHTIVALNLFKEMTNGNGEIG----------------------VVFK--------PNTV 158
                  + LF+EM+   G +G                      +VFK        PN +
Sbjct: 406 AKRVDKGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
           TY+I++DGLCK G + KA  +F  ++   + P++ TY  +I G C A  W
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 142/279 (50%), Gaps = 6/279 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A  LF  +      P++I ++ L++ + +     + ++  ++M     EI +    N  
Sbjct: 61  DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-----EI-LGISHNLY 114

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+I+I+  C+   +  A  L  +M      P++VT  SL++GFCH N  ++A  L+ +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V+ G +P+ V+   +++ L  + K   A  L+D MVQ   +P+  TY  +++G C  G  
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    L   ME+   + +   Y+ +I+  CK +  ++AL+L+ E+  KG++P V+TY++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              L    +   A +L  +M    +  +  T+   ID  
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 4/242 (1%)

Query: 141 EMTNGNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           E+ +  G  GV+ +    P+ + +S ++  + K    D       +M+   ++ N+ TY 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LI+ FC  +  + A  LL +M+  G +P++V+ N ++N  C   ++ +A  L+D MV+ 
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +P+  T+ TL+ G  L  K +    L   M   GC+ D  +Y  ++NG CK  + + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           L+L N++    I+  VV Y+T+   L + R  + AL LF EM+   V  +  TY + I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 377 LC 378
           LC
Sbjct: 298 LC 299



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%)

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           + ++A GL   M      P+++  + +++ + K  K D      + M    +  N +TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L++ FC   +++    L   M  +G + D  + N L+NG+C    + +A++L +++   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           G KP  VT+ TL HGLF   +A  A+ L   M       D  TY   ++GLC R
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NILL  L KN      + +F+ L    + PD+YTY+I+I   CK G+  +G + 
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520

Query: 69  F 69
           F
Sbjct: 521 F 521


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 221/405 (54%), Gaps = 42/405 (10%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN LL  +AK  +Y TV  +++++N +G+ PDLYT +ILI+C C +  V  GF +
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            FG  L+  F P+ VT T+L+KG+  E+ I +A  LF ++   G   +  TY  LINGLC+
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               T +A+ L ++M  GN       K +  TY +IID LCK+G   +A ++F +M    +
Sbjct: 1064 ARKTGLAIKLHEKM-KGN------CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI 1116

Query: 189  NPNVV-----------------------------------TYTSLIHGFCHANDWNEAKG 213
             P+VV                                   TY SLIHG   A  W E   
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 1176

Query: 214  LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
             L  MVD+G  P+  +  ++++ LCK GK+  A ++L+LM      P+  TYNTLM+G C
Sbjct: 1177 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC 1236

Query: 274  LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            L G++    +LF S+   G K + FSYNILINGYCK+++++EA   + E+  KG+KP+ V
Sbjct: 1237 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296

Query: 334  TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TYNTL   L +  +   A KLFVEMQ         TY   +DGLC
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 1341



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 207/371 (55%), Gaps = 13/371 (3%)

Query: 11   VSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
              ++ IL+  L K +     + L +++  N  G   D++TY ++I+  CK G  +    +
Sbjct: 1051 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDALCKDGMTTEALDM 1107

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  ++ +   P+VV ++SL+ GLC   R+ EA   F +++  G   +V TYN+LI+GL R
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 129  TGHTIVALNLFKEMTNG-NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G       L+KE+T   N  +   F P+  T++I+IDGLCKEG V +A+++   M+++ 
Sbjct: 1168 AG-------LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              P+++TY +L++G C      +A  L   + D+G++ NV S N+++N  CK+ K+D A 
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAF 1280

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            R  + M    ++P+  TYNTL+   C +G++   ++LFV M++ G      +Y +L++G 
Sbjct: 1281 RFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGL 1340

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            CKN  +EEA+ L+  +     KP +  ++ L  G+    + E A K F E+  N +  DT
Sbjct: 1341 CKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDT 1400

Query: 368  CTYRTFIDGLC 378
              Y   I+GLC
Sbjct: 1401 IAYNILINGLC 1411



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 184/358 (51%), Gaps = 6/358 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  ++ L+  L +       L  FK +   G+  D+YTY+ LI+   + G        
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               ++   F+P+  TFT LI GLC E ++ EA  +   ++  G EP+++TYNTL+NGLC 
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  LF+ + +         K N  +Y+I+I+G CK+  +D+A   F +M+ + L
Sbjct: 1238 VGQLEDATKLFESLADRG------IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P+ VTY +LI   C +     A+ L +EM   G    + +  V+++ LCKNG ++ A  
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L   + + + +PN   ++ L+DG C  GK+    + F  +   G + D  +YNILING C
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
                + EA+ L  ++  KG  P  +T+N +   L +  +   A++L  EM+  + + D
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 6/296 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +F IL+  L K         + + +   G  PD+ TY+ L+N  C +GQ+     +
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  +       NV ++  LI G C + +I EA   F +++  G +P+ +TYNTLI  LC+
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +G    A  LF EM       G   K +T  Y +++DGLCK G +++A +LF  +K    
Sbjct: 1308 SGRVRTAQKLFVEMQT----CGQFLKLST--YCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             PN+  ++ L+ G C A    EA     E+   G++P+ ++ N+++N LC  G +  A +
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 1421

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            LL  M +    P++ T+N ++       +I+   +L   M +     D+   ++L+
Sbjct: 1422 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 234  MNELCKNG--KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            + + C+ G  K+++A +L D  +  +  P   T+N L+      G  + V  ++  +  +
Sbjct: 916  VRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDV 975

Query: 292  GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
            G + D ++ NILI+  C  + V     ++     +G +P  VT  TL  G++       A
Sbjct: 976  GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035

Query: 352  LKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++LF EM    +  D  TY   I+GLC
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLC 1062


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 219/392 (55%), Gaps = 21/392 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H +P+P  +  F  +LG L K  HY  V+SL +++   GL  +L T SILINC+ ++G
Sbjct: 3   LHHKNPTPS-IFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q +L F +F  IL+  +  + +TFT+LIKGLC +  I +A     K+ A G + N ++Y 
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T  AL   + +       G + +P+ V Y+ IIDGLCK+  V+ A  L+
Sbjct: 122 TLINGLCKVGQTRAALEFLRRID------GKLVQPDVVMYNTIIDGLCKDKLVNDAFNLY 175

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + + P+VVTY +LI G C      +A GLL +M+ + + P V + +++++  CK 
Sbjct: 176 FEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKE 235

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-----------E 289
           GKM  A  +  +M++ DV+PN  TYN+LMDG  L   + + K +F +M           E
Sbjct: 236 GKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFE 295

Query: 290 SMGCKH---DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M  K    D   YN LI+G CK+     AL    E+ ++G  P + TYN+L   L +  
Sbjct: 296 EMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNY 355

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++A++L  +++   +    CTY   I+GLC
Sbjct: 356 HVDKAIELLTKLKDQGIQPSVCTYNILINGLC 387



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 45/291 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L         + L  ++    + P +YT+SILI+ FCK G++     +
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 69  FGRILRSCFAPNVVTFTSLIKG-----LCAESRIV---------EAAALFTKLKAFGCEP 114
           F  +++    PN+VT+ SL+ G     +  +++ +         EA  LF ++      P
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYP 304

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF--------------------- 153
           +++ YN+LI+GLC++G T  AL    EM +  G+   +F                     
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGEM-HYRGQPPDIFTYNSLLDALCKNYHVDKAIEL 363

Query: 154 ---------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    +P+  TY+I+I+GLCK G +  A+++F  +  +  N +V TY ++I GFC 
Sbjct: 364 LTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCK 423

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
              ++E   ++ +M D G  P+  +  +I+  L   G+ D A +  +++V+
Sbjct: 424 KGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVR 474



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 99/202 (49%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           + ++N  P++  +  ++     AN ++    L  +M   G+  N+V+ ++++N   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              +  +   +++     +A T+ TL+ G CL G+I++       + + G K +  SY  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LING CK  +   AL     +  K ++P VV YNT+  GL + +    A  L+ EM    
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           +     TY T I GLC+  Q++
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLK 204



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N LL  L KN H D  + L  +L   G+ P + TY+ILIN  CK G++
Sbjct: 333 HYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRL 392

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   +  +V T+ ++IKG C +    E  A+ +K+K  GC P+      +
Sbjct: 393 KDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEII 452

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L   G    A   F+EM
Sbjct: 453 IRSLFDKGENDKA-GKFREM 471



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 6/174 (3%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P +  +N L+  L K+      L     ++  G  PD++TY+ L++  CK   V
Sbjct: 298 HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHV 357

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +  ++      P+V T+  LI GLC   R+ +A  +F  L   G   +V TYN +
Sbjct: 358 DKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAM 417

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           I G C+ G     L +  +M +          P+     III  L  +G  DKA
Sbjct: 418 IKGFCKKGLFDETLAMVSKMKDSGCS------PDAKNCEIIIRSLFDKGENDKA 465


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  257 bits (657), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 214/398 (53%), Gaps = 12/398 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKM 59
           M  M P  P V  F +LLG + + KHY T +SL K + +S+G+  D  T +I+INC C++
Sbjct: 67  MARMKP-LPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRL 125

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
             V+ GF + G + +    P V+T T+LI GLC +  + +A  L   ++      +V TY
Sbjct: 126 KLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTY 185

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             LINGLC+TG T+ A+   ++M   N      +KPN V YS I+DGLCK+G V +A  L
Sbjct: 186 GVLINGLCKTGDTLAAVGWLRKMEERN------WKPNVVVYSTIMDGLCKDGLVSEALNL 239

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M  + + PN+VTY  LI G C+   W EA  LL EM+  G++P++   N++++  CK
Sbjct: 240 CSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCK 299

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A  ++  M+     P+ FTYN+L+  +CL  K+N    +F  M S G   D   
Sbjct: 300 EGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVV 359

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +  LI+G+CK+K + +A+ L  E+   G  P V T+ TL  G  +  +   A +LF+ M 
Sbjct: 360 FTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMH 419

Query: 360 GNDVAADTCTYRTFIDGLC----VRPQVRFTYARRKGN 393
                 +  T    +DGLC    +   V    A  K N
Sbjct: 420 KYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+      L+L   +N  G+ P+L TY+ LI   C  G+      +
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSL 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P++     L+   C E ++++A ++   +   G  P+V TYN+LI+  C 
Sbjct: 275 LDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M +  G +     P+ V ++ +I G CK+  ++KA  L  +M     
Sbjct: 335 QNKMNEAMRVFHLMVS-RGRL-----PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGF 388

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+T+LI GFC A     AK L + M   G  PN+ +  VI++ LCK   +  A  
Sbjct: 389 VPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS 448

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M + ++  N   Y+ L+DG C  GK+N   ELF S+   G + + + Y I+I G C
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLC 508

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +++A  L   +   G  P   TYN    GL   ++  R++K    M+    + D  
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568

Query: 369 TYRTFIDGL 377
           T    I+ L
Sbjct: 569 TTEFIINYL 577



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 6/303 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   NIL+    K        S+   +   G  PD++TY+ LI+ +C   +++    +
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P++V FTSLI G C +  I +A  L  ++   G  P+V T+ TLI G C+
Sbjct: 345 FHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQ 404

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  LF  M +  G++     PN  T ++I+DGLCKE  + +A  L   M+  NL
Sbjct: 405 AGRPLAAKELFLNM-HKYGQV-----PNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNL 458

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+V Y+ L+ G C A   N A  L   +  +G+Q NV    +++  LCK G +D A  
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAED 518

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PN  TYN  + G     +I R  +    M   G   D  +   +IN   
Sbjct: 519 LLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLS 578

Query: 309 KNK 311
            N+
Sbjct: 579 TNE 581



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   P + +  ++L  L K       +SL K +    L  ++  YSIL++  C  G++
Sbjct: 419 HKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +  + +F  +       NV  +T +IKGLC +  + +A  L   ++  GC PN  TYN  
Sbjct: 479 NAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVF 538

Query: 123 INGL 126
           + GL
Sbjct: 539 VQGL 542



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 10/154 (6%)

Query: 232 VIMNELCKNGKMDNASRLLDL---MVQCDVRPNAFTYNTLMDGFC----LTGKINRVKEL 284
           + M  LC +GK+ N    LDL   M +    P+   +  L+         T  I+ VK +
Sbjct: 43  ISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHM 102

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F    S+G + D  + NI+IN  C+ K V    S+   +   G++PTV+T  TL +GL  
Sbjct: 103 F---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCV 159

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                +A+ L   M+      D  TY   I+GLC
Sbjct: 160 QGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLC 193


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 214/398 (53%), Gaps = 12/398 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKM 59
           M  M P  P V  F +LLG + + KHY T +SL K + +S+G+  D  T +I+INC C++
Sbjct: 67  MASMKP-LPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRL 125

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
             V+ GF + G + +    P V+T T+LI GLC +  + +A  L   ++      +V TY
Sbjct: 126 KLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTY 185

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             LINGLC+TG T+ A+   ++M   N      +KPN V YS I+DGLCK+G V +A  L
Sbjct: 186 GVLINGLCKTGDTLAAVEWLRKMEERN------WKPNVVVYSTIMDGLCKDGLVSEALNL 239

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M  + + PN+VTY  LI G C+   W E   LL EM+  G++ ++ + N++++  CK
Sbjct: 240 CSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCK 299

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A  ++  M+     P+ FTYN+L+  +CL  K+N    +F  M S GC  D   
Sbjct: 300 EGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVV 359

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +  LI+G+CK+K + + + L  E+   G  P VVT+ TL  G  +  +   A +LF+ M 
Sbjct: 360 FTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMH 419

Query: 360 GNDVAADTCTYRTFIDGLC----VRPQVRFTYARRKGN 393
                 +  T    +DGLC    +   V    A  K N
Sbjct: 420 KYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+      L+L   ++  G+ P+L TY+ LI   C  G+      +
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSL 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++     ++ T   L+   C E ++++A ++   +   G  P+V TYN+LI+  C 
Sbjct: 275 LDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F  M +  G +     P+ V ++ +I G CK+  ++K   L  +M     
Sbjct: 335 QNKMNEAMRVFHLMVS-RGCL-----PDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGF 388

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+T+LI GFC A     AK L + M   G  PN+ +  VI++ LCK   +  A  
Sbjct: 389 VPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVS 448

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M + ++  N   Y+ L+DG C  GK+N   ELF S+   G + + ++Y I+I G C
Sbjct: 449 LAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLC 508

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +++A  L   +   G  P   TYN    GL   ++  R++K    M+    + D  
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568

Query: 369 TYRTFIDGL 377
           T    I+ L
Sbjct: 569 TTEITINYL 577



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 6/301 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + + NIL+    K        S+   +   G  PD++TY+ LI+ +C   +++    +F 
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P++V FTSLI G C +  I +   L  ++   G  P+V+T+ TLI G C+ G
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             + A  LF  M +  G++     PN  T ++I+DGLCK   + +A  L   M+  NL+ 
Sbjct: 407 RPLAAKELFLNM-HKYGQV-----PNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDL 460

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+V Y+ L+ G C A   N A  L   +  +G+Q NV +  +++  LCK G +D A  LL
Sbjct: 461 NIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLL 520

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    P+  TYN  + G     +I R  +    M   G   D  +  I IN    N
Sbjct: 521 INMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580

Query: 311 K 311
           +
Sbjct: 581 E 581



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 43/307 (14%)

Query: 80  NVVTFTSLIKGLCAESR---IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           N   F   ++ LC   +   I EA  LF  + +    P+V  +  L+  + R  H   A+
Sbjct: 37  NGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAI 96

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L K + +  G      + +T+T +I+I+ LC+   V                       
Sbjct: 97  SLVKHIFSSLG-----IEADTITLNIVINCLCRLKLV----------------------- 128

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
               GF           +L  M   G++P V++   ++N LC  G +  A  L+D M + 
Sbjct: 129 --AFGF----------SVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKM 176

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
               + +TY  L++G C TG      E    ME    K +   Y+ +++G CK+  V EA
Sbjct: 177 RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           L+L +E+  KG++P +VTY  L  GL    + +    L  EM    +  D  T    +D 
Sbjct: 237 LNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDA 296

Query: 377 LCVRPQV 383
            C   +V
Sbjct: 297 FCKEGKV 303



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   P + +  ++L  L K       +SL + +    L  ++  YSIL++  C  G++
Sbjct: 419 HKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +  + +F  +       NV T+T +IKGLC +  + +A  L   ++  GC P+  TYN  
Sbjct: 479 NAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVF 538

Query: 123 INGL 126
           + GL
Sbjct: 539 VQGL 542


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  257 bits (656), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/396 (36%), Positives = 211/396 (53%), Gaps = 42/396 (10%)

Query: 2   RHMHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +H  PPP +  FN LL  +AK KH+ T+LSL ++++S G+ PD+YT +I+        
Sbjct: 35  RMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV-------- 86

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
                                      I  LC  +R+  A +   K+   G +P+  T+ 
Sbjct: 87  ---------------------------INSLCHLNRVDFAFSALAKILKLGHQPDATTFT 119

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLC  G    AL+LF +M      IG  F+PN VTY  +I+GLCK+  V +A  +F
Sbjct: 120 TLIRGLCVEGKIGEALHLFDKM------IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIF 173

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN+VTY SLIHG C   +W     L+ EMVD  + P+V + N +++ LCK 
Sbjct: 174 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 233

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++D+M+   V PN  TYN LMDG CL  +++   ++F +M    C  +  SY
Sbjct: 234 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 293

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LINGYCK + V++A+ L+ E+  + + P  VTYNTL HGL  + + + A+ LF EM  
Sbjct: 294 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 353

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
                D  TYRT  D LC    +    A  K   G+
Sbjct: 354 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 389



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 215/426 (50%), Gaps = 58/426 (13%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PP    F  LL  +AK KHY TVLSL  +++S G+ PD+YT +ILIN FC + 
Sbjct: 572 MLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 630

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +  ++L+  F P+VVT+ +L+ GLC             K+   G  P++ TYN
Sbjct: 631 RLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYN 677

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+ LC          L  EM N          PN V +S ++D LCKEG +  A ++ 
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    + P+VVTYT+L+ G C  ++ +EA  +   MV +G  PNV S N+++N  C+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-------- 292
            +MD A  LL+ M    +  +  TYNTL+ G C  G++     LF  M + G        
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 293 -------CKH--------------------DDFSYNILINGYCKNKEVEEALSLYNELPF 325
                  CK+                    D   YNI I+G C+  E+E A  L++ L  
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR---TFIDGLCVRPQ 382
           KG++P V TYN + HGL +    + A KLF +M  ND+ +++ + R   + I    + P+
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPE 971

Query: 383 VRFTYA 388
           +   Y+
Sbjct: 972 IDLVYS 977



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K++      ++F  + + G+ P++ TY+ LI+  CK+ +      +
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P+V T  +++  LC E  + EA  +   +   G EPNV+TYN L++G C 
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                VA+ +F  M + +         N ++Y+ +I+G CK   VDKA  LF +M  + L
Sbjct: 268 RNEVDVAVKVFDTMVHKDC------VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LIHG CH     +A  L  EMV +G  P++V+   + + LCKN  +D A  
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +   +  P+   Y T++DG C  G++   ++LF ++ S G + + ++YNI+I+G C
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L++E+   G  P   TYN +  G     +A R ++L  EM     + D  
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501

Query: 369 T 369
           T
Sbjct: 502 T 502



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 167/310 (53%), Gaps = 19/310 (6%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L     P+ V FT L+  +          +L T++ +FG  P+V T N LIN  C 
Sbjct: 569 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 628

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++  ++      + + F+P+ VTY  +++GLCK             M  + +
Sbjct: 629 LRRLGYAFSVLAKL------LKLGFQPDVVTYGTLMNGLCK-------------MITKGI 669

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY SLIH  C+  +W     LL EMV+  + PNVV  + +++ LCK G +  A  
Sbjct: 670 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 729

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++D+M++  V P+  TY  LMDG CL  +++   ++F +M   GC  +  SYNILINGYC
Sbjct: 730 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 789

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + + +++A+ L  ++  +G+    VTYNTL HGL  + + + A+ LF EM  +    D  
Sbjct: 790 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 849

Query: 369 TYRTFIDGLC 378
           TYR  +D LC
Sbjct: 850 TYRILLDYLC 859



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K   +  V +L   +    + PD++T + +++  CK G V+    +
Sbjct: 183 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ +L+ G C  + +  A  +F  +    C  NVI+YNTLING C+
Sbjct: 243 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+EM+           PNTVTY+ +I GLC  G +  A  LF +M     
Sbjct: 303 IQSVDKAMYLFEEMSRQE------LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 356

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L    C     ++A  LL  +      P++     I++ +C+ G++++A  
Sbjct: 357 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 416

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    ++PN +TYN ++ G C  G +    +LF  M   GC  +D +YN++  G+ 
Sbjct: 417 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           +N E    + L  E+  +G    V T  TL  G+      ++++K
Sbjct: 477 RNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVK 520



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 175/431 (40%), Gaps = 59/431 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+         D  + +F  +       ++ +Y+ LIN +CK+  V     +
Sbjct: 253 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN VT+ +LI GLC   R+ +A +LF ++ A G  P+++TY TL + LC+
Sbjct: 313 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A+ L K +   N      + P+   Y+ I+DG+C+ G ++ A++LF  +  + L
Sbjct: 373 NRHLDKAMALLKAIEGSN------WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  +IHG C      EA  L  EM   G  PN  + N+I     +N +      
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL------------------------ 284
           LL+ M+      +  T   L+      G    VK++                        
Sbjct: 487 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLS 546

Query: 285 ----------------------FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
                                 F  M  M        +  L+    K K     LSL  +
Sbjct: 547 SSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQ 606

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC---- 378
           +   GI P V T N L +    +R+   A  +  ++       D  TY T ++GLC    
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMIT 666

Query: 379 --VRPQVRFTY 387
             + P + FTY
Sbjct: 667 KGISPDI-FTY 676



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 174/421 (41%), Gaps = 65/421 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L   L KN+H D  ++L K +      PD+  Y+ +++  C+ G++     +
Sbjct: 358 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNV T+  +I GLC +  + EA+ LF+++   GC PN  TYN +  G  R
Sbjct: 418 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 477

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
               +  + L +EM      +   F  +  T ++++  L  +G                 
Sbjct: 478 NNEALRTIELLEEM------LARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSR 531

Query: 173 ------------------------------VDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                                         +D A   F +M + +  P+ V +T L+   
Sbjct: 532 PSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI 591

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                ++    L  +M   G+ P+V + N+++N  C   ++  A  +L  +++   +P+ 
Sbjct: 592 AKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDV 651

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY TLM+G C              M + G   D F+YN LI+  C   E +   +L NE
Sbjct: 652 VTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 698

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +    I P VV ++T+   L +      A  +   M    V  D  TY   +DG C+R +
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758

Query: 383 V 383
           +
Sbjct: 759 M 759



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 5/159 (3%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D A    + M+     P+   +N L+     T   + +  L   M+S G   D ++  I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +IN  C    V+ A S   ++   G +P   T+ TL  GL    +   AL LF +M G  
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 363 VAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
              +  TY T I+GLC   QV      F+    KG S N
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/302 (44%), Positives = 189/302 (62%), Gaps = 24/302 (7%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            +P++ T   L   LC  +R+ E  A  T +   G  P+++TYNTLI GLCR  H I   
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRV-HRI--- 61

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
                               +V   IIIDGLCK G  D+AKE+F +MK + + PNV++Y+
Sbjct: 62  --------------------SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYS 101

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SL+HGFC A    E+K L  EMVDQGVQPN+V  NV+++ LCK GK+  A +LL++ +Q 
Sbjct: 102 SLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQR 161

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            +  +  TYN+L+DGFC  G ++  ++LF+SM S GC+H++ SY ILINGYCK  +VEEA
Sbjct: 162 GIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEA 221

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++LYNE+P  G +P V TY+TL  GL +  +   A KLF  M+ + ++ D+C Y  F+DG
Sbjct: 222 MNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDG 281

Query: 377 LC 378
           LC
Sbjct: 282 LC 283



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 198/393 (50%), Gaps = 61/393 (15%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV-- 98
           GL PDL+T +IL NC C + +VS G      ILR  + P++VT+ +LIKGLC   RI   
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 99  ---------------EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
                          EA  +F ++KA G  PNVI+Y++L++G C  G    +  LF EM 
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
           +     GV  +PN V ++++ID LCKEG V +AK+L        +  ++VTY SLI GFC
Sbjct: 125 DQ----GV--QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFC 178

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D + A+ L + M  +G + N +S  +++N  CK  K++ A  L + M Q   RPN  
Sbjct: 179 KIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 238

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TY+TL+ G   TGK+    +LF  M++ G   D   Y I ++G CKN  + EA+ L+NEL
Sbjct: 239 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNEL 298

Query: 324 P---FK--------------------------------GIKPTVVTYNTLFHGLFEIRQA 348
               FK                                G++P VVT N + HG   + Q 
Sbjct: 299 KSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQV 358

Query: 349 ERALKLFVEMQG---NDVAADTCTYRTFIDGLC 378
           ++A  LF +M+    N    D  TY T + G C
Sbjct: 359 DKANILFEKMEKMEENGCTPDIITYNTLLRGFC 391



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 44/346 (12%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           I++  L K  H D    +F+ + + G+ P++ +YS L++ FC  G++     +F  ++  
Sbjct: 67  IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAAL-------------------------------- 103
              PN+V F  LI  LC E +++EA  L                                
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186

Query: 104 ---FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              F  + + GCE N I+Y  LING C+      A+NL+ EM        V  +PN  TY
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVKTY 240

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S ++ GL + G V  A +LF  MK   ++ +   Y   + G C      EA  L  E+  
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
              + +  S + +++ LCK GK++ A      + Q  ++PN  T N ++ GFC   ++++
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDK 360

Query: 281 VKELFVSMESM---GCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
              LF  ME M   GC  D  +YN L+ G+C++ ++EE ++L +++
Sbjct: 361 ANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN----------- 231
           M    L+P++ T   L +  C+ N  +E    +  ++ +G  P++V+ N           
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 232 ------VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
                 +I++ LCK G  D A  + + M    + PN  +Y++L+ GFC  GK+   K LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G + +   +N+LI+  CK  +V EA  L      +GI   +VTYN+L  G  +I
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                A KLF+ M       +  +Y   I+G C
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 208/374 (55%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M+P P     F  L G + K KHY T +SL K + S+G+ PD+YT +I+INC C +    
Sbjct: 65  MNPLPRE-KDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTV 123

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
            GF + G + +    P VVTF +LI GLCAE  +  AA     L+  G + N  TY  +I
Sbjct: 124 FGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAII 183

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC+ G T  A+   +++   N ++ VV     + YS I+D LCK+G V +A  LF  M
Sbjct: 184 NGLCKAGDTSGAILYLEKIKGRNCDLDVV-----IAYSTIMDSLCKDGMVCEALNLFSGM 238

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + + P++V Y SLIHG C+   W EA  LL  M+ +G+ PNV + NV+++  CK+G +
Sbjct: 239 TSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMI 298

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  ++  MV   V P+  TYN+++ G CL  ++    ++F  M   G   +  +Y+ L
Sbjct: 299 SRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSL 358

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+CK K + +AL L  E+   G+ P VVT++TL  G  +  + E A +LF  M  +D 
Sbjct: 359 IHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQ 418

Query: 364 AADTCTYRTFIDGL 377
             +  T    +DGL
Sbjct: 419 HPNLQTCAIILDGL 432



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +++ ++  L K+      L+LF  + S G+ PDL  Y+ LI+  C  G+      + G
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R    PNV TF  L+   C +  I  A  +   +   G EP+V+TYN++I+G C   
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ +F+ M +        F PN VTYS +I G CK   ++KA  L  +M    LNP
Sbjct: 332 QMGDAVKVFELMIHKG------FLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNP 385

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT+++LI GFC A     AK L   M +    PN+ +  +I++ L K      A  L 
Sbjct: 386 DVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLF 445

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M + ++  N   YN ++DG C  GK+N  +ELF  + S G K D  +Y  +I G CK 
Sbjct: 446 REMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKE 505

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +++A +L  ++   G  P   TYN    GL +     R+ K  + M+G  ++AD  T 
Sbjct: 506 GLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTT 565

Query: 371 RTFI 374
              I
Sbjct: 566 ELLI 569



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 196/411 (47%), Gaps = 42/411 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L    +          L  +G   + YTY  +IN  CK G  S   + 
Sbjct: 139 PTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILY 198

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             +I  R+C    V+ +++++  LC +  + EA  LF+ + + G +P+++ YN+LI+GLC
Sbjct: 199 LEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLC 258

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK---------- 177
             G    A  L   M       G++  PN  T+++++D  CK+G + +AK          
Sbjct: 259 NFGRWKEATTLLGNMMRK----GIM--PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312

Query: 178 -------------------------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
                                    ++F  M ++   PN+VTY+SLIHG+C   + N+A 
Sbjct: 313 VEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKAL 372

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL EMV+ G+ P+VV+ + ++   CK GK + A  L   M + D  PN  T   ++DG 
Sbjct: 373 FLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGL 432

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                 +    LF  ME M  + +   YNI+++G C   ++ +A  L++ LP KGIK  V
Sbjct: 433 FKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDV 492

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           V Y T+  GL +    + A  L ++M+ N    +  TY  F+ GL  R  +
Sbjct: 493 VAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDI 543



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 6/304 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+L+    K+       ++   +  +G+ PD+ TY+ +I+  C + Q+     +
Sbjct: 280 PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++   F PN+VT++SLI G C    I +A  L  ++   G  P+V+T++TLI G C+
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M   +        PN  T +II+DGL K  F  +A  LF +M+  NL
Sbjct: 400 AGKPEAAKELFCTMHEHDQH------PNLQTCAIILDGLFKCQFHSEAISLFREMEKMNL 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NVV Y  ++ G C     N+A+ L   +  +G++ +VV+   ++  LCK G +D+A  
Sbjct: 454 ELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAEN 513

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PN FTYN  + G      I+R  +  + M+  G   D  +  +LI+ + 
Sbjct: 514 LLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFS 573

Query: 309 KNKE 312
            NKE
Sbjct: 574 ANKE 577



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 125/289 (43%), Gaps = 11/289 (3%)

Query: 99  EAAAL--FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           E AAL  F K+      P    +  L   + +  H    ++L K + +    +G+  KP+
Sbjct: 52  EEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYS----LGI--KPD 105

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T +III+ LC          +   M    ++P VVT+ +LI+G C   +   A     
Sbjct: 106 VYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFAD 165

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV--QCDVRPNAFTYNTLMDGFCL 274
            + D G Q N  +   I+N LCK G    A   L+ +    CD+      Y+T+MD  C 
Sbjct: 166 SLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDV-VIAYSTIMDSLCK 224

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +     LF  M S G + D  +YN LI+G C     +EA +L   +  KGI P V T
Sbjct: 225 DGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQT 284

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +N L     +     RA  +   M    V  D  TY + I G C+  Q+
Sbjct: 285 FNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM 333



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 67/126 (53%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H   P + +  I+L  L K + +   +SLF+ +  + L  ++  Y+I+++  C  G++
Sbjct: 414 HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKL 473

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       +VV +T++IKGLC E  + +A  L  K++  GC PN  TYN  
Sbjct: 474 NDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVF 533

Query: 123 INGLCR 128
           + GL +
Sbjct: 534 VRGLLQ 539


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 218/401 (54%), Gaps = 36/401 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F  L+G + +    D V+SL K++  + +  + Y+++IL+ CFC   ++      
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 69  FGRILRSCF-------------------------------APNVVTFTSLIKGLCAESRI 97
           FG+I +  F                                PNVVTFT+L+ GLC E R+
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRV 198

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           VEA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL ++M   +  I     PN 
Sbjct: 199 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII-----PNV 253

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+ IIDGL K+G    A  LF++M+ + + P++VTY  +I+GFC +  W++A+ LL E
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+++ + P+VV+ + ++N   K GK   A  L D M+   + P+  TY++++DGFC   +
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++  + +F    + GC  D  ++N LI GYC+ K V++ + L +E+   G+    +TY T
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L HG  ++     A  L  EM  + V  +  T  T +DGLC
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 206/426 (48%), Gaps = 52/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K+  +    +LF  +    +FPD+ TY+ +IN FC  G+ S    +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+VVTF++LI     E +  EA  L+ ++      P+ +TY+++I+G C+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  +T   G       P+ +T++ +I G C+   VD   +L  +M    L
Sbjct: 371 QNRLDAAEHMFY-LTPTKG-----CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N +TYT+LIHGFC   D N A+ LL EM+  GV PNVV+ N +++ LC NGK+ +A  
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484

Query: 249 LLDLM---------------VQCDVR-------------------------------PNA 262
           +   M               V+ DV+                               P+ 
Sbjct: 485 MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY++++DG C   +++   ++F SM S     D  ++N LI GYCK   V++ L L+ E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCE 604

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +GI    +TY TL +G  ++   + AL +F EM  + V  DT T R  + GL  + +
Sbjct: 605 MGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 664

Query: 383 VRFTYA 388
           +    A
Sbjct: 665 LERAVA 670



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 199/411 (48%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L +       ++L  R+   GL P+  TY  +++  CKMG       +
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239

Query: 69  FGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             ++   S   PNVV + ++I GL  + R  +A  LF +++     P+++TYN +ING C
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299

Query: 128 RTGHTIVALNLFKEM---------------TNGNGEIGVVFK--------------PNTV 158
            +G    A  L +EM                N   + G  F+              P+TV
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TYS +IDG CK+  +D A+ +F     +  +P+++T+ +LI G+C A   ++   LL EM
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            + G+  N ++   +++  C+ G ++ A  LL  M+   V PN  T NTL+DG C  GK+
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479

Query: 279 NRVKELFVSMESM-----------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
               E+F +M+             G + D  +YNILI G     +  EA  LY E+P +G
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           I P  +TY+++  GL +  + + A ++F  M     + D  T+ T I G C
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+    K   +     L+  +    + P   TYS +I+ FCK  ++     +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F        +P+++TF +LI G C   R+ +   L  ++   G   N ITY TLI+G C+
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    A +L +EM +     GV   PN VT + ++DGLC  G +  A E+F  M+    
Sbjct: 441 VGDLNAAQDLLQEMISS----GVC--PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ + +++ L
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      P+  T+NTL+ G+C  G ++   ELF  M   G   D 
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI G+ K   ++ AL ++ E+   G+ P  +T   +  GL+   + ERA+ +  +
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674

Query: 358 MQ 359
           +Q
Sbjct: 675 LQ 676



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 5/226 (2%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ + +  ++  + + G  D    L  +M+   +  N  ++T L+  FC  +    A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             ++   G  P VV+ N +++ LC     D  S  LDL  Q   +PN  T+ TLM+G C 
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVE---DRISEALDLFHQM-CKPNVVTFTTLMNGLCR 194

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP-FKGIKPTVV 333
            G++     L   M   G + +  +Y  +++G CK  +   AL+L  ++     I P VV
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            YNT+  GL++  +   A  LF+EMQ  ++  D  TY   I+G C+
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCI 300



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF      ++A  L   MV     P+V+    +M  + + G+ D    L   M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +  NA+++  LM  FC   K+      F  +  +G      ++N L++G C    + EAL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L++++     KP VVT+ TL +GL    +   A+ L   M  + +  +  TY T +DG+
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 378 C 378
           C
Sbjct: 228 C 228


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 212/400 (53%), Gaps = 31/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ PD  TY+ +++ +C  GQ       
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVVT++SL+  LC   R  EA  +F  +   G EP++ TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVFK--------PNTV 158
            G  +V ++   ++   NG                      +  +VF         PN V
Sbjct: 354 KG-ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y  +ID LCK G VD A   F QM  E L PN++ YTSLIHG C  + W++A+ L++EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G+  N +  N I++  CK G++  + +L DLMV+  V+P+  TYNTL+DG CL GK+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L  SM S+G K D  +Y  LINGYC+   +++AL+L+ E+   G+ P ++TYN +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF  R+   A +L+V +  +    +  TY   + GLC
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 195/386 (50%), Gaps = 36/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY+ILI C C+ G++ LGF   G +++  F  + +TFT
Sbjct: 72  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC P+V +YN L+ GLC    +  AL L   M +
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD 191

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             +   FK                    P+ VTYS II  LCK   
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQA 251

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + P+ +TY S++HG+C +    EA G L +M   GV+PNVV+ + 
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +MN LCKNG+   A ++ D M +  + P+  TY TL+ G+   G +  +  L   M   G
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D   +NILI  Y K ++V++A+ +++++   G+ P VV Y T+   L +    + A+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
             F +M    +  +   Y + I GLC
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLC 457



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNIL+   AK +  D  + +F ++   GL P++  Y  +I+  CK G V    + 
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN++ +TSLI GLC   +  +A  L  ++   G   N I +N++I+  C+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  I +  LF  M      IGV  KP+ +TY+ +IDG C  G +D+A +L   M    +
Sbjct: 494 EGRVIESEKLFDLMV----RIGV--KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +LI+G+C  +  ++A  L  EMV  GV PN+++ N+I+  L    +   A  
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + +   +    TYN ++ G C     +    +F ++     + +  ++NI+I    
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L+      G+ P V TY+ +   L E    E    LF+ M+ N  +AD+ 
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727

Query: 369 TYRTFIDGLCVRPQV 383
              + +  L  R  +
Sbjct: 728 MLNSIVRKLLQRGDI 742



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 8/243 (3%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+ GC    K  D    L   + S+G+ PD+ TY  LIN +C++ ++     
Sbjct: 514 PDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  ++ S  +PN++T+  +++GL    R   A  L+  +   G +  + TYN +++GLC
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  AL +F+ +   + ++       T T++I+I  L K G +D+AK+LF       
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V TY+ +           E   L + M + G   +    N I+ +L + G +  A 
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 746

Query: 248 RLL 250
             L
Sbjct: 747 TYL 749


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 212/400 (53%), Gaps = 31/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ PD  TY+ +++ +C  GQ       
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVVT++SL+  LC   R  EA  +F  +   G EP++ TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVFK--------PNTV 158
            G  +V ++   ++   NG                      +  +VF         PN V
Sbjct: 354 KG-ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y  +ID LCK G VD A   F QM  E L PN++ YTSLIHG C  + W++A+ L++EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G+  N +  N I++  CK G++  + +L DLMV+  V+P+  TYNTL+DG CL GK+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L  SM S+G K D  +Y  LINGYC+   +++AL+L+ E+   G+ P ++TYN +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF  R+   A +L+V +  +    +  TY   + GLC
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 195/386 (50%), Gaps = 36/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY+ILI C C+ G++ LGF   G +++  F  + +TFT
Sbjct: 72  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC P+V +YN L+ GLC    +  AL L   M +
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD 191

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             +   FK                    P+ VTYS II  LCK   
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQA 251

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + P+ +TY S++HG+C +    EA G L +M   GV+PNVV+ + 
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +MN LCKNG+   A ++ D M +  + P+  TY TL+ G+   G +  +  L   M   G
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D   +NILI  Y K ++V++A+ +++++   G+ P VV Y T+   L +    + A+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
             F +M    +  +   Y + I GLC
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLC 457



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNIL+   AK +  D  + +F ++   GL P++  Y  +I+  CK G V    + 
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN++ +TSLI GLC   +  +A  L  ++   G   N I +N++I+  C+
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  I +  LF  M      IGV  KP+ +TY+ +IDG C  G +D+A +L   M    +
Sbjct: 494 EGRVIESEKLFDLMV----RIGV--KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +LI+G+C  +  ++A  L  EMV  GV PN+++ N+I+  L    +   A  
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + +   +    TYN ++ G C     +    +F ++     + +  ++NI+I    
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L+      G+ P V TY+ +   L E    E    LF+ M+ N  +AD+ 
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727

Query: 369 TYRTFIDGLCVRPQV 383
              + +  L  R  +
Sbjct: 728 MLNSIVRKLLQRGDI 742



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 9/283 (3%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+ GC    K  D    L   + S+G+ PD+ TY  LIN +C++ ++     
Sbjct: 514 PDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  ++ S  +PN++T+  +++GL    R   A  L+  +   G +  + TYN +++GLC
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  AL +F+ +   + ++       T T++I+I  L K G +D+AK+LF       
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V TY+ +           E   L + M + G   +    N I+ +L + G +  A 
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 746

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTG-KINRVKELFVSME 289
             L ++ +      A T + L++   +   +I+R+  L V+++
Sbjct: 747 TYLFMIDEKHFSLEASTASFLLESSPIVWEQISRISHLSVNLK 789


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/409 (35%), Positives = 214/409 (52%), Gaps = 30/409 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PPP+  F  LL  +AK KHY TVLSL K+++S G+ PD+YT +I+IN FC + 
Sbjct: 47  MLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLN 105

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +  +IL+    P+  TFT+L++GLC   +I EA  +F K+   G +PNV+TY 
Sbjct: 106 RVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYG 165

Query: 121 TLINGLCRTGHTIVALNLFKEM-----------------------------TNGNGEIGV 151
           TL+NGLC+      ALNLF EM                             T  N  +  
Sbjct: 166 TLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKS 225

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PN V+ +I++D LCKEG V +A ++   M    + P+VVTY +L+ G C  ++ +EA
Sbjct: 226 KIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEA 285

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +   MV  G   NVVS N ++N  CK  ++D A  L + M + ++ PN  TY+TL+ G
Sbjct: 286 VKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHG 345

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G++     LF  M + G   +  +Y+IL++  CKN  + EA++L   +    + P 
Sbjct: 346 LCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD 405

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           V  YN    G+      E A  LF  +    +  D  T+   I GLC R
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 6/296 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S NI++  L K         +   +   G+ PD+ TY+ L++  C   ++     +
Sbjct: 229 PNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R+    NVV++ +LI G C   RI +A  LF ++      PN +TY+TLI+GLC 
Sbjct: 289 FDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF EM    G+I     PN VTYSI++D LCK   + +A  L   ++  NL
Sbjct: 349 VGRLQDAIALFNEMV-ACGQI-----PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL 402

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V  Y   I G C A D   A+ L   +  +G+QP+V + N+++  LCK G +D AS+
Sbjct: 403 DPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASK 462

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           L   M +     N  TYNT+  G     K +R  +L   M + G   D  +  +L+
Sbjct: 463 LFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 6/240 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N L+    K +  D  + LF+ +    L P+  TYS LI+  C +G++     +F 
Sbjct: 301 VVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFN 360

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PN+VT++ L+  LC   R+ EA AL   ++    +P+V  YN  I+G+CR G
Sbjct: 361 EMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAG 420

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF  +           +P+  T++I+I GLCK G +D+A +LF +M       
Sbjct: 421 DLEAARDLFSNLAPRG------LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLR 474

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  TY ++  G    N  + A  LL EM+ +G   +V ++ +++  L  +G   +  ++L
Sbjct: 475 NGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A      M+     P  F +  L+         + V  L   M+S G   D ++  I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +IN +C    V+ ALS+  ++   G +P   T+ TL  GL  + +   AL +F +M G  
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
              +  TY T ++GLC   Q+
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQL 177



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 41/174 (23%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +NI +  + +    +    LF  L   GL PD++T++I+I               
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI--------------- 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                               +GLC    + EA+ LF ++   GC  N  TYNT+  GL +
Sbjct: 449 --------------------RGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQ 488

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
              T  A+ L +EM      +   F  +  T ++++  L  +G     K++  +
Sbjct: 489 NNKTSRAIQLLEEM------LARGFSADVSTTALLVKMLSDDGLDQSVKQILCE 536


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/389 (35%), Positives = 214/389 (55%), Gaps = 11/389 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  +L  +AK   +D V+ LF ++ ++G+  DLY+++ILI+CFC+  + SL   +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++VT  SL+ G C  +R  EA +L   +   G EPNV+ YNT+INGLC+
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +F  M       G+V   + VTY+ +I GLC  G    A  L   M    +
Sbjct: 733 NRDLNNALEIFYGMEKK----GIV--ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKI 786

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+ +T+LI  F    +  EAK L  EM+ + V PN+++ N ++N  C  G++ +A  
Sbjct: 787 DPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKH 846

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV     P+  TYNTL+ GFC + ++    +LF  M   G   D F+YN LI+GYC
Sbjct: 847 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYC 906

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++  A  ++N +   G+ P +VTYN L   L    + E+AL +  ++Q N +  D  
Sbjct: 907 QAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDII 966

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKG 392
           TY   I G+C   +V+     F    RKG
Sbjct: 967 TYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 209/379 (55%), Gaps = 5/379 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F  LL  +A  + Y+TV+   +++   G+  DLY+++ILI+CFC+  ++SL   I
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P++VTF SL+ G C  +RI +A +L   +   G EPNV+ YNTLI+ LC+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL L  EM    G +      + VTY+ ++ GLC  G   +A  +   M    +
Sbjct: 183 NGDVNIALELLNEMEK-KGRLAA----DLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+V T+T+LI  F    + +EA+ L  +M+   + PN V+ N ++N LC +G++ +A +
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             DLM      PN  TYNTL++GFC + ++    +LF  M   G   D F+YN LI+GYC
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYC 357

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++  A  +++ +   G+ P ++T+  L HGL    +   A+  F +M+  +      
Sbjct: 358 QVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIV 417

Query: 369 TYRTFIDGLCVRPQVRFTY 387
            Y   I GLC   +V   +
Sbjct: 418 AYNIMIHGLCKADKVEEAW 436



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 174/341 (51%), Gaps = 6/341 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  +N ++  L KN+  +  L +F  +   G+  D  TY+ LI+  C  G+ +    +
Sbjct: 718  PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +++    PNV+ FT+LI     E  ++EA  L+ ++      PN++TYN+LING C 
Sbjct: 778  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A ++F  M +        F P+ VTY+ +I G CK   V+   +LF +M ++ L
Sbjct: 838  QGRLGDAKHMFDLMVSKG-----CF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              +  TY +LIHG+C A   N A+ +   MVD GV P++V+ N++++ LC NGK++ A  
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +++ + +  +  +  TYN ++ G C   K+     LF S+   G K D  +Y  +I+G C
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
            +N    EA  L   +   G  P+   Y+      +    AE
Sbjct: 1012 RNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAE 1052



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 42/352 (11%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGL-----------------------------------C 92
           +F  +++S   P+VV FT L+  +                                   C
Sbjct: 52  LFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
             SR+  A ++  K+   G +P+++T+ +L++G C       A +L   M          
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG------ 165

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEA 211
           ++PN V Y+ +ID LCK G V+ A EL  +M K   L  ++VTY +L+ G C++ +W +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L +M  + + P+V +   +++   K G +D A  L   M+Q  + PN  TYN+L++G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C+ G++   K+ F  M S GC  +  +YN LING+CK++ VE+ + L+  +  +G+   
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             TYNTL HG  ++ +   A  +F  M    V  D  T+   + GLCV  ++
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 192/470 (40%), Gaps = 90/470 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K++  +  + LF+R+   GL  D +TY+ LI+ +C++G++ +   I
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 69  FGRILRSCFAPNVVT-----------------------------------FTSLIKGLCA 93
           F  ++     P+++T                                   +  +I GLC 
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG-------N 146
             ++ EA  LF +L   G +P+  TY  +I GLC+ G    A  LF+ M          +
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAED 488

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV-----TYTSLIHG 201
           G +G     N V+   II    +   + ++ +L+       L  ++V       +S + G
Sbjct: 489 GHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKG 548

Query: 202 FC-----------------------------------------HANDWNEAKGLLIEMVD 220
           F                                          H   +++A GL  EM+ 
Sbjct: 549 FVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQ 608

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
               P++V    ++  + K  K D    L   M    +  + +++  L+  FC   + + 
Sbjct: 609 SRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSL 668

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L   M  +G +    +   L+NG+C+    +EA+SL + +   G++P VV YNT+ +
Sbjct: 669 ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           GL + R    AL++F  M+   + AD  TY T I GLC     R+T A R
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLC--NSGRWTDAAR 776



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 31/271 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL  L  +  +     + + +    + PD++T++ LI+ F K G +     ++ ++
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+S   PN VT+ SLI GLC   R+  A   F  + + GC PNV+TYNTLING C++   
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327

Query: 133 IVALNLFKEMTNGNGEIGVVFK------------------------------PNTVTYSI 162
              + LF+ M    G +G  F                               P+ +T+ I
Sbjct: 328 EDGMKLFQRMYR-EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ GLC  G +  A   F  M+       +V Y  +IHG C A+   EA  L   +  +G
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           V+P+  +  +++  LCKNG    A  L   M
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRM 477



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 6/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L  +         F  + S G FP++ TY+ LIN FCK  +V  G  +
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ R     +  T+ +LI G C   ++  A  +F+ + + G  P++IT+  L++GLC 
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+  F +M +G   +G+V       Y+I+I GLCK   V++A ELF ++  E +
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIV------AYNIMIHGLCKADKVEEAWELFCRLPVEGV 447

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            P+  TYT +I G C      EA  L   M + G+
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 36/246 (14%)

Query: 174 DKAKELFLQMKYENLNPNVVTYTS-----------------------------------L 198
           + A +LFL+M      P+VV +T                                    L
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           IH FC  +  + A  +L +M+  G  P++V+   +++  C   ++ +A  L+  MV+   
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEAL 317
            PN   YNTL+D  C  G +N   EL   ME  G    D  +YN L+ G C + E  +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++  + I P V T+  L     +    + A +L+ +M  + +  +T TY + I+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 378 CVRPQV 383
           C+  ++
Sbjct: 287 CMHGRL 292



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 1/185 (0%)

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           GF H+  + +A  L +EMV     P+VV    ++  +    + +        M    +  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + +++  L+  FC   +++    +   M  +G      ++  L++G+C    + +A SL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRTFIDGLCV 379
             +   G +P VV YNTL   L +      AL+L  EM+    +AAD  TY T + GLC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 380 RPQVR 384
             + R
Sbjct: 219 SGEWR 223



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP + ++NILL CL  N   +  L + + L    +  D+ TY+I+I   C+  +V   + 
Sbjct: 927  PPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWC 986

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +F  + R     + + + ++I GLC      EA  L T++K  G  P+   Y+  +    
Sbjct: 987  LFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL---- 1042

Query: 128  RTGHTIVALNLFK 140
            R  +T ++  L K
Sbjct: 1043 RDHYTSLSAELIK 1055


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/384 (37%), Positives = 216/384 (56%), Gaps = 18/384 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +L   AK KHY TV SL  RL   G+ PDL+T +ILINCFC MG
Sbjct: 53  MRH----TPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMG 107

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ VT  +LIKGLC + ++ +A     KL A G + N + Y 
Sbjct: 108 QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYG 167

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLING+C+ G T  A+ L K++       G + KP+ V YS IID LCK   V +A  LF
Sbjct: 168 TLINGVCKIGDTRAAIKLLKKID------GRLTKPDVVMYSTIIDALCKYQLVSEAYGLF 221

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++ +VVTY +LI+GFC      EA GLL  MV + + P+V +  ++++ LCK 
Sbjct: 222 SEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKE 281

Query: 241 GKMDNASR-------LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           GK+  A R       L+D M       +  TY++L+DG C  G ++R   LF  M+  G 
Sbjct: 282 GKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 341

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + + F++ IL++G  K   +++A  ++ +L  KG    V TYN + +G  +    E AL 
Sbjct: 342 RPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 401

Query: 354 LFVEMQGNDVAADTCTYRTFIDGL 377
           +  +M+ N    +  T+ T I  L
Sbjct: 402 MLSKMEDNGCIPNAFTFETIIIAL 425



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 1/265 (0%)

Query: 29  TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
             + L K+++     PD+  YS +I+  CK   VS  + +F  +     + +VVT+ +LI
Sbjct: 181 AAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLI 240

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
            G C   ++ EA  L   +      P+V TY  L++ LC+ G    A      + +   E
Sbjct: 241 YGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDE 300

Query: 149 IGVVFKP-NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           +    +P + +TYS +IDGLCK G +D+A  LF +MK + + PN+ T+T L+ G      
Sbjct: 301 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGR 360

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             +A+ +  +++ +G   NV + NV++N  CK G ++ A  +L  M      PNAFT+ T
Sbjct: 361 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 420

Query: 268 LMDGFCLTGKINRVKELFVSMESMG 292
           ++       + ++ ++L   M + G
Sbjct: 421 IIIALFKKDENDKAEKLLRQMIARG 445



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 3/237 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + ++ I+D   K         L  +++ + + P++ T   LI+ FCH         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +++ +G  P+ V+ N ++  LC  G++  A    D ++    + N   Y TL++G C 
Sbjct: 116 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCK 175

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G      +L   ++    K D   Y+ +I+  CK + V EA  L++E+  KGI   VVT
Sbjct: 176 IGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 235

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           YNTL +G   + + + A+ L   M    +  D  TY   +D LC   +V+   A+R+
Sbjct: 236 YNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVK--EAKRR 290


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 215/377 (57%), Gaps = 7/377 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  MH +PP V  F  +LG LAK KHY T +SL K++   G+ P+L T +ILINCFC +G
Sbjct: 43  MLLMHHTPPIVE-FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLG 101

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+S  F + G+IL+  + PN +T T+L+KGLC +  + ++     K+ A G + N ++Y 
Sbjct: 102 QMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYG 161

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL+NGLC+ G T  A+   + + + +  +      N V Y+ IIDGLCK+  V++A + +
Sbjct: 162 TLLNGLCKIGETRCAIKFLRMIEDSSTGL------NVVMYNTIIDGLCKDKLVNEAYDFY 215

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + PNV+TYT+LI GFC A     A  LL EM+ + + PNV +  ++++ LCK 
Sbjct: 216 SEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKE 275

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A  LL  M       +  TY +L+DGFC    +++   LF+ M+  G + + ++Y
Sbjct: 276 GKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTY 335

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI+G CK   +++A  L+ +L  KG    V TYN +  GL +    + AL +  +M+ 
Sbjct: 336 TALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMED 395

Query: 361 NDVAADTCTYRTFIDGL 377
           N    +  T+   I  L
Sbjct: 396 NGCIPNVVTFEIIIRSL 412



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 114/239 (47%)

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
           NG + +   P  V +  I+  L K      A  L  QM+ + + PN+VT   LI+ FCH 
Sbjct: 41  NGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHL 100

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
              + +  +L +++  G QPN ++   +M  LC  G++  +    D +V    + N  +Y
Sbjct: 101 GQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSY 160

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            TL++G C  G+     +    +E      +   YN +I+G CK+K V EA   Y+E+  
Sbjct: 161 GTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNA 220

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +GI P V+TY TL  G     Q   A  L  EM   ++  +  TY   ID LC   +V+
Sbjct: 221 RGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVK 279



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%)

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +  VD A   F  M   +  P +V +  ++        ++ A  L  +M  +G++PN+V+
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N+++N  C  G+M  +  +L  +++   +PN  T  TLM G CL G++ +       + 
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G + +  SY  L+NG CK  E   A+     +        VV YNT+  GL + +   
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            A   + EM    +  +  TY T I G C+  Q+   ++
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFS 248



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++  LL    KN++ D   +LF ++   G+ P+ YTY+ LI+  CK G++
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRL 348

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      +V T+  +I GLC E  + EA A+ +K++  GC PNV+T+  +
Sbjct: 349 KDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEII 408

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L +      A  L  EM
Sbjct: 409 IRSLFKKDENDKAEKLLHEM 428


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 217/413 (52%), Gaps = 40/413 (9%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI------GLFPDLYTYSILINCFC 57
           +H  P  V + N LL  +++ K   +      R N +       + PD  TYSI+I CFC
Sbjct: 36  LHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFC 95

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNV 116
           ++G++ LGF  FG IL++ +  + +    L+KGLC   R+ EA   L  ++   GC   V
Sbjct: 96  RIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGV 155

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNG----------------NG------------- 147
           ++YNTL+ GLC       A  L   M +G                NG             
Sbjct: 156 VSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSL 215

Query: 148 --EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
             E+GV   P+ VTY+ IIDGLCK   VD+A+++F QM  + + PN VTY ++I G C A
Sbjct: 216 FLEMGV--SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            + + A+G+  +MVD+GV+P+ V+ N I++ LCK   +D A  +   M+   V+P+  TY
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           NT++DG C    I++ + +F  M   G K D+ +Y I+I+G CK + V+ A  ++ ++  
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KG+KP   TYN L HG     Q E  ++   EM  +D+  D  TY   +D LC
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLC 446



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 196/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+        ++ V+   K +++  L PD++TY +L++  CK G+ +    +
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P+V  +  ++ G   +  + E   L   + A G  PN   +NT+I    +
Sbjct: 458 FDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAK 517

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +++F +M            PN VTY  +ID LCK G VD A   F QM  E +
Sbjct: 518 RAMIDEVMHIFIKMKQQG------LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V + SL++G C  + W + + L +EM++QG++P++V  N ++  LCK G++  A R
Sbjct: 572 TPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARR 631

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D MV   ++P+  +YNTL+DG C   +++   +L   M S G K +  SYN L++GYC
Sbjct: 632 LIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++ A  L+ E+  KG+ P V TYNT+ +GLF   +   A +L+V M  +      C
Sbjct: 692 KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751

Query: 369 TYRTFIDGLC 378
           TY   +DG C
Sbjct: 752 TYSIILDGFC 761



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 195/370 (52%), Gaps = 9/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NI++         D   SLF  +   G+ PD+ TY+ +I+  CK  +V     +
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN VT+ ++I GLC    +  A  +F K+   G +P+ +TYNT+I+GLC+
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F++M +         KP+ VTY+ IIDGLCK   +DKA+ +F QM  + +
Sbjct: 308 AQAVDRAEGVFQQMIDRG------VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TYT +I G C A   + A+G+  +M+D+GV+PN  + N +++     G+ +   +
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M   D+ P+ FTY  L+D  C  GK N  + LF SM   G K     Y I+++GY 
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + E   L N +   GI P    +NT+     +    +  + +F++M+   ++ +  
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 369 TYRTFIDGLC 378
           TY T ID LC
Sbjct: 542 TYGTLIDALC 551



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 200/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D    +F+++   G+ P+  TY+ +I+  CK  +V +   +
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+ VT+ ++I GLC    +  A  +F ++   G +P+ +TYNT+I+GLC+
Sbjct: 283 FQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCK 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F++M +         KP+ +TY+IIIDGLCK   VD+A+ +F QM  + +
Sbjct: 343 AQAIDKAEGVFQQMIDKG------VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY  LIHG+     W E    + EM    ++P+V +  ++++ LCKNGK + A  
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M++  ++P+   Y  ++ G+   G ++ + +L   M + G   +   +N +I  Y 
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++E + ++ ++  +G+ P VVTY TL   L ++ + + A+  F +M    V  +  
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576

Query: 369 TYRTFIDGLC 378
            + + + GLC
Sbjct: 577 VFNSLVYGLC 586



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FN ++   AK    D V+ +F ++   GL P++ TY  LI+  CK+G+V    + 
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN V F SL+ GLC   +  +   LF ++   G  P+++ +NT++  LC+
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M      + +  KP+ ++Y+ +IDG C    +D+A +L   M    L
Sbjct: 623 EGRVMEARRLIDSM------VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGL 676

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+V+Y +L+HG+C A   + A  L  EM+ +GV P V + N I+N L ++G+   A  
Sbjct: 677 KPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE 736

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++     +  TY+ ++DGFC     +   ++F S+ SM  + D  ++NI+I+G  
Sbjct: 737 LYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +P  G+ P+VVTY  +   L E    E    LF  M+ +  A ++ 
Sbjct: 797 KGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSH 856

Query: 369 TYRTFIDGLCVRPQV 383
                I  L  R ++
Sbjct: 857 MLNALIRKLLDRGEI 871



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 203/402 (50%), Gaps = 29/402 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++ +LL  L KN   +   SLF  +   G+ P +  Y I+++ + K G +S 
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSE 488

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   ++ +  +PN   F ++I      + I E   +F K+K  G  PNV+TY TLI+
Sbjct: 489 MHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548

Query: 125 GLCRTGHTIVALNLFKEMTN-GNGEIGVVF----------------------------KP 155
            LC+ G    A+  F +M N G     VVF                            +P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V ++ ++  LCKEG V +A+ L   M    L P+V++Y +LI G C A+  +EA  LL
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             MV  G++PN+VS N +++  CK G++DNA  L   M++  V P   TYNT+++G   +
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+ +  +EL+V+M          +Y+I+++G+CKN   +EA  ++  L    ++  ++T+
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           N +  GLF+  + E A+ LF  +  N +     TYR   + L
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 195/414 (47%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L K +  D    +F+++   G+ PD  TY+ +I+  CK   +     +
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGV 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+ +T+T +I GLC    +  A  +F ++   G +PN  TYN LI+G   
Sbjct: 353 FQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLS 412

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG     +   KEM+  +       +P+  TY +++D LCK G  ++A+ LF  M  + +
Sbjct: 413 TGQWEEVVQRIKEMSAHD------LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLL--------------------------------- 215
            P+V  Y  ++HG+      +E   LL                                 
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526

Query: 216 --IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
             I+M  QG+ PNVV+   +++ LCK G++D+A    + M+   V PN   +N+L+ G C
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLC 586

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K  +V+ELF+ M + G + D   +N ++   CK   V EA  L + +   G+KP V+
Sbjct: 587 TVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVI 646

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +YNTL  G     + + A+KL   M    +  +  +Y T + G C   ++   Y
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 192/382 (50%), Gaps = 8/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L K +  D    +F+++   G+ P   TY+ +I+  CK   V     +
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+ VT+ ++I GLC    I +A  +F ++   G +P+ +TY  +I+GLC+
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F++M +         KPN  TY+ +I G    G  ++  +   +M   +L
Sbjct: 378 AQSVDRAEGVFQQMIDKG------VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDL 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY  L+   C     NEA+ L   M+ +G++P+V    ++++   K G +     
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+LMV   + PN   +NT++  +     I+ V  +F+ M+  G   +  +Y  LI+  C
Sbjct: 492 LLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC 551

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V++A+  +N++  +G+ P  V +N+L +GL  + + E+  +LF+EM    +  D  
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
            + T +  LC   + R   ARR
Sbjct: 612 FFNTVLCNLC--KEGRVMEARR 631



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 166/344 (48%), Gaps = 7/344 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN L+  L     ++ V  LF  + + G+ PD+  ++ ++   CK G+V     +   ++
Sbjct: 578 FNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+V+++ +LI G C  SR+ EA  L   + + G +PN+++YNTL++G C+ G   
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF+EM       GV   P   TY+ I++GL + G   +A+EL++ M       ++ 
Sbjct: 698 NAYCLFREMLRK----GVT--PGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY+ ++ GFC  N ++EA  +   +    +Q ++++ N++++ L K G+ ++A  L   +
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+  TY  + +     G +  +  LF  ME  G   +    N LI       E+
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEI 871

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             A +  ++L  K       T + L   LF   + ++  K   E
Sbjct: 872 PRAGAYLSKLDEKNFSLEASTTSMLI-SLFSREEYQQHAKSLPE 914



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 6/317 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN +L  L K         L   +  +GL PD+ +Y+ LI+  C   ++     +
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   PN+V++ +L+ G C   RI  A  LF ++   G  P V TYNT++NGL R
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  L+  M        +       TYSII+DG CK    D+A ++F  +   +L
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSIC------TYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +++T+  +I G        +A  L   +   G+ P+VV+  +I   L + G ++    
Sbjct: 782 QLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDC 841

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M +    PN+   N L+      G+I R       ++      +  + ++LI+ + 
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFS 901

Query: 309 KNKEVEEALSLYNELPF 325
           + +  + A SL  +  F
Sbjct: 902 REEYQQHAKSLPEKCRF 918



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 7/198 (3%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR- 248
           P+  TY+ +I  FC              ++  G + + +  N ++  LC   ++  A   
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF---VSMESMGCKHDDFSYNILIN 305
           LL  M +   R    +YNTL+ G C   +    +EL    V  +   C  D  SYNI+IN
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+    +V++A SL+ E+   G+ P VVTYNT+  GL + ++ +RA  +F +M    V  
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 366 DTCTYRTFIDGLCVRPQV 383
           +  TY T IDGLC   +V
Sbjct: 259 NNVTYNTIIDGLCKAQEV 276



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P+  + ++++   C+ G+++       L+++   R +    N L+ G C T ++    
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 283 E-LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL---PFKGIKPTVVTYNTL 338
             L   M  +GC+    SYN L+ G C  +  EEA  L + +         P VV+YN +
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +G F   Q ++A  LF+EM    V+ D  TY T IDGLC   +V
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCD--VRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +V+    C +      SR   ++  C   V P+  TY+ ++  FC  G++      F  +
Sbjct: 51  SVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLI 110

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALS-LYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
              G + DD   N L+ G C  K V EA+  L  ++P  G +  VV+YNTL  GL + R+
Sbjct: 111 LKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRR 170

Query: 348 AERA---LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           AE A   L + V+ Q +  + D  +Y   I+G     QV   Y+
Sbjct: 171 AEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYS 214


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 212/369 (57%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+  F  +LG L K KHY T +SL +++   G+ P+L T +ILINCFC +GQ++  F +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+IL+  + P+ +T  +L+KGLC +  +  +     K+ A G + N ++Y TL+NGLC+
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+ L + + + +       +P+ V YS IIDGLCK+  V++A + F +M    +
Sbjct: 183 IGETRCAVKLLRMIEDRST------RPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGI 236

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++LI GFC A     A  LL EM+ + + PNV + N++++ LCK GK+  A +
Sbjct: 237 FPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKK 296

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M       +  TYN+++DG C +  +++   LF+ M+  G + + ++Y  LI+G C
Sbjct: 297 LLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLC 356

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++ A  L+  L  KG    V TYN +  GL +    ++AL +  +M+ N    +  
Sbjct: 357 KGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAV 416

Query: 369 TYRTFIDGL 377
           T+   I  L
Sbjct: 417 TFDIIIRSL 425



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 14/324 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N L+  L         L    ++ + G   +  +Y  L+N  CK+G+      +
Sbjct: 133 PDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL 192

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      P+VV ++++I GLC +  + +A   F+++ A G  PNVITY+TLI G C 
Sbjct: 193 LRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCL 252

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A +L  EM   N        PN  TY+I+ID LCKEG V +AK+L  +M ++  
Sbjct: 253 AGQLMGAFSLLNEMILKN------INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY S++ G C + + ++A  L ++M   G+QPN  +   +++ LCK G++ NA +
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQK 366

Query: 249 LLD-LMVQ---CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           L   L+V+    DVR    TYN ++ G C  G  ++   +   ME  GC  +  +++I+I
Sbjct: 367 LFQHLLVKGCCIDVR----TYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIII 422

Query: 305 NGYCKNKEVEEALSLYNELPFKGI 328
               +  E ++A  L + +  KG+
Sbjct: 423 RSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + +  I+  L K      A  L  QM+ + + PN+VT   LI+ FCH      +  +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +++  G QP+ ++ N +M  LC  G++  +    D +V    + N  +Y TL++G C 
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+     +L   +E    + D   Y+ +I+G CK+K V +A   ++E+  +GI P V+T
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           Y+TL  G     Q   A  L  EM   ++  +  TY   ID LC   +V+
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVK 292



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%)

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           E  VD     F ++      P ++ +  ++        +  A  L  +M  +G++PN+V+
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N+++N  C  G+M  +  +L  +++   +P+  T NTLM G CL G++ R       + 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G + +  SY  L+NG CK  E   A+ L   +  +  +P VV Y+T+  GL + +   
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           +A   F EM    +  +  TY T I G C+  Q+   ++
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFS 261



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++N +L  L K+++ D   +LF ++   G+ P+ YTY+ LI+  CK G++
Sbjct: 302 HHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRL 361

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      +V T+  +I GLC E    +A A+ +K++  GC PN +T++ +
Sbjct: 362 KNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDII 421

Query: 123 INGL 126
           I  L
Sbjct: 422 IRSL 425


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 210/377 (55%), Gaps = 17/377 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F  L+G + +    D V+SL +++    +  + Y+++IL+ CFC   ++      
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG+I +  F P VVTF++L+ GLC E RI EA  LF ++    C+PNV+T+ TL+NGLCR
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 191

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YEN 187
            G  + A+ L   M           +PN +TY  I+DG+CK G    A  L  +M+   +
Sbjct: 192 EGRVVEAVALLDRMLEDG------LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 245

Query: 188 LNPNVVTY-----TSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNG 241
           + PNVV +     T +I+GFC +  W+EA+ LL EM++ + + P+VV+ N ++N   K G
Sbjct: 246 IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG 305

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K   A  L D M+   + P+  TY++++DGFC   +++  + +F  M + GC  D  ++N
Sbjct: 306 KFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFN 365

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI GYC+ K V++ + L +E+   G+    +TY TL HG  ++     A  L  EM  +
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425

Query: 362 DVAADTCTYRTFIDGLC 378
            V  +  T  T +DGLC
Sbjct: 426 GVCPNVVTCNTLLDGLC 442



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 213/428 (49%), Gaps = 51/428 (11%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
            M   P    SF IL+ C          LS F ++  +G  P + T+S L++  C   ++
Sbjct: 105 EMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRI 164

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S    +F ++ +    PNVVTFT+L+ GLC E R+VEA AL  ++   G +PN ITY T+
Sbjct: 165 SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 220

Query: 123 INGLCRTGHTIVALNLFKEMT---------------------NGNGEIGVV--------- 152
           ++G+C+ G T+ ALNL ++M                      NG    G           
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280

Query: 153 ------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   P+ VTY+ +I+   KEG   +A+EL+ +M    + P+ +TY+S+I GFC  N
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             + A+ +   M  +G  P++++ N ++   C+  ++D+  +LL  M +  +  N  TY 
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL--- 323
           TL+ GFC  G +N  ++L   M S G   +  + N L++G C N ++++AL ++  +   
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460

Query: 324 --------PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
                   PF G++P V TYN L  GL    +   A +L+ EM    +  DT TY + I 
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIH 520

Query: 376 GLCVRPQV 383
           GLC + ++
Sbjct: 521 GLCKQSRL 528



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 186/356 (52%), Gaps = 17/356 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+ TY+ LIN F K G+      ++  +L     P+ +T++S+I G C ++R+  A  +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   GC P++IT+NTLI G CR       + L  EMT    E G+V   NT+TY+ +
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLV--ANTITYTTL 402

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM----- 218
           I G C+ G ++ A++L  +M    + PNVVT  +L+ G C      +A  +   M     
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462

Query: 219 -VDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +D      GV+P+V + N++++ L   GK   A  L + M    + P+  TYN+++ G 
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +++   ++F SM S     +  ++  LINGYCK   V++ L L+ E+  +GI    
Sbjct: 523 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 582

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           +TY TL HG  ++     AL +F EM  + V  DT T R  + GL  + +++   A
Sbjct: 583 ITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVA 638



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   +     L+  +   G+ P   TYS +I+ FCK  ++     +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+++TF +LI G C   R+ +   L  ++   G   N ITY TLI+G C+
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
            G    A +L +EM +     GV   PN VT + ++DGLC  G +  A E+F  M+    
Sbjct: 409 VGDLNAAQDLLQEMVSS----GVC--PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462

Query: 185 -------YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                  +  + P+V TY  LI G  +   + EA+ L  EM  +G+ P+ ++ N +++ L
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A+++ D M      PN  T+ TL++G+C  G+++   ELF  M   G   + 
Sbjct: 523 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 582

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G+ K   +  AL ++ E+   G+ P  +T   +  GL+   + +RA+ +  +
Sbjct: 583 ITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLED 642

Query: 358 MQ 359
           +Q
Sbjct: 643 LQ 644



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L  GF       +A  L  +MV     P+V+    +M  + + G++D    L   M    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V  NA+++  LM  FC   K+      F  +  +G      +++ L++G C    + EAL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L++++     KP VVT+ TL +GL    +   A+ L   M  + +  +  TY T +DG+
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 378 C 378
           C
Sbjct: 225 C 225


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  251 bits (641), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L+K +  D    +  R+   G  P+  T++ L++ +C  G+ +    +
Sbjct: 236 PDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGV 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ R    P+V T+ +L+  LC   R +EA  +F  +   G +PN  TY TL++G   
Sbjct: 296 FKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355

Query: 129 TGHTIVALNLFKEMT-NG--------NGEIGVVFK--------------------PNTVT 159
            G  +   +L   M  NG        N  IG   K                    P+TVT
Sbjct: 356 EGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVT 415

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y I++D LC  G VD A   F ++  E L P+ V + +LIHG C  + W++A+ L +EM+
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ PN +  N ++N LCK G +  A  + DLMV+ DV+ +  TYNTL+DG+CL GK++
Sbjct: 476 GRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVD 535

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L   M   G K ++ +YN +INGYCKN  +E+A SL+ ++  KG+ P +VTY+T+ 
Sbjct: 536 EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L++ M  + +  D  TY   + GLC
Sbjct: 596 QGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLC 634



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 211/417 (50%), Gaps = 42/417 (10%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQV 62
           P+   +   N  L   A++      +SLF+R+  +    + P+L TYS++I+C  ++G +
Sbjct: 49  PTTSSIVDLNRALSDAARHSPA-VAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHL 107

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNT 121
            L F   GR++RS +    +TF+ L+K LC + R  EA  +   ++   GC PNV +Y  
Sbjct: 108 DLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTI 167

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF-VDKAKELF 180
           L+ GLC    +  AL+L   M   +   G  + P+ V+Y+ +I+GL +EG  +D A  LF
Sbjct: 168 LLKGLCDENRSQQALHLLHTMMVADDTRGG-YPPDVVSYNTVINGLLREGRQLDTAYHLF 226

Query: 181 LQMKYENLNPNVVTYTS-----------------------------------LIHGFCHA 205
            QM  + L+P+VVTY S                                   L+HG+C +
Sbjct: 227 DQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSS 286

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
              N+A G+   M   GV+P+V + N +M  LCKNG+   A ++ D MV+   +PN+ TY
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATY 346

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            TL+ G+   G + ++  L   M   G + D + +NILI  Y K+ +V++A+ L++++  
Sbjct: 347 GTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRR 406

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +G+ P  VTY  +   L  + + + A+  F  +    +  D   +R  I GLC R +
Sbjct: 407 QGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK 463



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 193/391 (49%), Gaps = 9/391 (2%)

Query: 8   PPPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PP V S+N ++ G L + +  DT   LF ++   GL PD+ TY+ +I+   K   +    
Sbjct: 199 PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAA 258

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           V+  R++++   PN +T  SL+ G C+  +  +A  +F ++   G EP+V TYNTL+  L
Sbjct: 259 VVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYL 318

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G ++ A  +F  M           KPN+ TY  ++ G   EG + K   L   M   
Sbjct: 319 CKNGRSMEARKIFDSMVKRG------HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRN 372

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+   +  LI  +      ++A  L  +M  QG+ P+ V+  ++M+ LC  GK+D+A
Sbjct: 373 GIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDA 432

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                 ++   + P+A  +  L+ G C   K ++ +EL V M   G   ++  +N L+N 
Sbjct: 433 MAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNH 492

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   V  A ++++ +    ++  V+TYNTL  G     + + A KL   M  + V  +
Sbjct: 493 LCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552

Query: 367 TCTYRTFIDGLCV--RPQVRFTYARRKGNSG 395
             TY T I+G C   R +  F+  R+  + G
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 187/371 (50%), Gaps = 6/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+G   K+   D  + LF ++   GL PD  TY I+++  C +G+V      FGR++
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+ V F +LI GLCA  +  +A  L  ++   G  PN I +NTL+N LC+ G   
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A N+F  M      + V  + + +TY+ +IDG C  G VD+A +L   M  + + PN V
Sbjct: 501 RAKNIFDLM------VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I+G+C      +A  L  +M  +GV P +V+ + I+  L +  +   A  L   M
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++  ++ +  TYN ++ G C     +    +F ++  +    ++ ++NI+I+   K    
Sbjct: 615 IKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRH 674

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA  L+  L  +G+ P VVTY  +   L E    E    LF+ ++ N   A++      
Sbjct: 675 DEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNAL 734

Query: 374 IDGLCVRPQVR 384
           +  L  + +VR
Sbjct: 735 VGKLLQKGEVR 745


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 202/369 (54%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN+L G +AK KHY T +SL K ++ IG+ P++ T++I+INC C++     GF +
Sbjct: 24  PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSV 83

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + +    P++VTFT+++ GLC E  + +A      LK  G E +  T   +INGLC+
Sbjct: 84  LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 143

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH+  AL+  K+M   N  + V        YS ++DGLCK+G V +A +LF QM  + +
Sbjct: 144 VGHSSAALSYLKKMEEQNCNLDVT------AYSAVVDGLCKDGMVFEALDLFSQMTGKGI 197

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY  LIHG C+ + W EA  LL  M+ +G+ P+V + NVI     K G +  A  
Sbjct: 198 QPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKS 257

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M    +  N  TYN+++   C+  ++    E+F  M   GC  +  +YN LI+G+C
Sbjct: 258 IFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWC 317

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + K + +A+    E+   G+ P VVT++TL  G  +  +   A +LF  M  +    D  
Sbjct: 318 ETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQ 377

Query: 369 TYRTFIDGL 377
           T    +DGL
Sbjct: 378 TCAIILDGL 386



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 181/363 (49%), Gaps = 6/363 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K  H    LS  K++       D+  YS +++  CK G V     +F ++      PN
Sbjct: 141 LCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPN 200

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           + T+  LI GLC   R  EAA L   +   G  P+V T+N +     +TG    A ++F 
Sbjct: 201 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFS 260

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            M    G +G+  + N VTY+ II   C    +  A E+F  M  +   PN+VTY SLIH
Sbjct: 261 FM----GHMGI--EHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIH 314

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+C   + N+A   L EMV+ G+ P+VV+ + ++   CK GK   A  L  +M +    P
Sbjct: 315 GWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLP 374

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  T   ++DG       +    LF  +E M    D   Y+I++NG C + ++ +AL L+
Sbjct: 375 DLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELF 434

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           + L  KG+K  VVTYN + +GL +    + A  L ++M+ N    D CTY  F+ GL  R
Sbjct: 435 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRR 494

Query: 381 PQV 383
            ++
Sbjct: 495 YEI 497



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 172/349 (49%), Gaps = 7/349 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L     +     L   +   G+ PD+ T++++   F K G +S    I
Sbjct: 199 PNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSI 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       NVVT+ S+I   C  +++ +A  +F  +   GC PN++TYN+LI+G C 
Sbjct: 259 FSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCE 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +   A+    EM N NG       P+ VT+S +I G CK G    AKELF  M     
Sbjct: 319 TKNMNKAMYFLGEMVN-NG-----LDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQ 372

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T   ++ G    +  +EA  L  E+       +++  ++I+N +C +GK+++A  
Sbjct: 373 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALE 432

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    V+ +  TYN +++G C  G ++  ++L + ME  GC  D+ +YN+ + G  
Sbjct: 433 LFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           +  E+ ++      +  KG +    T   L +  F   +  RA ++F++
Sbjct: 493 RRYEISKSTKYLMFMKGKGFRANATTTKLLIN-YFSANKENRAFQVFLQ 540



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 11/284 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P V  +N L   + +  H   A++L K M+     IGV  KPN  T++I+I+ LC+    
Sbjct: 24  PCVKDFNLLFGIVAKMKHYTTAISLIKHMS----YIGV--KPNVSTHNIVINCLCRLNHT 77

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                +   M    + P++VT+T++++G C   +  +A   +  + D G + +  +   I
Sbjct: 78  VFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAI 137

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N LCK G    A   L  M + +   +   Y+ ++DG C  G +    +LF  M   G 
Sbjct: 138 INGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGI 197

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + + F+YN LI+G C     +EA  L   +  KGI P V T+N +     +     RA  
Sbjct: 198 QPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKS 257

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
           +F  M    +  +  TY + I   C+  Q++     F    RKG
Sbjct: 258 IFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKG 301



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H   P + +  I+L  L K   +   +SLF+ L  +    D+  YSI++N  C  G++
Sbjct: 368 HKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKL 427

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       +VVT+  +I GLC E  + +A  L  K++  GC P+  TYN  
Sbjct: 428 NDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVF 487

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC--KEGFVDKAKELF 180
           + GL R  + I     +     G G     F+ N  T  ++I+     KE   ++A ++F
Sbjct: 488 VQGLLRR-YEISKSTKYLMFMKGKG-----FRANATTTKLLINYFSANKE---NRAFQVF 538

Query: 181 LQ 182
           LQ
Sbjct: 539 LQ 540


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 207/363 (57%), Gaps = 7/363 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           ++ G L+  K +  V+ + + +++ GL PD   Y++L++  CK G+ +    IF  ++R 
Sbjct: 243 LIHGYLSTGK-WKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRK 301

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              P+V  +  L+ G   E  + E  +    +   G  P+   +N + N   +      A
Sbjct: 302 GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEA 361

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           +++F +M            P  V Y  +ID LCK G VD A   F QM  E + P++  +
Sbjct: 362 MHIFDKMRQQ------WLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVF 415

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           +SL++G C  + W +A+ L  E++DQG++ N    N++M  LC+ G++  A RL+DLM++
Sbjct: 416 SSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLR 475

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
            DVRP+  +YNTL+DG CLTG+I+   +L   M S+G K D+F+YN L++GYCK + +++
Sbjct: 476 VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A SL+ E+  KG+ P VVTYNT+ HGLF+I +   A +L++ M  N    D  TY   ++
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595

Query: 376 GLC 378
           GLC
Sbjct: 596 GLC 598



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 205/383 (53%), Gaps = 13/383 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNK---HYDTVLSLFKRLN---SIGLFPDLYTYSILINCFCK 58
           +  P  V +FN LL  +++ +     + V+SLF R+    S+ + P   TY+ILI CFC+
Sbjct: 45  YARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCR 104

Query: 59  MGQVSLGFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNV 116
           MG++  GF  FG IL++ ++  N V F  L+KGLC   R+ EA   L  ++  FGC  NV
Sbjct: 105 MGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNV 164

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           I+YN L+ GLC       AL L   M + G+G       PN VTY+ +IDGLCK   VD+
Sbjct: 165 ISYNILLKGLCNEKRAEEALELMHMMADDGDGS----HTPNVVTYTTVIDGLCKAQMVDR 220

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           AK +F  M  + + PN  TYT LIHG+     W E   +L EM   G+QP+ V   V+++
Sbjct: 221 AKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLD 280

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCKNG+   A  + D +++  ++P+   Y  L+ G+   G ++ +      M   G   
Sbjct: 281 YLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSP 340

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D   +NI+ N Y K   ++EA+ +++++  + + P VV Y  L   L ++ + + A+  F
Sbjct: 341 DHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKF 400

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
            +M    V  D   + + + GLC
Sbjct: 401 NQMINEGVTPDIFVFSSLVYGLC 423



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 181/375 (48%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI+    AK    D  + +F ++    L P +  Y  LI+  CK+G+V    + 
Sbjct: 340 PDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLK 399

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P++  F+SL+ GLC   +  +A  LF ++   G   N   +N L+  LCR
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR 459

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M      + V  +P+ ++Y+ ++DG C  G +D+A +L   M    L
Sbjct: 460 EGRVMEAQRLIDLM------LRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGL 513

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +L+HG+C A   ++A  L  EM+ +G+ P VV+ N I++ L + G+   A  
Sbjct: 514 KPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+    + + +TY  +++G C    ++   ++F S+ S   + D F+ NI+I    
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALL 633

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +   G+ P V TY  +   L +    E   +LF  M+ N  A ++ 
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R  +
Sbjct: 694 MLNALVRWLLHRGDI 708



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 189/408 (46%), Gaps = 41/408 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    + +LL  L KN       ++F  L   G+ P +  Y IL++ +   G +S 
Sbjct: 266 HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSE 325

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
                  ++R+  +P+   F  +      ++ I EA  +F K++     P V+ Y  LI+
Sbjct: 326 MHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+ G    A+  F +M N     GV   P+   +S ++ GLC     +KA++LF ++ 
Sbjct: 386 ALCKLGRVDDAVLKFNQMINE----GVT--PDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + +  N   +  L+   C      EA+ L+  M+   V+P+V+S N +++  C  G++D
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN------------------------- 279
            A++LLD+MV   ++P+ FTYNTL+ G+C   +I+                         
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559

Query: 280 ----------RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
                       KEL+++M +   K D ++Y I++NG C+N  V+EA  ++  L  K ++
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQ 619

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             + T N +   L +  + E A+ LF  +    +  D  TYR   + L
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENL 667



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 6/312 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+  L +         L   +  + + PD+ +Y+ L++  C  G++     +   ++
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+  T+ +L+ G C   RI +A +LF ++   G  P V+TYNT+++GL + G   
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L+  M N         K +  TY+II++GLC+  FVD+A ++F  +  ++L  ++ 
Sbjct: 570 EAKELYLNMINNRR------KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIF 623

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T   +I          +A  L   +   G+ P+V +  +I   L K G ++    L   M
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    PN+   N L+      G I R       ++      +  + ++LI+ Y + +  
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQ 743

Query: 314 EEALSLYNELPF 325
           + A SL  +  F
Sbjct: 744 QLAKSLPEKYRF 755



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++G L K    +  + LF  +++ GL PD+ TY ++     K G +     +F  +
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTG 130
             +  APN     +L++ L     I  A    +KL  K F  E +  T + LI+   R  
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEAS--TTSMLISIYSRAE 741

Query: 131 HTIVALNL 138
           +  +A +L
Sbjct: 742 YQQLAKSL 749


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/377 (38%), Positives = 212/377 (56%), Gaps = 9/377 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKM 59
           M H+HP PP + S N LL  + K KHY TV+SL   L+S G   P L T SI IN    +
Sbjct: 46  MLHLHP-PPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHL 104

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           GQ+ L F +  +I++  F  +  T T+L+KGLC + R  EA  L+    + G   + + Y
Sbjct: 105 GQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCY 164

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            TLINGLC+ G T  A+ L ++M  G        +PN + Y++++DGLCKEG V +A  L
Sbjct: 165 GTLINGLCKMGKTRDAIELLRKMEKGG------VRPNLIMYNMVVDGLCKEGLVTEACGL 218

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELC 238
             +M  + +  +V TY SLIHGFC A  +  A  LL EMV  + V+P+V + N++++ LC
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALC 278

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G +  A  +  LM++  + P+  + N LM+G+CL G ++  KE+F  M   G   +  
Sbjct: 279 KLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVI 338

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ LINGYCK K V+EAL L  E+  + + P  VTYN L  GL +  +      L   M
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAM 398

Query: 359 QGNDVAADTCTYRTFID 375
           + +  A D  TY   +D
Sbjct: 399 RASGQAPDLITYNVLLD 415



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 7/337 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N+++  L K         L   +   G+  D++TY+ LI+ FC  GQ      +
Sbjct: 194 PNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRL 253

Query: 69  FGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
               +++    P+V TF  L+  LC    + EA  +F  +   G EP+V++ N L+NG C
Sbjct: 254 LNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC 313

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  +F  M    G++     PN ++YS +I+G CK   VD+A  L  +M   N
Sbjct: 314 LRGCMSEAKEVFDRMVE-RGKL-----PNVISYSTLINGYCKVKMVDEALRLLTEMHQRN 367

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VTY  L+ G   +        L+  M   G  P++++ NV++++  K   +D A 
Sbjct: 368 LVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKAL 427

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   +V   + PN  TYN L+DG C  G++   KE+F  +   GC+ +  +YNI+ING 
Sbjct: 428 ALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGL 487

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            +   ++EA +L  E+   G  P  VT++ L   L E
Sbjct: 488 RREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 6/162 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N LL  L+K+        L + + + G  PDL TY++L++ + K   +     +
Sbjct: 370 PDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALAL 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  I+ +  +PN+ T+  LI GLC   R+  A  +F  L   GC PN+ TYN +INGL R
Sbjct: 430 FQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
            G    A  L  EM +        F PN VT+  ++  L ++
Sbjct: 490 EGLLDEAEALLLEMVDDG------FPPNAVTFDPLVRALLEK 525


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 210/374 (56%), Gaps = 11/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQVSLGFV 67
           P +  FN+L G +AK++HY T +SL K L+S+G    D+ T +I INC C M + +LGF 
Sbjct: 72  PCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFA 131

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G + +    P +VT  +++ GLC E  +  A  L  K++  G   N  TY  L+NGLC
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  AL   K+M   N        PN V Y+ I+DGLCK G V +A  L  +M   N
Sbjct: 192 KIGDTSGALECLKKMVKRN------LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVN 245

Query: 188 LNPNVVTYTSLIHGFC-HANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDN 245
           + PNVVTY  LI G C     W E  GL  EMV ++G+ P+V + +++++  CK G +  
Sbjct: 246 VEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLR 305

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNIL 303
           A  ++  MV+  V PN  TYN+L+ G+CL  ++     +F  M  E  GC     ++N L
Sbjct: 306 AESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSL 365

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+CK KEV++A+SL +E+  KG+ P V T+ +L  G  E+++   A +LF  M+ +  
Sbjct: 366 IHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQ 425

Query: 364 AADTCTYRTFIDGL 377
             +  T    +DGL
Sbjct: 426 VPNLQTCAVVLDGL 439



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 174/369 (47%), Gaps = 8/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC-KMGQVSLGFV 67
           P V  +N +L  L K       L L   +  + + P++ TY+ LI   C + G    G  
Sbjct: 213 PNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVG 272

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +F  ++      P+V TF+ L+ G C E  ++ A ++   +   G EPNV+TYN+LI G 
Sbjct: 273 LFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGY 332

Query: 127 CRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           C       A+ +F  M   G G +     P+ VT++ +I G CK   VDKA  L  +M  
Sbjct: 333 CLRSQMEEAMRVFGLMVREGEGCL-----PSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG 387

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L+P+V T+TSLI GFC       A+ L   M + G  PN+ +  V+++ L K      
Sbjct: 388 KGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSE 447

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M++  +  +   YN ++DG C  GK+N  ++L   +   G K D ++YNI+I 
Sbjct: 448 AVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIK 507

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +++A  L  ++   G  P   +YN    GL       R+ K    M+      
Sbjct: 508 GLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPV 567

Query: 366 DTCTYRTFI 374
           D  T    I
Sbjct: 568 DATTAELLI 576



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 186/407 (45%), Gaps = 43/407 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N ++  L      +  L L +++ ++G   +  TY  L+N  CK+G  S     
Sbjct: 143 PTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALEC 202

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
             ++++    PNVV + +++ GLC    + EA  L  ++     EPNV+TYN LI GLC 
Sbjct: 203 LKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCG 262

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G     + LF EM     E G+V  P+  T+SI++DG CKEG + +A+ +   M    
Sbjct: 263 EFGGWREGVGLFNEMV---AEKGIV--PDVQTFSILVDGFCKEGLLLRAESVVGFMVRIG 317

Query: 188 LNPNVVTYTSL-------------------------------------IHGFCHANDWNE 210
           + PNVVTY SL                                     IHG+C   + ++
Sbjct: 318 VEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDK 377

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LL EMV +G+ P+V +   ++   C+  K   A  L   M +    PN  T   ++D
Sbjct: 378 AMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLD 437

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G       +    LF +M   G   D   YNI+++G CK  ++ +A  L + +  KG+K 
Sbjct: 438 GLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKI 497

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              TYN +  GL      + A +L  +M+ N    + C+Y  F+ GL
Sbjct: 498 DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGL 544



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 181/354 (51%), Gaps = 11/354 (3%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++N L+ G   +   +   + LF  +    G+ PD+ T+SIL++ FCK G +    
Sbjct: 248 PNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAE 307

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLIN 124
            + G ++R    PNVVT+ SLI G C  S++ EA  +F  +  +  GC P+V+T+N+LI+
Sbjct: 308 SVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIH 367

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+      A++L  EM      +G    P+  T++ +I G C+      A+ELF  MK
Sbjct: 368 GWCKVKEVDKAMSLLSEM------VGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK 421

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PN+ T   ++ G       +EA  L   M+  G+  ++V  N++++ +CK GK++
Sbjct: 422 EHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLN 481

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A +LL  ++   ++ +++TYN ++ G C  G ++  +EL   M+  GC  +  SYN+ +
Sbjct: 482 DARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 541

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            G  +  ++  +      +  KG  P   T   L        + +++ K F ++
Sbjct: 542 QGLLRKYDIARSRKYLQIMKDKGF-PVDATTAELLIRFLSANEEDKSFKEFPQI 594



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 196/436 (44%), Gaps = 94/436 (21%)

Query: 5   HP---SPPPVSSF---NILLGCLAKNKHYDTVLSL--FKRLNSIGLFPDLYTYSILINCF 56
           HP   SPPP+S      +LL  +   +  D V+++  F R+ ++  FP +  +++L    
Sbjct: 25  HPFSTSPPPISDAAHRTLLLNSIRTLETADAVVAVDFFHRMLTLTPFPCIQDFNLL---- 80

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
                       FG + +S      ++   ++  L   S                   +V
Sbjct: 81  ------------FGLVAKSQHYATAISLIKILHSLGDGS------------------ADV 110

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            T N  IN LC    T +   +   MT    +IG+  +P  VT + I++GLC EG V+ A
Sbjct: 111 CTLNIAINCLCHMRKTTLGFAVLGLMT----KIGL--EPTLVTLNTIVNGLCIEGDVNHA 164

Query: 177 KELFLQMKYENL--NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
             L+L  K ENL  + N  TY +L++G C   D + A   L +MV + + PNVV  N I+
Sbjct: 165 --LWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAIL 222

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYN---------------------------- 266
           + LCK G +  A  LL  M   +V PN  TYN                            
Sbjct: 223 DGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKG 282

Query: 267 ---------TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
                     L+DGFC  G + R + +   M  +G + +  +YN LI GYC   ++EEA+
Sbjct: 283 IVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAM 342

Query: 318 SLYNEL--PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
            ++  +    +G  P+VVT+N+L HG  ++++ ++A+ L  EM G  +  D  T+ + I 
Sbjct: 343 RVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIG 402

Query: 376 GLCVRPQVRFTYARRK 391
           G C   +V+   A R+
Sbjct: 403 GFC---EVKKPLAARE 415



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + +  ++L  L K       ++LF+ +   GL  D+  Y+I+++  CKMG+++ 
Sbjct: 423 HGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLND 482

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +L      +  T+  +IKGLC E  + +A  L  K+K  GC PN  +YN  + 
Sbjct: 483 ARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQ 542

Query: 125 GLCR 128
           GL R
Sbjct: 543 GLLR 546


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 223/397 (56%), Gaps = 25/397 (6%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  MHP P  +  F  +LG +AK ++Y T + L+  +   G+ P   T++ILINCFC MG
Sbjct: 45  MVDMHPLPS-IVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMG 103

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F + G+IL+    PNVVTFT+L+KG C   ++++A  ++ ++ A     + + Y 
Sbjct: 104 QMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYG 163

Query: 121 TLINGLCRT--GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           TLINGLC++  G    A+ L ++M     E   + KPN + Y+ ++ GLCK+G +++A+ 
Sbjct: 164 TLINGLCKSKIGKPRAAVQLLQKM-----EERQLVKPNLIMYNTVVHGLCKDGNINEARV 218

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHA----------------NDWNEAKGLLIEMVDQG 222
           L  +M  + + P++ TY+SLI+G C A                N  +EA+ L   M+++G
Sbjct: 219 LCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERG 278

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            Q ++++ N++MN  C N K+  A +L  +MV+   +P+  TY  LM G+CL  K++  +
Sbjct: 279 EQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEAR 338

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF  M   G   D +SYNILI GYCK + V EA++L  ++  K + P ++TYN++  GL
Sbjct: 339 NLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGL 398

Query: 343 FEIRQAERALKLFVEMQ-GNDVAADTCTYRTFIDGLC 378
            +      A KL  EM        D  TY   ++ LC
Sbjct: 399 CKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLC 435



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 27/371 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N ++  L K+ + +    L  ++   G+FPD++TYS LI   C+ GQ       
Sbjct: 195 PNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRK----- 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                           TSL+ G C  +++ EA  LF  +   G + ++I YN L+NG C 
Sbjct: 250 --------------EVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCL 295

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  M    GE     +P+T+TY+I++ G C    VD+A+ LF  M    L
Sbjct: 296 NNKVGEARKLFHMMVE-RGE-----QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGL 349

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V +Y  LI G+C      EA  LL +M  + + PN+++ N +++ LCK+G + +A +
Sbjct: 350 VPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWK 409

Query: 249 LLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-SMGCKHDDFSYNILING 306
           L+D M  C    P+  TYN L++  C    + +    F  +        + +SYNILI+G
Sbjct: 410 LVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISG 469

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CKN+ ++EA++L+N + FK + P +VTYN L   LF  +Q ++A+ L V++    ++ +
Sbjct: 470 CCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPN 529

Query: 367 TCTYRTFIDGL 377
             TY   I+GL
Sbjct: 530 LRTYNILINGL 540



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 8/321 (2%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL     N   D    LF  +   G   D+  Y+IL+N +C   +V     +F  ++   
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ +T+T L+ G C   ++ EA  LF  +   G  P+V +YN LI G C+      A+
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTY 195
           NL ++M   N        PN +TY+ ++DGLCK G +  A +L  +M Y     P+V TY
Sbjct: 374 NLLEDMFLKN------LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTY 427

Query: 196 TSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
             L+   C      +A      ++ ++   PNV S N++++  CKN ++D A  L + M 
Sbjct: 428 NILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMC 487

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
             ++ P+  TYN L+D      ++++   L V +   G   +  +YNILING  K    +
Sbjct: 488 FKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPK 547

Query: 315 EALSLYNELPFKGIKPTVVTY 335
            A  +   L  +G  P V TY
Sbjct: 548 TAQKISLYLSIRGYHPDVKTY 568



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 134/259 (51%), Gaps = 8/259 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+         D   +LF  +   GL PD+++Y+ILI  +CK  +V     +
Sbjct: 316 PDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNL 375

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--NVITYNTLINGL 126
              +      PN++T+ S++ GLC    I++A  L  ++  + C+P  +V TYN L+  L
Sbjct: 376 LEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMH-YCCQPPPDVTTYNILLESL 434

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR      A+  FK +          F PN  +Y+I+I G CK   +D+A  LF  M ++
Sbjct: 435 CRIECVEKAIAFFKHLIFERS-----FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFK 489

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           NL P++VTY  L+    +    ++A  LL+++VDQG+ PN+ + N+++N L K G+   A
Sbjct: 490 NLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTA 549

Query: 247 SRLLDLMVQCDVRPNAFTY 265
            ++   +      P+  TY
Sbjct: 550 QKISLYLSIRGYHPDVKTY 568



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 28/330 (8%)

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           CK   +     +F R++     P++V FT ++  +        A  L+T ++  G  P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           +T+N LIN  C  G    A ++  ++           +PN VT++ ++ G C    +  A
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGC------RPNVVTFTTLMKGFCVNDKMLDA 143

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHAN--DWNEAKGLLIEMVD-QGVQPNVVSSNVI 233
             ++ +M    +  + V Y +LI+G C +       A  LL +M + Q V+PN++  N +
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCK+G ++ A  L   M+   + P+ FTY++L+ G C  G+   V  L         
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSL--------- 254

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                     +NG+C N +V+EA  L+N +  +G +  ++ YN L +G     +   A K
Sbjct: 255 ----------LNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARK 304

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           LF  M       DT TY   + G C+  +V
Sbjct: 305 LFHMMVERGEQPDTITYTILMHGYCLIDKV 334



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 13/175 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKM 59
           M +    PP V+++NILL  L + +  +  ++ FK L     F P++++Y+ILI+  CK 
Sbjct: 414 MHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKN 473

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
            ++     +F  +      P++VT+  L+  L    ++ +A AL  ++   G  PN+ TY
Sbjct: 474 RRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTY 533

Query: 120 NTLINGLCRTGH--TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           N LINGL + G   T   ++L+  +          + P+  TY  II+ LCK G 
Sbjct: 534 NILINGLHKGGRPKTAQKISLYLSIRG--------YHPDVKTY--IINELCKGGL 578


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 212/383 (55%), Gaps = 12/383 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L K  H    + +   +   G  PD+YTY+ +I+  CK+G+V      
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++    +PN VT+ +LI  LC E+++ EA  L   L + G  P+V T+N+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +  VA+ LF+EM +   E      P+  TY+++ID LC +G +D+A  +  QM+    
Sbjct: 413 TRNHRVAMELFEEMRSKGCE------PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V+TY +LI GFC AN   EA+ +  EM   GV  N V+ N +++ LCK+ ++++AS+
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQ 526

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+    +P+ FTYN+L+  FC  G I +  ++  +M S GC+ D  +Y  LI+G C
Sbjct: 527 LMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
           K   VE A  L   +  KGI  T   YN +  GLF  R+   A+ LF EM + N+ A D 
Sbjct: 587 KAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDA 646

Query: 368 CTYRTFIDGLC-----VRPQVRF 385
            +YR    GLC     +R  V F
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDF 669



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 203/376 (53%), Gaps = 5/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N +L  L    +   V     +++  G+ PD+ T+++LI   C+  Q+    ++
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  TFT++++G   E  +  A  +  ++  FGC  + ++ N +++G C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    ALN  +EM+N +G     F P+  T++ +++GLCK G V  A E+   M  E  
Sbjct: 272 EGRVEDALNFIQEMSNQDG-----FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY S+I G C   +  EA   L +M+ +   PN V+ N +++ LCK  +++ A+ 
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  ++    + P+  T+N+L+ G CLT       ELF  M S GC+ D+F+YN+LI+  C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +++EAL++  ++   G   +V+TYNTL  G  +  +   A ++F EM+ + V+ ++ 
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506

Query: 369 TYRTFIDGLCVRPQVR 384
           TY T IDGLC   +V 
Sbjct: 507 TYNTLIDGLCKSRRVE 522



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 193/406 (47%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS------------------ 50
           P VS+FN+L+  L +       + + + + S GL PD  T++                  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 51  -----------------ILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLC 92
                            ++++ FCK G+V         +  +  F P+  TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +  A  +   +   G +P+V TYN++I+GLC+ G    A+    +M   +      
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD------ 360

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PNTVTY+ +I  LCKE  V++A EL   +  + + P+V T+ SLI G C   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM  +G +P+  + N++++ LC  GK+D A  +L  M       +  TYNTL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   KI   +E+F  ME  G   +  +YN LI+G CK++ VE+A  L +++  +G KP  
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TYN+L          ++A  +   M  N    D  TY T I GLC
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 182/375 (48%), Gaps = 8/375 (2%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           S F IL+   A+ +  D +L +   + +  GL PD + Y+ ++N       + L  +   
Sbjct: 119 SPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+V TF  LIK LC   ++  A  +   + ++G  P+  T+ T++ G    G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LN 189
               AL + ++M     E G  +  + V+ ++I+ G CKEG V+ A     +M  ++   
Sbjct: 239 DLDGALRIREQMV----EFGCSW--SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+  T+ +L++G C A     A  ++  M+ +G  P+V + N +++ LCK G++  A   
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           LD M+  D  PN  TYNTL+   C   ++    EL   + S G   D  ++N LI G C 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            +    A+ L+ E+  KG +P   TYN L   L    + + AL +  +M+ +  A    T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 370 YRTFIDGLCVRPQVR 384
           Y T IDG C   ++R
Sbjct: 473 YNTLIDGFCKANKIR 487



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 45/381 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K    +    L + L S G+ PD+ T++ LI   C      +   +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T+  LI  LC++ ++ EA  +  +++  GC  +VITYNTLI+G C+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F EM     E+  V + N+VTY+ +IDGLCK   V+ A +L  QM  E  
Sbjct: 483 ANKIREAEEIFDEM-----EVHGVSR-NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY SL+  FC   D  +A  ++  M   G +P++V+   +++ LCK G+++ AS+
Sbjct: 537 KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 249 LL------------------------------------DLMVQCDVRPNAFTYNTLMDGF 272
           LL                                    +++ Q +  P+A +Y  +  G 
Sbjct: 597 LLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGL 656

Query: 273 C-LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           C   G I    +  V +   G   +  S  +L  G       E  + L N +  K     
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSE 716

Query: 332 VVTYNTLFHGLFEIRQAERAL 352
                ++  GL +IR+ + AL
Sbjct: 717 EEV--SMVKGLLKIRKFQDAL 735



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 41/200 (20%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P   ++N LL    +         + + + S G  PD+ TY  LI+  CK G+V 
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +      ++LRS                              ++K     P+   YN +I
Sbjct: 593 VA----SKLLRS-----------------------------IQMKGIALTPHA--YNPVI 617

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF-VDKAKELFLQ 182
            GL R   T  A+NLF+EM   N        P+ V+Y I+  GLC  G  + +A +  ++
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEA-----APDAVSYRIVFRGLCNGGGPIREAVDFLVE 672

Query: 183 MKYENLNPNVVTYTSLIHGF 202
           +  +   P   +   L  G 
Sbjct: 673 LLEKGFVPEFSSLYMLAEGL 692


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/371 (35%), Positives = 213/371 (57%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK   +D V+SL +++ ++G+  +LYTYSI IN FC+  Q+SL   I
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P++VT  SL+ G C  +RI EA AL  ++   G +P+ +T+ TL++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L + M     +      P+ VTY  +I+GLCK G  D A  L  +M+   +
Sbjct: 193 HNKASEAVALVERMVVKGCQ------PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VV Y ++I G C     ++A  L  +M  +G++P+V + N +++ LC  G+  +ASR
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGY 307
           LL  M++ ++ P+   +N L+D F   GK+   ++L+  M +S  C  D  +YN LI G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK K VEE + ++ E+  +G+    VTY TL HG F+ R  + A  +F +M  + V  D 
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426

Query: 368 CTYRTFIDGLC 378
            TY   +DGLC
Sbjct: 427 MTYNILLDGLC 437



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 31/400 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M   P  V+   ++ G    NK  + V +L +R+   G  PDL TY  +IN  CK G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVINGLCKRG 229

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +  L   +  ++ +     +VV + ++I GLC    + +A  LF K++  G +P+V TYN
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK-------------------------- 154
            LI+ LC  G    A  L  +M   N    +VF                           
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349

Query: 155 ----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ V Y+ +I G CK   V++  E+F +M    L  N VTYT+LIHGF  A D + 
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ +  +MV  GV P++++ N++++ LC NG ++ A  + + M + D++ +  TY T+++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  GK+    +LF S+   G K +  +Y  +++G+C+    EEA +L+ E+   G  P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
              TYNTL            + +L  EM+    A D  T+
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 171/334 (51%), Gaps = 7/334 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L K KH D    LF ++ + G+ PD++TY+ LI+C C  G+ S    +   +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 132
                P++V F +LI     E ++VEA  L+ ++ K+  C P+V+ YNTLI G C+    
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
              + +F+EM+   G +G     NTVTY+ +I G  +    D A+ +F QM  + ++P++
Sbjct: 373 EEGMEVFREMSQ-RGLVG-----NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY  L+ G C+  +   A  +   M  + ++ ++V+   ++  LCK GK+++   L   
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +    V+PN  TY T+M GFC  G       LFV M+  G   +  +YN LI    ++ +
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
              +  L  E+   G      T+  + + L + R
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 12/336 (3%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +++S   P++V F+ L+  +   ++     +L  +++  G   N+ TY+  IN  C
Sbjct: 62  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R     +AL +  +M      + + + P+ VT + +++G C    + +A  L  QM    
Sbjct: 122 RRSQLSLALAILGKM------MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VT+T+L+HG    N  +EA  L+  MV +G QP++V+   ++N LCK G+ D A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M +  +  +   YNT++DG C    ++   +LF  ME+ G K D F+YN LI+  
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAAD 366
           C      +A  L +++  K I P +V +N L     +  +   A KL+ EM +      D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 367 TCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
              Y T I G C   +V      F    ++G  GNT
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 149/291 (51%), Gaps = 6/291 (2%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           +L + +  + ++ +A  LF  +      P+++ ++ L++ + +     + ++L ++M N 
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN- 103

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
              +G+    N  TYSI I+  C+   +  A  +  +M      P++VT  SL++GFCH 
Sbjct: 104 ---LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
           N  +EA  L+ +MV+ G QP+ V+   +++ L ++ K   A  L++ MV    +P+  TY
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
             +++G C  G+ +    L   ME    + D   YN +I+G CK K +++A  L+N++  
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           KGIKP V TYN L   L    +   A +L  +M   ++  D   +   ID 
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 106/206 (51%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A  LF  M      P++V ++ L+      N ++    L  +M + G+  N+ + ++
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
            +N  C+  ++  A  +L  M++    P+  T N+L++GFC   +I+    L   M  MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D  ++  L++G  ++ +  EA++L   +  KG +P +VTY  + +GL +  + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M+   + AD   Y T IDGLC
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLC 261



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A GL  +MV     P++V  + +++ + K  K D    L + M    +  N +TY+  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++ FC   +++    +   M  +G      + N L+NG+C    + EA++L +++   G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +P  VT+ TL HGLF+  +A  A+ L   M       D  TY   I+GLC R +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 45/173 (26%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  ++  L K    +    LF  L+  G+ P++ TY+ +++ FC+            
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR------------ 508

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                             KGL  E     A ALF ++K  G  PN  TYNTLI    R G
Sbjct: 509 ------------------KGLKEE-----ADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
               +  L KEM +        F  +  T+ ++ + L  +G +DK+   FL M
Sbjct: 546 DEAASAELIKEMRSCG------FAGDASTFGLVTNML-HDGRLDKS---FLDM 588


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 209/397 (52%), Gaps = 50/397 (12%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY+ILI C C+ G++ LGF   G +++  F  + +TFT
Sbjct: 72  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC P+V +YN L+ GLC    +  AL L   M +
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD 191

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGF--------VDKAKELFLQMKYENLNPNVVTYT 196
             G       P+ V+Y+ +++G  KEG         +DKA E+   M    + P+ +TY 
Sbjct: 192 DRGGGS---PPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN 248

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---------- 246
           S++HG+C +    EA G L +M   GV+PNVV+ + +MN LCKNG+   A          
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308

Query: 247 -------------------------SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
                                     +L DLMV+  V+P+  TYNTL+DG CL GK++  
Sbjct: 309 GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            +L  SM S+G K D  +Y  LINGYC+   +++AL+L+ E+   G+ P ++TYN +  G
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           LF  R+   A +L+V +  +    +  TY   + GLC
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 192/380 (50%), Gaps = 17/380 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMG-QVSL 64
           P V S+N LL  L         L L   +      G  PD+ +Y+ ++N F K G Q  L
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220

Query: 65  -------GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
                     +   ++++   P+ +T+ S++ G C+  +  EA     K+++ G EPNV+
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TY++L+N LC+ G +  A  +F  MT          +P+  TY  ++ G CKEG V +++
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRG------LEPDIATYRTLLQGHCKEGRVIESE 334

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +LF  M    + P+++TY +LI G C A   +EA  LL  MV  GV+P++V+   ++N  
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C+  +MD+A  L   MV   V PN  TYN ++ G   T +    KEL+VS+   G + + 
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YNI+++G CKN   +EAL ++  L    ++    T+N +   L +  + + A  LF  
Sbjct: 455 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 514

Query: 358 MQGNDVAADTCTYRTFIDGL 377
              N +  D  TY    + L
Sbjct: 515 HSANGLVPDVRTYSLMAENL 534



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 14/385 (3%)

Query: 7   SPPPVSSFNILLGCLAKN--------KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           SPP V S+N +L    K         +  D  + +   +   G+ PD  TY+ +++ +C 
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            GQ         ++      PNVVT++SL+  LC   R  EA  +F  +   G EP++ T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TL+ G C+ G  I +  LF  M      IGV  KP+ +TY+ +IDG C  G +D+A +
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMV----RIGV--KPDIITYNTLIDGCCLAGKMDEATK 370

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M    + P++VTY +LI+G+C  +  ++A  L  EMV  GV PN+++ N+I+  L 
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
              +   A  L   + +   +    TYN ++ G C     +    +F ++     + +  
Sbjct: 431 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 490

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++NI+I    K   ++EA  L+      G+ P V TY+ +   L E    E    LF+ M
Sbjct: 491 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 550

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
           + N  +AD+    + +  L  R  +
Sbjct: 551 EENGCSADSRMLNSIVRKLLQRGDI 575



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L     +      +   K++ S G+ P++ TYS L+N  CK G+ +    I
Sbjct: 242 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P++ T+ +L++G C E R++E+  LF  +   G +P++ITYNTLI+G C 
Sbjct: 302 FDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   M      + V  KP+ VTY  +I+G C+   +D A  LF +M    +
Sbjct: 362 AGKMDEATKLLASM------VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN++TY  ++ G  H      AK L + +   G Q  + + N+I++ LCKN   D A R
Sbjct: 416 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   +   D++    T+N ++      G+++  K+LF +  + G   D  +Y+++     
Sbjct: 476 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           +   +EE   L+  +   G        N++   L +     RA
Sbjct: 536 EQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 8/243 (3%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+ GC    K  D    L   + S+G+ PD+ TY  LIN +C++ ++     
Sbjct: 347 PDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  ++ S  +PN++T+  +++GL    R   A  L+  +   G +  + TYN +++GLC
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  AL +F+ +   + ++       T T++I+I  L K G +D+AK+LF       
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQL------ETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 519

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V TY+ +           E   L + M + G   +    N I+ +L + G +  A 
Sbjct: 520 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 579

Query: 248 RLL 250
             L
Sbjct: 580 TYL 582



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 51/245 (20%)

Query: 188 LNPNVVTY-----------------------------------TSLIHGFCHANDWNEAK 212
           + P V TY                                   T L+ G C     ++A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 213 GLLI-EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR-----PNAFTYN 266
            +++  M + G  P+V S N ++  LC   +   A  LL +M   D R     P+  +YN
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA--DDRGGGSPPDVVSYN 205

Query: 267 TLMDGFCLTG--------KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           T+++GF   G         +++  E+  +M   G   D  +YN +++GYC + + +EA+ 
Sbjct: 206 TVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              ++   G++P VVTY++L + L +  ++  A K+F  M    +  D  TYRT + G C
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC 325

Query: 379 VRPQV 383
              +V
Sbjct: 326 KEGRV 330


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 218/408 (53%), Gaps = 31/408 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  + P+PP +  FN +L  L K  HY T +SLF++L   G+ P + T +IL+NC+C  G
Sbjct: 1   MLQISPTPP-ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTG 59

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++  F I  +IL+  + PN +TFT+LIKG+C   +  EA      + A G + + ++Y 
Sbjct: 60  GITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYA 119

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK-------------------------- 154
            L+NGLC+ G T  A+ + ++ T  N ++ V++                           
Sbjct: 120 ILMNGLCKMGETRAAMQMLRK-TWVNADV-VMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 155 --PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN  T+SI++D LCK+    +A  L   M  + + PNVVTY +++ G+C  N  N+A 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +   MV +GV+PNV   N+I+N LCK  ++D A  L   M    + P+  TYN L+DG 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GKI+   EL   M S+G   D  +YN L++  CKN  +++A++L  E+  +GI+P V
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            TY TL  GL +  + E A  +F E+          TY   I+GLC +
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK 405



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L K       + + ++     +  D+  YS +I+  CK   V+  + ++  +
Sbjct: 117 SYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEM 173

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PNV TF+ L+  LC + +  +A  L   +   G +PNV+TY  +++G C     
Sbjct: 174 IAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQV 233

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             ALN+F  M     E      PN   Y+III+GLCK+  VD+A  LF +M ++ +NP+V
Sbjct: 234 NKALNIFNVMVQEGVE------PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDV 287

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY  LI G C     + +  L+ EM   G   ++++ N +++ LCKN  +D A  L+  
Sbjct: 288 VTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKE 347

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +    ++PN  TY TL+DG C  G++     +F  + + G     ++YN++ING CK   
Sbjct: 348 IKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +EAL+L + +      P  V+Y T+ + L E  +  +  KL   M
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 6/318 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ ++  L K K       L+  + + G+FP++YT+SIL++  CK  +      +  
Sbjct: 147 VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +++    PNVVT+ +++ G C  +++ +A  +F  +   G EPNV  YN +INGLC+  
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKK 266

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+NLFKEM            P+ VTY+I+IDGLCK G +  + EL  +M+      
Sbjct: 267 RVDEAMNLFKEMHWKK------INPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV 320

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++TY SL+H  C  +  ++A  L+ E+ DQG+QPNV +   +++ LCK+G++++A  + 
Sbjct: 321 DIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIF 380

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             ++        +TYN +++G C  G  +    L   ME   C  D  SY  +I    + 
Sbjct: 381 QEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEK 440

Query: 311 KEVEEALSLYNELPFKGI 328
            E  +   L   +  +G+
Sbjct: 441 GETVKTNKLLCAMIVRGL 458



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 22/392 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  +  N      L     + + G   D  +Y+IL+N  CKMG+       
Sbjct: 78  PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM-- 135

Query: 69  FGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             ++LR  +   +VV ++++I  LC    + +A  L++++ A G  PNV T++ L++ LC
Sbjct: 136 --QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALC 193

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A+NL   M       GV  KPN VTY  I+DG C    V+KA  +F  M  E 
Sbjct: 194 KDRKGKQAMNLLAMMMKK----GV--KPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PNV  Y  +I+G C     +EA  L  EM  + + P+VV+ N++++ LCK GK+  + 
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+D M       +  TYN+L+   C    +++   L   ++  G + +  +Y  LI+G 
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+  +E+A  ++ E+  +G   TV TYN + +GL +    + AL L   M+ N    D 
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427

Query: 368 CTYRTFIDGLCVRPQVRFTYARRKGNSGNTNR 399
            +Y T I  L             KG +  TN+
Sbjct: 428 VSYETIIYAL-----------SEKGETVKTNK 448



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 139/274 (50%), Gaps = 17/274 (6%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEG- 171
           P ++ +N ++  L +  H   A++LF+++  NG        KP+ VT +I+++  C  G 
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNG-------IKPSIVTLTILMNCYCHTGG 60

Query: 172 --FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
             F+       L+M YE   PN +T+T+LI G C      EA      +V  G + + VS
Sbjct: 61  ITFLFSILTKILKMGYE---PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVS 117

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
             ++MN LCK G+   A ++L    +  V  +   Y+T++D  C    +     L+  M 
Sbjct: 118 YAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G   + ++++IL++  CK+++ ++A++L   +  KG+KP VVTY  +  G   + Q  
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +AL +F  M    V  +   Y   I+GLC + +V
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRV 268



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 95/218 (43%), Gaps = 22/218 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P V ++NIL+  L K     T L L   + SIG   D+ TY+ L++  CK   +
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +   I      PNV T+T+LI GLC + R+ +A  +F ++   G    V TYN +
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVM 398

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G    AL L   M + N  I     P+ V+Y  II  L ++G   K  +L   
Sbjct: 399 INGLCKKGLFDEALALLSRMED-NACI-----PDAVSYETIIYALSEKGETVKTNKLLCA 452

Query: 183 M----------------KYENLNPNVVTYTSLIHGFCH 204
           M                   +LN     Y SL  G  H
Sbjct: 453 MIVRGLSKRLKKKVNMTTIADLNDKWAAYASLEDGMIH 490



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 52/132 (39%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+Q    P    +N ++              LF  +E  G K    +  IL+N YC    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +    S+  ++   G +P  +T+ TL  G+    QA  AL     +  +    D  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 373 FIDGLCVRPQVR 384
            ++GLC   + R
Sbjct: 121 LMNGLCKMGETR 132


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 209/392 (53%), Gaps = 35/392 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L+K +  D  + +     ++ + P+ +TY+ +++ +C  GQ      I
Sbjct: 44  PDAVTYNSIIAALSKAQAMDRAMEVL----TVMVMPNCFTYNSIMHGYCSSGQSEKAIGI 99

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+VVT+ SL+  LC   +  EA  +F  +   G +P++ TY TL++G   
Sbjct: 100 FRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYAS 159

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVFK--------PNTV 158
            G  +   +L   M   NG                      E+ +VF         PN V
Sbjct: 160 KGALVEMHDLLALMVQ-NGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAV 218

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y  +IDGLCK G +D A   F QM  + L PNVV YTSLIH  C  + W +A+ L+ E+
Sbjct: 219 NYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +DQG+ PN+V  N I++ LCK G++  + +L DL+    V P+  TY+TL+DG+CL GK+
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L   M S+G K D  +Y+ LINGYCK   +E+AL+L+ E+   G+ P ++TYN +
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            HGLF  R+   A +L+  +  +    +  TY
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTY 430



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 172/370 (46%), Gaps = 45/370 (12%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+ +Y+ +I+   K G V   ++ +  +L    +P+ VT+ S+I  L     +  A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
            T +      PN  TYN++++G C +G +  A+ +F++M +   E      P+ VTY+ +
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PDVVTYNSL 118

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +D LCK G   +A+++F  M    L P++ TY +L+HG+       E   LL  MV  G+
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 224 Q-----------------------------------PNVVSSNVIMNELCKNGKMDNASR 248
           Q                                   PN V+   +++ LCK G++D+A  
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M+   + PN   Y +L+   C   K  + +EL   +   G   +   +N +++  C
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V E+  L++ L   G+ P V+TY+TL  G     + + A+KL   M    +  D+ 
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 369 TYRTFIDGLC 378
           TY T I+G C
Sbjct: 359 TYSTLINGYC 368



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 146/267 (54%), Gaps = 10/267 (3%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C P+V++YNT+I+GL + G    A   + EM +          P+ VTY+ II  L K  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR------VSPDAVTYNSIIAALSKAQ 60

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +D+A E+   M    + PN  TY S++HG+C +    +A G+  +M   G++P+VV+ N
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +M+ LCKNGK   A ++ D MV+  ++P+  TY TL+ G+   G +  + +L   M   
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D   +NILI  Y K ++V+E + +++++  +G+ P  V Y T+  GL ++ + + A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  F +M    +  +   Y + I  LC
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALC 263



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 155/301 (51%), Gaps = 6/301 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+  D + ++ILI  + K  +V    ++
Sbjct: 145 PDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLV 204

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PN V + ++I GLC   R+ +A   F ++   G  PNV+ Y +LI+ LC 
Sbjct: 205 FSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCT 264

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  E+ +          PN V ++ I+D LCKEG V ++K+LF  + +  +
Sbjct: 265 YDKWEKAEELIFEILDQG------INPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGV 318

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+V+TY++LI G+C A   + A  LL  MV  G++P+ V+ + ++N  CK  +M++A  
Sbjct: 319 NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALA 378

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+  +   G + +  +YNI++  + 
Sbjct: 379 LFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFA 438

Query: 309 K 309
           K
Sbjct: 439 K 439



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 10/305 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+VV++ ++I GL  E  + +A   + ++      P+ +TYN++I  L +          
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKA--------- 59

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
            + M      + V+  PN  TY+ I+ G C  G  +KA  +F +M  + + P+VVTY SL
Sbjct: 60  -QAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +   C      EA+ +   MV +G++P++ +   +++     G +     LL LMVQ  +
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           + +   +N L+  +    K++ V  +F  M   G   +  +Y  +I+G CK   +++A+ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + ++  KG+ P VV Y +L H L    + E+A +L  E+    +  +   + T +D LC
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 379 VRPQV 383
              +V
Sbjct: 299 KEGRV 303



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +++ L+   CLA     D  + L   + S+GL PD  TYS LIN +CK+ ++    
Sbjct: 320 PDVITYSTLIDGYCLAGK--MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +  +   P+++T+  ++ GL    R   A  L+ ++   G +  + TYN ++   
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDF 437

Query: 127 CRTGHTIVALNLFK 140
            +T   ++    F+
Sbjct: 438 AKTNSLMMHFGCFR 451


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/387 (35%), Positives = 215/387 (55%), Gaps = 35/387 (9%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PPV  FN +L   A  KHY T +SL  RL   G+ PD +T +IL+NCFC MG
Sbjct: 64  MRH----TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMG 119

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q++ GF +  +IL+  + P+ +TFT+LIKGLC + ++ +A     KL A G + + ++Y 
Sbjct: 120 QINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYG 179

Query: 121 TLINGLCRTGHTIVALNLFKE----MTNGNGEI-------------------------GV 151
           TLING+C+ G T  A+ L ++    +T  N E+                           
Sbjct: 180 TLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAK 239

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
               N V+Y+I+I G CK   VD+A  LF +M  +N+ P +VTY SL+ G C +   +  
Sbjct: 240 GISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYV 299

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L+ EM D+G+  +V++ N +++ LCKNG +D A  L + M   D R +  T+  L+DG
Sbjct: 300 WELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK--DXRFDRLTFTILLDG 357

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G++   +E+F  + +     D + YN++INGYCK   +EEAL++ +++   G  P+
Sbjct: 358 LCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPS 417

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEM 358
            VT+  + + LFE  + ++A KL  EM
Sbjct: 418 AVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 6/280 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F  +      P VI +N +++      H   A++L   +     E+  + +P+  
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRL-----ELKGI-QPDFF 106

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+++  C  G ++    +  ++      P+ +T+T+LI G C     N+A     ++
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + QG++ + VS   ++N +CK G    A +L+  +     +PN   YNT++D  C    +
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    LF  M + G   +  SYNI+I G+CK+K V+EAL+L+ E+  K + PT+VTY +L
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GL +  +     +L  EM    + AD  TY + IDGLC
Sbjct: 287 MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLC 326



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 8/248 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V  +N ++  L K +       LF  + + G+  ++ +Y+I+I  FCK   V    
Sbjct: 206 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEAL 265

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + +    P +VT+ SL+ GLC   RI     L  ++   G   +VITYN+LI+GL
Sbjct: 266 NLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGL 325

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ GH   A+ LF +M +         + + +T++I++DGLCK G +  A+E+F  +  +
Sbjct: 326 CKNGHLDRAIALFNKMKD--------XRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTK 377

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             + +V  Y  +I+G+C      EA  +  +M D G  P+ V+  +I+N L +  + D A
Sbjct: 378 EYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKA 437

Query: 247 SRLLDLMV 254
            +LL  M+
Sbjct: 438 EKLLHEMI 445



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 115/233 (49%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  + ++ I+D          A  L  +++ + + P+  T   L++ FCH    N    +
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSV 127

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +++ +G QP+ ++   ++  LC  G+++ A    D ++   ++ +  +Y TL++G C 
Sbjct: 128 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 187

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G      +L   ++    K +   YN +I+  CK + V EA  L++E+  KGI   VV+
Sbjct: 188 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVS 247

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           YN +  G  + +  + AL LF EM   ++     TY + +DGLC   ++ + +
Sbjct: 248 YNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVW 300



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 278 INRVKELFVSMESMGC-KHDD--FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           I  V +      SM C +H      +N +++ +   K    A+SL + L  KGI+P   T
Sbjct: 48  IQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFT 107

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            N L +    + Q      +  ++        T T+ T I GLC++ QV
Sbjct: 108 LNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQV 156


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/374 (35%), Positives = 207/374 (55%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M+P PP    F  L G + K KHY T +SL K   S+G+ PD++T +I+INC C +    
Sbjct: 1   MNPLPPD-KDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTV 59

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
            GF + G + +    P VVTF +LI GLCAE  +  AA     L+  G E N  T+ T+I
Sbjct: 60  FGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTII 119

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC+ G T  A++  +++   N    ++     + YS I+D LCK+G +  A   F  M
Sbjct: 120 NGLCKVGDTAGAISYLEKIEGRNRGFDLL-----IAYSTIMDSLCKDGMLCLALNFFSGM 174

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + + P++V Y SLIHG C    WNEA  LL  M+ +G+ PNV + NV+++  CK GK+
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  ++  MV   V P+  TYN+++ G CL  ++N   ++F  M   G   +  +Y+ L
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSL 294

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+CK + + +A+ + +E+   G+   VVT++TL  G  +  + E A++LF  M  +  
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQ 354

Query: 364 AADTCTYRTFIDGL 377
             +  T    +DGL
Sbjct: 355 LPNLQTCAIILDGL 368



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 177/362 (48%), Gaps = 6/362 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ ++  L K+      L+ F  +   G+ PDL  Y+ LI+  C  G+ +    + G +
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +R    PNV TF  L+   C E +I  A  +   +   G EP+V+TYN++I+G C     
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ +F+ M +          PN VTYS +I G CK   ++KA  +  +M    LN +V
Sbjct: 270 NDAVKVFELMIHKG------LLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDV 323

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+++LI GFC A     A  L   M +    PN+ +  +I++ L K      A  L   
Sbjct: 324 VTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRK 383

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + ++  N  TYN ++DG C  GK N  +ELF  + S G + D  +Y  +I G CK   
Sbjct: 384 MEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGL 443

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A  L  ++   G  P   TYN L  GL +     R+ K  + M+G  ++AD  T   
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTEL 503

Query: 373 FI 374
            I
Sbjct: 504 LI 505



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 6/304 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+L+    K        ++   +  +G+ PD+ TY+ +I+  C + Q++    +
Sbjct: 216 PNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKV 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNVVT++SLI G C    I +A  +  ++   G   +V+T++TLI G C+
Sbjct: 276 FELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCK 335

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF  M   +        PN  T +II+DGL K  F  +A  LF +M+  NL
Sbjct: 336 AGRPEAAIELFCTMHEHHQ------LPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNL 389

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY  ++ G C    +N+A+ L   +  +G+Q +VV+   ++  LCK G +D+A  
Sbjct: 390 ELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAED 449

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PN FTYN L+ G      I+R  +  + M+  G   D  +  +LI+ + 
Sbjct: 450 LLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYFS 509

Query: 309 KNKE 312
            NKE
Sbjct: 510 ANKE 513



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 13/269 (4%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           + TL   + +  H   A++L K   +    +GV  KP+  T +I+I+ LC          
Sbjct: 10  FATLFGVIVKMKHYATAISLIKHTYS----LGV--KPDVHTLTIVINCLCHLKHTVFGFS 63

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +   M    + P VVT+ +LI+G C   +   A      + D G + N  +   I+N LC
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAF----TYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           K G    A   L+   + + R   F     Y+T+MD  C  G +      F  M   G +
Sbjct: 124 KVGDTAGAISYLE---KIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  +YN LI+G C      EA +L   +  KGI P V T+N L     +  +  RA  +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              M    V  D  TY + I G C+  Q+
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQM 269



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H   P + +  I+L  L K + +   +SLF+++  + L  ++ TY+I+++  C  G+ 
Sbjct: 350 HEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKF 409

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       +VV +T++IKGLC E  + +A  L  K++  GC PN  TYN L
Sbjct: 410 NDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVL 469

Query: 123 INGLCR 128
           + GL +
Sbjct: 470 VRGLLQ 475


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 206/400 (51%), Gaps = 31/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D  + +   +   G+ PD  TY+ +++ FC  GQ     V 
Sbjct: 121 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 180

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 181 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYAT 240

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVFK--------PNTV 158
            G  +    L   M   NG                      E  +VF         PN V
Sbjct: 241 KGALVEMHGLLDLMVR-NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY  +I  LCK G V+ A   F QM  E L+P  + Y SLIHG C  N W  A+ L++EM
Sbjct: 300 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 359

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G+  N +  N I++  CK G++  + +L DLMV+  V+P+  TY+TL+DG+CL GK+
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L  SM S+G K D  +Y+ LINGYCK   +++AL L+ E+   G+ P ++TYN +
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNII 479

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 188/363 (51%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SIL+  + K  +V    ++
Sbjct: 226 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PN VT+ ++I  LC   R+ +A   F ++   G  P  I YN+LI+GLC 
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 346 CNKWERAEELILEMLDR----GICL--NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++P+ V+ + ++N  CK  +M +A  
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALV 459

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 460 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK  ++AL ++  L    +K    T+N +   L ++ + + A  LFV    N +  +  
Sbjct: 520 KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 579

Query: 369 TYR 371
           TYR
Sbjct: 580 TYR 582



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 166/313 (53%), Gaps = 9/313 (2%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLING 125
           +F  +LR    P+V ++  L+ GLC E+R  EA  L   +   G  C P+V++Y+T+ING
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             + G      + + EM +          PN VTY+ II  LCK   VDKA E+   M  
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + P+ +TY S++HGFC +    EA   L +M   GV+P+VV+ N +M+ LCKNG+   
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G   + + ++IL+ 
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            Y K ++VEEA+ +++++  +G+ P  VTY  +   L +  + E A+  F +M    ++ 
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331

Query: 366 DTCTYRTFIDGLC 378
               Y + I GLC
Sbjct: 332 GNIVYNSLIHGLC 344



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 6/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+IL+   AK +  +  + +F ++   GL P+  TY  +I   CK G+V    + F +++
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               +P  + + SLI GLC  ++   A  L  ++   G   N I +N++I+  C+ G  I
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            +  LF  M      IGV  KP+ +TYS +IDG C  G +D+A +L   M    + P+ V
Sbjct: 386 ESEKLFDLMVR----IGV--KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY++LI+G+C  +   +A  L  EM   GV P++++ N+I+  L +  +   A  L   +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +   +    TYN ++ G C     +    +F ++  M  K +  ++NI+I+   K    
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA  L+      G+ P   TY  +   +      E   +LF+ M+ N    D+      
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619

Query: 374 IDGLCVRPQV 383
           +  L  R ++
Sbjct: 620 VRELLQRGEI 629



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 169/344 (49%), Gaps = 10/344 (2%)

Query: 43  FPDLYTYSILINCFCK--MGQVSLGFV-IFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
            PD+++Y+IL+N  C     Q +L  + I       C  P+VV+++++I G   E  + +
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDC-PPDVVSYSTVINGFFKEGDLDK 106

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
             + + ++      PNV+TYN++I  LC+      A+ +   M       GV+  P+ +T
Sbjct: 107 TYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS----GVM--PDCMT 160

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ I+ G C  G   +A     +M+ + + P+VVTY SL+   C      EA+ +   M 
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 220

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P + +   ++      G +     LLDLMV+  + PN + ++ L+  +    K+ 
Sbjct: 221 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 280

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +F  M   G   +  +Y  +I   CK+  VE+A+  + ++  +G+ P  + YN+L 
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           HGL    + ERA +L +EM    +  +T  + + ID  C   +V
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 207/400 (51%), Gaps = 29/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S+  ++  L +    D    LF  +   G+ P+  TY+ L++ +C  G+      
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF ++ R    P+VVT+ +L+  LC   R +EA  +F  +   G +P+   Y TL++G  
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322

Query: 128 RTGHTIVALNLFKEMTNGNGE---------IGVVFK--------------------PNTV 158
             G+ +    L   M     +         IG   K                    PN V
Sbjct: 323 TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIV 382

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY  ++D LC+ G VD A   F ++  E L PN V + +LIHG C  + W++A+ L +EM
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEM 442

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G+ PN +  N ++N LCK G +  A  + DLMV+ DV+ +  TY TL+DG+CL GK+
Sbjct: 443 IGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKV 502

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L   M   G K ++ +YN +INGYCKN  +E+A SL+ ++  KG+ P +V Y+T+
Sbjct: 503 DEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTI 562

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+ R+   A +L++ M    +     TY   + GLC
Sbjct: 563 LHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLC 602



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 197/351 (56%), Gaps = 7/351 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LSLF R+       DL TYSI+I C  + G + L F   GR++R+ +    +TF+ L+K
Sbjct: 84  ALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 90  GLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           GLC + R  +A  +   ++ A GC PN  +YN L+ GLC    +  AL+L   M   +  
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            G    P+ V+Y+ +I+GL +EG +DKA  LF +M  + ++PN +TY  L+HG+C +   
Sbjct: 200 GGC--PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EA G+  +M   GV+P+VV+ N +M  LCKNG+   A ++ D MV+   +P++  Y TL
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G+   G + ++ +L   M   G + D + +NILI  Y K+  V+EA+  ++++  +G+
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            P +VTY T+   L  + + + A+  F  +    +  +   +RT I GLC 
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S +  LL   A   +   +  L   +   G  PD Y ++ILI  + K G V    + 
Sbjct: 309 PDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLA 368

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PN+VT+ +++  LC   ++ +A + F +L + G  PN + + TLI+GLC 
Sbjct: 369 FSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM      IG    PNT+ ++ +++ LCKEG V +AK +F  M   ++
Sbjct: 429 CDKWDKAEELAVEM------IGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDV 482

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V+TYT+LI G+C     +EA  LL  MV  GV+PN V+ N I+N  CKNG++++A  
Sbjct: 483 QCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACS 542

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P    Y+T++ G   T +I   KEL++ M   G K    +YNI++ G C
Sbjct: 543 LFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLC 602

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   ++AL +++ L          T+N +   L +  + + A  LF  +    +  +  
Sbjct: 603 QNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 662

Query: 369 TYRTFIDGL 377
           TY   +  L
Sbjct: 663 TYWLMMKSL 671



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 190/378 (50%), Gaps = 6/378 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P    FNIL+G  AK+   D  +  F ++   GL P++ TY  +++  C++G+V    
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             F R++     PN V F +LI GLCA  +  +A  L  ++   G  PN I +NTL+N L
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A N+F  M      + V  + + +TY+ +IDG C +G VD+A +L   M  +
Sbjct: 462 CKEGMVTRAKNIFDLM------VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PN VTY ++I+G+C      +A  L  +M  +GV P +V  + I++ L +  ++  A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M++C ++    TYN ++ G C     +    +F ++  +     + ++NI+I+ 
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K    +EA  L+  L  +G+ P VVTY  +   L E    E    LF+ ++ N   AD
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695

Query: 367 TCTYRTFIDGLCVRPQVR 384
           +      +  L  + +VR
Sbjct: 696 SRMLNALVGKLPQKGEVR 713


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 204/377 (54%), Gaps = 7/377 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP   FN +L  L KNK Y TV+SLFK+    G+ PDL T SILINCFC + 
Sbjct: 52  MLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLT 110

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++  F +F  IL+  + PN +T  +LIKGLC    I  A     K+ A G + + ++Y 
Sbjct: 111 HITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYG 170

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T     L +++       G   KP+ V Y+ II  LCK   +  A +L+
Sbjct: 171 TLINGLCKAGETKAVARLLRKLE------GHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNV TYT+LIHGFC   +  EA  LL EM  + + P+V + N++++ L K 
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKE 284

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  L + M   ++ PN  TY +L+DG C    + R   L   M+  G + + +SY
Sbjct: 285 GKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSY 344

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL++  CK   +E A   +  L  KG    V TYN + +GL +       + L  +M+G
Sbjct: 345 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 404

Query: 361 NDVAADTCTYRTFIDGL 377
                +  T++T I  L
Sbjct: 405 KGCMPNAITFKTIICAL 421



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 6/310 (1%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L     P    F +++  L    R     +LF + +  G  P++ T + LIN  C 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A ++F  +          + PN +T + +I GLC  G + +A     ++  +  
Sbjct: 109 LTHITFAFSVFANILKRG------YHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGF 162

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V+Y +LI+G C A +      LL ++    V+P++V    I++ LCKN  + +A  
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN FTY TL+ GFC+ G +     L   M+      D +++NILI+   
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++EA+SL+ E+  K + P +VTY +L  GL +    ERA+ L  +M+   +  +  
Sbjct: 283 KEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVY 342

Query: 369 TYRTFIDGLC 378
           +Y   +D LC
Sbjct: 343 SYTILLDALC 352



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 6/250 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P +  +  ++ CL KNK       L+  +   G+ P+++TY+ LI+ FC MG +  
Sbjct: 195 HSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKE 254

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +      P+V TF  LI  L  E +I EA +LF ++K     PN++TY +LI+
Sbjct: 255 AFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLID 314

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+  H   A+ L K+M     E G+  +PN  +Y+I++D LCK G ++ AK+ F  + 
Sbjct: 315 GLCKNHHLERAIALCKKMK----EQGI--QPNVYSYTILLDALCKGGRLENAKQFFQHLL 368

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  + NV TY  +I+G C A  + +   L  +M  +G  PN ++   I+  L +  + D
Sbjct: 369 VKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDEND 428

Query: 245 NASRLLDLMV 254
            A + L  M+
Sbjct: 429 KAEKFLREMI 438



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P    + +++        +     L  +    G+ P++ + ++++N  C    +  A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              +++    PNA T NTL+ G C  G+I R       + + G + D  SY  LING CK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             E +    L  +L    +KP +V Y T+ H L + +    A  L+ EM    ++ +  T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 370 YRTFIDGLCVRPQVRFTYA 388
           Y T I G C+   ++  ++
Sbjct: 239 YTTLIHGFCIMGNLKEAFS 257


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 199/352 (56%), Gaps = 6/352 (1%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           +  V+ + + +++ GL PD Y Y++L++  CK G+ +    IF  ++R    PNV  +  
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGI 312

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+ G   E  + E  +    +   G  P+   +N +     +      A+++F +M    
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   PN VTY  +ID LCK G VD A   F QM  E + P++  ++SL++G C  +
Sbjct: 373 ------LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            W +A+ L  E++DQG++ + V  N +M  LC+ G++  A RL+DLM++  VRP+  +YN
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYN 486

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+DG CLTG+I+   +L   + S+G K D  +YN L++GYCK + +++A SL+ E+  K
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G+ P VVTYNT+ HGLF+  +   A +L++ M  +    +  TY   I+GLC
Sbjct: 547 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLC 598



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 13/383 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNK---HYDTVLSLFKRLN---SIGLFPDLYTYSILINCFCK 58
           H  P  V +FN LL  +++ +     + V+SLF R+    SI + P  +TY+ILI CFC+
Sbjct: 45  HARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCR 104

Query: 59  MGQVSLGFVIFGRILRSCFAPN-VVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNV 116
           MG++  GF  FG IL++ +  N  V F+ L+KGLC   R+ EA   L  ++  FGC P+V
Sbjct: 105 MGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDV 164

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
            +Y+ L+ G C       AL L   M + G+G       PN VTY+ +IDGLCK   VD+
Sbjct: 165 FSYSILLKGFCNEKRAEEALELLSMMADDGDGS----HTPNVVTYTTVIDGLCKAQMVDR 220

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           AK +F  M  + + PN  TYT LIHG+     W E   +L EM   G+QP+     V+++
Sbjct: 221 AKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLD 280

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCKNG+   A  + D +++  ++PN   Y  L+ G+   G ++ +      M   G   
Sbjct: 281 YLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSP 340

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D   +NI+   Y K   ++EA+ +++++  + + P +VTY  L   L ++ + + A+  F
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
            +M    +  D   + + + GLC
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLC 423



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI+    AK    D  + +F ++    L P++ TY  LI+  CK+G+V    + 
Sbjct: 340 PDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLK 399

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P++  F+SL+ GLC   +  +A  LF ++   G   + + +NTL+  LCR
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR 459

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M      +GV  +P+ ++Y+ ++DG C  G +D+A +L   +    L
Sbjct: 460 EGRVMEAQRLIDLML----RVGV--RPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +L+HG+C A   ++A  L  EM+ +G+ P+VV+ N I++ L + G+   A  
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+    + N +TYN +++G C    ++   ++F S+ S   + D F+ NI+I    
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +   G+ P V TY  +   L +    E   +LF  M+ N  A ++ 
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R  +
Sbjct: 694 MLNALVRWLLHRGDI 708



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 156/330 (47%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ L+  L     ++    LF  +   G+  D   ++ L+   C+ G+V     +
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR    P+V+++ +L+ G C   RI EAA L   + + G +P+ +TYNTL++G C+
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCK 529

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +LF+EM            P+ VTY+ I+ GL + G   +AKEL+L M     
Sbjct: 530 ARRIDDAYSLFREMLMKG------LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+ TY  +I+G C  N  +EA  +   +  + +Q ++ ++N+++  L K G+ ++A  
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    + P+  TY  + +     G +  + ELF +ME  G   +    N L+    
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              ++  A +  ++L  K       T + L
Sbjct: 704 HRGDINRAGAYLSKLDEKNFSLEASTTSML 733



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 6/312 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN L+  L +         L   +  +G+ PD+ +Y+ L++  C  G++     +   I+
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+ VT+ +L+ G C   RI +A +LF ++   G  P+V+TYNT+++GL +TG   
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L+  M N   ++      N  TY+III+GLCK  FVD+A ++F  +  ++L  ++ 
Sbjct: 570 EAKELYLSMINSRTQM------NIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T   +I          +A  L   +   G+ P+V +  +I   L K G ++    L   M
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    PN+   N L+      G INR       ++      +  + ++LI+ Y + +  
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQ 743

Query: 314 EEALSLYNELPF 325
           + A SL  +  F
Sbjct: 744 QLAKSLPEKYHF 755


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 205/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L     ++     +   K++ S G+ PD+ TY+ L++  CK G+ +    I
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P++ T+ +L++G   +  +VE  AL   +   G  P+   +N LI    +
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F +M            PN VTY  +I  LCK G VD A   F QM  E L
Sbjct: 384 QEKVDEAMLVFSKMRQHG------LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++ YTSLIH  C  + W++A+ L++EM+D+G+  N +  N I++  CK G++  + +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L DLMV+  V+PN  TY+TL+DG+CL GK++   +L  SM S+G K D  +YN LINGYC
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   +++AL+L+ E+   G+ P ++TYN +  GLF  R+   A +L+V +  +    +  
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS 617

Query: 369 TYRTFIDGLC 378
           TY   + GLC
Sbjct: 618 TYNIILHGLC 627



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 189/387 (48%), Gaps = 36/387 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY ILI C C+ G++ LGF   G +++  F    +TFT
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++    C P+V +   L+ GLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             I   FK                    P+ VTYS II  LCK   
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + PN +TY S++HG+C +    EA G L +M   GV+P+VV+ N 
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +M+ LCKNG+   A ++ D M +  + P+  TY TL+ G+   G +  +  L   M   G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D   +NILI  Y K ++V+EA+ +++++   G+ P VVTY  +   L +    + A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCV 379
             F +M    +  +   Y + I  LC+
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCI 453



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       + +L   +   G+ PD + ++ILI  + K  +V    ++
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PNVVT+ ++I  LC    + +A   F ++   G  PN+I Y +LI+ LC 
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ II   CKEG V ++++LF  M    +
Sbjct: 454 FDKWDKAEELILEMLDR----GICL--NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++LI G+C A   +EA  LL  M   G++P+ V+ N ++N  C+  +MD+A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   V PN  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 687

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 688 TYSLMAENL 696



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 10/247 (4%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +++ L+   CLA     D    L   + S+G+ PD  TY+ LIN +C++ ++    
Sbjct: 509 PNVITYSTLIDGYCLAGK--MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++ S  +PN++T+  +++GL    R   A  L+  +   G +  + TYN +++GL
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   T  AL +F+ +   +       +  T T++I+I  L K G  D+AK+LF  +   
Sbjct: 627 CKNNLTDEALRMFQNLCLTD------LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 680

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+V TY+ +           E   L + M + G   N    N I+ +L + G +  A
Sbjct: 681 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740

Query: 247 SRLLDLM 253
              L ++
Sbjct: 741 GTYLSMI 747



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 4/199 (2%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P V TY  LI   C A   +     L  +V +G +   ++   ++  LC + +  +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 248 RL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNIL 303
            + L  M +    P+ F+   L+ G C   +     EL   M      G   D  SY  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING+ K  + ++A S Y+E+  + I P VVTY+++   L + +  ++A+++   M  N V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 364 AADTCTYRTFIDGLCVRPQ 382
             +  TY + + G C   Q
Sbjct: 263 MPNCMTYNSILHGYCSSEQ 281


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 206/377 (54%), Gaps = 10/377 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M P PPP   FN +L  L KNK Y TV+SLFK+    G+ PDL T SILINCFC    ++
Sbjct: 52  MRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHIT 110

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L F +F  IL+  F P+ +T  +LIKGLC    I +      ++ A G + + ++Y TLI
Sbjct: 111 LAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLI 170

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC+ G T     L +++       G   KP+ V Y+ II+ LCK   +  A +++ +M
Sbjct: 171 NGLCKAGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK- 242
             + ++P+VVTYT+LIHGFC      EA  LL EM  + + P+V + +V+++ L K GK 
Sbjct: 225 IVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKK 284

Query: 243 --MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             +D A  L + M   ++ P+  TYN+L+DG C    + R   L   M+  G + D +SY
Sbjct: 285 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSY 344

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL++G CK   +E A   +  L  KG    V  YN + +GL +      A+ L  +M+G
Sbjct: 345 TILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEG 404

Query: 361 NDVAADTCTYRTFIDGL 377
                +  T+RT I  L
Sbjct: 405 KGCMPNAITFRTIICAL 421



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 44/358 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC----------- 57
           P + + +IL+ C     H     S+F  +   G  PD  T + LI   C           
Sbjct: 91  PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYF 150

Query: 58  ---------KMGQVSLGFVIFG-----------RILRS----CFAPNVVTFTSLIKGLCA 93
                    ++ QVS G +I G           R+LR        P+VV + ++I  LC 
Sbjct: 151 HDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 210

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              + +A  +++++   G  P+V+TY TLI+G C  G    A +L  EM   N       
Sbjct: 211 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN------I 264

Query: 154 KPNTVTYSIIIDGLCKEG---FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            P+  T+S++ID L KEG    VD+A  LF +MK++N+ P++VTY SLI G C  +    
Sbjct: 265 NPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 324

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LL EM + G+QP+V S  ++++ LCK G+++ A      ++      N + YN +++
Sbjct: 325 AIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMIN 384

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           G C  G      +L   ME  GC  +  ++  +I    +  E ++A  +  E+  +G+
Sbjct: 385 GLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P    F +++  L    R     +LF + +  G  P++ T + LIN  C   H  +A ++
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F  +          F P+ +T + +I GLC  G + K      Q+  +    + V+Y +L
Sbjct: 116 FANILKRG------FHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTL 169

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I+G C A +      LL ++    V+P+VV  N I+N LCKN  + +A  +   M+   +
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 229

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN---KEVEE 315
            P+  TY TL+ GFC+ GK+     L   M+      D +++++LI+   K    K V+E
Sbjct: 230 SPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDE 289

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A+SL+ E+  K + P +VTYN+L  GL +    ERA+ L  EM+ + +  D  +Y   +D
Sbjct: 290 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 349

Query: 376 GLC 378
           GLC
Sbjct: 350 GLC 352



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 9/253 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V  +N ++  L KNK       ++  +   G+ PD+ TY+ LI+ FC MG++  
Sbjct: 192 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKE 251

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESR---IVEAAALFTKLKAFGCEPNVITYNT 121
            F +   +      P+V TF+ LI  L  E +   + EA +LF ++K     P+++TYN+
Sbjct: 252 AFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNS 311

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+GLC+  H   A+ L KEM     E G+  +P+  +Y+I++DGLCK G ++ AKE F 
Sbjct: 312 LIDGLCKNHHLERAIALLKEMK----EHGI--QPDVYSYTILLDGLCKGGRLEIAKEFFQ 365

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            +  +  + NV  Y  +I+G C A  + EA  L  +M  +G  PN ++   I+  L +  
Sbjct: 366 HLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKD 425

Query: 242 KMDNASRLLDLMV 254
           + D A ++L  M+
Sbjct: 426 ENDKAEKILREMI 438



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 91/199 (45%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P    + +++        +     L  +    G+ P++ + ++++N  C    +  A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              +++    P+A T NTL+ G C  G+I +       + + G + D  SY  LING CK
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             E +    L  +L    +KP VV YNT+ + L + +    A  ++ EM    ++ D  T
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 370 YRTFIDGLCVRPQVRFTYA 388
           Y T I G C+  +++  ++
Sbjct: 236 YTTLIHGFCIMGKMKEAFS 254



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%)

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A    +LM+     P  F +N ++       +   V  LF   E  G   D  + +ILI
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 100

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           N +C    +  A S++  +  +G  P  +T NTL  GL    + ++ L    ++      
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 365 ADTCTYRTFIDGLC 378
            D  +Y T I+GLC
Sbjct: 161 LDQVSYGTLINGLC 174


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/383 (35%), Positives = 212/383 (55%), Gaps = 12/383 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L K  H    + +   +   G  PD+YTY+ +I+  CK+G+V     +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++    +PN VT+ +LI  LC E+++ EA  L   L + G  P+V T+N+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +  VA+ LF+EM +   E      P+  TY+++ID LC +G +D+A  +  QM+    
Sbjct: 413 TRNHRVAMELFEEMRSKGCE------PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V+TY +LI GFC AN   EA+ +  EM   GV  N V+ N +++ LCK+ ++++A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+    +P+ +TYN+L+  FC  G I +  ++  +M S GC+ D  +Y  LI+G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
           K   VE A  L   +  KGI  T   YN +  GLF  R+   A+ LF EM + N+   D 
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646

Query: 368 CTYRTFIDGLC-----VRPQVRF 385
            +YR    GLC     +R  V F
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDF 669



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 203/376 (53%), Gaps = 5/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N +L  L        V     +++  G+ PD+ T+++LI   C+  Q+    ++
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  TFT++++G   E  +  A  +  ++  FGC  + ++ N +++G C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    ALN  +EM+N +G     F P+  T++ +++GLCK G V  A E+   M  E  
Sbjct: 272 EGRVEDALNFIQEMSNQDG-----FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY S+I G C   +  EA  +L +M+ +   PN V+ N +++ LCK  +++ A+ 
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  ++    + P+  T+N+L+ G CLT       ELF  M S GC+ D+F+YN+LI+  C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +++EAL++  ++   G   +V+TYNTL  G  +  +   A ++F EM+ + V+ ++ 
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506

Query: 369 TYRTFIDGLCVRPQVR 384
           TY T IDGLC   +V 
Sbjct: 507 TYNTLIDGLCKSRRVE 522



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS------------------ 50
           P VS+FN+L+  L +       + + + + S GL PD  T++                  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246

Query: 51  -----------------ILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLC 92
                            ++++ FCK G+V         +  +  F P+  TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +  A  +   +   G +P+V TYN++I+GLC+ G    A+ +  +M   +      
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PNTVTY+ +I  LCKE  V++A EL   +  + + P+V T+ SLI G C   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM  +G +P+  + N++++ LC  GK+D A  +L  M       +  TYNTL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K    +E+F  ME  G   +  +YN LI+G CK++ VE+A  L +++  +G KP  
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TYN+L          ++A  +   M  N    D  TY T I GLC
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 8/375 (2%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           S+F IL+   A+ +  D +LS+   + +  GL PD + Y+ ++N       + L  +   
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+V TF  LIK LC   ++  A  +   + ++G  P+  T+ T++ G    G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LN 189
               AL + ++M     E G  +  + V+ ++I+ G CKEG V+ A     +M  ++   
Sbjct: 239 DLDGALRIREQMV----EFGCSW--SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+  T+ +L++G C A     A  ++  M+ +G  P+V + N +++ LCK G++  A  +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           LD M+  D  PN  TYNTL+   C   ++    EL   + S G   D  ++N LI G C 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            +    A+ L+ E+  KG +P   TYN L   L    + + AL +  +M+ +  A    T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 370 YRTFIDGLCVRPQVR 384
           Y T IDG C   + R
Sbjct: 473 YNTLIDGFCKANKTR 487



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 41/200 (20%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P   ++N LL    +         + + + S G  PD+ TY  LI+  CK G+V 
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +      ++LRS                              ++K     P+   YN +I
Sbjct: 593 VA----SKLLRS-----------------------------IQMKGINLTPHA--YNPVI 617

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF-VDKAKELFLQ 182
            GL R   T  A+NLF+EM   N        P+ V+Y I+  GLC  G  + +A +  ++
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEA-----PPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672

Query: 183 MKYENLNPNVVTYTSLIHGF 202
           +  +   P   +   L  G 
Sbjct: 673 LLEKGFVPEFSSLYMLAEGL 692


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 205/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L     ++     +   K++ S G+ PD+ TY+ L++  CK G+ +    I
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P++ T+ +L++G   +  +VE  AL   +   G  P+   +N LI    +
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F +M            PN VTY  +I  LCK G VD A   F QM  E L
Sbjct: 384 QEKVDEAMLVFSKMRQHG------LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++ YTSLIH  C  + W++A+ L++EM+D+G+  N +  N I++  CK G++  + +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L DLMV+  V+PN  TY+TL+DG+CL GK++   +L  SM S+G K D  +YN LINGYC
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   +++AL+L+ E+   G+ P ++TYN +  GLF  R+   A +L+V +  +    +  
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS 617

Query: 369 TYRTFIDGLC 378
           TY   + GLC
Sbjct: 618 TYNIILHGLC 627



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 189/387 (48%), Gaps = 36/387 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY ILI C C+ G++ LGF   G +++  F    +TFT
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++    C P+V +   L+ GLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             I   FK                    P+ VTYS II  LCK   
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + PN +TY S++HG+C +    EA G L +M   GV+P+VV+ N 
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +M+ LCKNG+   A ++ D M +  + P+  TY TL+ G+   G +  +  L   M   G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D   +NILI  Y K ++V+EA+ +++++   G+ P VVTY  +   L +    + A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCV 379
             F +M    +  +   Y + I  LC+
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCI 453



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 188/363 (51%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       + +L   +   G+ PD + ++ILI  + K  +V    ++
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PNVVT+ ++I  LC    + +A   F ++   G  PN+I Y +LI+ LC 
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ II   CKEG V ++++LF  M    +
Sbjct: 454 FDKWDKAEELILEMLDR----GICL--NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY++LI G+C A   +EA  LL  M   G++P+ V+ N ++N  C+  +MD+A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   V PN  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LFV    N +  +  
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYW 687

Query: 369 TYR 371
           TYR
Sbjct: 688 TYR 690



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 174/402 (43%), Gaps = 41/402 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNIL+   AK +  D  + +F ++   GL P++ TY  +I   CK G V    + 
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428

Query: 69  FGRILRSCFAPNVVTFTSLIKGLC-----------------------------------A 93
           F +++     PN++ +TSLI  LC                                    
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R++E+  LF  +   G +PNVITY+TLI+G C  G    A  L   M        V  
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM------FSVGM 542

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KP+ VTY+ +I+G C+   +D A  LF +M    ++PN++TY  ++ G  H      AK 
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L + +   G Q  + + N+I++ LCKN   D A R+   +   D++    T+N ++    
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+ +  K+LFV+  S G   + ++Y ++         +EE   L+  +   G      
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSG 722

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             N +   L +  +  RA      +     + +  T   FID
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 4/199 (2%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P V TY  LI   C A   +     L  +V +G +   ++   ++  LC + +  +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 248 RL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNIL 303
            + L  M +    P+ F+   L+ G C   +     EL   M      G   D  SY  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING+ K  + ++A S Y+E+  + I P VVTY+++   L + +  ++A+++   M  N V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 364 AADTCTYRTFIDGLCVRPQ 382
             +  TY + + G C   Q
Sbjct: 263 MPNCMTYNSILHGYCSSEQ 281


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  244 bits (622), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 205/377 (54%), Gaps = 7/377 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PPP   F+ +L  L KNKHY TV+SLFK+  S G+ P+L T +ILINCFC + 
Sbjct: 84  MLLMRP-PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLA 142

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++  F +F  IL+  + P+ +T  +LIKGLC    I  A     K+ A G + + ++Y 
Sbjct: 143 HITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYG 202

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLINGLC+ G T     L +++       G   KP+ V Y+ II  LCK   V  A +L+
Sbjct: 203 TLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNV TY +LI+GFC   +  EA  LL EM  + + P+V + N++++ L K 
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  L + M   ++ PN  TY +L+DG C    + R   L   M+  G + D +SY
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL++  CK   +E A   +  L  KG    V TYN + +GL +       + L  +M+G
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436

Query: 361 NDVAADTCTYRTFIDGL 377
                D  T++T I  L
Sbjct: 437 KGCMPDAITFKTIICAL 453



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 155/310 (50%), Gaps = 6/310 (1%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L     P    F +++  L      +   +LF + ++ G  PN+ T N LIN  C 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A ++F  +          + P+ +T + +I GLC  G + +A     ++  +  
Sbjct: 141 LAHITFAFSVFANILKRG------YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGF 194

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V+Y +LI+G C A +      LL ++    V+P+VV    I++ LCKN ++ +A  
Sbjct: 195 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACD 254

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + PN FTYNTL+ GFC+ G +     L   M+      D +++NILI+   
Sbjct: 255 LYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALG 314

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++EA+SL+ E+  K + P +VTY +L  GL +    ERA+ L  +M+   +  D  
Sbjct: 315 KEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 374

Query: 369 TYRTFIDGLC 378
           +Y   +D LC
Sbjct: 375 SYTILLDALC 384



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 6/250 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V  +  ++ CL KNK       L+  +   G+ P+++TY+ LI  FC MG +  
Sbjct: 227 HSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKE 286

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +      P+V TF  LI  L  E +I EA +LF ++K     PN++TY +LI+
Sbjct: 287 AFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLID 346

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+  H   A+ L K+M     E G+  +P+  +Y+I++D LCK G ++ AK+ F  + 
Sbjct: 347 GLCKNHHLERAIALCKKMK----EQGI--QPDVYSYTILLDALCKGGRLENAKQFFQHLL 400

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  + NV TY  +I+G C A  + +   L  +M  +G  P+ ++   I+  L +  + D
Sbjct: 401 VKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDEND 460

Query: 245 NASRLLDLMV 254
            A + L  M+
Sbjct: 461 KAEKFLREMI 470



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%)

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  +    GV PN+ + N+++N  C    +  A  +   +++    P+A T NTL+ G 
Sbjct: 114 SLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGL 173

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G+I R       + + G + D  SY  LING CK  E +    L  +L    +KP V
Sbjct: 174 CFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDV 233

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           V Y T+ H L + ++   A  L+ EM    ++ +  TY T I G C+   ++  ++
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFS 289


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 206/378 (54%), Gaps = 7/378 (1%)

Query: 2   RHMHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +H  P P +  F  LL  +AK K +D V+SLF+++  +G+ P LYT +I++NC C+  
Sbjct: 72  RMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q        G++++  F P++VTFTSL+ G C  +RI +A ALF ++   G  PNV+TY 
Sbjct: 132 QPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYT 191

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+ LC+  H   A+ +F +M    G+ G+  +PN VTY+ ++ GLC+ G    A  L 
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQM----GDNGI--RPNVVTYNSLVSGLCEIGRWSDAAWLL 245

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    + PNV+T+T+LI  F       EAK L   M+   V P+V +   ++N LC  
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G++D A ++  LM      PN  TY TL+ GFC + ++    ++F  M   G   +  +Y
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            +LI GYC     + A  ++N++  +   P + TYN L  GL      E+AL +F  M+ 
Sbjct: 366 TVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRK 425

Query: 361 NDVAADTCTYRTFIDGLC 378
            ++  +  TY   I G+C
Sbjct: 426 REMDINIVTYTIIIQGMC 443



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 172/322 (53%), Gaps = 6/322 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+ CL KN+H +  + +F ++   G+ P++ TY+ L++  C++G+ S    +
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWL 244

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNV+TFT+LI       +I+EA  L+  +      P+V TY  LINGLC 
Sbjct: 245 LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M   NG     + PN VTY+ +I G CK   V+   ++F +M  + L
Sbjct: 305 YGRLDEARQMFYLM-ESNG-----YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N +TYT LI G+C     + A+ +  +M  +   P++ + NV+++ LC NG ++ A  
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M + ++  N  TY  ++ G C  GK+    +LF S+ S G K +  +Y  +I+G+C
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478

Query: 309 KNKEVEEALSLYNELPFKGIKP 330
           +   + EA +L+ ++   G  P
Sbjct: 479 RRGFIHEADALFKKMKEDGFLP 500



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+    K         L+K +  + ++PD++TY+ LIN  C  G++     +
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  + + PN VT+T+LI G C   R+ +   +F ++   G   N ITY  LI G C 
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   VA  +F +M +          P+  TY++++DGLC  G+V+KA  +F  M+   +
Sbjct: 375 VGRPDVAQEVFNQMGSRRAP------PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+VTYT +I G C      +A  L   +  +G++PNV++   +++  C+ G +  A  
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 249 LLDLMVQCDVRPN 261
           L   M +    PN
Sbjct: 489 LFKKMKEDGFLPN 501



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 91/184 (49%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H   +NEA  L   MV     P++V    +++ + K  + D    L + M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P  +T N +M+  C + +  R       M  +G + D  ++  L++G+C    +E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +AL+L++++   G +P VVTY TL H L + R    A+++F +M  N +  +  TY + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 375 DGLC 378
            GLC
Sbjct: 230 SGLC 233



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP + ++N+LL  L  N + +  L +FK +    +  ++ TY+I+I   CK+G+V   F
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
            +F  +      PNV+T+T++I G C    I EA ALF K+K  G  PN
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 209/399 (52%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ       
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         P+TVT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIH  C  + W++AK L++EM+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  + +  N I++  CK G++  + +L DLMV+  V+PN  TY+TL+DG+CL GK++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L  SM S+G K D  +YN LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY ILI   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTY+ II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SILI  + K G+V    ++
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++      P  I YN+LI+ LC 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    +T+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 457 FDKWDKAKELILEMLDR----GICL--DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++TY++LI G+C A   +EA  LL  MV  G++P+ V+ N ++N  CK  +M++A  
Sbjct: 511 KPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 691 TYSLMAENL 699



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M +          P  + Y+ +I  LC     DKAKE
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L L+M    +  + + + S+I   C      E++ L   MV  GV+PN+++ + +++  C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             GKMD A++LL  MV   ++P+  TYNTL++G+C   ++     LF  MES G   D  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++ G  + +    A  LY  +   G +  + TYN + HGL +    + AL++F  +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
              D+  +T T+   I  L
Sbjct: 646 CLTDLQLETRTFNIMIGAL 664


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 211/400 (52%), Gaps = 29/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N L+  L K +  D  +++ + +   G+ PD  TY+I+I  +C +GQ+     
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++  S   P+VVT++ LI+  C   R  EA ++F  +   G +PN   Y+ L++G  
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351

Query: 128 RTGHTIVALNLFKEMTNGN---------------GEIGVV--------------FKPNTV 158
             G  I   +L   M                    + G V               +P+ V
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 411

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +YS +I  LCK G V+ A   F QM  E L+PN++++TSLIHG C   +W + + L  EM
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +++G+ P+ +  N IM+ LCK G++  A    D+++   V+P+  +YNTL+DG+C  GK+
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +    M S+G + D ++YN L+NGY KN  VE+AL+LY E+  K +K   +T N +
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIM 591

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+  +   A +L+++M          TY T + GLC
Sbjct: 592 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 204/417 (48%), Gaps = 46/417 (11%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIGLFPDLYTYSILINCFC 57
              P  V +FN +L  +A+     +        +SLF  +   G+        ILI CFC
Sbjct: 43  QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFC 102

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNV 116
            +G++ L F  F   L++ +    VT   LIKGLC  +R  +A  + F ++   G  P+V
Sbjct: 103 TVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDV 162

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            +YN LI GLC    +  AL L   MT    + G    PN V+Y+ +IDG  KEG VDKA
Sbjct: 163 FSYNALIKGLCVEKKSQEALELLIHMT---ADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             LF +M  + L P+VVTY SLI G C A   ++A  +L  M D+GV P+  + N+++  
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            C  G+++ A RLL  M    ++P+  TY+ L+  +C  G+    + +F SM   G K +
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPN 339

Query: 297 DFSYNILING-----------------------------------YCKNKEVEEALSLYN 321
              Y+IL++G                                   Y K+  V++A++ + 
Sbjct: 340 STIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT 399

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E+   G++P VV+Y+T+ H L +  + E A+  F +M    ++ +  ++ + I GLC
Sbjct: 400 EMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 456



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 195/373 (52%), Gaps = 11/373 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC--KMGQVSLGFVIF--G 70
            ++ G    N+  D +  +F+R+  +G  PD+++Y+ LI   C  K  Q +L  +I    
Sbjct: 131 QLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA 190

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
               +C +PNVV++ ++I G   E  + +A  LF ++   G  P+V+TYN+LI+GLC+  
Sbjct: 191 DGGYNC-SPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ + + M +     GV+  P+T TY+I+I G C  G +++A  L  +M    L P
Sbjct: 250 AMDKAVAILQHMFDK----GVM--PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP 303

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTY+ LI  +C      EA+ +   MV +G +PN    +++++     G + +   LL
Sbjct: 304 DVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 363

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           DLM++  +      +N L+  +   G +++    F  M   G + D  SY+ +I+  CK 
Sbjct: 364 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKT 423

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             VE+A+  +N++  +G+ P ++++ +L HGL  I + ++  +L  EM    +  D    
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 483

Query: 371 RTFIDGLCVRPQV 383
            T +D LC   +V
Sbjct: 484 NTIMDNLCKEGRV 496



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 193/377 (51%), Gaps = 6/377 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    +FNIL+   AK+   D  ++ F  +   GL PD+ +YS +I+  CK G+V     
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F +++    +PN+++FTSLI GLC+     +   L  ++   G  P+ I  NT+++ LC
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + A + F  + +    IGV  KP+ V+Y+ +IDG C  G +D++ +   +M    
Sbjct: 492 KEGRVVEAQDFFDMVIH----IGV--KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIG 545

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TY SL++G+       +A  L  EM  + V+   ++SN++++ L + G++  A 
Sbjct: 546 LRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAR 605

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   MV    +    TYNT++ G C    ++    +F  + S   + D  +++I+IN  
Sbjct: 606 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINAL 665

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   ++EA SL++ +  +G  P V+TY+ +     E    E +  LF+ M+ N  AAD+
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADS 725

Query: 368 CTYRTFIDGLCVRPQVR 384
                 +  L  +  VR
Sbjct: 726 HMLNIIVRRLLEKGDVR 742



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + ++ILL   A       V  L   +   G+  +   ++ILI  + K G V      
Sbjct: 338 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 397

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + ++   P+VV+++++I  LC   R+ +A   F ++ + G  PN+I++ +LI+GLC 
Sbjct: 398 FTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM N          P+ +  + I+D LCKEG V +A++ F  + +  +
Sbjct: 458 IGEWKKVEELAFEMINRG------IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+Y +LI G+C     +E+   L  MV  G++P+  + N ++N   KNG++++A  
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALA 571

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M + DV+  A T N ++ G    G+I   +EL++ M   G +    +YN ++ G C
Sbjct: 572 LYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N  V+EAL ++ +L  K  +  V T++ + + L ++ + + A  LF  M       D  
Sbjct: 632 ENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVI 691

Query: 369 TYRTFI 374
           TY   I
Sbjct: 692 TYSLMI 697



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 6/242 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N L+         D  +    R+ SIGL PD +TY+ L+N + K G+V     +
Sbjct: 513 PDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + R       +T   ++ GL    RIV A  L+ K+   G +  + TYNT++ GLC 
Sbjct: 573 YREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE 632

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +F+++ +        F+ +  T+SI+I+ L K G +D+AK LF  M     
Sbjct: 633 NSCVDEALRMFEDLRSKE------FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGP 686

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY+ +I          E+  L + M   G   +    N+I+  L + G +  A  
Sbjct: 687 VPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGT 746

Query: 249 LL 250
            L
Sbjct: 747 YL 748



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 4/225 (1%)

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A  LF  M    +N        LI  FC     + A       +  G +   V+ N ++ 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 236 ELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-- 292
            LC   + D+A  ++   M +    P+ F+YN L+ G C+  K     EL + M + G  
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 293 -CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
            C  +  SYN +I+G+ K  EV++A  L++E+  +G+ P VVTYN+L  GL + +  ++A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           + +   M    V  DT TY   I G C   Q+       K  SG+
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 299


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 215/371 (57%), Gaps = 9/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK+K+YD V+SLF  +   G+  DLYTY+I+INC C+  +  +   +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+VVT +SLI G C  +R+  A  L +K++   C+ +V+ YNT+I+G C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    AL LF  M       GV  + +TVTY+ ++ GLC  G    A  L   M   ++
Sbjct: 187 TGLVNNALVLFGRMERD----GV--RADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDI 240

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+T+LI+ F     + EAK    EM+ + + P+V + N +++ LC +G++D A +
Sbjct: 241 VPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQ 300

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LDLMV     P+  TYNTL++GFC T +++   +L   M   G   D  ++N +I GY 
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    + A  +++ +   G +P + TY+ L +GL    + E+AL LF  MQ +++  D  
Sbjct: 361 QAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDIT 417

Query: 369 TYRTFIDGLCV 379
           TY   I G+C+
Sbjct: 418 TYNIVIHGMCM 428



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 43/314 (13%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNT 157
           EA  LF  +      P+++ ++ L++ + ++ +  + ++LF  M   G G        + 
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGH-------DL 104

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND---------- 207
            TY+I+I+ LC+      A  +  +M      P+VVT +SLI+GFC  N           
Sbjct: 105 YTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK 164

Query: 208 -------------------------WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
                                     N A  L   M   GV+ + V+ N ++  LC +G+
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
             +A+RL+  MV  D+ PN  T+  L++ F   GK    K+ +  M       D F+YN 
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+G C + +V+EA  + + +  KG  P VVTYNTL +G  + ++ +   KL  EM    
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344

Query: 363 VAADTCTYRTFIDG 376
           +  DT T+ T I G
Sbjct: 345 LVVDTVTFNTIIQG 358



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ V +S ++  + K    D    LF  M+   +  ++ TY  +I+  C  + +  A  +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + +M+  G +P+VV+ + ++N  C+  ++  A  L+  M +   + +   YNT++DGFC 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           TG +N    LF  ME  G + D  +YN L+ G C +    +A  L  ++  + I P V+T
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  L +      +   A K + EM    +  D  TY + I GLC+  QV
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQV 295



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 102/205 (49%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D+A +LF  M      P++V ++ L+     + +++    L   M   G+  ++ + N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N LC+  +   A  ++  M++    P+  T ++L++GFC   ++    +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           CK D   YN +I+G+CK   V  AL L+  +   G++   VTYN+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGL 377
           +L  +M   D+  +  T+   I+  
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAF 254



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D A  L   M+Q    P+   ++ L+     +   + V  LF +ME  G  HD ++YNI
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +IN  C+      ALS+  ++   G +P VVT ++L +G  +  +   A+ L  +M+   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 363 VAADTCTYRTFIDGLC 378
              D   Y T IDG C
Sbjct: 170 CKLDVVIYNTIIDGFC 185



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 57/108 (52%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + +++ILL  L  N   +  L LF+ +    +  D+ TY+I+I+  C +G V   +
Sbjct: 377 SRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAW 436

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            +F  +      P+VVT+T++I G C +    +A  L+ K++  G  P
Sbjct: 437 DLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 205/375 (54%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++++L+  L K       + L + + + G  PD+ TY+IL++  CK  +V+  + +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L +   PN+VT+ SL+ GLC   R+ +A AL   +   GC PNV+TY TLI+GLC+
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M +  G       P+ + Y+++I+GLCK   VD++  L  +     +
Sbjct: 309 VGRVKDACAMLADMIDKGG------TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+S+I+G C +N  +EA  LL+ +  +G  P+V+  + +++ LCK GK+D A  
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L ++M       +  TY+TL+DG C  G+++    L   M  MG      +YN LI G C
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--- 365
               ++EA+ L  E+      P+ VTYN L HG+  + + + A+ L  + +   VAA   
Sbjct: 483 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGT 542

Query: 366 --DTCTYRTFIDGLC 378
             DT  Y + IDGLC
Sbjct: 543 ALDTIAYSSLIDGLC 557



 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 197/371 (53%), Gaps = 1/371 (0%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   +IL+  L K K     L  F+ +   G+  D   Y+ L++   K  ++     I
Sbjct: 42  PNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAI 101

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNVVT+ SLI GLC  +    A  LF  +K+  C P+++TYNTL++GL R
Sbjct: 102 LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR 161

Query: 129 TGHTIVALNLFKEMTNGNG-EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           TG    A+ LF+EM +    ++     PN +TYS++IDGLCK   V +A EL   MK   
Sbjct: 162 TGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+V+TYT L+ G C  +    A  +L EM+D G  PN+V+ N +++ LC+  ++ +A 
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+  M      PN  TY TL+DG C  G++     +   M   G   D   YN+LING 
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V+E+++L       GIKP VVTY+++ +GL    + + A +L + ++      D 
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401

Query: 368 CTYRTFIDGLC 378
             Y T IDGLC
Sbjct: 402 ILYSTLIDGLC 412



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 202/382 (52%), Gaps = 15/382 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N L+  L KN   D    LF+ + S+   P + TY+ L++   + G++  
Sbjct: 108 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 167

Query: 65  GFVIFGRIL--RS------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
              +F  +L  RS      C +PNV+T++ LI GLC  +R+ +A  L   +KA GC P+V
Sbjct: 168 AMALFQEMLDRRSHDMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 226

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           ITY  L++GLC+      A  + +EM +     G V  PN VTY+ ++ GLC+   V  A
Sbjct: 227 ITYTILVDGLCKESKVAAAWEVLREMLDA----GCV--PNLVTYNSLLHGLCRARRVSDA 280

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             L   M      PNVVTY +LI G C      +A  +L +M+D+G  P+++  N+++N 
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 340

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK  ++D +  LL   V   ++P+  TY++++ G C + +++    L + ++S GC  D
Sbjct: 341 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 400

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              Y+ LI+G CK  +V+EA  LY  +   G    VVTY+TL  GL +  + + A  L  
Sbjct: 401 VILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M        T TY + I GLC
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLC 482



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 209/390 (53%), Gaps = 14/390 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL-------NSIGLFPDLYTYSILI 53
           M+ +  SP  V+ +N LL  L +    +  ++LF+ +             P++ TYS+LI
Sbjct: 140 MKSVECSPSMVT-YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLI 198

Query: 54  NCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE 113
           +  CK  +VS    +   +     +P+V+T+T L+ GLC ES++  A  +  ++   GC 
Sbjct: 199 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 258

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PN++TYN+L++GLCR      AL L ++MT           PN VTY  +IDGLCK G V
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKVGRV 312

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A  +   M  +   P+++ Y  LI+G C A+  +E+  LL   V  G++P+VV+ + +
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  LC++ ++D A RLL  +      P+   Y+TL+DG C  GK++   +L+  M   GC
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +Y+ LI+G CK   V+EA  L   +   G  P+ +TYN+L  GL ++   + A++
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L  EM+ ++ A    TY   I G+C   +V
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERV 522



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 179/360 (49%), Gaps = 14/360 (3%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+YTY+ L+  FC+ G++      F  +      PNV   + LI GLC   R ++A   
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  ++  G   + + Y  L++GL +      AL +  EM +   E      PN VTY+ +
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCE------PNVVTYNSL 120

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG- 222
           IDGLCK    D+A+ELF  MK    +P++VTY +L+ G         A  L  EM+D+  
Sbjct: 121 IDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS 180

Query: 223 ------VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
                   PNV++ +V+++ LCK  ++  A  LL+ M      P+  TY  L+DG C   
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K+    E+   M   GC  +  +YN L++G C+ + V +AL+L  ++  +G  P VVTY 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA-RRKGNSG 395
           TL  GL ++ + + A  +  +M       D   Y   I+GLC   QV  + A  R+  SG
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 166/315 (52%), Gaps = 17/315 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K        ++   +   G  PDL  Y++LIN  CK  QV     +
Sbjct: 294 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 353

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R +     P+VVT++S+I GLC  +R+ EA  L   +K+ GC P+VI Y+TLI+GLC+
Sbjct: 354 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +L++ M  G+G        + VTYS +IDGLCK G VD+A  L  +M     
Sbjct: 414 AGKVDEAFDLYEVMA-GDG-----CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 467

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY SLI G C  N  +EA  L+ EM      P+ V+ N++++ +C+  ++D+A  
Sbjct: 468 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVV 527

Query: 249 LLDLMVQCDVRP--------NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           LL+   Q   R         +   Y++L+DG C  G++    + F  M   G   D  +Y
Sbjct: 528 LLE---QAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITY 584

Query: 301 NILINGYCKNKEVEE 315
           +IL+ G  K+K++ E
Sbjct: 585 SILLEGLKKSKDLHE 599



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 143/315 (45%), Gaps = 48/315 (15%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C+P+V TY  L+ G CR G    A   F EM + N        PN    SI+IDGLCK  
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKN------LVPNVFLCSILIDGLCKAK 58

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
               A   F  M+   +  + V YT+L+ G       ++A  +L EM D G +PNVV+ N
Sbjct: 59  RSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYN 118

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK--------- 282
            +++ LCKN + D A  L + M   +  P+  TYNTL+DG   TGK+ R           
Sbjct: 119 SLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178

Query: 283 ---------------------------------ELFVSMESMGCKHDDFSYNILINGYCK 309
                                            EL  SM++ GC  D  +Y IL++G CK
Sbjct: 179 RSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 238

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             +V  A  +  E+   G  P +VTYN+L HGL   R+   AL L  +M       +  T
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298

Query: 370 YRTFIDGLCVRPQVR 384
           Y T IDGLC   +V+
Sbjct: 299 YGTLIDGLCKVGRVK 313



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 7/243 (2%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           + +P+  TY+ ++ G C+ G +D+A+  F +M+ +NL PNV   + LI G C A    +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                 M   G+  + V    +++ L K  ++D A  +L  M      PN  TYN+L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK----- 326
            C   + +R +ELF  M+S+ C     +YN L++G  +  ++E A++L+ E+  +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 327 --GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
                P V+TY+ L  GL +  +  +A++L   M+    + D  TY   +DGLC   +V 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 385 FTY 387
             +
Sbjct: 244 AAW 246



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 12/253 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L ++   D    L   + S G  PD+  YS LI+  CK G+V   F +
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +       +VVT+++LI GLC   R+ EA  L  ++   G  P+ +TYN+LI GLC 
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A+ L +EM   N        P+ VTY+I+I G+C+   VD A  L  Q K   +
Sbjct: 484 LNHLDEAIELVEEMERSN------CAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCV 537

Query: 189 NP-----NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                  + + Y+SLI G C A    EA     EM+D GV P+ ++ ++++  L K+  +
Sbjct: 538 AAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597

Query: 244 DNASRL-LDLMVQ 255
                L LD MVQ
Sbjct: 598 HELRHLVLDQMVQ 610



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 4/217 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  ++ L+  L K    D    L++ +   G   D+ TYS LI+  CK G+V    +
Sbjct: 398 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHL 457

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R++R    P+ +T+ SLIKGLC  + + EA  L  +++   C P+ +TYN LI+G+C
Sbjct: 458 LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 517

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R      A+ L ++        G     +T+ YS +IDGLCK G V +A + F +M    
Sbjct: 518 RMERVDSAVVLLEQAKARCVAAGGT-ALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNG 576

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           + P+ +TY+ L+ G   + D +E + L++   DQ VQ
Sbjct: 577 VIPDHITYSILLEGLKKSKDLHELRHLVL---DQMVQ 610



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP   ++N L+  L    H D  + L + +      P   TY+ILI+  C+M +V    
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526

Query: 67  VIFGRILRSCFAP-----NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V+  +    C A      + + ++SLI GLC   R+ EA   F ++   G  P+ ITY+ 
Sbjct: 527 VLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586

Query: 122 LINGL 126
           L+ GL
Sbjct: 587 LLEGL 591


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 7/385 (1%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P +  F  LL   A  + Y+TV+   +++   G+  DLY+++ILI+CFC+  ++
Sbjct: 63  VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S    + G++++  + P++VTF SL+ G C  +RI +A +L   +   G EPNV+ YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+GLC+ G   +AL L  EM             + VTY+ ++ GLC  G    A  +   
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKG------LGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M   ++NP+VVT+T+LI  F    + +EA+ L  EM+   V PN V+ N I+N LC +G+
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A +  DLM      PN  TYNTL+ GFC    ++   +LF  M   G   D F+YN 
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+GYC+  ++  AL ++  +  + + P ++T+  L HGL    + E AL  F +M+ ++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTY 387
                  Y   I GLC   +V   +
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAW 441



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 160/320 (50%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  L KN   +  L L   +   GL  D+ TY+ L+   C  G+ S    +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVTFT+LI     +  + EA  L+ ++     +PN +TYN++INGLC 
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F  M +        F PN VTY+ +I G CK   VD+  +LF +M  E  
Sbjct: 294 HGRLYDAKKTFDLMASKG-----CF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N ++ TY +LIHG+C       A  +   MV + V P++++  ++++ LC NG++++A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             D M + +       YN ++ G C   K+ +  ELF  +   G K D  +Y I+I G C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467

Query: 309 KNKEVEEALSLYNELPFKGI 328
           KN    EA  L   +  +GI
Sbjct: 468 KNGPRREADELIRRMKEEGI 487



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 35/210 (16%)

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVV-------------------------------- 228
           GF H+  + +A  L  EMV     P++V                                
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 229 ---SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
              S  ++++  C+  ++  A  +L  M++    P+  T+ +L+ GFCL  +I     L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           + M   G + +   YN LI+G CKN E+  AL L NE+  KG+   VVTYNTL  GL   
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFID 375
            +   A ++  +M    +  D  T+   ID
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALID 254



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + ++A  L   MV     P+   +  L+       +   V      ME  G  HD +S+ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI+ +C+   +  ALS+  ++   G +P++VT+ +L HG   + +   A  L + M  +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 362 DVAADTCTYRTFIDGLC 378
               +   Y T IDGLC
Sbjct: 171 GYEPNVVVYNTLIDGLC 187


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/387 (37%), Positives = 215/387 (55%), Gaps = 16/387 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   HP PP +SSFN LLG LAK  HY  + SL+ ++   GL PDL+T +IL NC C + 
Sbjct: 81  MMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLN 139

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGL---CAESRIVEAAALFTKLKAFGCEPNVI 117
           +VS G      ILR  + P++VT+ +LIKGL   C      EA  +F ++KA G  PNVI
Sbjct: 140 RVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVI 199

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV---D 174
           +Y++L++G C  G    +  LF EM +     GV  +PN V ++++ID LCKEG +    
Sbjct: 200 SYSSLVHGFCCAGKLEESKRLFNEMVDQ----GV--QPNLVQFNVLIDILCKEGKIGDLS 253

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            A++LFL M  +    N ++YT LI+G+C      EA  L  EM   G +PNV + + ++
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 313

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             L + GK+ +A++L  +M    +  ++  Y   +DG C  G +    ELF  ++S   K
Sbjct: 314 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 373

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  SY+ LI+G CK  +VE A   + +L  +G++P VVT N + HG   + Q ++A  L
Sbjct: 374 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANIL 433

Query: 355 FVEMQG---NDVAADTCTYRTFIDGLC 378
           F +M+    N    D  TY T + G C
Sbjct: 434 FEKMEKMEENGCTPDIITYNTLLRGFC 460



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 7/197 (3%)

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD-- 244
           NL+P     + +       +  N    +L+   D+G+      S+ + N  CK G +D  
Sbjct: 15  NLSPLCTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQHRLSSFLRN--CKTGNIDVI 72

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A    DLM++    P   ++N L+ G       +++  L+  M   G   D F+ NIL 
Sbjct: 73  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF---EIRQAERALKLFVEMQGN 361
           N  C    V E L+    +  +G  P +VTYNTL  GL+   ++   + A ++F EM+  
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQ 192

Query: 362 DVAADTCTYRTFIDGLC 378
            +  +  +Y + + G C
Sbjct: 193 GMIPNVISYSSLVHGFC 209



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 34/226 (15%)

Query: 168 CKEGFVD--KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           CK G +D  +A   F  M   +  P + ++  L+ G    N +++   L  +M   G+ P
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++ + N++ N LC   ++      +  +++    P+  TYNTL+ G              
Sbjct: 124 DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKG-------------- 169

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                             + G CK    +EA  ++ E+  +G+ P V++Y++L HG    
Sbjct: 170 ------------------LYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCA 211

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
            + E + +LF EM    V  +   +   ID LC   ++    + RK
Sbjct: 212 GKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARK 257


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 7/385 (1%)

Query: 4   MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P +  F  LL   A  + Y+TV+   +++   G+  DLY+++ILI+CFC+  ++
Sbjct: 63  VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S    + G++++  + P++VTF SL+ G C  +RI +A +L   +   G EPNV+ YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+GLC+ G   +AL L  EM             + VTY+ ++ GLC  G    A  +   
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKG------LGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M   ++NP+VVT+T+LI  F    + +EA+ L  EM+   V PN V+ N I+N LC +G+
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A +  DLM      PN  TYNTL+ GFC    ++   +LF  M   G   D F+YN 
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+GYC+  ++  AL ++  +  + + P ++T+  L HGL    + E AL  F +M+ ++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTY 387
                  Y   I GLC   +V   +
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAW 441



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 212/389 (54%), Gaps = 11/389 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  +L  +AK   +D V+ L+ ++ ++G+  DLY+++ILI+CFC+  ++SL   +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++VT  SL+ G C  +R  EA +L   +  FG  PNV+ YNT+INGLC+
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +F  M           + + VTY+ +I GL   G    A  L   M    +
Sbjct: 722 NRDLNNALEVFYCMEKKG------IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+ +T+LI  F    +  EA+ L  EM+ + V PNV + N ++N  C +G + +A  
Sbjct: 776 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 835

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV     P+  TYNTL+ GFC + ++    +LF  M   G   D F+YN LI+GYC
Sbjct: 836 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 895

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++  A  ++N +   G+ P +VTYN L   L    + E+AL +  ++Q +++  D  
Sbjct: 896 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 955

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKG 392
           TY   I GLC   +++     F    RKG
Sbjct: 956 TYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 6/341 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  +N ++  L KN+  +  L +F  +   G+  D  TY+ LI+     G+ +    +
Sbjct: 707  PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +++    PNV+ FT+LI     E  ++EA  L+ ++      PNV TYN+LING C 
Sbjct: 767  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  +F  M +          P+ VTY+ +I G CK   V+   +LF +M Y+ L
Sbjct: 827  HGCLGDAKYMFDLMVSKGC------FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              +  TY +LIHG+C A   N A+ +   MVD GV P++V+ N++++ LC NGK++ A  
Sbjct: 881  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 940

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +++ + + ++  +  TYN ++ G C T K+     LF S+   G K D  +Y  +I+G C
Sbjct: 941  MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
            +     EA  L   +   G  P+   Y+      +    AE
Sbjct: 1001 RKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 1041



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  L KN   +  L L   +   GL  D+ TY+ L+   C  G+ S    +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVTFT+LI     +  + EA  L+ ++     +PN +TYN++INGLC 
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F  M +          PN VTY+ +I G CK   VD+  +LF +M  E  
Sbjct: 294 HGRLYDAKKTFDLMASKGC------FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N ++ TY +LIHG+C       A  +   MV + V P++++  ++++ LC NG++++A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             D M + +       YN ++ G C   K+ +  ELF  +   G K D  +Y I+I G C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467

Query: 309 KNKEVEEALSLYNELPFKGI 328
           KN    EA  L   +  +GI
Sbjct: 468 KNGPRREADELIRRMKEEGI 487



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 186/450 (41%), Gaps = 90/450 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K +  D  + LF+R++  G   D++TY+ LI+ +C++G++ +   I
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+++T   L+ GLC    I  A   F  ++       ++ YN +I+GLC+
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  +       GV  KP+  TY+I+I GLCK G   +A EL  +MK E +
Sbjct: 434 ADKVEKAWELFCRLPVE----GV--KPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487

Query: 189 NPNVVTYTSLIHGFCHAND---------WNEAKGLLIEMVDQGVQPNVVSSNV------- 232
              +      +     +N          W  +K     M  Q + P   SS+V       
Sbjct: 488 ICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWM--QRLIPIAFSSSVKGFVRRH 545

Query: 233 ------------------------------IMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                                         + NEL    K D+A  L   M+Q    P+ 
Sbjct: 546 YLLLERGNNPETSLSRSFSGASHHHHYRERLRNEL-HCIKFDDAFSLFCEMLQSRPIPSI 604

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI------------------ 304
             +  ++       K + V  L+  ME++G  HD +S+ ILI                  
Sbjct: 605 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 664

Query: 305 -----------------NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
                            NG+C+    +EA+SL + +   G  P VV YNT+ +GL + R 
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              AL++F  M+   + AD  TY T I GL
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGL 754



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A +LF ++      P+++ +  ++  + +     + + L+ +M N    +G+    +  
Sbjct: 587 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN----LGI--SHDLY 640

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +++I+I   C+   +  A  L  +M      P++VT  SL++GFC  N + EA  L+  M
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G  PNVV  N ++N LCKN  ++NA  +   M +  +R +A TYNTL+ G   +G+ 
Sbjct: 701 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L   M       +   +  LI+ + K   + EA +LY E+  + + P V TYN+L
Sbjct: 761 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +G         A  +F  M       D  TY T I G C   +V
Sbjct: 821 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 35/210 (16%)

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVV-------------------------------- 228
           GF H+  + +A  L  EMV     P++V                                
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 229 ---SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
              S  ++++  C+  ++  A  +L  M++    P+  T+ +L+ GFCL  +I     L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           + M   G + +   YN LI+G CKN E+  AL L NE+  KG+   VVTYNTL  GL   
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFID 375
            +   A ++  +M    +  D  T+   ID
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALID 254



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + ++A  L   MV     P+   +  L+       +   V      ME  G  HD +S+ 
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI+ +C+   +  ALS+  ++   G +P++VT+ +L HG   + +   A  L + M  +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 362 DVAADTCTYRTFIDGLC 378
               +   Y T IDGLC
Sbjct: 171 GYEPNVVVYNTLIDGLC 187


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 205/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N++L  L K   +DT+  ++  + + G  P++ TY  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P VV +T LI+GLC ESRI EA ++F  ++  G  PN+ TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL L++EM  G+G +     PN VT+ I+IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  Y  LI G+C A + +EA  L  E+    + P+V + ++++  LC   +M+ A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PNA TYNTL+DG+C  G + +  E+   M   G + +  +++ LI+GYC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E A+ LY E+  KG+ P VV Y  L  G F+    + A +L  EMQ   +  +  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 369 TYRTFIDGLC 378
           T    IDGLC
Sbjct: 510 TLSCLIDGLC 519



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++IL+  L      +    L + +   G  P+  TY+ LI+ +CK G +  
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++      PN++TF++LI G C   ++  A  L+T++   G  P+V+ Y  LI+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           G  + G+T  A  L KEM            PN  T S +IDGLCK+G +  A +LFL
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAG------LHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 173 VDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD----------- 220
            ++A ELF  + +  +L  N   Y+++IH    A  + +A+ L+ +++            
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRIC 109

Query: 221 -------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                    ++ +  + NV    +    +M      L +  + DV P     N ++DG  
Sbjct: 110 CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLV 169

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+ + + +++  M + G   +  +Y  LI+G C+  +  +A  L++E+  K I PTVV
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            Y  L  GL    +   A  +F  M+ + +  +  TY T +DG C    V+
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 121/276 (43%), Gaps = 22/276 (7%)

Query: 67  VIFGRILRSCFAPNVVTFTSL--IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           ++F RIL      ++ +F+ +  +K    +S +VE   +   +  FG EP +    +LI+
Sbjct: 615 LLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLIS 674

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
               TG+   A N+F E+ +           N ++++ +I         +KA +LF QM+
Sbjct: 675 MYSATGNVADAHNMFDEIPS----------KNLISWTSVISAYVDNQRPNKALQLFRQMQ 724

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +++ P++VT T  +         +  + +   +  +G+  ++  +N ++N   K G++ 
Sbjct: 725 MDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIG 784

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNIL 303
            A R         V PN  T+  ++      G +   K+ F SM E    +     +  +
Sbjct: 785 TARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCM 838

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           ++  C+   + EA     ++P   ++P  V + TL 
Sbjct: 839 VDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLL 871



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/222 (20%), Positives = 85/222 (38%), Gaps = 19/222 (8%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  ++     N+  +  L LF+++    + PD+ T ++ ++    +G + +G  I   I
Sbjct: 699 SWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYI 758

Query: 73  LRSCFAPNVVTFTSLIK--GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                  ++    SLI     C E       +L          PN +T+  ++      G
Sbjct: 759 RHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL--------PNDVTFMGVLMACSHAG 810

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                   F+ M           +P    +  ++D LC+ G + +A E  L+M    + P
Sbjct: 811 LVEEGKQHFRSMKEDYS-----LRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRP 862

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           N V + +L+ G C      + K L+   + Q   P   S  V
Sbjct: 863 NAVVWRTLL-GACSLQGMWDKKMLVRNQIKQRRDPGCSSIEV 903


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 212/370 (57%), Gaps = 9/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ +L  +AK+K+YD V+SLF  +   G+  DLY+Y+I+INC C+  +  +   +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+VVT +SLI G C  +R+ +A  L +K++  G  P+V+ YNT+I+G C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF  M       GV  + + VTY+ ++ GLC  G    A  L   M   ++
Sbjct: 187 IGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+T++I  F     ++EA  L  EM  + V P+V + N ++N LC +G++D A +
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LDLMV     P+  TYNTL++GFC + +++   +LF  M   G   D  +YN +I GY 
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    + A  +++ +     +P + TY+ L +GL    + E+AL LF  MQ +++  D  
Sbjct: 361 QAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417

Query: 369 TYRTFIDGLC 378
           TY   I G+C
Sbjct: 418 TYNIVIHGMC 427



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 59/108 (54%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + +++ILL  L  N   +  L LF+ +    +  D+ TY+I+I+  CK+G V   +
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            +F  +      P+VV++T++I G C + +  ++  L+ K++  G  P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/370 (35%), Positives = 203/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+  L+K  H    L +   +   G  PD+YTY+ LI+  CK+G+V     +
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++    +PN VT+ ++I  LC E+++ EA  L   L   G  P+V TYN+LI GLC 
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           + +  VA+ L+KEM            P+  TY+++ID LC  G + +A  L  +M+    
Sbjct: 419 SRNHTVAMELYKEMKTKGCH------PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NV+TY +LI GFC      EA+ +  +M  QGV  N V+ N +++ LCK+ +++ AS+
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   +RP+ FTYN+L+  FC  G I +  ++  +M S GC+ D  +Y  LI G C
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC 592

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VE A  L   +  KGI  T   YN +   LF  ++++ A++LF EM     A D  
Sbjct: 593 KAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAV 652

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 653 TYKIVFRGLC 662



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 198/371 (53%), Gaps = 5/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  L        V      + S G+ PD+ T++ILI   C+  Q+    ++   + 
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME 222

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+  TFT++++G   E  +  A  +  ++   GC    +T N L+NG C+ G   
Sbjct: 223 DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE 282

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL   +EM+   G     F P+  T++++++GL K G V  A E+   M  E  +P++ 
Sbjct: 283 EALRFIEEMSLREG-----FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY 337

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY SLI G C   + +EA  +L +M+++   PN V+ N I++ LCK  +++ A++L  ++
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVL 397

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+  TYN+L+ G CL+       EL+  M++ GC  D+F+YN+LI+  C   ++
Sbjct: 398 TGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL 457

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EAL+L  E+   G    V+TYNTL  G  + ++   A ++F +M+   V+ ++ TY T 
Sbjct: 458 QEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTL 517

Query: 374 IDGLCVRPQVR 384
           IDGLC   +V 
Sbjct: 518 IDGLCKSERVE 528



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 65/312 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L  ++++   + L+K + + G  PD +TY++LI+  C  G++     +
Sbjct: 404 PDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNL 463

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  A NV+T+ +LI G C   RI EA  +F +++  G   N +TYNTLI+GLC+
Sbjct: 464 LKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVF-----------KPNTVT 159
           +     A  L  +M                      G+I               +P+ VT
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583

Query: 160 YSIIIDGLCKEGFVDKAKELF--LQMKYENLNP--------------------------- 190
           Y  +I GLCK G V+ A +L   +QMK  NL P                           
Sbjct: 584 YGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643

Query: 191 ------NVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 + VTY  +  G C       EA   ++EM+++G  P   S  ++   L     +
Sbjct: 644 EKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMV 703

Query: 244 DNASRLLDLMVQ 255
               +L+D++++
Sbjct: 704 GTLIKLIDMVME 715



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 84/346 (24%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PN  T   L++ L R   +   ++LF   +         FKP++  +  ++  L K G  
Sbjct: 52  PN-FTPTQLLHSLRREEDSSAVIHLFYWASKQPN-----FKPSSSIFKEVLHKLGKAGEF 105

Query: 174 DKAKELFLQMKYENLNPNVVTYTSL---IHGFCHANDWNEA------------------- 211
           D  K++  +MK   ++ +V+   SL   I  +     +NE                    
Sbjct: 106 DAMKDILKEMK---ISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHF 162

Query: 212 ------------KGLLIE-----MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
                       K  L+E     MV +G++P+V + N+++  LC+  ++  A  L++ M 
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME 222

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKIN---RVKELFVS------------------------ 287
              + P+  T+ T+M GF   G ++   RVKE  V                         
Sbjct: 223 DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE 282

Query: 288 -----MESMGCKH----DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +E M  +     D +++N+L+NG  K   V+ AL + + +  +G  P + TYN+L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             GL ++ + + A+K+  +M   D + +T TY T I  LC   QV 
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 212/370 (57%), Gaps = 9/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ +L  +AK+K+YD V+SLF  +   G+  DLY+Y+I+INC C+  +  +   +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  + P+VVT +SLI G C  +R+ +A  L +K++  G  P+V+ YNT+I+G C+
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF  M       GV  + + VTY+ ++ GLC  G    A  L   M   ++
Sbjct: 128 IGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+T++I  F     ++EA  L  EM  + V P+V + N ++N LC +G++D A +
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 241

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LDLMV     P+  TYNTL++GFC + +++   +LF  M   G   D  +YN +I GY 
Sbjct: 242 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 301

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    + A  +++ +     +P + TY+ L +GL    + E+AL LF  MQ +++  D  
Sbjct: 302 QAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358

Query: 369 TYRTFIDGLC 378
           TY   I G+C
Sbjct: 359 TYNIVIHGMC 368



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 81/161 (50%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+     P++V  + +++++ K+   D    L   M  C +  + ++YN +++  C   +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                 +   M   G + D  + + LING+C+   V +A+ L +++   G +P VV YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  G  +I     A++LF  M+ + V AD  TY + + GLC
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 161



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 59/108 (54%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + +++ILL  L  N   +  L LF+ +    +  D+ TY+I+I+  CK+G V   +
Sbjct: 318 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 377

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            +F  +      P+VV++T++I G C + +  ++  L+ K++  G  P
Sbjct: 378 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 205/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N++L  L K   +DT+  ++  + + G  P++ TY  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P VV +T LI+GLC ESRI EA ++F  ++  G  PN+ TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL L++EM  G+G +     PN VT+ I+IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  Y  LI G+C A + +EA  L  E+    + P+V + ++++  LC   +M+ A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PNA TYNTL+DG+C  G + +  E+   M   G + +  +++ LI+GYC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E A+ LY E+  KG+ P VV Y  L  G F+    + A +L  EMQ   +  +  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 369 TYRTFIDGLC 378
           T    IDGLC
Sbjct: 510 TLSCLIDGLC 519



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 197/410 (48%), Gaps = 42/410 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + IL+  L          S+F+ + + G+ P+LYTY+ +++ +CK+  V     +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L     PNVVTF  LI GLC    +V A      + +FG  PN+  YN LI+G C+
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 129 TGHTIVALNLFKE-------------------------MTNGNGEIGVV----FKPNTVT 159
            G+   AL+L  E                         M   +G +  +    F PN VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +IDG CKEG ++KA E+  QM  + + PN++T+++LI G+C A     A GL  EMV
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+VV+   +++   K+G    A RL   M +  + PN FT + L+DG C  G+I+
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 280 RVKELFVS---MESMGCKHDDFS----------YNILINGYCKNKEVEEALSLYNELPFK 326
              +LF++    ++ G K ++            Y  LI G C +  + +A   ++++   
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           G++P V T   +  G F        + L  ++    +  ++  YR    G
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 184/365 (50%), Gaps = 19/365 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F IL+  L K     +       + S G+ P+++ Y+ LI+ +CK G +S    +
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I +    P+V T++ LIKGLC   R+ EA  L  ++K  G  PN +TYNTLI+G C+
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ +  +MT    E G+  +PN +T+S +IDG CK G ++ A  L+ +M  + L
Sbjct: 416 EGNMEKAIEVCSQMT----EKGI--EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV YT+LI G     +  EA  L  EM + G+ PNV + + +++ LCK+G++ +A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 249 LLDLMVQCDV-------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           L       D               PN   Y  L+ G C  G+I +  + F  M   G + 
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D F+  ++I G+ +   + + + L  ++   GI P    Y  L  G  E    + AL+  
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCS 649

Query: 356 VEMQG 360
            ++ G
Sbjct: 650 EDLSG 654



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 19/285 (6%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++IL+  L      +    L + +   G  P+  TY+ LI+ +CK G +  
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++      PN++TF++LI G C   ++  A  L+T++   G  P+V+ Y  LI+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL--- 181
           G  + G+T  A  L KEM            PN  T S +IDGLCK+G +  A +LFL   
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAG------LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 182 ----------QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
                     ++     +PN V YT+LI G C      +A     +M   G++P+V +  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           VI+    +   + +   L   +++  + PN+  Y  L  G+  +G
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 173 VDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD----------- 220
            ++A ELF  + +  +L  N   Y+++IH    A  + +A+ L+ +++            
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRIC 109

Query: 221 -------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                    ++ +  + NV    +    +M      L +  + DV P     N ++DG  
Sbjct: 110 CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLV 169

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+ + + +++  M + G   +  +Y  LI+G C+  +  +A  L++E+  K I PTVV
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            Y  L  GL    +   A  +F  M+ + +  +  TY T +DG C    V+
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 25/386 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + SFNIL+ C          LS F +L  +G  PD+ T++ L++  C   ++S    
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 68  IFGRILRSCF---------------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           +FG ++ + F                P V+TF +LI GLC E R++EAAAL  K+   G 
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
             +V+TY T++NG+C+ G T  ALNL  +M   +       KP+ V YS IID LCK+G 
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGH 311

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
              A+ LF +M  + + PNV TY  +I GFC    W++A+ LL +M+++ + P+V++ N 
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K GK+  A +L D M+   + P+  TYN+++ GFC   + +  K +F  M S  
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D  ++N +I+ YC+ K V+E + L  E+  +G+     TYNTL HG  E+     A 
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM  + V  DT T    + G C
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFC 513



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 191/367 (52%), Gaps = 10/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+ H+     LF  +   G+ P+++TY+ +I+ FC  G+ S    +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V+TF +LI     E ++ EA  L  ++      P+ +TYN++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +          P+ VT++ IID  C+   VD+  +L  ++    L
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  TY +LIHGFC  ++ N A+ L  EM+  GV P+ ++ N+++   C+N K++ A  
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +++    +  +   YN ++ G C   K++   +LF S+   G + D  +YN++I+G+C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + +A  L++++   G +P   TYNTL  G  +  + +++++L  EM+ N  + D  
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643

Query: 369 TYRTFID 375
           T +   D
Sbjct: 644 TIKMVAD 650



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 13/341 (3%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +I  F +M +  +   ++ ++       N+ +F  LIK  C   ++  + + F KL   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFKPNTVTYSI 162
            +P+V+T+NTL++GLC       AL LF  M            +  + +   P  +T++ 
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+GLC EG V +A  L  +M  + L+ +VVTY ++++G C   D   A  LL +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++P+VV  + I++ LCK+G   +A  L   M++  + PN FTYN ++DGFC  G+ +  +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M       D  ++N LI+   K  ++ EA  L +E+  + I P  VTYN++ +G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +  + + A  +F  M   DV     T+ T ID  C   +V
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRV 448



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 2/170 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   + NILL    +N+  +  L LF+ +    +  D   Y+I+I+  CK  +V  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      P+V T+  +I G C +S I +A  LF K+K  G EP+  TYNTLI 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           G  + G    ++ L  EM   NG  G  F    V   +I DG   + F D
Sbjct: 616 GCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA-DLITDGRLDKSFSD 663



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 15/221 (6%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A + F  M         V    +I  F   N  + A  L  +M  + +  N+ S N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN------------- 279
           ++   C   K+  +      + +   +P+  T+NTL+ G CL  +I+             
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 280 --RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                 LF  M  +G      ++N LING C    V EA +L N++  KG+   VVTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +G+ ++   + AL L  +M+   +  D   Y   ID LC
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    D MV+      A   N ++  F    + +    L+  ME      + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL-FEIRQAE------------ 349
           LI  +C   ++  +LS + +L   G +P VVT+NTL HGL  E R +E            
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 350 --RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              A+ LF +M    +     T+ T I+GLC+  +V
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 204/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N++L  L K   +DT+  ++  + + G  P++ TY  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P VV +T LI+GLC ESRI EA ++F  ++  G  PN+ TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL L+ EM  G+G +     PN VT+ I+IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYXEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  Y  LI G+C A + +EA  L  E+    + P+V + ++++  LC   +M+ A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PNA TYNTL+DG+C  G + +  E+   M   G + +  +++ LI+GYC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E A+ LY E+  KG+ P VV Y  L  G F+    + A +L  EMQ   +  +  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 369 TYRTFIDGLC 378
           T    IDGLC
Sbjct: 510 TLSCLIDGLC 519



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 197/410 (48%), Gaps = 42/410 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + IL+  L          S+F+ + + G+ P+LYTY+ +++ +CK+  V     +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L     PNVVTF  LI GLC    +V A      + +FG  PN+  YN LI+G C+
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 129 TGHTIVALNLFKE-------------------------MTNGNGEIGVV----FKPNTVT 159
            G+   AL+L  E                         M   +G +  +    F PN VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +IDG CKEG ++KA E+  QM  + + PN++T+++LI G+C A     A GL  EMV
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+VV+   +++   K+G    A RL   M +  + PN FT + L+DG C  G+I+
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 280 RVKELFVS---MESMGCKHDDFS----------YNILINGYCKNKEVEEALSLYNELPFK 326
              +LF++    ++ G K ++            Y  LI G C +  + +A   ++++   
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           G++P V T   +  G F        + L  ++    +  ++  YR    G
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 169/405 (41%), Gaps = 55/405 (13%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++IL+  L      +    L + +   G  P+  TY+ LI+ +CK G +  
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++      PN++TF++LI G C   ++  A  L+T++   G  P+V+ Y  LI+
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL--- 181
           G  + G+T  A  L KEM            PN  T S +IDGLCK+G +  A +LFL   
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAG------LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 182 ----------QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
                     ++     +PN V YT+LI G C      +A     +M   G++P+V +  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG------------FCLTG--K 277
           VI+    +   + +   L   +++  + PN+  Y  L  G            FC  G   
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQP 655

Query: 278 INRVK-------------ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           ++RV              +L V  E   C H  +     I+ +         L  Y    
Sbjct: 656 LDRVNSEPWGSYTIRSRFQLCVVTEKKEC-HSSYLTAFGIHSF--------VLLWYFHTI 706

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            K   P  +     F G    ++  +AL+LF +MQ +D   D  T
Sbjct: 707 LKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVT 751



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 21/232 (9%)

Query: 173 VDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP------ 225
            ++A ELF  + +  +L  N   Y+++IH    A  + +A+ L+ +++ Q +Q       
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLI-QCLQKSRRSRI 108

Query: 226 -----NVVSS--------NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                NV+S         NV    +    +M      L +  + DV P     N ++DG 
Sbjct: 109 CCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGL 168

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G+ + + +++  M + G   +  +Y  LI+G C+  +  +A  L++E+  K I PTV
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           V Y  L  GL    +   A  +F  M+ + +  +  TY T +DG C    V+
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 21/235 (8%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  +      +G    ++  +  L LF+++      PD+ T ++ ++    +G + +G
Sbjct: 710 PSPHEILKKVPFIG-QKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMG 768

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             I   I       ++    SLI        I  A  LF   +    + +V T+ ++I G
Sbjct: 769 EWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVG 824

Query: 126 LCRTGHTIVALNLFKEMT-----------NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
               G    AL LF EM            NG  E  +V  PN VT+  ++      G V+
Sbjct: 825 HALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVL-PNDVTFMGVLMACSHAGLVE 883

Query: 175 KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           + K+ F  MK + +L P +  +  ++   C A    EA   +++M    V+PN V
Sbjct: 884 EGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAV 935



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 44/262 (16%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
            M    P + +  + L   A     D    +   +   GL  DL   + LIN + K G++
Sbjct: 741 QMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEI 800

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE--------- 113
                +F    +     +V T+TS+I G     +  EA  LFT++K              
Sbjct: 801 GTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGE 856

Query: 114 -------PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
                  PN +T+  ++      G        F+ M           +P    +  ++D 
Sbjct: 857 XESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYS-----LRPRISHFGCMVDL 911

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN-----------EAKGLL 215
           LC+ G + +A E  L+M    + PN V + +L+       D N           EA+  L
Sbjct: 912 LCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQL 968

Query: 216 IEMVDQGVQPNVVSSNVIMNEL 237
           +E+     +P+ V  NVIM+ L
Sbjct: 969 LEL-----EPSHVGDNVIMSNL 985



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/348 (20%), Positives = 126/348 (36%), Gaps = 60/348 (17%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           DT  S    L+     P+   Y+ LI   C  G++      F  +  S   P+V T   +
Sbjct: 538 DTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVI 597

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN--- 144
           I+G      + +   L   +   G  PN   Y  L  G   +G+   AL+   E      
Sbjct: 598 IQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLD 657

Query: 145 -------GNGEIGVVFKPNTVT-----YSIIIDGLCKEGFV------------------- 173
                  G+  I   F+   VT     +S  +       FV                   
Sbjct: 658 RVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILK 717

Query: 174 -------------DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
                        +KA +LF QM+ ++  P++VT T  +         +  + +   +  
Sbjct: 718 KVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRH 777

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+  ++  +N ++N   K G++  A RL D   + DV     T+ +++ G  L G+   
Sbjct: 778 RGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEE 833

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             +LF  M+           N       +N E E +L L N++ F G+
Sbjct: 834 ALQLFTEMKET---------NKRARKNKRNGEXESSLVLPNDVTFMGV 872


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 207/387 (53%), Gaps = 22/387 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTV----------------LSLFKRLNSIGLFPDLYTYSI 51
           PP + ++N ++  L K +  D                  + L K+++  GL PD+ TYS+
Sbjct: 171 PPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSL 230

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           LI+ +CK+G+ +    IF  ++R    P+  T+ +L+ G   +  +V+   L   +   G
Sbjct: 231 LIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDG 290

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
                  +N LI    +      A+  F EM          F PN VTY+ +ID LCK G
Sbjct: 291 IPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG------FSPNVVTYTTVIDILCKAG 344

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V+ A   F QM  E L+P+++T+TSLIHG C   +W + + L  EM+++G+ PN +  N
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            IM+ LCK G++  A    D ++   V+P+  +Y  L+DG+CL GK++   +L   M S+
Sbjct: 405 TIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D+ +Y+ L+NGYCKN  V++AL+LY E+  K +KP  +TYN + HGLF   +   A
Sbjct: 465 GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAA 524

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + ++++  + +     TY   + GLC
Sbjct: 525 REFYMKIVDSGIQLGINTYNIVLGGLC 551



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 199/394 (50%), Gaps = 11/394 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL   A       +  L   +   G+  + + ++ILI  + K   +      
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +  F+PNVVT+T++I  LC   R+ +A + F+++ + G  P++IT+ +LI+GLC 
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM N          PN +  + I+D LCKEG V +A + F Q+ +  +
Sbjct: 378 IGEWKKVEKLSFEMINRG------IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+YT LI G+C     +E+  LL  MV  G++P+ V+ + ++N  CKNG++D+A  
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M   DV+PNA TYN ++ G    G++   +E ++ +   G +    +YNI++ G C
Sbjct: 492 LYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLC 551

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N  V+EAL ++  L  K  +  V T+N +  GL ++ +   A  LF  +  + +  D  
Sbjct: 552 ENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAI 611

Query: 369 TYRTFI-----DGLCVRPQVRFTYARRKGNSGNT 397
            Y   I     +GL       F    + G + N+
Sbjct: 612 IYGLMIQSHIEEGLLEESDELFLSMEKNGCTANS 645



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 192/371 (51%), Gaps = 6/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+   AKN+  D  ++ F  +   G  P++ TY+ +I+  CK G+V      F +++
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               +P+++TFTSLI GLC      +   L  ++   G  PN I  NT+++ LC+ G  +
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVL 417

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A + F ++      I V  KP+ V+Y+I+IDG C +G +D++ +L  +M    L P+ V
Sbjct: 418 EAHDFFDQI------IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNV 471

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY++L++G+C     ++A  L  EM  + V+PN ++ N+I++ L   G++  A      +
Sbjct: 472 TYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKI 531

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V   ++    TYN ++ G C    ++    +F  + S   + +  ++NI+I G  K   +
Sbjct: 532 VDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRI 591

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A SL++ +   G+ P  + Y  +     E    E + +LF+ M+ N   A++ T    
Sbjct: 592 GDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAI 651

Query: 374 IDGLCVRPQVR 384
           +  L  +  VR
Sbjct: 652 VRKLLEKGDVR 662



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 201/473 (42%), Gaps = 112/473 (23%)

Query: 11  VSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIG---LFPDLYTYSILINCFCKMG 60
           V +FN +L  +A      +        +SLF  +  +G   L  D  T+ ILI CFC +G
Sbjct: 49  VHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVG 108

Query: 61  QVSLGFVIFGRILRSCF----------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            +        R  R+             PNV+++  +I GL  E  + +A  LF ++   
Sbjct: 109 LLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQ 168

Query: 111 GCEPNVITYNTLINGLCRT----------------GHTIVALNLFKEMTNGNGEIGVVFK 154
           G  PN++TYN++I+GLC+                 G    A+ L K+M+ G        +
Sbjct: 169 GFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGG------LQ 222

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ VTYS++ID  CK G   +A+ +F  M     NP+  TY +L+HG+       +   L
Sbjct: 223 PDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDL 282

Query: 215 L-----------------------------------IEMVDQGVQPNVVSSNVIMNELCK 239
           L                                   IEM  +G  PNVV+   +++ LCK
Sbjct: 283 LALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCK 342

Query: 240 NGKMDNA-----------------------------------SRLLDLMVQCDVRPNAFT 264
            G++++A                                    +L   M+   + PNA  
Sbjct: 343 AGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIF 402

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            NT+MD  C  G++    + F  +  +G K D  SY ILI+GYC + +++E++ L   + 
Sbjct: 403 LNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMV 462

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             G++P  VTY+ L +G  +  + + AL L+ EM   DV  +  TY   + GL
Sbjct: 463 SIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGL 515



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 64/345 (18%)

Query: 100 AAALFTKLKAFGCEP---NVITYNTLINGLCRTGHTIVALNLFKEMTNGN-------GEI 149
           A +LF  +   G      +  T+  LI   C  G    AL   +E + G+        + 
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFAL---EEESRGSRAAVHMMADD 131

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G    PN ++Y+++I+GL KEG VDKA  LF +M  +   PN+VTY S+I G C A   +
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191

Query: 210 EAKGLLIEMVDQG----------------VQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +A+ +L +M D+G                +QP+VV+ +++++  CK G+   A  + D M
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V+    P+A+TY TL+ G+   G +  + +L   M   G   +D  +NILI  Y KN+ +
Sbjct: 252 VRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETL 311

Query: 314 EEALSLYNELPFKGIKPTVVTYNT-----------------------------------L 338
           ++A++ + E+  KG  P VVTY T                                   L
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            HGL  I + ++  KL  EM    +  +     T +D LC   +V
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 201/373 (53%), Gaps = 8/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++N+++  L K +       + K + +   + PDL TYS +IN FCK G++     
Sbjct: 39  PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 98

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           I   ++ R   AP+VVT+TS++ GLC + ++  A  +  ++K  G EP+  T++ LI G 
Sbjct: 99  ILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 158

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C       AL L+KE+   +      +KP+ VTY+ +IDG CK G ++KA ++   M+  
Sbjct: 159 CNARKVDEALKLYKEILTSSS-----WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 213

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNVVTY+SL+HG C A D ++A  L   M  +G  PNVV+   +++ LC   K+D A
Sbjct: 214 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 273

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L+D M      P+  +YN L+DG+C  G+I   K+LF  M +  C  D  +Y  L+ G
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333

Query: 307 YCKNKEVEEA-LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           +C    +EEA   L N     GI P VVTY+ +  G    ++   A +   EM   +VA 
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393

Query: 366 DTCTYRTFIDGLC 378
           +  TY + IDGLC
Sbjct: 394 NAVTYSSLIDGLC 406



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 193/353 (54%), Gaps = 8/353 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +F+ L+      +  D  L L+K  L S    PD+ TY+ LI+ FCK G +     
Sbjct: 146 PDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMK 205

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G +      PNVVT++SL+ GLC    + +A  LF ++ + GC PNV+TY TLI+GLC
Sbjct: 206 MLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC 265

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                  A  L  EMT           P+TV+Y+ ++DG C+ G +++AK+LF +M  ++
Sbjct: 266 AAHKVDAARLLMDEMT------ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TYT L+ GFC+A+   EA+ LL  M    G+ P+VV+ ++++    +  +   A
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +  +  M+  +V PNA TY++L+DG C  G+++   E+  +M +   +    ++N +I  
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            C+  +++EA  L   +   G++P +VTY TL  G     + E A +LF  M+
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 182/337 (54%), Gaps = 8/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P + T++I+I+ FCK  Q+      F + +R   APN  T+  ++ GLC      +A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEK-MREFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 104 FTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
             +++      P+++TY+T+ING C+ G    A  + +EM   +G       P+ VTY+ 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDG-----IAPDVVTYTS 118

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQ 221
           ++DGLC++G +D+A E+  +MK + + P+  T+++LI G+C+A   +EA  L  E++   
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
             +P+VV+   +++  CK+G ++ A ++L +M      PN  TY++L+ G C  G +++ 
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            +LF  M S GC  +  +Y  LI+G C   +V+ A  L +E+      P  V+YN L  G
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              + + E A +LF EM       D  TY   + G C
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFC 335



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 176/354 (49%), Gaps = 12/354 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ LL  L K    D  L LF+R+ S G  P++ TY+ LI+  C   +V    ++
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +C  P+ V++ +L+ G C   RI EA  LF ++    C P+ ITY  L+ G C 
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L + M    G       P+ VTYSI++ G  +     +A E   +M   N+
Sbjct: 337 ASRLEEARFLLENMKTAAG-----IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 391

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+SLI G C A   + A  +L  MV++ V+P+V + N ++  LC+ G MD A +
Sbjct: 392 APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 451

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD-------DFSYN 301
           LL  M    + P   TY TL++GF  TG++    ELF  M     K         + +++
Sbjct: 452 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFS 511

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            LI G CK +E+++A+++  EL  +  +P       +  GL    + E A KL 
Sbjct: 512 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 565



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 156/275 (56%), Gaps = 10/275 (3%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C+P V+T+  +I+G C+      AL  F++M            PN  TY+++++GLCK  
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-------FVAPNERTYNVVVNGLCKAR 55

Query: 172 FVDKAKELFLQMKY-ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVS 229
              KA E+  +M+  +++ P++VTY+++I+GFC   + + A  +L EMV + G+ P+VV+
Sbjct: 56  LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS-M 288
              +++ LC++GKMD A  ++  M    V P+ FT++ L+ G+C   K++   +L+   +
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S   K D  +Y  LI+G+CK+  +E+A+ +   +  +   P VVTY++L HGL +    
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           ++AL LF  M       +  TY T I GLC   +V
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 270



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 14/293 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG-F 66
           PP   S+N LL    +    +    LFK + +    PD  TY+ L+  FC   ++    F
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARF 345

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++      +   P+VVT++ ++ G     R VEAA    ++ A    PN +TY++LI+GL
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A+ + K M N   E      P+  T++ +I  LC+ G +D+A +L + M   
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVE------PSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 459

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM----VDQGVQPNVVSS---NVIMNELCK 239
            L P +VTYT+L+ GF        A  L   M           N+V     + ++  LCK
Sbjct: 460 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCK 519

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             ++D A  +++ +   +  P       ++DG    G+     +L  S+  +G
Sbjct: 520 AREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 7/126 (5%)

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILINGYCKNKEVE 314
           + +P   T+  ++DGFC   K N++K+     E M      ++ +YN+++NG CK +   
Sbjct: 2   ECQPTVVTWTIIIDGFC---KANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTS 58

Query: 315 EALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRT 372
           +A  +  E+   K + P +VTY+T+ +G  +  + +RA ++  EM   D +A D  TY +
Sbjct: 59  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 373 FIDGLC 378
            +DGLC
Sbjct: 119 VVDGLC 124



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           M C+    ++ I+I+G+CK  ++++AL+ + ++  + + P   TYN + +GL + R   +
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSK 59

Query: 351 ALKLFVEMQ-GNDVAADTCTYRTFIDGLC 378
           A ++  EM+ G  VA D  TY T I+G C
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFC 88


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 206/381 (54%), Gaps = 20/381 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + SFNIL+ C          LS F +L  +G  PD+ T++ L++  C   ++S    
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 68  IFGRILRS----------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +FG ++ +             P V+TF +LI GLC E R++EAAAL  K+   G   +V+
Sbjct: 198 LFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 257

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TY T++NG+C+ G T  ALNL  +M   +       KP+ V YS IID LCK+G    A+
Sbjct: 258 TYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQ 311

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            LF +M  + + PNV TY  +I GFC    W++A+ LL +M+++ + P+V++ N +++  
Sbjct: 312 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 371

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K GK+  A +L D M+   + P+  TYN+++ GFC   + +  K +F  M S     D 
Sbjct: 372 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDV 427

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            ++N +I+ YC+ K V+E + L  E+  +G+     TYNTL HG  E+     A  LF E
Sbjct: 428 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 487

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M  + V  DT T    + G C
Sbjct: 488 MISHGVCPDTITCNILLYGFC 508



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 191/367 (52%), Gaps = 10/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+ H+     LF  +   G+ P+++TY+ +I+ FC  G+ S    +
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V+TF +LI     E ++ EA  L  ++      P+ +TYN++I G C+
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +          P+ VT++ IID  C+   VD+  +L  ++    L
Sbjct: 409 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 458

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  TY +LIHGFC  ++ N A+ L  EM+  GV P+ ++ N+++   C+N K++ A  
Sbjct: 459 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 518

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +++    +  +   YN ++ G C   K++   +LF S+   G + D  +YN++I+G+C
Sbjct: 519 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 578

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + +A  L++++   G +P   TYNTL  G  +  + +++++L  EM+ N  + D  
Sbjct: 579 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 638

Query: 369 TYRTFID 375
           T +   D
Sbjct: 639 TIKMVAD 645



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 175/338 (51%), Gaps = 12/338 (3%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +I  F +M +  +   ++ ++       N+ +F  LIK  C   ++  + + F KL   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG------EIGVVFKPNTVTYSIIID 165
            +P+V+T+NTL++GLC       AL LF  M           EIG+   P  +T++ +I+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLT--PVVITFNTLIN 229

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLC EG V +A  L  +M  + L+ +VVTY ++++G C   D   A  LL +M +  ++P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +VV  + I++ LCK+G   +A  L   M++  + PN FTYN ++DGFC  G+ +  + L 
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M       D  ++N LI+   K  ++ EA  L +E+  + I P  VTYN++ +G  + 
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            + + A  +F  M   DV     T+ T ID  C   +V
Sbjct: 410 NRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRV 443



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 2/170 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   + NILL    +N+  +  L LF+ +    +  D   Y+I+I+  CK  +V  
Sbjct: 491 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 550

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      P+V T+  +I G C +S I +A  LF K+K  G EP+  TYNTLI 
Sbjct: 551 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 610

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           G  + G    ++ L  EM   NG  G  F    V   +I DG   + F D
Sbjct: 611 GCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA-DLITDGRLDKSFSD 658



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 10/216 (4%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A + F  M         V    +I  F   N  + A  L  +M  + +  N+ S N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++   C   K+  +      + +   +P+  T+NTL+ G CL  +I+    LF  M   G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 293 CKHDDF----------SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
              D            ++N LING C    V EA +L N++  KG+   VVTY T+ +G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++   + AL L  +M+   +  D   Y   ID LC
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 10/151 (6%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    D MV+      A   N ++  F    + +    L+  ME      + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI  +C   ++  +LS + +L   G +P VVT+NTL HGL    +   AL LF  M    
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 363 VAAD----------TCTYRTFIDGLCVRPQV 383
              D            T+ T I+GLC+  +V
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRV 237


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 211/397 (53%), Gaps = 29/397 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++ I++  L K        + F ++   G  P+ +TY++LIN FCK+ +V   +++  
Sbjct: 7   VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S  APNVVT++++I G C ++++  A  LF ++   GC PN++TYNTL++GLCR G
Sbjct: 67  EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126

Query: 131 HTIVALNLFKEMTN------------------GNGEIGVVFK-----------PNTVTYS 161
               A  L  EM                      G+I +  K           P+ V YS
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I GLCK G +D+A +LF +M+  +  P+VVT+T+L+ G C  +   EA+ +L  M D+
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
              PNV++ + +++ LCK G++ +A  +   M+   + PN  TYN+L+ GFC+T  ++  
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             L   M + GC  D  +YN LI+G CK     EA  L+ ++  K   P V+TY+ L  G
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++ + + A  LF +M    V  D  T+ T ++G C
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 403



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 204/372 (54%), Gaps = 7/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +++ L+  L K    D    LF+++      PD+ T++ L++  CK  ++     
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      PNV+T++SLI GLC   ++ +A  +F ++   G EPNV+TYN+LI+G C
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            T     AL L +EMT      G +  P+ +TY+ +IDGLCK G   +A  LF  MK + 
Sbjct: 299 MTNGVDSALLLMEEMT----ATGCL--PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            NP+V+TY+ LI GFC     + A+ L  +M+ Q V P+VV+ + ++   C  G +D+A 
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RLL+ MV  D  P+ +TY +L+DGFC  G++   + +   M   GC+ +  +Y  LI+ +
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAAD 366
           C+  +   A  L  E+   G++P V+TY +L  G       E A K+   ++ ++   AD
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532

Query: 367 TCTYRTFIDGLC 378
              YR  +DGLC
Sbjct: 533 MFAYRVMMDGLC 544



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 201/405 (49%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L +N   D    L   +   GL PD ++Y  L+   CK G++ +   +
Sbjct: 110 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F         P+VV +++LI GLC   R+ EA  LF K++   CEP+V+T+  L++GLC+
Sbjct: 170 FEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 229

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M + N        PN +TYS +IDGLCK G V  A+E+F +M    +
Sbjct: 230 GDRLQEAQQVLETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY SLIHGFC  N  + A  L+ EM   G  P++++ N +++ LCK G+   A+R
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343

Query: 249 -----------------------------------LLDLMVQCDVRPNAFTYNTLMDGFC 273
                                              L D M++  V P+  T++TL++G+C
Sbjct: 344 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 403

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G ++  + L   M +  C  D ++Y  L++G+CK   + EA  +   +  +G +P VV
Sbjct: 404 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY  L        +   A KL  EM GN V  +  TYR+ I G C
Sbjct: 464 TYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFC 508



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           ++ T++I+I+  CK  ++      F ++ +    PN  T+  LI G C   ++  A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++K  G  PNV+TY+T+I+G CR      A  LF++M   NG +     PN VTY+ ++
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NGCM-----PNLVTYNTLL 119

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            GLC+ G +D+A EL  +M+   L P+  +Y +L+ G C     + A  +  +  +    
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+VV+ + ++  LCK G++D A +L + M +    P+  T+  LMDG C   ++   +++
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             +ME   C  +  +Y+ LI+G CK  +V +A  ++  +  +GI+P VVTYN+L HG   
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               + AL L  EM       D  TY T IDGLC
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 188/419 (44%), Gaps = 66/419 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L K         + + +      P++ TYS LI+  CK GQV     +
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++     PNVVT+ SLI G C  + +  A  L  ++ A GC P++ITYNTLI+GLC+
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 334

Query: 129 TGHTIVALNLFKEM-----------------------------TNGNGEIGVVFKPNTVT 159
           TG    A  LF +M                             T  +  +     P+ VT
Sbjct: 335 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 394

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +++G C  G VD A+ L  +M   + +P+V TYTSL+ GFC      EA+ +L  M 
Sbjct: 395 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 454

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL----------- 268
            +G QPNVV+   +++  C+ GK   A +LL+ MV   V+PN  TY +L           
Sbjct: 455 KRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 514

Query: 269 -------------------------MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                                    MDG C TG+++   EL  +++  G       Y  L
Sbjct: 515 EARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVAL 574

Query: 304 INGYCKNKEVEEALSLYNELPF-KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I G C+ KE+ +A+ +  E+   +  +P    Y  +   L    + E A  L  E+ GN
Sbjct: 575 IRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/273 (37%), Positives = 154/273 (56%), Gaps = 6/273 (2%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           CE NVIT+  +I+GLC+      A   F +M       G V  PN  TY+++I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVH 56

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V +A  L  +MK   L PNVVTY+++IHGFC     + A  L  +MV+ G  PN+V+ N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +++ LC+NG MD A  LLD M +  ++P+ F+Y+TLM G C TGKI+   ++F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
            C  D  +Y+ LI G CK   ++EA  L+ ++     +P VVT+  L  GL +  + + A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            ++   M+  +   +  TY + IDGLC   QVR
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           M C+ +  ++ I+I+G CK   + EA + + ++  KG  P   TYN L +G  ++ +  R
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           A  L  EM+ + +A +  TY T I G C + +V   Y
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAY 97


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 25/386 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + SFNIL+ C          LS F +L  +G  PD+ T++ L++  C   ++S    
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 68  IFGRILRSCF---------------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           +FG ++ + F                P V+TF +LI GLC E R++EAAAL  K+   G 
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
             +V+TY T++NG+C+ G T  ALNL  +M   +       KP+ V YS IID LCK+G 
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGH 311

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
              A+ LF +M  + + PNV TY  +I GFC    W++A+ LL +M+++ + P+V++ N 
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K GK+  A +L D M+   + P+  TYN+++ GFC   + +  K +F  M S  
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D  ++N +I+ YC+ K V+E + L  E+  +G+     TYNTL HG  E+     A 
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            LF EM  + V  DT T    + G C
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFC 513



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 193/375 (51%), Gaps = 10/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L          +L  ++   GL  D+ TY  ++N  CKMG       +
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +   P+VV ++++I  LC +    +A  LF+++   G  PNV TYN +I+G C 
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++M      I     P+ +T++ +I    KEG + +A++L  +M +  +
Sbjct: 344 FGRWSDAQRLLRDM------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY S+I+GFC  N +++AK     M D    P+VV+ N I++  C+  ++D   +
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +  +  N  TYNTL+ GFC    +N  ++LF  M S G   D  + NIL+ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N+++EEAL L+  +    I    V YN + HG+ +  + + A  LF  +  + V  D  
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573

Query: 369 TYRTFIDGLCVRPQV 383
           TY   I G C +  +
Sbjct: 574 TYNVMISGFCGKSAI 588



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 193/370 (52%), Gaps = 10/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+ H+     LF  +   G+ P+++TY+ +I+ FC  G+ S    +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V+TF +LI     E ++ EA  L  ++      P+ +TYN++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +          P+ VT++ IID  C+   VD+  +L  ++    L
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  TY +LIHGFC  ++ N A+ L  EM+  GV P+ ++ N+++   C+N K++ A  
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +++    +  +   YN ++ G C   K++   +LF S+   G + D  +YN++I+G+C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + +A  L++++   G +P   TYNTL  G  +  + +++++L  EM+ N  + D  
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643

Query: 369 TYRTFIDGLC 378
           T +   + +C
Sbjct: 644 TIKMAEEIIC 653



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 13/341 (3%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +I  F +M +  +   ++ ++       N+ +F  LIK  C   ++  + + F KL   G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFKPNTVTYSI 162
            +P+V+T+NTL++GLC       AL LF  M            +  + +   P  +T++ 
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+GLC EG V +A  L  +M  + L+ +VVTY ++++G C   D   A  LL +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++P+VV  + I++ LCK+G   +A  L   M++  + PN FTYN ++DGFC  G+ +  +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M       D  ++N LI+   K  ++ EA  L +E+  + I P  VTYN++ +G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +  + + A  +F  M   DV     T+ T ID  C   +V
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRV 448



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 155/327 (47%), Gaps = 11/327 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K         L   +    +FPD  TY+ +I  FCK  +      +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+VVTF ++I   C   R+ E   L  ++   G   N  TYNTLI+G C 
Sbjct: 424 FDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A +LF+EM +     GV   P+T+T +I++ G C+   +++A ELF  ++   +
Sbjct: 480 VDNLNAAQDLFQEMISH----GVC--PDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + + V Y  +IHG C  +  +EA  L   +   GV+P+V + NV+++  C    + +A+ 
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M      P+  TYNTL+ G    G+I++  EL   M S G   D F+  +     C
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTY 335
           +  + EE +  Y      G   ++  Y
Sbjct: 654 RVSD-EEIIENYLRPKINGETSSIPRY 679



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   + NILL    +N+  +  L LF+ +    +  D   Y+I+I+  CK  +V  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      P+V T+  +I G C +S I +A  LF K+K  G EP+  TYNTLI 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           G  + G    ++ L  EM   NG  G  F
Sbjct: 616 GCLKAGEIDKSIELISEM-RSNGFSGDAF 643



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 15/221 (6%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A + F  M         V    +I  F   N  + A  L  +M  + +  N+ S N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN------------- 279
           ++   C   K+  +      + +   +P+  T+NTL+ G CL  +I+             
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 280 --RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                 LF  M  +G      ++N LING C    V EA +L N++  KG+   VVTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +G+ ++   + AL L  +M+   +  D   Y   ID LC
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    D MV+      A   N ++  F    + +    L+  ME      + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL-FEIRQAE------------ 349
           LI  +C   ++  +LS + +L   G +P VVT+NTL HGL  E R +E            
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 350 --RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              A+ LF +M    +     T+ T I+GLC+  +V
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/380 (34%), Positives = 200/380 (52%), Gaps = 8/380 (2%)

Query: 1   MRHM--HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++HM      P + ++N L+        +  V+   + + + GL PD+ TYS+L++  CK
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+ +    IF  ++R    PNV  +  L+ G  A   I +   L   + A G  PN   
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N ++    +      A+++F  M+           P+ VTY I+ID LCK G VD A  
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHG------LSPDVVTYGILIDALCKLGRVDDAVL 500

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
            F QM  + + PN V + SL++G C  + W +A+ L  EM DQGV+PNVV  N IM  LC
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G++  A RL+D M +  VRPN  +YNTL+ G CL G+ +   +L   M S+G K D  
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ L+ GYCK   ++ A  L+ E+  KG+ P  VTY+T+  GLF  R+   A +L++ M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             +    D  TY   ++GLC
Sbjct: 681 IKSGQQWDIYTYNIILNGLC 700



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 207/387 (53%), Gaps = 12/387 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDT---VLSLFKRLN---SIGLFPDLYTYSILINCFCK 58
           H  P  V +FN LL  +A+ +   T    +SLF R+    S  + PDL TYSIL  CFC+
Sbjct: 43  HARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCR 102

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVI 117
           +G++  GF  FG IL++ +  N V    L+ GLC   R+ EA   L  ++  FGC PNV+
Sbjct: 103 LGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVV 162

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + NTL+ GLC       AL L   M  +G G       PN VTY+ IIDGLCK   VD+A
Sbjct: 163 SCNTLLKGLCNEKRVEEALELLHTMAEDGGGNC----TPNVVTYNTIIDGLCKAQAVDRA 218

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +   M  + +  +VVTY+++I G C A   + A+G+L  M+D+GV+P+VV+ N I++ 
Sbjct: 219 EGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 278

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK   +D A  +L  M+   V+P+  TYNT++DG C    ++R   +   M     K D
Sbjct: 279 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPD 338

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YN LI+GY    E +E +    E+  +G+ P VVTY+ L   L +  +   A K+F 
Sbjct: 339 IQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFY 398

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M    +  +   Y   + G   R  +
Sbjct: 399 CMIRKGIKPNVTIYGILLHGYAARGAI 425



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLG 65
           P V S N LL  L   K  +  L L   +   G     P++ TY+ +I+  CK   V   
Sbjct: 159 PNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRA 218

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++      +VVT++++I GLC    +  A  +   +   G +P+V+TYNT+I+G
Sbjct: 219 EGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 278

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+      A  + + M +         KP+ VTY+ IIDGLCK   VD+A  +   M  
Sbjct: 279 LCKAQAVDRAEGVLQHMIDKG------VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +++ P++ TY  LIHG+    +W E    L EM  +G+ P+VV+ +++++ LCKNGK   
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A ++   M++  ++PN   Y  L+ G+   G I  + +L   M + G   +++ +NI++ 
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            Y K   ++EA+ +++ +   G+ P VVTY  L   L ++ + + A+  F +M  + V  
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 366 DTCTYRTFIDGLC 378
           ++  + + + GLC
Sbjct: 513 NSVVFNSLVYGLC 525



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 188/370 (50%), Gaps = 6/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNI+L   AK    D  + +F R++  GL PD+ TY ILI+  CK+G+V    + F +++
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN V F SL+ GLC   R  +A  LF ++   G  PNV+ +NT++  LC  G  +
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           VA  L   M      +GV  +PN ++Y+ +I G C  G  D+A +L   M    L P+++
Sbjct: 567 VAQRLIDSME----RVGV--RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y +L+ G+C     + A  L  EM+ +GV P  V+ + I+  L    +   A  L   M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++   + + +TYN +++G C T  ++   ++F S+ S   + +  ++ I+I+   K    
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++A+ L+  +P  G+ P VVTY  +   + +    +    LF+ M+ +    D+      
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800

Query: 374 IDGLCVRPQV 383
           I  L  R ++
Sbjct: 801 IRSLLGRGEI 810



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D    + + +   G+  D+ TYS +I+  CK   V     +
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVT+ ++I GLC    +  A  +   +   G +P+V+TYNT+I+GLC+
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M + +       KP+  TY+ +I G    G   +      +M    L
Sbjct: 317 AQAVDRADGVLQHMIDKD------VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY+ L+   C      EA+ +   M+ +G++PNV    ++++     G + + + 
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTD 430

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLDLMV   + PN + +N ++  +     I+    +F  M   G   D  +Y ILI+  C
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC 490

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V++A+  +N++   G+ P  V +N+L +GL  + + E+A +LF EM    V  +  
Sbjct: 491 KLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVV 550

Query: 369 TYRTFIDGLCVRPQV 383
            + T +  LC   QV
Sbjct: 551 FFNTIMCNLCNEGQV 565



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 29/346 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FN L+  L     ++    LF  +   G+ P++  ++ ++   C  GQV +   +
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL 571

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    PNV+++ +LI G C   R  EAA L   + + G +P++I+Y+TL+ G C+
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
           TG    A  LF+EM       G V                              + +  T
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+II++GLCK   VD+A ++F  +  ++L PN++T+T +I          +A  L   + 
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIP 751

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ PNVV+  ++M  + + G +D    L   M +    P++   N ++      G+I 
Sbjct: 752 SHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIM 811

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           R       ++ M    +  + ++LI+ + + +    A SL  +  F
Sbjct: 812 RAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEKYLF 857


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 207/399 (51%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D  + +   +   G+ PD  TY+ +++ +C  GQ       
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT++ L+  LC   R +EA  +F  +   G +P + TY TL+ G   
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         PN VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIHG C  N W  A+ L++EM+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  N +  N I++  CK G++  + +L +LMV+  V+PN  TYNTL++G+CL GK++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L   M S+G K +  +Y+ LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 194/386 (50%), Gaps = 36/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + PDL TY ILI C C+ G++ LGF   G +++  F  + + FT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             I   FK                    P+ VTY+ II  LCK   
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + P+ +TY S++HG+C +    EA G L +M   GV+P+VV+ ++
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY  +   L +  + E A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
             F +M    ++     Y + I GLC
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLC 452



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ PD Y +SILI  + K G+V    ++
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PN VT+ ++I  LC   R+ +A   F ++   G  P  I YN+LI+GLC 
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 454 CNKWERAEELILEMLDR----GICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY +LI+G+C A   +EA  LL  MV  G++PN V+ + ++N  CK  +M++A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK  ++AL ++  L    +K    T+N +   L ++ + + A  LFV    N +  +  
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687

Query: 369 TYR 371
           TYR
Sbjct: 688 TYR 690



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 204/456 (44%), Gaps = 82/456 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S+NILL  L         L L   +      G  PD+ +Y+ +IN F K G     
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +  +  +L     P+VVT+ S+I  LC    + +A  +   +   G  P+ +TYN++++G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C +G    A+   K+M +   E      P+ VTYS+++D LCK G   +A+++F  M  
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVE------PDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-------------------------- 219
             L P + TY +L+ G+       E  GLL  MV                          
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389

Query: 220 ---------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                     QG+ PN V+   ++  LCK+G++++A    + M+   + P    YN+L+ 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 271 GFCLTGKINRVKELFVSM--------------------------ES---------MGCKH 295
           G C   K  R +EL + M                          ES         +G K 
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  +YN LINGYC   +++EA+ L + +   G+KP  VTY+TL +G  +I + E AL LF
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
            EM+ + V+ D  TY   + GL    Q R T A ++
Sbjct: 570 KEMESSGVSPDIITYNIILQGLF---QTRRTAAAKE 602



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 180/402 (44%), Gaps = 41/402 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+IL+   AK    D  + +F ++   GL P+  TY  +I   CK G+V    + 
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
           F +++    +P  + + SLI GLC                                    
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R++E+  LF  +   G +PNVITYNTLING C  G    A+ L       +G + V  
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL------SGMVSVGL 542

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KPNTVTYS +I+G CK   ++ A  LF +M+   ++P+++TY  ++ G         AK 
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L + + + G Q  + + N+I++ LCKN   D+A ++   +   D++  A T+N ++D   
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+ +  K+LFV+  S G   + ++Y ++         +EE   L+  +   G      
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             N +   L +  +  RA      +     + +  T   FID
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 209/399 (52%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         P+TVT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIH  C  + W++AK L++EM+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  + +  N I++  CK G++  + +L DLMV+  V+P+  TY+TL+DG+CL GK++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L  SM S+G K D  +YN LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY ILI   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTYS II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SILI  + K G+V    ++
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++      P  I YN+LI+ LC 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    +T+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 457 FDKWDKAKELILEMLDR----GICL--DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++P+ V+ N ++N  CK  +M++A  
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 691 TYSLMAENL 699



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M      I     P  + Y+ +I  LC     DKAKE
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM------IDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L L+M    +  + + + S+I   C      E++ L   MV  GV+P++++ + +++  C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             GKMD A++LL  MV   ++P+  TYNTL++G+C   ++     LF  MES G   D  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++ G  + +    A  LY  +   G +  + TYN + HGL +    + AL++F  +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
              D+  +T T+   I  L
Sbjct: 646 CLTDLQLETRTFNIMIGAL 664


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 206/377 (54%), Gaps = 7/377 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+   A+ K  +  + L + +   G  P+L TY++L++  CK+  V     +
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++   FAPNV+TF SL+ G C    + +A  L   + A G  PNV+TY+ LI+GLC+
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +   + A  + +EM       GV   P+  TYS +I GLCK   +++A+++  +M     
Sbjct: 175 SQKFLEAKEVLEEMKAS----GVT--PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y+S+IH FC +    EA+  L EM  Q   P+VV+ N +++ LCK GK+  A  
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 288

Query: 249 LLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LD M +  DV P+  TY+T+++G C +  +   ++L   M   GC  D  +Y  +I+G 
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   +EEA  L   +   G  P VVTY TL  GL + R+ + A ++  EM+      + 
Sbjct: 349 CKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 408

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY T ++GLCV  +++
Sbjct: 409 VTYNTMVNGLCVSGRIK 425



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 204/373 (54%), Gaps = 9/373 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N+L+  L K         + K++   G  P++ T++ L++ FCK G V     
Sbjct: 89  PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 148

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G ++     PNVVT+++LI GLC   + +EA  +  ++KA G  P+  TY+ LI+GLC
Sbjct: 149 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLC 208

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  + + M  G+G       P+ V YS II   CK G + +A++   +M+ + 
Sbjct: 209 KADKIEEAEQMLRRMA-GSG-----CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNA 246
            +P+VVTY ++I G C      EA+ +L +M + G V P+VV+ + ++N LCK+  +  A
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +LLD M +    P+  TY T++DG C  G++   + L   M+  GC  +  +Y  LI+G
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN--DVA 364
            CK ++V+EA  +  E+   G  P +VTYNT+ +GL    + + A +L   M+    + +
Sbjct: 383 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 442

Query: 365 ADTCTYRTFIDGL 377
            D  TYRT ++ L
Sbjct: 443 PDAATYRTIVNAL 455



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 179/343 (52%), Gaps = 7/343 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L S+G  P++ TY+ LI  F +  ++     +   +      PN+VT+  L+  LC  S 
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           +  A  +  K+   G  PNV+T+N+L++G C+ G+   A  L   M      +    +PN
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM------VAKGMRPN 161

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTYS +IDGLCK     +AKE+  +MK   + P+  TY++LIHG C A+   EA+ +L 
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M   G  P+VV  + I++  CK+GK+  A + L  M +    P+  TYNT++DG C  G
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 277 KINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           KI   + +   M+  G    D  +Y+ +ING CK+  + EA  L + +   G  P VVTY
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            T+  GL +  + E A  L   M+    A +  TY T I GLC
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 173/317 (54%), Gaps = 7/317 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K++ +     + + + + G+ PD +TYS LI+  CK  ++     +
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  S   P+VV ++S+I   C   +++EA     +++     P+V+TYNT+I+GLC+
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M     E G V  P+ VTYS +I+GLCK   + +A++L  +M     
Sbjct: 280 LGKIAEAQVILDQMQ----ESGDVL-PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 334

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+VVTYT++I G C      EA+ LL  M   G  PNVV+   +++ LCK  K+D A R
Sbjct: 335 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 394

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES--MGCKHDDFSYNILING 306
           +++ M      PN  TYNT+++G C++G+I   ++L   M+     C  D  +Y  ++N 
Sbjct: 395 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 454

Query: 307 YCKNKEVEEALSLYNEL 323
              +  V+EA  L  ++
Sbjct: 455 LMSSDLVQEAEQLLEQM 471



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 173/323 (53%), Gaps = 10/323 (3%)

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           C  G +     +   +  + FAP+  T T +I  + A +  ++ A     L++ GC+PNV
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNV 57

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           +TY  LI    R      A+ L +EM     E G    PN VTY++++D LCK   V  A
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMR----ERGC--PPNLVTYNVLVDALCKLSMVGAA 111

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +++  +M      PNV+T+ SL+ GFC   + ++A+ LL  MV +G++PNVV+ + +++ 
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK+ K   A  +L+ M    V P+AFTY+ L+ G C   KI   +++   M   GC  D
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              Y+ +I+ +CK+ ++ EA     E+  +   P VVTYNT+  GL ++ +   A  +  
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 357 EMQ-GNDVAADTCTYRTFIDGLC 378
           +MQ   DV  D  TY T I+GLC
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLC 314



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    SP  V+   ++ G     K  +  + L +   S  + PD+ TYS +IN  CK  
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +  R+ ++   P+VVT+T++I GLC   R+ EA  L   +K  GC PNV+TY 
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+GLC+      A  + +EM N          PN VTY+ +++GLC  G + +A++L 
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAG------CPPNLVTYNTMVNGLCVSGRIKEAQQLV 431

Query: 181 LQMK--YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            +MK      +P+  TY ++++    ++   EA+ LL +M
Sbjct: 432 QRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 3/146 (2%)

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C  G +  A  LL+ M      P+AFT+  ++      G ++   +    + SMGC  + 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNV 57

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI  + + K++EEA+ L  E+  +G  P +VTYN L   L ++     A  +  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQV 383
           M     A +  T+ + +DG C R  V
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNV 143


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 207/399 (51%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D  + +   +   G+ PD  TY+ +++ +C  GQ       
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT++ L+  LC   R +EA  +F  +   G +P + TY TL+ G   
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         PN VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIHG C  N W  A+ L++EM+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  N +  N I++  CK G++  + +L +LMV+  V+PN  TYNTL++G+CL GK++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L   M S+G K +  +Y+ LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 36/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + PDL TY ILI C C+ G++ LGF   G +++  F  + + FT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
             G             I   FK                    P+ VTY+ II  LCK   
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + P+ +TY S++HG+C +    EA G L +M   GV+P+VV+ ++
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D + ++ILI  Y    +V++A+ +++++  +G+ P  VTY  +   L +  + E A+
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
             F +M    ++     Y + I GLC
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLC 452



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 189/363 (52%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ PD Y +SILI  +   G+V    ++
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    PN VT+ ++I  LC   R+ +A   F ++   G  P  I YN+LI+GLC 
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 454 CNKWERAEELILEMLDR----GICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+TY +LI+G+C A   +EA  LL  MV  G++PN V+ + ++N  CK  +M++A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK  ++AL ++  L    +K    T+N +   L ++ + + A  LFV    N +  +  
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687

Query: 369 TYR 371
           TYR
Sbjct: 688 TYR 690



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 204/456 (44%), Gaps = 82/456 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S+NILL  L         L L   +      G  PD+ +Y+ +IN F K G     
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +  +  +L     P+VVT+ S+I  LC    + +A  +   +   G  P+ +TYN++++G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C +G    A+   K+M +   E      P+ VTYS+++D LCK G   +A+++F  M  
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVE------PDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-------------------------- 219
             L P + TY +L+ G+       E  GLL  MV                          
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQ 389

Query: 220 ---------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                     QG+ PN V+   ++  LCK+G++++A    + M+   + P    YN+L+ 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 271 GFCLTGKINRVKELFVSM--------------------------ES---------MGCKH 295
           G C   K  R +EL + M                          ES         +G K 
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  +YN LINGYC   +++EA+ L + +   G+KP  VTY+TL +G  +I + E AL LF
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
            EM+ + V+ D  TY   + GL    Q R T A ++
Sbjct: 570 KEMESSGVSPDIITYNIILQGLF---QTRRTAAAKE 602



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 179/402 (44%), Gaps = 41/402 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+IL+   A     D  + +F ++   GL P+  TY  +I   CK G+V    + 
Sbjct: 369 PDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
           F +++    +P  + + SLI GLC                                    
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R++E+  LF  +   G +PNVITYNTLING C  G    A+ L       +G + V  
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL------SGMVSVGL 542

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KPNTVTYS +I+G CK   ++ A  LF +M+   ++P+++TY  ++ G         AK 
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L + + + G Q  + + N+I++ LCKN   D+A ++   +   D++  A T+N ++D   
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+ +  K+LFV+  S G   + ++Y ++         +EE   L+  +   G      
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             N +   L +  +  RA      +     + +  T   FID
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 209/399 (52%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         P+TVT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIH  C  + W++AK L++EM+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  + +  N I++  CK G++  + +L DLMV+  V+P+  TY+TL+DG+CL GK++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L  SM S+G K D  +YN LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY ILI   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTYS II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SILI  + K G+V    ++
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++      P  I YN+LI+ LC 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    +T+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 457 FDKWDKAKELILEMLDR----GICL--DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++P+ V+ N ++N  CK  +M++A  
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 691 TYSLMAENL 699



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M      I     P  + Y+ +I  LC     DKAKE
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM------IDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L L+M    +  + + + S+I   C      E++ L   MV  GV+P++++ + +++  C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             GKMD A++LL  MV   ++P+  TYNTL++G+C   ++     LF  MES G   D  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++ G  + +    A  LY  +   G +  + TYN + HGL +    + AL++F  +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
              D+  +T T+   I  L
Sbjct: 646 CLTDLQLETRTFNIMIGAL 664


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/418 (33%), Positives = 213/418 (50%), Gaps = 33/418 (7%)

Query: 2   RHMHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R M  + PP S ++N ++  L+K+   D  + L + +   G  P++++Y+ +++ FCK  
Sbjct: 34  REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 93

Query: 61  QVSLGFVIFGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           +V     +  + ++R C  P+VV++T++I GLC   ++ EA  +  K+   GC+PNVITY
Sbjct: 94  RVENALWLLEQMVMRGC-PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 152

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV---------------------FK---- 154
            TL++G CR G    A+ L ++MT        +                     FK    
Sbjct: 153 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEE 212

Query: 155 -----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                P+  TYS I+D L K G VD A  L   M  +  +PNVVTY+SL+HG C A   +
Sbjct: 213 SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLD 272

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL  M   G  PN+V+ N I++  CK G++D A  LL+ MV    +PN  TY  L+
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 332

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           D FC  GK      L   M   G   + F+YN L++ +CK  EVE A  L + +  KG  
Sbjct: 333 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 392

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           P VV+YNT+  GL +  +    + L  +M  N+   D  T+ T ID +C   +V   Y
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 213/421 (50%), Gaps = 43/421 (10%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M   PP V S+  ++  L K    D    +  ++   G  P++ TY  L++ FC++G + 
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTL 122
               +  ++    + PN +T+ +++ GLC+  ++  A  LF +++  G C P+V TY+T+
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++ L ++G    A  L + M +          PN VTYS ++ GLCK G +D+A  L  +
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKG------CSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M     +PN+VTY ++I G C     +EA  LL EMVD G QPNVV+  V+++  CK GK
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            ++A  L+++MV+    PN FTYN+L+D FC   ++ R  +L  SM   GC  +  SYN 
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 303 LINGYCKNKEVEE-----------------------------------ALSLYNELPFKG 327
           +I G CK  +V E                                   A  L+N +   G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLCVRPQVRFT 386
             P +VTYN+L HGL + R+ ++A  L  EM +    + D  TY T IDGLC   +V   
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 387 Y 387
           Y
Sbjct: 521 Y 521



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 201/370 (54%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL    K    +  + L + +   G  P+L+TY+ L++ FCK  +V     +
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNVV++ ++I GLC  +++ E   L  ++ +  C P+++T+NT+I+ +C+
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           T    +A  LF    N   E G    PN VTY+ ++ GLCK    D+A+ L  +M + + 
Sbjct: 443 TYRVDIAYELF----NLIQESGCT--PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 496

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+++TY ++I G C +   + A  L ++M+  G+ P+ V+ +++++ LCK   MD A+
Sbjct: 497 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 556

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+LM++    P A TY TL+DGFC TG +++  E+   + S G   D  +++I I+  
Sbjct: 557 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 616

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   + +A  L   +   G+ P  VTYNTL  G  +  + E A+ LF  M+      D 
Sbjct: 617 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDN 676

Query: 368 CTYRTFIDGL 377
            TY T +  L
Sbjct: 677 ATYTTLVGHL 686



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 214/442 (48%), Gaps = 66/442 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQVSLGFV 67
           P   ++N ++  L   +  D+ L LFK +   G  P D++TYS +++   K G+V     
Sbjct: 182 PNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++    +PNVVT++SL+ GLC   ++ EA AL  ++   GC PN++TYNT+I+G C
Sbjct: 242 LVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 301

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTV 158
           + G    A +L +EM +G  +  VV                             + PN  
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+ ++D  CK+  V++A +L   M  +   PNVV+Y ++I G C A   +E   LL +M
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-----------------CDVR-- 259
           +     P++V+ N I++ +CK  ++D A  L +L+ +                 C  R  
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 481

Query: 260 -----------------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
                            P+  TYNT++DG C + +++R  +LF+ M S G   DD +Y+I
Sbjct: 482 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 541

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+  CK + ++EA ++   +   G  P  +TY TL  G  +    ++AL++   +    
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 601

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
              D  T+  FID L  R ++R
Sbjct: 602 SYPDVVTFSIFIDWLSKRGRLR 623



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 208/449 (46%), Gaps = 77/449 (17%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M      PP V +++ ++  L K+   D    L + + S G  P++ TYS L++  CK G
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +  R+ RS  +PN+VT+ ++I G C   RI EA  L  ++   GC+PNV+TY 
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L++  C+ G    A+ L + M     E G V  PN  TY+ ++D  CK+  V++A +L 
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKDEVERACQLL 383

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  +   PNVV+Y ++I G C A   +E   LL +M+     P++V+ N I++ +CK 
Sbjct: 384 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKT 443

Query: 241 GKMDNASRLLDLMVQ-----------------CDVR-------------------PNAFT 264
            ++D A  L +L+ +                 C  R                   P+  T
Sbjct: 444 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 503

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI---------------------- 302
           YNT++DG C + +++R  +LF+ M S G   DD +Y+I                      
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 303 -------------LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
                        LI+G+CK   +++AL +   L  KG  P VVT++     L +  +  
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +A +L   M    +  DT TY T + G C
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFC 652



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 179/343 (52%), Gaps = 8/343 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +N  GL      +  ++   C  GQ S   + F  + ++C  P+ VT+ ++I GL    R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDR 59

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A  L  ++   G  PNV +YNT+++G C+      AL L ++M            P+
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG------CPPD 113

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V+Y+ +I+GLCK   VD+A  +  +M      PNV+TY +L+ GFC   D + A  L+ 
Sbjct: 114 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 173

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYNTLMDGFCLT 275
           +M ++G +PN ++ N IM+ LC   K+D+A +L   M +     P+ FTY+T++D    +
Sbjct: 174 KMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKS 233

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK++    L  +M S GC  +  +Y+ L++G CK  +++EA +L   +   G  P +VTY
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           NT+  G  ++ + + A  L  EM       +  TY   +D  C
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 169/311 (54%), Gaps = 7/311 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L K       + L +++ S    PD+ T++ +I+  CK  +V + + +
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 452

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
           F  I  S   PN+VT+ SL+ GLC   R  +A  L  ++ +  GC P++ITYNT+I+GLC
Sbjct: 453 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 512

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++     A  LF +M +          P+ VTYSI+I  LCK  F+D+A  +   M    
Sbjct: 513 KSKRVDRAYKLFLQMLSDG------LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P  +TY +LI GFC   + ++A  +L  ++ +G  P+VV+ ++ ++ L K G++  A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M++  + P+  TYNTL+ GFC   +     +LF  M   GC+ D+ +Y  L+   
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686

Query: 308 CKNKEVEEALS 318
              K  ++ L+
Sbjct: 687 VDKKSYKDLLA 697



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 1/126 (0%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++ +A  + +++ G C  G+ +     F  M S  C  D  +YN +ING  K+  +++A+
Sbjct: 6   LKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAI 64

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L  E+   G  P V +YNT+ HG  +  + E AL L  +M       D  +Y T I+GL
Sbjct: 65  RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGL 124

Query: 378 CVRPQV 383
           C   QV
Sbjct: 125 CKLDQV 130



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V +F+I +  L+K         L + +   GL PD  TY+ L+  FC   +     
Sbjct: 602 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAV 661

Query: 67  VIFGRILRSC-FAPNVVTFTSLIKGL 91
            +F  ++R C   P+  T+T+L+  L
Sbjct: 662 DLF-EVMRQCGCEPDNATYTTLVGHL 686


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 201/369 (54%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN+L G +AK KHY T +SL K ++ IG+ P++ T++I+INC C++     GF +
Sbjct: 76  PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSV 135

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + +    P++VTFT+++ GLC E  + +A      LK  G E +  T   +INGLC+
Sbjct: 136 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 195

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH+  AL+  K+M   N  + V        Y+ ++DGLCK+G V +A +LF QM  + +
Sbjct: 196 VGHSSAALSYLKKMEEQNCNLDV------TAYNAVVDGLCKDGMVFEAWDLFSQMTGKGI 249

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY  LIHG C+ + W EA  LL  M+ +G+ P+V + NVI     K G +  A  
Sbjct: 250 QPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKS 309

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M    +  +  TY++++   C+  ++    E+F  M   GC  +  +Y  LI+G+C
Sbjct: 310 IFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWC 369

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + K + +A+    E+   G+ P +VT+NTL  G  +  +   A +LF  M  +    D  
Sbjct: 370 EIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQ 429

Query: 369 TYRTFIDGL 377
           T    +DGL
Sbjct: 430 TCAIILDGL 438



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 183/363 (50%), Gaps = 6/363 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K  H    LS  K++       D+  Y+ +++  CK G V   + +F ++      P+
Sbjct: 193 LCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPD 252

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           + T+  LI GLC   R  EAA L   +   G  P+V T+N +     +TG    A ++F 
Sbjct: 253 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFS 312

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            M    G +G+  + + VTYS II   C    +  A E+F  M  +   PN+VTYTSLIH
Sbjct: 313 FM----GHMGI--EHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIH 366

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+C   + N+A   L EMV+ G+ PN+V+ N ++   CK GK   A  L  +M +    P
Sbjct: 367 GWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLP 426

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  T   ++DG       +    LF  +E M    D   Y+I++NG C + ++ +AL L+
Sbjct: 427 DLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELF 486

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           + L  KG+K  VVTYN + +GL +    + A  L ++M+ N    D CTY  F+ GL  R
Sbjct: 487 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRR 546

Query: 381 PQV 383
            ++
Sbjct: 547 YEI 549



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 171/349 (48%), Gaps = 7/349 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L     +     L   +   G+ PD+ T++++   F K G +S    I
Sbjct: 251 PDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSI 310

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       +VVT++S+I   C  +++ +A  +F  +   GC PN++TY +LI+G C 
Sbjct: 311 FSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCE 370

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A+    EM N NG       PN VT++ +I G CK G    AKELF  M     
Sbjct: 371 IKNMNKAMYFLGEMVN-NG-----LDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQ 424

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T   ++ G    +  +EA  L  E+       +++  ++I+N +C +GK+++A  
Sbjct: 425 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALE 484

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    V+ +  TYN +++G C  G ++  ++L + ME  GC  D+ +YN+ + G  
Sbjct: 485 LFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 544

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           +  E+ ++      +  KG +    T   L +  F   +  RA ++F++
Sbjct: 545 RRYEISKSTKYLMFMKGKGFRANATTTKLLIN-YFSANKENRAFQVFLQ 592



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 11/284 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P V  +N L   + +  H   A++L K M+     IGV  KPN  T++I+I+ LC+    
Sbjct: 76  PCVKDFNLLFGIVAKMKHYTTAISLIKHMS----YIGV--KPNVPTHNIVINCLCRLNHT 129

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                +   M    + P++VT+T++++G C   +  +A   +  + D G + +  +   I
Sbjct: 130 VFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAI 189

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N LCK G    A   L  M + +   +   YN ++DG C  G +    +LF  M   G 
Sbjct: 190 INGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGI 249

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D F+YN LI+G C     +EA  L   +  KGI P V T+N +     +     RA  
Sbjct: 250 QPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKS 309

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
           +F  M    +  D  TY + I   C+  Q++     F    RKG
Sbjct: 310 IFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKG 353



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H   P + +  I+L  L K   +   +SLF+ L  +    D+  YSI++N  C  G++
Sbjct: 420 HKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKL 479

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       +VVT+  +I GLC E  + +A  L  K++  GC P+  TYN  
Sbjct: 480 NDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVF 539

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC--KEGFVDKAKELF 180
           + GL R  + I     +     G G     F+ N  T  ++I+     KE   ++A ++F
Sbjct: 540 VQGLLRR-YEISKSTKYLMFMKGKG-----FRANATTTKLLINYFSANKE---NRAFQVF 590

Query: 181 LQ 182
           LQ
Sbjct: 591 LQ 592


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  240 bits (612), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 209/399 (52%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         P+TVT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIH  C  + W++AK L++EM+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  + +  N I++  CK G++  + +L DLMV+  V+P+  TY+TL+DG+CL GK++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L  SM S+G K D  +YN LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY IL+   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            ++KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTYS II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SILI  + K G+V    ++
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++      P  I YN+LI+ LC 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    +T+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 457 FDKWDKAKELILEMLDR----GICL--DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++P+ V+ N ++N  CK  +M++A  
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 691 TYSLMAENL 699



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M +          P  + Y+ +I  LC     DKAKE
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L L+M    +  + + + S+I   C      E++ L   MV  GV+P++++ + +++  C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             GKMD A++LL  MV   ++P+  TYNTL++G+C   ++     LF  MES G   D  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++ G  + +    A  LY  +   G +  + TYN + HGL +    + AL++F  +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
              D+  +T T+   I  L
Sbjct: 646 CLTDLQLETRTFNIMIGAL 664



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 42/211 (19%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC---DVRPNAFTY 265
            +A+ +  E++ +G   ++   N  + ++ ++      SR  + M +    +V PN  TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRY-NRMARAGADEVTPNLCTY 94

Query: 266 NTLMDGFCLTGKI--------NRVKELFV----------------------------SME 289
             LM   C  G++        N +K+ F+                             M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQ 347
            +GC  + FSYNIL+ G C +   +EAL L   +P  G    P VV+Y T+ +G F+   
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++A   + EM    +  +  TY + I  LC
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 209/399 (52%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT+ SL+  LC   R  EA  +F  +   G +P + TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
            G  +    L   M  NG                  G++    +VF         P+TVT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK G V+ A   F QM  E L+P  + Y SLIH  C  + W++AK L++EM+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+G+  + +  N I++  CK G++  + +L DLMV+  V+P+  TY+TL+DG+CL GK++
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L  SM S+G K D  +YN LINGYCK   +E+AL L+ E+   G+ P ++TYN + 
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+ R+   A +L+V +  +    +  TY   + GLC
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY ILI   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTYS II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       +  L   +   G+ P+ Y +SILI  + K G+V    ++
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++      P  I YN+LI+ LC 
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    +T+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 457 FDKWDKAKELILEMLDR----GICL--DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++P+ V+ N ++N  CK  +M++A  
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   +EAL ++  L    ++    T+N +   L ++ + + A  LF  +  N +  D  
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 369 TYRTFIDGL 377
           TY    + L
Sbjct: 691 TYSLMAENL 699



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M +          P  + Y+ +I  LC     DKAKE
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L L+M    +  + + + S+I   C      E++ L   MV  GV+P++++ + +++  C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             GKMD A++LL  MV   ++P+  TYNTL++G+C   ++     LF  MES G   D  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++ G  + +    A  LY  +   G +  + TYN + HGL +    + AL++F  +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
              D+  +T T+   I  L
Sbjct: 646 CLTDLQLETRTFNIMIGAL 664


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 208/385 (54%), Gaps = 27/385 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAK--NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M  M+PSP  +  FN +LG L K  N +Y   +SL+ RL    + P + T++ +INC+C 
Sbjct: 37  MLRMNPSPSIIE-FNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCH 95

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           +G++   F +  +IL+  + P+ +T T+LIKGLC   ++ EA      + A G   N ++
Sbjct: 96  LGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVS 155

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y  LINGLC+ G T  AL + +++       G +   N V YS IID LCKE  V +A E
Sbjct: 156 YGILINGLCKMGETRAALQVLRKID------GKLVNTNVVMYSTIIDSLCKEKLVTEAYE 209

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L+ QM  + ++P+VVT+++LI+GFC    + EA GL  EMV   + P+V + N++++ LC
Sbjct: 210 LYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALC 269

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G       +L +M++                     ++N+ K +F  +       D  
Sbjct: 270 KEGSTKETKNVLAVMMK------------------EVNQVNKAKHVFNIIGKRRVTPDVH 311

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY I+I   CK K V+EALSL+NE+  KGI P  VTY++L  GL +  +   A +L  +M
Sbjct: 312 SYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM 371

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
                 AD  TY +F+  LC   QV
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQV 396



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 187/357 (52%), Gaps = 11/357 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L K       L + ++++   +  ++  YS +I+  CK   V+  + ++ ++
Sbjct: 155 SYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQM 214

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    +P+VVTF++LI G C   +  EA  LF ++      P+V T+N L++ LC+ G T
Sbjct: 215 IVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGST 274

Query: 133 IVALN----LFKEMTNGNGEIGVV-------FKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
               N    + KE+   N    V          P+  +Y+III  LCK   VD+A  LF 
Sbjct: 275 KETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFN 334

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M+ + + P+ VTY+SLI G C +   + A  LL +M  +G   +V++    ++ LCKN 
Sbjct: 335 EMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNH 394

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           ++D A  L+  +    ++PN  TYN L+DG C  G+    + +F  +   G K   ++YN
Sbjct: 395 QVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           I+ING C     +EA++L  ++   G  P VVTY T+   LF+  +  +A KL  EM
Sbjct: 455 IMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 23/335 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ ++  L K K       L+ ++    + PD+ T+S LI  FC +GQ    F +F 
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 71  RILRSCFAPNVVTFTSLIKGLCAE-----------------SRIVEAAALFTKLKAFGCE 113
            ++ +   P+V TF  L+  LC E                 +++ +A  +F  +      
Sbjct: 248 EMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVT 307

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+V +Y  +I  LC+      AL+LF EM            P+ VTYS +IDGLCK   +
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKG------ITPDKVTYSSLIDGLCKSERI 361

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A EL  QM       +V+TYTS +H  C  +  ++A  L+ ++ DQG+QPN+ + N++
Sbjct: 362 SHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNIL 421

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCK G+ +NA  +   ++    +   +TYN +++G CL G  +    L   ME  GC
Sbjct: 422 IDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGC 481

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             D  +Y  +I    KN E  +A  L  E+  +G+
Sbjct: 482 TPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 37/243 (15%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE--AKGLLIEMVDQGVQPNVVSS 230
           V  A   F +M   N +P+++ +  ++     +N+ N   A  L   +    + P++V+ 
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++N  C  G+MD A  +L  +++    P+  T  TL+ G CL GK++        + +
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 291 MGCKHDDFSYNILING-----------------------------------YCKNKEVEE 315
            G + ++ SY ILING                                    CK K V E
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  LY+++  K + P VVT++ L +G   + Q + A  LF EM   ++  D CT+   +D
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 376 GLC 378
            LC
Sbjct: 267 ALC 269



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++   L  L KN   D  ++L K++   G+ P++ TY+ILI+  CK G+ 
Sbjct: 372 HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
               VIF  +L   +   V T+  +I GLC E    EA  L  K++  GC P+V+TY T+
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L +      A  L +EM
Sbjct: 492 IRALFKNDENHKAEKLLREM 511



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 41/210 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+ I++  L K K  D  LSLF  +   G+ PD  TYS LI+  CK  ++S  + +
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN------------- 115
             ++       +V+T+TS +  LC   ++ +A AL  K+K  G +PN             
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427

Query: 116 ----------------------VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                 V TYN +INGLC  G    A+ L ++M + NG      
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMED-NG-----C 481

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            P+ VTY  II  L K     KA++L  +M
Sbjct: 482 TPDVVTYETIIRALFKNDENHKAEKLLREM 511



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 2/183 (1%)

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK--NGKMDNASRLLDLMVQCDVRPNAFT 264
           D ++A      M+     P+++  N I+  L K  N     A  L   +    + P+  T
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           +NT+++ +C  G+++    +   +  MG   D  +   LI G C N +V EAL  ++ + 
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +G +   V+Y  L +GL ++ +   AL++  ++ G  V  +   Y T ID LC    V 
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205

Query: 385 FTY 387
             Y
Sbjct: 206 EAY 208



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++NIL+  L K   ++    +F+ L   G    ++TY+I+IN  C  G       +
Sbjct: 413 PNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTL 472

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++  +   P+VVT+ ++I+ L       +A  L  ++ A G
Sbjct: 473 LEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+        +  V+ + + +++ GL PD YTY  L+N  CK G+       
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P V T+  LI G   +  + E  +    +   G  P+   +N   +   +
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++F +M            PN V Y  +ID LCK G VD A+  F QM  E +
Sbjct: 387 CGMIDKAMDIFNKMRQHG------LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+V + SL++G C  + W  A+ L+ EM+DQG+ PN V  N ++  LC  G++    R
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR 500

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+DLM    VRP+AF+Y  L+ G+CLTG+ +  +++F  M S+G    + +YN L++GYC
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +++A  L+ E+  KG+ P VVTYNT+ HGLF+ ++   A +L++ M  +    D  
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 620

Query: 369 TYRTFIDGLC 378
           TY   ++GLC
Sbjct: 621 TYNIILNGLC 630



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 192/413 (46%), Gaps = 39/413 (9%)

Query: 5   HPSPPPVSSFNILLGCLAKNK---HYDTVLSLFKRLN---SIGLFPDLYTYSILINCFCK 58
           H  P  V +FN LL  +++ +     +  +S F R+    S  + P+L TYSILI  FC+
Sbjct: 43  HARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCR 102

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVI 117
           MG +  GF  FG IL++ +  + +    L+KGLC   R+ EA   L  ++   GC P+ +
Sbjct: 103 MGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTV 162

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGE----------------------------- 148
           +Y  L+ GLC       AL L   M + +G                              
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLF 222

Query: 149 ---IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
              I     P+ VTY+ +IDGLCK    D+A+ +F QM      PN  TY  LIHG+   
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSI 282

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             W E   +L EM  +G++P+  +   ++N LCKNG+   A    D M++  ++P   TY
Sbjct: 283 GKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTY 342

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
             L+ G+   G ++ +      M   G   D   +NI  + Y K   +++A+ ++N++  
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G+ P VV Y  L   L ++ + + A   F +M    V  +   + + + GLC
Sbjct: 403 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 455



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS++ IL+   A       + S    +   GL PD + ++I  + + K G +     I
Sbjct: 337 PKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 396

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   +PNVV + +LI  LC   R+ +A   F ++   G  PN++ +N+L+ GLC 
Sbjct: 397 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+   PN V ++ +I  LC  G V + + L   M++  +
Sbjct: 457 VDKWERAEELVYEMLDQ----GIC--PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGV 510

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +YT LI G+C     +EA+ +   MV  G+ P  V+ N +++  C   ++D+A  
Sbjct: 511 RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  V P   TYNT++ G   T + +  KEL+++M + G K D ++YNI++NG C
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC 630

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  V+EA  ++  L  KG++  ++T+  +   L +  + E A+ LF  +  N +  +  
Sbjct: 631 KSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVV 690

Query: 369 TYRTFIDGL 377
           TYR   + L
Sbjct: 691 TYRLVAENL 699



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 186/375 (49%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI     AK    D  + +F ++   GL P++  Y  LI+  CK+G+V    V 
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN+V F SL+ GLC   +   A  L  ++   G  PN + +NTLI  LC 
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 491

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +    L   M +    +GV  +P+  +Y+ +I G C  G  D+A+++F  M    L
Sbjct: 492 VGRVMEGRRLIDLMEH----VGV--RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P  VTY +L+HG+C A+  ++A  L  EM+ +GV P VV+ N I++ L +  +   A  
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+    + + +TYN +++G C +  ++   ++F S+ S G + +  ++ I+I    
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +P  G+ P VVTY  +   L E    E    LF  M+ N  A ++ 
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R  +
Sbjct: 726 MLNALVRRLLHRGDI 740



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 187/442 (42%), Gaps = 79/442 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P   S+ ILL  L   K  +  L L   +   +     P++ +YSI+IN F   GQV   
Sbjct: 159 PDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKP 218

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F  ++     P+VVT+T++I GLC       A  +F ++   G +PN  TYN LI+G
Sbjct: 219 YNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHG 278

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G     + + +EM+          KP+  TY  +++ LCK G   +A+  F  M  
Sbjct: 279 YLSIGKWKEVVQMLEEMSARG------LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD------------------------- 220
           + + P V TY  LIHG+      +E    L  MV+                         
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392

Query: 221 ----------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                      G+ PNVV+   +++ LCK G++D+A    + M+   V PN   +N+L+ 
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452

Query: 271 GFCLTGKINRVKELFVS-----------------------------------MESMGCKH 295
           G C   K  R +EL                                      ME +G + 
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D FSY  LI+GYC     +EA  +++ +   G+ PT VTYNTL HG     + + A  LF
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 572

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            EM    V     TY T + GL
Sbjct: 573 REMLRKGVTPGVVTYNTILHGL 594



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 179/371 (48%), Gaps = 12/371 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLS-LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           + N LL  L   K     +  L +R+  +G  PD  +Y+IL+   C   +      +   
Sbjct: 127 AINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHM 186

Query: 72  IL----RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +     R C  PNVV+++ +I G   E ++ +   LF ++   G  P+V+TY T+I+GLC
Sbjct: 187 MADDHGRRC-PPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  +F++M + NG     FKPN  TY+ +I G    G   +  ++  +M    
Sbjct: 246 KAQLFDRAEGVFQQMID-NG-----FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TY SL++  C      EA+     M+ +G++P V +  ++++     G +    
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LDLMV+  + P+   +N     +   G I++  ++F  M   G   +  +Y  LI+  
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V++A   +N++  +G+ P +V +N+L +GL  + + ERA +L  EM    +  + 
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 479

Query: 368 CTYRTFIDGLC 378
             + T I  LC
Sbjct: 480 VFFNTLICNLC 490



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 6/293 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L   +  +G+ PD ++Y+ LI+ +C  G+      +F  ++    +P  VT+ +L+ G C
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           + SRI +A  LF ++   G  P V+TYNT+++GL +T     A  L+  M N        
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT----- 615

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            K +  TY+II++GLCK   VD+A ++F  +  + L  N++T+T +I          +A 
Sbjct: 616 -KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   +   G+ PNVV+  ++   L + G ++    L   M +    PN+   N L+   
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
              G I+R       ++      +  + ++L++ +  ++    A SL  +  F
Sbjct: 735 LHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEKYHF 787



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN L+  L     ++    L   +   G+ P+   ++ LI   C +G+V  G  +
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++T LI G C   R  EA  +F  + + G  P  +TYNTL++G C 
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF+EM       GV   P  VTY+ I+ GL +     +AKEL+L M     
Sbjct: 562 ASRIDDAYCLFREMLRK----GVT--PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++ TY  +++G C +N  +EA  +   +  +G+Q N+++  +++  L K G+ ++A  
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    + PN  TY  + +     G +     LF +ME  G   +    N L+    
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735

Query: 309 KNKEVEEALSLYNEL 323
              ++  A +  ++L
Sbjct: 736 HRGDISRAGAYLSKL 750


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 202/370 (54%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++++L+  L K       + L + + + G  PD+ TY+IL++  CK  +V+  + +
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 170

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L +   PN+VT+ SL+ GLC   R+ +A AL   +   GC PNV+TY TLI+GLC+
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M +  G       P+ + Y+++I+GLCK   VD++  L  +     +
Sbjct: 231 VGRVKDACAMLADMIDKGG------TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+S+I+G C +N  +EA  LL+ +  +G  P+V+  + +++ LCK GK+D A  
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L ++M       +  TY+TL+DG C  G+++    L   M  MG      +YN LI G C
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER-ALKLFVEMQGNDVAADT 367
               ++EA+ L  E+      P+ VTYN L HG+  + + +  AL  F EM  N V  D 
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464

Query: 368 CTYRTFIDGL 377
            TY   ++GL
Sbjct: 465 ITYSILLEGL 474



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 206/373 (55%), Gaps = 7/373 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SFNIL+  L +    +T L  F++++     P++ TYS+LI+  CK  +VS    +  
Sbjct: 79  VISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCKANRVSQAVELLE 137

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +     +P+V+T+T L+ GLC ES++  A  +  ++   GC PN++TYN+L++GLCR  
Sbjct: 138 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 197

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L ++MT           PN VTY  +IDGLCK G V  A  +   M  +   P
Sbjct: 198 RVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 251

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++ Y  LI+G C A+  +E+  LL   V  G++P+VV+ + ++  LC++ ++D A RLL
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             +      P+   Y+TL+DG C  GK++   +L+  M   GC  D  +Y+ LI+G CK 
Sbjct: 312 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             V+EA  L   +   G  P+ +TYN+L  GL ++   + A++L  EM+ ++ A    TY
Sbjct: 372 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 431

Query: 371 RTFIDGLCVRPQV 383
              I G+C   +V
Sbjct: 432 NILIHGMCRMERV 444



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 41/408 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY--------------- 49
           H   P V ++N L+  L KN   D    LF+ + S+   P + TY               
Sbjct: 4   HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 63

Query: 50  -------------------SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
                              +IL+   C+ G++      F ++   C +PNV+T++ LI G
Sbjct: 64  AMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDG 122

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC  +R+ +A  L   +KA GC P+VITY  L++GLC+      A  + +EM +     G
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA----G 178

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            V  PN VTY+ ++ GLC+   V  A  L   M      PNVVTY +LI G C      +
Sbjct: 179 CV--PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 236

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +L +M+D+G  P+++  N+++N LCK  ++D +  LL   V   ++P+  TY++++ 
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C + +++    L + ++S GC  D   Y+ LI+G CK  +V+EA  LY  +   G   
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VVTY+TL  GL +  + + A  L   M        T TY + I GLC
Sbjct: 357 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 154/290 (53%), Gaps = 9/290 (3%)

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           ++  GCEPNV+TYN+LI+GLC+      A  LF+ M +      V   P+ VTY+ ++DG
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS------VECSPSMVTYNTLLDG 54

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + G +++A  LF +M  +  + +V+++  L+ G C A     A     +M D+   PN
Sbjct: 55  LFRTGKLERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPN 112

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V++ +V+++ LCK  ++  A  LL+ M      P+  TY  L+DG C   K+    E+  
Sbjct: 113 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 172

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   GC  +  +YN L++G C+ + V +AL+L  ++  +G  P VVTY TL  GL ++ 
Sbjct: 173 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 232

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA-RRKGNSG 395
           + + A  +  +M       D   Y   I+GLC   QV  + A  R+  SG
Sbjct: 233 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 282



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 43/284 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K        ++   +   G  PDL  Y++LIN  CK  QV     +
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R +     P+VVT++S+I GLC  +R+ EA  L   +K+ GC P+VI Y+TLI+GLC+
Sbjct: 276 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 335

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +L++ MT G+G        + VTYS +IDGLCK G VD+A  L  +M     
Sbjct: 336 AGKVDEAFDLYEVMT-GDG-----CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 389

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLL--------------------------------- 215
            P+ +TY SLI G C  N  +EA  L+                                 
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449

Query: 216 ---IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL-LDLMVQ 255
               EM+D GV P+ ++ ++++  L K+  +     L LD MVQ
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 7/176 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  ++ L+  L K    D    L++ +   G   D+ TYS LI+  CK G+V    +
Sbjct: 320 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHL 379

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R++R    P+ +T+ SLIKGLC  + + EA  L  +++   C P+ +TYN LI+G+C
Sbjct: 380 LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 439

Query: 128 RTGHT-IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           R       AL+ F+EM + NG I     P+ +TYSI+++GL K   + + + L L 
Sbjct: 440 RMERVDSAALDYFQEMID-NGVI-----PDHITYSILLEGLKKSKDLHELRHLVLD 489



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV-SLG 65
           +PP   ++N L+  L    H D  + L + +      P   TY+ILI+  C+M +V S  
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGL 91
              F  ++ +   P+ +T++ L++GL
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGL 474


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 204/372 (54%), Gaps = 7/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +++ L+  L K    D    LF+++      PD+ T++ L++  CK  ++     
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      PNV+T++SLI GLC   ++ +A  +F ++   G EPNV+TYN+LI+G C
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            T     AL L +EMT      G +  P+ +TY+ +IDGLCK G   +A  LF  MK + 
Sbjct: 418 MTNGVDSALLLMEEMT----ATGCL--PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            NP+V+TY+ LI GFC     + A+ L  +M+ Q V P+VV+ + ++   C  G +D+A 
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RLL+ MV  D  P+ +TY +L+DGFC  G++   + +   M   GC+ +  +Y  LI+ +
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAAD 366
           C+  +   A  L  E+   G++P V+TY +L  G       E A K+   ++ ++   AD
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651

Query: 367 TCTYRTFIDGLC 378
              YR  +DGLC
Sbjct: 652 MFAYRVMMDGLC 663



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 201/405 (49%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L +N   D    L   +   GL PD ++Y  L+   CK G++ +   +
Sbjct: 229 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F         P+VV +++LI GLC   R+ EA  LF K++   CEP+V+T+  L++GLC+
Sbjct: 289 FEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 348

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M + N        PN +TYS +IDGLCK G V  A+E+F +M    +
Sbjct: 349 GDRLQEAQQVLETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY SLIHGFC  N  + A  L+ EM   G  P++++ N +++ LCK G+   A+R
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462

Query: 249 -----------------------------------LLDLMVQCDVRPNAFTYNTLMDGFC 273
                                              L D M++  V P+  T++TL++G+C
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G ++  + L   M +  C  D ++Y  L++G+CK   + EA  +   +  +G +P VV
Sbjct: 523 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY  L        +   A +L  EM GN V  +  TYR+ I G C
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFC 627



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 220/444 (49%), Gaps = 66/444 (14%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++ I++  L K        + F ++   G  P+ +TY++LIN FCK+ +V   +++  
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S  APNVVT++++I G C ++++  A  LF ++   GC PN++TYNTL++GLCR G
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245

Query: 131 HTIVALNLFKEMTN------------------GNGEIGVVFK-----------PNTVTYS 161
               A  L  EM                      G+I +  K           P+ V YS
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I GLCK G +D+A +LF +M+  +  P+VVT+T+L+ G C  +   EA+ +L  M D+
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA------------------- 262
              PNV++ + +++ LCK G++ +A  +   M+   + PN                    
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425

Query: 263 ----------------FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                            TYNTL+DG C TG+      LF  M++  C  D  +Y+ LI G
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK + ++ A +L++++  + + P VVT++TL  G       + A +L  EM  +D + D
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545

Query: 367 TCTYRTFIDGLCVRPQVRFTYARR 390
             TY + +DG C     R   ARR
Sbjct: 546 VYTYTSLVDGFC--KVGRMVEARR 567



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 191/405 (47%), Gaps = 44/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  L K+   D    L + +   G  PD   Y+ +I+  CK    +     
Sbjct: 57  PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +   C   NV+T+T +I GLC  +R+ EA   F K+K  G  PN  TYN LING C+
Sbjct: 117 FRSM--EC-EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L KEM            PN VTYS +I G C++  VD A +LF QM     
Sbjct: 174 VHKVHRAYLLLKEMKESG------LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 227

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK------ 242
            PN+VTY +L+ G C     +EA  LL EM ++G+QP+  S + +M  LCK GK      
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287

Query: 243 -----------------------------MDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                        +D A +L + M +    P+  T+  LMDG C
Sbjct: 288 VFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              ++   +++  +ME   C  +  +Y+ LI+G CK  +V +A  ++  +  +GI+P VV
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN+L HG       + AL L  EM       D  TY T IDGLC
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 196/374 (52%), Gaps = 9/374 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L   L + +  D    + K     G+ P+++TY+++I   CK G +     +  
Sbjct: 24  VYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLE 83

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P+   +  +I  LC      +A   F   ++  CE NVIT+  +I+GLC+  
Sbjct: 84  EMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSMECEKNVITWTIMIDGLCKAN 140

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A   F +M       G V  PN  TY+++I+G CK   V +A  L  +MK   L P
Sbjct: 141 RLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 194

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVVTY+++IHGFC     + A  L  +MV+ G  PN+V+ N +++ LC+NG MD A  LL
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 254

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M +  ++P+ F+Y+TLM G C TGKI+   ++F    +  C  D  +Y+ LI G CK 
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             ++EA  L+ ++     +P VVT+  L  GL +  + + A ++   M+  +   +  TY
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374

Query: 371 RTFIDGLCVRPQVR 384
            + IDGLC   QVR
Sbjct: 375 SSLIDGLCKTGQVR 388



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 188/419 (44%), Gaps = 66/419 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L K         + + +      P++ TYS LI+  CK GQV     +
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++     PNVVT+ SLI G C  + +  A  L  ++ A GC P++ITYNTLI+GLC+
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 453

Query: 129 TGHTIVALNLFKEM-----------------------------TNGNGEIGVVFKPNTVT 159
           TG    A  LF +M                             T  +  +     P+ VT
Sbjct: 454 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 513

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +++G C  G VD A+ L  +M   + +P+V TYTSL+ GFC      EA+ +L  M 
Sbjct: 514 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 573

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL----------- 268
            +G QPNVV+   +++  C+ GK   A RLL+ MV   V+PN  TY +L           
Sbjct: 574 KRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 633

Query: 269 -------------------------MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                                    MDG C TG+++   EL  +++  G       Y  L
Sbjct: 634 EARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVAL 693

Query: 304 INGYCKNKEVEEALSLYNELPF-KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I G C+ KE+ +A+ +  E+   +  +P    Y  +   L    + E A  L  E+ GN
Sbjct: 694 IRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 752



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 8/245 (3%)

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL  F   +   G     F  N  TY+ + + L +   +D+   +        + PNV 
Sbjct: 6   AALRFFHWASKQQG-----FDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  +I G C + D ++A  LL EM + G  P+    N +++ LC   K  N ++ LD  
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC---KARNTAKALDYF 117

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
              +   N  T+  ++DG C   ++      F  M+  G   ++++YN+LING+CK  +V
Sbjct: 118 RSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             A  L  E+   G+ P VVTY+T+ HG     + + A KLF +M  N    +  TY T 
Sbjct: 178 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237

Query: 374 IDGLC 378
           + GLC
Sbjct: 238 LSGLC 242



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K +  + NV TY  L      A   +E   +L      G+ PNV +  V++  LCK+G +
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  LL+ M +    P+A  YN ++   C      +  + F SME   C+ +  ++ I+
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIM 132

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK   + EA + + ++  KG  P   TYN L +G  ++ +  RA  L  EM+ + +
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 364 AADTCTYRTFIDGLCVRPQVRFTY 387
           A +  TY T I G C + +V   Y
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAY 216


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 199/375 (53%), Gaps = 33/375 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M P PP +  F+ LL  + + KHY TVLSL+K+++S G+  + YT +ILIN FC + 
Sbjct: 1   MLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F + G IL+  + P+  TFT+LI+GLC E +I EA  LF K+   G +P+V+TY 
Sbjct: 60  RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGN-----------------------------GEIGV 151
           TLINGLC+      AL+LF +M                                   I  
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 152 VFKPNTVTYSIIIDGLCKEGFV---DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
              P+ +T++ ++D LCKEG +   DKA  LF +M  + L P+ VTY +LIHG CH    
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            +A  L  EMV  G  P++V+  ++ + LCKN ++  A  LL ++   ++ P+   Y+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           MDG C  G++   ++LF  + S G   D  +Y I+ING C+   + EA  L+ E+    I
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359

Query: 329 KPTVVTYNTLFHGLF 343
           +         F G+F
Sbjct: 360 ESYSTFSRNAFKGIF 374



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 102/189 (53%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P++V ++ L+        ++    L  +M   G+  N  + N+++N  C   ++  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  +++   +P+  T+ TL+ G C+ GKI    +LF  M   G + D  +Y  LING CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           ++++ EALSL++++  KGI P   TY++L HGL  +   + A++LF  M    +  D  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 370 YRTFIDGLC 378
           + T +D LC
Sbjct: 188 FNTLVDALC 196



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRPNAFTYNTLMDGFCLTGKINRV 281
           P++V  + ++  + +   M + S +L L  Q D   +  N +T N L++ FC   ++   
Sbjct: 8   PSIVDFSKLLTSITR---MKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFA 64

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +   +  +G +    ++  LI G C   ++ EAL L++++  +G +P V+TY TL +G
Sbjct: 65  FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 124

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV----RPQVRFTYA 388
           L + RQ   AL LF +M    ++ +  TY + I GLC+    +  +R  YA
Sbjct: 125 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 175


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 206/378 (54%), Gaps = 9/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+   A+ K  +  + L + +   G  P+L TY++L++  CK+  V     +
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++   FAPNV+TF SL+ G C    + +A  L   + A G  PNV+TY+ LI+GLC+
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   + A  + +EM T G         P+  TYS +I GLCK   +++A+++  +M    
Sbjct: 297 SQKFLEAKEVLEEMKTRG-------VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VV Y+S+IH FC +    EA+  L EM  Q   P+VV+ N +++ LCK GK+  A 
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 248 RLLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L+ M +  DV P+  TY+T+++G C +  +   ++L   M   GC  D  +Y  +I+G
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +EEA  L   +   G  P VVTY TL  GL + R+ + A ++  EM+      +
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY T ++GLCV  +++
Sbjct: 530 LVTYNTMVNGLCVSGRIK 547



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 195/400 (48%), Gaps = 33/400 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NI++            L L + + S G  PD +T++ +I      G +  G + 
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD-GAMD 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R +  C  PNVVT+T+LI       ++ EA  L  +++  GC PN++TYN L++ LC+
Sbjct: 169 HLRSM-GC-DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
                 A ++ K+M  G     V+                              +PN VT
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +IDGLCK     +AKE+  +MK   + P+  TY++LIHG C A+   EA+ +L  M 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P+VV  + I++  CK+GK+  A + L  M +    P+  TYNT++DG C  GKI 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 280 RVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             + +   M+  G    D  +Y+ +ING CK+  + EA  L + +   G  P VVTY T+
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GL +  + E A  L   M+    A +  TY T I GLC
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 196/367 (53%), Gaps = 10/367 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N LL  L + K +     LF+        PD+ +Y+I+I+ FC  G +     +   +
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             + FAP+  T T +I  + A +  ++ A     L++ GC+PNV+TY  LI    R    
Sbjct: 139 KSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ L +EM     E G    PN VTY++++D LCK   V  A+++  +M      PNV
Sbjct: 196 EEAMKLLEEMR----ERGC--PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +T+ SL+ GFC   + ++A+ LL  MV +G++PNVV+ + +++ LCK+ K   A  +L+ 
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V P+AFTY+ L+ G C   KI   +++   M   GC  D   Y+ +I+ +CK+ +
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVAADTCTYR 371
           + EA     E+  +   P VVTYNT+  GL ++ +   A  +  +MQ   DV  D  TY 
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429

Query: 372 TFIDGLC 378
           T I+GLC
Sbjct: 430 TVINGLC 436



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 174/317 (54%), Gaps = 7/317 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K++ +     + + + + G+ PD +TYS LI+  CK  ++     +
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  S   P+VV ++S+I   C   +++EA     +++     P+V+TYNT+I+GLC+
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + ++M     E G V  P+ VTYS +I+GLCK   + +A++L  +M     
Sbjct: 402 LGKIAEAQVILEQMQ----ESGDVL-PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+VVTYT++I G C      EA+ LL  M   G  PNVV+   +++ LCK  K+D A R
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES--MGCKHDDFSYNILING 306
           +++ M      PN  TYNT+++G C++G+I   ++L   M+     C  D  +Y  ++N 
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 307 YCKNKEVEEALSLYNEL 323
              +  V+EA  L  ++
Sbjct: 577 LMSSDLVQEAEQLLEQM 593



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 168/356 (47%), Gaps = 44/356 (12%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K  +++L F  +       F+    ++ SL++ L    +  EA  LF       CEP+V 
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YN +I+G C  G    AL L +EM +        F P+  T++ II  +   G +D A 
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAG------FAPDAFTHTPIITAMANAGDLDGAM 167

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +    M     +PNVVTYT+LI  F  A    EA  LL EM ++G  PN+V+ NV+++ L
Sbjct: 168 DHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224

Query: 238 -----------------------------------CKNGKMDNASRLLDLMVQCDVRPNA 262
                                              CK G +D+A +LL +MV   +RPN 
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY+ L+DG C + K    KE+   M++ G   D F+Y+ LI+G CK  ++EEA  +   
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   G  P VV Y+++ H   +  +   A K   EM+    + D  TY T IDGLC
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC 400



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 156/285 (54%), Gaps = 9/285 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L K    +    + +R+   G  PD+  YS +I+ FCK G++      
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
              + +   +P+VVT+ ++I GLC   +I EA  +  +++  G   P+V+TY+T+INGLC
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++   + A  L   M            P+ VTY+ IIDGLCK G +++A+ L   MK   
Sbjct: 437 KSDMLVEAQKLLDRMCKAG------CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PNVVTYT+LI G C A   +EA+ ++ EM + G  PN+V+ N ++N LC +G++  A 
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550

Query: 248 RLLDLMV--QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           +L+  M   + +  P+A TY T+++    +  +   ++L   M+S
Sbjct: 551 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    SP  V+   ++ G     K  +  + L +   S  + PD+ TYS +IN  CK  
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +  R+ ++   P+VVT+T++I GLC   R+ EA  L   +K  GC PNV+TY 
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+GLC+      A  + +EM N          PN VTY+ +++GLC  G + +A++L 
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAG------CPPNLVTYNTMVNGLCVSGRIKEAQQLV 553

Query: 181 LQMK--YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            +MK      +P+  TY ++++    ++   EA+ LL +M
Sbjct: 554 QRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           ++ SL+          EA  L    +    +P+V S N++++  C  G +  A  LL+ M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+AFT+  ++      G ++   +    + SMGC  +  +Y  LI  + + K++
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA+ L  E+  +G  P +VTYN L   L ++     A  +  +M     A +  T+ + 
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 374 IDGLCVRPQV 383
           +DG C R  V
Sbjct: 256 VDGFCKRGNV 265


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 198/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+        +  V+ + + +++ GL PD  TY++L++  CK G+     + 
Sbjct: 229 PDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLF 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P+V  +  L+ G   +  + E  +    +   G  PN   +N +     +
Sbjct: 289 FDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAK 348

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+++F +M            P+ V++  +ID LCK G VD A   F QM  E +
Sbjct: 349 KAMIEEAMHIFNKMRQQG------LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  ++SL++G C    W +A+ L  E++DQG+  + V  N +M  LC  G++  A R
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+DLM++  VRPN  +YNTL+ G CLTG+I+   +L   M S G K ++F+Y IL+ GYC
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + V++A SL+ E+  KG+ P V TYNT+ HGLF+  +   A +L++ M  +    D  
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 369 TYRTFIDGLC 378
           TY   ++GLC
Sbjct: 583 TYNIILNGLC 592



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 204/378 (53%), Gaps = 13/378 (3%)

Query: 8   PPPVSSFNILLGCLAK---NKHYDTVLSLFKRLN---SIGLFPDLYTYSILINCFCKMGQ 61
           P  V +FN LL  +++   +   + V+SLF R+    S  + P+  TYSILI CFC+MG+
Sbjct: 46  PASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGR 105

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYN 120
           +  GF  FG IL++ +  NV+  + L+KGLC   R+ EA   L  ++  FGC P+V+ YN
Sbjct: 106 LEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+ING  R G    A NLF EM +          PN VTY+ +IDGLCK   VD+AK +F
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQG------IPPNVVTYTTVIDGLCKAQVVDRAKGVF 219

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QM    + P+  TY  LIHG+     W E   +L EM   G++P+ ++  ++++ LCKN
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+   A    D M +  ++P+   Y  L+ G+   G ++ +      M   G   +   +
Sbjct: 280 GRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIF 339

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NI+   Y K   +EEA+ ++N++  +G+ P VV++  L   L ++ + + A+  F +M  
Sbjct: 340 NIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMIN 399

Query: 361 NDVAADTCTYRTFIDGLC 378
             V  +   + + + GLC
Sbjct: 400 EGVTPNIFVFSSLVYGLC 417



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 195/408 (47%), Gaps = 41/408 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++ +LL  L KN         F  +   G+ PD+  Y+IL++ +   G +S 
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE 319

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
                  ++ +  +PN   F  +      ++ I EA  +F K++  G  P+V+++  LI+
Sbjct: 320 MHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALID 379

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+ G    A+  F +M N     GV   PN   +S ++ GLC  G  +KA+ELF ++ 
Sbjct: 380 ALCKLGRVDDAVLQFNQMINE----GVT--PNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + +  + V + +L+   C+     EA+ L+  M+  GV+PNV+S N ++   C  G++D
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFC------------------------------- 273
            A++LLD+MV   ++PN FTY  L+ G+C                               
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 274 ----LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
                TG+ +   EL+++M +   K D ++YNI++NG CKN  V+EA  ++  L  K  +
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              VT+N +   L +  + E A+ LF  +    +  D  TYR   + L
Sbjct: 614 LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL 661



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI+    AK    +  + +F ++   GL PD+ ++  LI+  CK+G+V    + 
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN+  F+SL+ GLC   +  +A  LF ++   G   + + +NTL+  LC 
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M      I V  +PN ++Y+ ++ G C  G +D+A +L   M    L
Sbjct: 454 EGRVMEAQRLIDLM------IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT L+ G+C A   ++A  L  EM+ +GV P V + N I++ L + G+   A+ 
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+    + + +TYN +++G C    ++   ++F  + S   + D  ++NI+I    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +   G+ P VVTY  +   L E         LF  M+ +  A ++ 
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R  +
Sbjct: 688 MLNALVRRLLHRGDI 702



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 1/283 (0%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA  LF +L       +V  +N L+  + R G +  +  +    T    E      PN  
Sbjct: 32  EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG-LLIE 217
           TYSI+I   C+ G ++     F  +       NV+  + L+ G C A   +EA   LL+ 
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M + G  P+VV+ N ++N   + G+++ A  L   M+   + PN  TY T++DG C    
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++R K +F  M   G K D+ +YN LI+GY    + +E + +  E+   G++P  +TY  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           L   L +  +   A   F  M    +  D   Y   + G   +
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATK 314



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 6/312 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN L+  L           L   +  +G+ P++ +Y+ L+   C  G++     +   ++
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +   PN  T+T L++G C   R+ +A +LF ++   G  P V TYNT+++GL +TG   
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L+  M N         K +  TY+II++GLCK  FVD+A ++F ++  ++   + V
Sbjct: 564 EANELYLNMINSRT------KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV 617

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+  +I          +A  L   +   G+ P+VV+  +I   L + G +     L   M
Sbjct: 618 TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAM 677

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    PN+   N L+      G I+R       ++      +  + ++LI+ Y + +  
Sbjct: 678 EKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQ 737

Query: 314 EEALSLYNELPF 325
             A SL  +  F
Sbjct: 738 PHAKSLPEKYRF 749



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 4/215 (1%)

Query: 174 DKAKELFLQMKYE---NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           ++   LF +M  E    + PN  TY+ LI  FC              ++  G + NV+  
Sbjct: 69  ERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVI 128

Query: 231 NVIMNELCKNGKMDNASRLLDL-MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
           + ++  LC   ++D A+ +L L M +    P+   YNT+++GF   G++ +   LF+ M 
Sbjct: 129 SQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMM 188

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   +  +Y  +I+G CK + V+ A  ++ ++  +G+KP   TYN L HG     + +
Sbjct: 189 DQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWK 248

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +++  EM  + +  D  TY   +D LC   + R
Sbjct: 249 EVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCR 283



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 2   RHMHPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           R +    P + S  FNI++G L K    +  + LF  +++ GL PD+ TY ++     + 
Sbjct: 605 RRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEE 664

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVI 117
           G +     +F  + +S  APN     +L++ L     I  A     KL  K F  E +  
Sbjct: 665 GSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTT 724

Query: 118 T 118
           +
Sbjct: 725 S 725


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN+L   +AK KHY T +SL K ++ IG+ P ++T +I+INC C++     GF +
Sbjct: 81  PCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSV 140

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + +    P++VTF +++ GLC E  + +A      LK  G E +  T   + NGLC+
Sbjct: 141 LGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCK 200

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH+  AL+  K+M   N  + V        YS ++DGLCK+G V +A  LF QM  + +
Sbjct: 201 VGHSSAALSYLKKMEEKNCNLDVT------AYSGVVDGLCKDGMVFEALNLFSQMTGKGI 254

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY  LIHG C+ + W EA  LL  M+ +G+ P+V + NVI     K G +  A  
Sbjct: 255 QPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKS 314

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   +  +  TY +++   C+  ++    E+F  M S GC  +  +Y  LI+G+C
Sbjct: 315 IFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWC 374

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + K + +A+    E+   G+ P VVT++TL  G+ +  +   A +LF+ M  +    +  
Sbjct: 375 ETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQ 434

Query: 369 TYRTFIDGL 377
           T    +DGL
Sbjct: 435 TCAIILDGL 443



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 182/363 (50%), Gaps = 6/363 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K  H    LS  K++       D+  YS +++  CK G V     +F ++      P+
Sbjct: 198 LCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPD 257

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           + T+  LI GLC   R  EAA L   +   G  P+V T+N +     +TG    A ++F 
Sbjct: 258 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFS 317

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            M +    +G+  + + VTY+ II   C    +  A E+F  M  +   PN+VTYTSLIH
Sbjct: 318 FMVH----MGI--EHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIH 371

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+C   + N+A   L EMV+ G+ PNVV+ + ++  +CK GK   A  L  +M +    P
Sbjct: 372 GWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLP 431

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N  T   ++DG       +    LF  +E M    +   YNI+++G C + ++ +AL L+
Sbjct: 432 NLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELF 491

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           + L  KG+K  VVTYN +  GL +    + A  L ++M+ N    + CTY  F+ GL  R
Sbjct: 492 SYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRR 551

Query: 381 PQV 383
            Q+
Sbjct: 552 YQI 554



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 160/304 (52%), Gaps = 6/304 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN++ G   K        S+F  +  +G+  D+ TY+ +I   C + Q+     +
Sbjct: 291 PDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEV 350

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN+VT+TSLI G C    + +A     ++   G +PNV+T++TLI G+C+
Sbjct: 351 FDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCK 410

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  LF  M + +G++     PN  T +II+DGL K  F  +A  LF +++  N 
Sbjct: 411 AGKPVAAKELFLVM-HKHGQL-----PNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNW 464

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N++ Y  ++ G C +   N+A  L   +  +GV+ +VV+ N+++  LCK G +D+A  
Sbjct: 465 DLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAED 524

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    PN  TYN  + G     +I++  +  + M+  G + D  +   LIN + 
Sbjct: 525 LLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFS 584

Query: 309 KNKE 312
            NKE
Sbjct: 585 ANKE 588



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 6/271 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P V  +N L + + +  H   A++L K M+     IGV  KP   T +I+I+ LC+    
Sbjct: 81  PCVKDFNLLFSIVAKMKHYTTAISLIKHMS----YIGV--KPTVHTLNIVINCLCRLSHA 134

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                +   M    + P++VT+ ++++G C   +  +A   +  + D G + +  +   I
Sbjct: 135 VFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAI 194

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
            N LCK G    A   L  M + +   +   Y+ ++DG C  G +     LF  M   G 
Sbjct: 195 TNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGI 254

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D F+YN LI+G C     +EA  L   +  KGI P V T+N +    F+     RA  
Sbjct: 255 QPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKS 314

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +F  M    +  D  TY + I   C+  Q++
Sbjct: 315 IFSFMVHMGIEHDVVTYTSIIGAHCMLNQMK 345



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H   P + +  I+L  L K   +   +SLF+ L  +    ++  Y+I+++  C  G++
Sbjct: 425 HKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKL 484

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  +       +VVT+  +IKGLC E  + +A  L  K++  GC PN  TYN  
Sbjct: 485 NDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVF 544

Query: 123 INGLCR 128
           + GL R
Sbjct: 545 VQGLLR 550


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 210/400 (52%), Gaps = 29/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +++ L+  L K +  +   ++ + +   G+ P+  TY+I+I  +C +GQ+     
Sbjct: 235 PPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVR 294

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++  S   P+VVT+  LI+  C   R  EA ++F  +   G +PN   Y+ L++G  
Sbjct: 295 LLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 354

Query: 128 RTGHTIVALNLFKEMTNGN---------------GEIGVV--------------FKPNTV 158
             G  I   +L   M                    + G V               +P+ V
Sbjct: 355 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 414

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +YS +I  LCK G V+ A   F QM  E L+PN++++TSLIHG C   +W + + L  EM
Sbjct: 415 SYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 474

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +++G+ P+ +  N IM+ LCK G++  A    D+++   V+PN  +YNTL+DG+C  GK+
Sbjct: 475 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKM 534

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   + F  M S+G + D ++YN L+NGY KN  VE+AL+LY E+  K +K   +T N +
Sbjct: 535 DESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNII 594

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+  +   A +L+++M          TY T + GLC
Sbjct: 595 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 634



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 206/420 (49%), Gaps = 49/420 (11%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIG---LFPDLYTYSILIN 54
              P  V +FN +L  +A+     +        +SLF  +   G   +  + Y   ILI 
Sbjct: 43  QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMAANRYIIGILIR 102

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCE 113
           CFC +G++ L F  F   L+  +    VT   LIKGLC   R  +A  + F ++   G  
Sbjct: 103 CFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYT 162

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+V +YN LI GLC    +  AL L   MT    + G    PN V+YS IIDG  KEG V
Sbjct: 163 PDVFSYNALIKGLCVEKKSQEALELLLHMT---ADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA  LF +M  +   P+VVTY+SLI G C A   N+A+ +L  M D+GV PN  + N++
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 234 MNELCKNGKMDNASRLL-----------------------------------DLMVQCDV 258
           +   C  G+++ A RLL                                   D MV+   
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +PN+  Y+ L+ G+   G +  V++L   M   G   +  ++NILI  Y K+  V++A++
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + E+   G++P VV+Y+T+ H L +I + E A+  F +M    ++ +  ++ + I GLC
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 196/377 (51%), Gaps = 6/377 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    +FNIL+   AK+   D  ++ F  +   GL PD+ +YS +I+  CK+G+V     
Sbjct: 375 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVY 434

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F +++    +PN+++FTSLI GLC+     +   L  ++   G  P+ I  NT+++ LC
Sbjct: 435 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 494

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + A + F  + +    IGV  KPN V+Y+ +IDG C  G +D++ + F +M    
Sbjct: 495 KEGRVVEAQDFFDMVIH----IGV--KPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIG 548

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TY +L++G+       +A  L  EM  + V+   ++SN+I++ L + G++  A 
Sbjct: 549 LRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAR 608

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   MV    +    TYNT++ G C    ++    +F  + S   + D +++NI+IN  
Sbjct: 609 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINAL 668

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   ++EA SL++ +  +G  P V+TY+ +     E    E +  LF+ M+ N  AAD+
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADS 728

Query: 368 CTYRTFIDGLCVRPQVR 384
                 I  L  +  VR
Sbjct: 729 HMLNVIIRRLLEKGDVR 745



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 196/376 (52%), Gaps = 12/376 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSL-FKRLNSIGLFPDLYTYSILINCFC--KMGQVSLGFVIF 69
           + N L+  L   K  D  + + F+R+  +G  PD+++Y+ LI   C  K  Q +L  ++ 
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190

Query: 70  --GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
                  +C +PNVV+++++I G   E  + +A  LF ++   G  P+V+TY++LI+GLC
Sbjct: 191 MTADGGYNC-SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC 249

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A+N  + +     + GV+  PNT TY+I+I G C  G +++A  L  +M    
Sbjct: 250 KAQ----AMNKAEAILQHMFDKGVM--PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVTY  LI  +C      EA+ +   MV +G +PN    +++++     G + +  
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LLDLM++  +      +N L+  +   G +++    F  M   G + D  SY+ +I+  
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   VE+A+  +N++  +G+ P ++++ +L HGL  I + ++  +L  EM    +  D 
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 368 CTYRTFIDGLCVRPQV 383
               T +D LC   +V
Sbjct: 484 IFMNTIMDNLCKEGRV 499



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + ++ILL   A       V  L   +   G+  +   ++ILI  + K G V      
Sbjct: 341 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + ++   P+VV+++++I  LC   R+ +A   F ++ + G  PN+I++ +LI+GLC 
Sbjct: 401 FTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM N          P+ +  + I+D LCKEG V +A++ F  + +  +
Sbjct: 461 IGEWKKVEELAFEMINRG------IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y +LI G+C     +E+      MV  G++P+  + N ++N   KNG++++A  
Sbjct: 515 KPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALA 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M + DV+  A T N ++ G    G+I   +EL++ M   G +    +YN ++ G C
Sbjct: 575 LYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 634

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N  V+EAL ++ +L  K  +  V T+N + + L ++ + + A  LF  M          
Sbjct: 635 ENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVI 694

Query: 369 TYRTFI 374
           TY   I
Sbjct: 695 TYSLMI 700



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 4/203 (1%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQC 256
           LI  FC     + A       +  G +   V+ N ++  LC   + D+A  ++   M + 
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---CKHDDFSYNILINGYCKNKEV 313
              P+ F+YN L+ G C+  K     EL + M + G   C  +  SY+ +I+G+ K  EV
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++A  L++E+  +G  P VVTY++L  GL + +   +A  +   M    V  +T TY   
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 374 IDGLCVRPQVRFTYARRKGNSGN 396
           I G C   Q+       K  SG+
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGS 302


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 203/386 (52%), Gaps = 10/386 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P  SS N L+  L K KHYD V+S+  ++ S+ +FP   + S LI  F    + S  F
Sbjct: 55  SIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            + G I++  F  NV  F  L+KG C      +A  LF  +K     P+ ++YNT+INGL
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+    + A  LFKEM  G        KPN+VT+S +IDG CK G V++   L  +M+  
Sbjct: 175 CKGKRLVEAKELFKEMKGGE------CKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM 228

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  +V  Y++LI GFC   D    K L  EM+ + V PNVV+ + +MN LCK  K   A
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +++LD M  C VRP+   Y  L DG    G+ +   ++   M   G + ++ +YN +ING
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIING 348

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VA 364
            CK   V++AL +   +  KG KP VVTY+TL  GL  + + + A+ L   +   +  + 
Sbjct: 349 LCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIK 408

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYARR 390
            D   +   I  LC   Q R  +A+R
Sbjct: 409 PDVFAFNLVIQELC--KQRRLRHAKR 432



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L   L+KN      + +   +   G  P+  TY+ +IN  CK G+V     I
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGL 126
              + +    P+VVT+++L+KGLC   +I EA  L   L  K F  +P+V  +N +I  L
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A  ++  M     E G  F  N VTY+I+IDG    G + KA EL+      
Sbjct: 422 CKQRRLRHAKRVYYTMV----ERG--FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            ++PN  TYT LI+G C     + AKGL  +    G +P V   N +M  LC+   ++ A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M   +  P+  ++N ++DG    G +   KEL + M +M    D+ +++ILIN 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + K  +++EA SLY  +   G  P  V +++L  G     + E+ + +  +M   DV  D
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655

Query: 367 TCTYRTFIDGLC 378
           +    T +  LC
Sbjct: 656 SKLTSTILACLC 667



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 176/372 (47%), Gaps = 4/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K + +     +   +    + PD+  Y++L +   K G+ S    +
Sbjct: 267 PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKV 326

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN VT+ ++I GLC E R+ +A  +   +   G +P+V+TY+TL+ GLC 
Sbjct: 327 LDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCG 386

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L   + +    I    KP+   ++++I  LCK+  +  AK ++  M     
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHI----KPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY  LI G+  A    +A  L  + VD G+ PN  +  V++N LCK   +  A  
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKG 502

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +       RP    YNTLM   C    + + + LF  M +     D  S+NI+I+G  
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +VE A  L  E+    + P  +T++ L +   ++ Q + A  L+  M       D  
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622

Query: 369 TYRTFIDGLCVR 380
            + + + G  ++
Sbjct: 623 LFDSLLKGYSLK 634



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 6/243 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++NIL+            L L+K     G+ P+  TY++LIN  CKM  +S+   
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKG 502

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F +   S   P V  + +L+  LC ES + +A  LF +++    +P+V+++N +I+G  
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A    KE+      + +V  P+ +T+SI+I+   K G +D+A  L+ +M    
Sbjct: 563 KAGDVESA----KELLLEMLNMNLV--PDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ V + SL+ G+       +   +L +M D+ V  +   ++ I+  LC   K  +  
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIE 676

Query: 248 RLL 250
           ++L
Sbjct: 677 KIL 679



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y N  P+  +  +LI     A  ++    +  +M    V P   S + ++       K  
Sbjct: 52  YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPS 111

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +L L+++     N + +N L+ GFC +G  ++  +LF  M+      D  SYN +I
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVI 171

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NG CK K + EA  L+ E+     KP  VT++ L  G  +    E    L  EM+   + 
Sbjct: 172 NGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLE 231

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            D   Y   I G C +  + 
Sbjct: 232 GDVFVYSALISGFCSKGDIE 251


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 202/382 (52%), Gaps = 30/382 (7%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V +++ ++  L+K +  D    +F R+   G+ PD   Y+ L++ +C  G+    
Sbjct: 239 PSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEA 297

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             IF ++ R    P+VVT+T+L+  LC   +  EA  +F  L   G +P+  TY TL++G
Sbjct: 298 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 357

Query: 126 LCRTG-----HTIVALNLFKEMTNGN----------------GEIGVVFK--------PN 156
               G     H ++ L + K M  G+                 E  +VF         P+
Sbjct: 358 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPD 417

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V Y  ++D LC  G VD A   F  +K E L PN+V +T+LIHG C  + W++ + L  
Sbjct: 418 IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAF 477

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM+D+G+  + +  N IM  LCK G++  A  L DLMV+  + PN  TYNTL+DG+CL G
Sbjct: 478 EMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDG 537

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K++   +L   M   G K  D +YN +INGY +N  +E+ L+L  E+  KG+ P +VTY 
Sbjct: 538 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 597

Query: 337 TLFHGLFEIRQAERALKLFVEM 358
            L  GLF+  +   A +L++ M
Sbjct: 598 MLLQGLFQAGRTVAAKELYLRM 619



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 192/391 (49%), Gaps = 48/391 (12%)

Query: 30  VLSLFKRLNSIGL---FPDLYTYSILINCFCKMGQVSLGFVIFGRILRS----------- 75
            +SLF R+   G     P++ TY I+I C  ++G++ L F   GR++ +           
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139

Query: 76  ------CFA--------------------PNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
                 C A                    P++ ++T L+KGLC +    +A  L   +  
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD 199

Query: 110 FG--CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
               C  +V+ Y T+INGL R G    A +LF  M +          P+ VTYS II  L
Sbjct: 200 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS------PDVVTYSSIISAL 253

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K   +DKA ++F +M    + P+ + YTSL+HG+C +    EA G+  +M   GV+P+V
Sbjct: 254 SKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDV 313

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+   +M+ LCKNGK   A ++ D +V+   +P++ TY TL+ G+   G +  + +L   
Sbjct: 314 VTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDL 373

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G +     +N+++  Y K+ +V+EAL +++ +  +G+ P +V Y T+   L    +
Sbjct: 374 MMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR 433

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + AL  F  ++   +A +   + T I GLC
Sbjct: 434 VDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 464



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 188/385 (48%), Gaps = 12/385 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC--K 58
           +RH  P+P   SS   L     +    D VL   +R+  +G  PDL++Y+IL+   C  K
Sbjct: 130 LRH-EPNPLQSSSQGPLCTAGGRAMRMDIVL---RRMPELGCKPDLFSYTILLKGLCDDK 185

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             Q +L  +      +     +VV +T++I GL  E ++ +A +LF  +   G  P+V+T
Sbjct: 186 TSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVT 245

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y+++I+ L +T     A  +F  M   NG +     P+ + Y+ ++ G C  G   +A  
Sbjct: 246 YSSIISALSKTQAMDKATQVFTRMVK-NGVM-----PDCIMYTSLVHGYCSSGKPKEAIG 299

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F +M    + P+VVTYT+L+   C      EA+ +   +V +G +P+  +   +++   
Sbjct: 300 IFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYA 359

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G +     LLDLM++  ++     +N +M  +    K++    +F +M   G   D  
Sbjct: 360 TEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIV 419

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +++  C    V++ALS +N L  +G+ P +V + TL HGL    + ++  +L  EM
Sbjct: 420 NYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEM 479

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
               +  DT  +   +  LC + +V
Sbjct: 480 IDRGICLDTIFFNAIMGNLCKKGRV 504



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 6/244 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN+++G  AK+   D  L +F  +   GL PD+  Y  +++  C  G+V      F  + 
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               APN+V FT+LI GLC   +  +   L  ++   G   + I +N ++  LC+ G  I
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A NLF  M      IG+  +PNT TY+ +IDG C +G +D+A +L   M +  + P+ V
Sbjct: 506 EAKNLFDLMV----RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 559

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I+G+       +   LL EM  +GV P +V+  +++  L + G+   A  L   M
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619

Query: 254 VQCD 257
           ++ D
Sbjct: 620 IKWD 623


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 202/382 (52%), Gaps = 30/382 (7%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V +++ ++  L+K +  D    +F R+   G+ PD   Y+ L++ +C  G+    
Sbjct: 238 PSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEA 296

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             IF ++ R    P+VVT+T+L+  LC   +  EA  +F  L   G +P+  TY TL++G
Sbjct: 297 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 356

Query: 126 LCRTG-----HTIVALNLFKEMTNGN----------------GEIGVVFK--------PN 156
               G     H ++ L + K M  G+                 E  +VF         P+
Sbjct: 357 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPD 416

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V Y  ++D LC  G VD A   F  +K E L PN+V +T+LIHG C  + W++ + L  
Sbjct: 417 IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAF 476

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM+D+G+  + +  N IM  LCK G++  A  L DLMV+  + PN  TYNTL+DG+CL G
Sbjct: 477 EMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDG 536

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K++   +L   M   G K  D +YN +INGY +N  +E+ L+L  E+  KG+ P +VTY 
Sbjct: 537 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 596

Query: 337 TLFHGLFEIRQAERALKLFVEM 358
            L  GLF+  +   A +L++ M
Sbjct: 597 MLLQGLFQAGRTVAAKELYLRM 618



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 35/384 (9%)

Query: 30  VLSLFKRLNSIGL---FPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
            +SLF R+   G     P++ TY I+I C  ++G++ L F   GR++ +    + + F+ 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 87  LIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           L+KGLC   R  +A  +   ++   GC+P++ +Y  L+ GLC    +  AL+L   M + 
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 146 NGE--IGVVF-----------------------------KPNTVTYSIIIDGLCKEGFVD 174
            G   + VV                               P+ VTYS II  L K   +D
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           KA ++F +M    + P+ + YTSL+HG+C +    EA G+  +M   GV+P+VV+   +M
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCKNGK   A ++ D +V+   +P++ TY TL+ G+   G +  + +L   M   G +
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 379

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
                +N+++  Y K+ +V+EAL +++ +  +G+ P +V Y T+   L    + + AL  
Sbjct: 380 LGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQ 439

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F  ++   +A +   + T I GLC
Sbjct: 440 FNSLKSEGLAPNIVVFTTLIHGLC 463



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 185/376 (49%), Gaps = 8/376 (2%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC--KMGQVSLGFV 67
           P+    +L G   + +  D +  + +R+  +G  PDL++Y+IL+   C  K  Q +L  +
Sbjct: 134 PILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL 193

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
                 +     +VV +T++I GL  E ++ +A +LF  +   G  P+V+TY+++I+ L 
Sbjct: 194 HIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALS 253

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +T     A  +F  M   NG +     P+ + Y+ ++ G C  G   +A  +F +M    
Sbjct: 254 KTQAMDKATQVFTRMVK-NGVM-----PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 307

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VVTYT+L+   C      EA+ +   +V +G +P+  +   +++     G +    
Sbjct: 308 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMH 367

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LLDLM++  ++     +N +M  +    K++    +F +M   G   D  +Y  +++  
Sbjct: 368 DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL 427

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    V++ALS +N L  +G+ P +V + TL HGL    + ++  +L  EM    +  DT
Sbjct: 428 CTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDT 487

Query: 368 CTYRTFIDGLCVRPQV 383
             +   +  LC + +V
Sbjct: 488 IFFNAIMGNLCKKGRV 503



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 6/244 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN+++G  AK+   D  L +F  +   GL PD+  Y  +++  C  G+V      F  + 
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               APN+V FT+LI GLC   +  +   L  ++   G   + I +N ++  LC+ G  I
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A NLF  M      IG+  +PNT TY+ +IDG C +G +D+A +L   M +  + P+ V
Sbjct: 505 EAKNLFDLMV----RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 558

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I+G+       +   LL EM  +GV P +V+  +++  L + G+   A  L   M
Sbjct: 559 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618

Query: 254 VQCD 257
           ++ D
Sbjct: 619 IKWD 622


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 118/302 (39%), Positives = 187/302 (61%), Gaps = 6/302 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P +VTF +L+ GLC++++I++A  LF ++   G EP+VITY+T+INGLC+ G+T +AL
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L K+M     E G   KPN V Y+ IID LCK+  V +A + F +M  E + P+V TY+
Sbjct: 66  QLLKKME----EKGC--KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           S++HGFC+    NEA  L  +MV++ V PN V+  ++++ LCK   +  A  + + M + 
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + P+ +TYN L+DG+C   +++  ++LF  M+  GC  +  SYNILING+CK+  ++EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L  E+  K + P + TY+TL  G  ++ + + A +L  EM    +  +  TY   +DG
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 377 LC 378
           LC
Sbjct: 300 LC 301



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K++     +  F  +   G+ PD++TYS +++ FC +G+V+    +
Sbjct: 78  PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN VTFT LI GLC +  I EA  +F  +   G EP+V TYN L++G C 
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  M            PN  +Y+I+I+G CK G +D+AK L  +M +++L
Sbjct: 198 RSQMDEAQKLFNIMDRKG------CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY++L+ GFC      EA+ LL EM   G+ PN+++ +++++ LCK+G +D A  
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  + PN F Y  L++G C  GK+   +ELF ++   G +    +Y ++I+G  
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  L+ E+   G  P   TYN +  G         A++L  EM G   +AD+ 
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431

Query: 369 TYRTFID 375
           T+R   D
Sbjct: 432 TFRMLSD 438



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/404 (34%), Positives = 207/404 (51%), Gaps = 43/404 (10%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + +FN LL G  +K K  D V  LF  +  +G  PD+ TYS +IN  CKMG  ++   
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++      PNVV + ++I  LC +  + EA   F+++   G  P+V TY+++++G C
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A +LFK+M   N        PN VT++I+IDGLCK+  + +A  +F  M  + 
Sbjct: 127 NLGRVNEATSLFKQMVERN------VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V TY +L+ G+C  +  +EA+ L   M  +G  PNV S N+++N  CK+G++D A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--------------- 292
            LL  M    + P+ FTY+TLM GFC  G+    +EL   M S G               
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 293 CKHDD--------------------FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           CKH                      F Y ILI G C   ++E A  L++ L  KGI+PTV
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           VTY  +  GL +   +  A +LF EM  N    ++CTY   I G
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 180/339 (53%), Gaps = 6/339 (1%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +GL P L T++ L++  C   ++     +F  +++    P+V+T++++I GLC       
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  L  K++  GC+PNV+ YNT+I+ LC+      A++ F EM            P+  T
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG------IPPDVFT 117

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS I+ G C  G V++A  LF QM   N+ PN VT+T LI G C     +EA  +   M 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G++P+V + N +++  C   +MD A +L ++M +    PN  +YN L++G C +G+I+
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             K L   M       D F+Y+ L+ G+C+    +EA  L  E+   G+ P ++TY+ + 
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GL +    + A +L   MQ + +  +   Y   I+G+C
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 6/331 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +++ +L         +   SLFK++    + P+  T++ILI+  CK   +S  ++
Sbjct: 112 PPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWL 171

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+V T+ +L+ G C+ S++ EA  LF  +   GC PNV +YN LING C
Sbjct: 172 VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++G    A  L  EM++ +        P+  TYS ++ G C+ G   +A+EL  +M    
Sbjct: 232 KSGRIDEAKGLLAEMSHKS------LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN++TY+ ++ G C     +EA  LL  M +  ++PN+    +++  +C  GK++ A 
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAR 345

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   +    ++P   TY  ++ G    G  N   ELF  M   GC  +  +YN++I G+
Sbjct: 346 ELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGF 405

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +N +   A+ L  E+  KG      T+  L
Sbjct: 406 LRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 5/214 (2%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P +VT+ +L+ G C      +A  L  EMV  G +P+V++ + I+N LCK G    A 
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL  M +   +PN   YNT++D  C    +    + F  M   G   D F+Y+ +++G+
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    V EA SL+ ++  + + P  VT+  L  GL + R    A  +F  M    +  D 
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 368 CTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
            TY   +DG C R Q+      F    RKG + N
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPN 219



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 94/170 (55%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M   G+QP +V+ N +++ LC   K+ +A +L D MV+    P+  TY+T+++G C  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                +L   ME  GCK +  +YN +I+  CK++ V EA+  ++E+  +GI P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           + HG   + +   A  LF +M   +V  +  T+   IDGLC +  +   +
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 210/379 (55%), Gaps = 6/379 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ LL  +AK K Y+ V+SLF+ +  +G+  DLY++S LI+CFC+  ++SL    
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++VTF SL+ G C  +RI EA +L  ++   G EPNV+ YNT+I+ LC 
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL++   M     ++G+  +P+ +TY+ +I  L   G    +  +   M    +
Sbjct: 191 NRQVDTALDVLNHME----KMGI--RPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V+T++++I  F       EAK    EM+ + V PN+V+ N ++N LC +G +D A +
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ MV     PNA TYNTL++G+C + +++   ++   M   G   D F+YN L  GYC
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +   A  +   +   G+ P + T+N L  GL E  + E+AL    ++Q ++      
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424

Query: 369 TYRTFIDGLCVRPQVRFTY 387
           TY   I G+C   +V   +
Sbjct: 425 TYNIIIKGMCKANKVEDAW 443



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 165/315 (52%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L +N+  DT L +   +  +G+ PD+ TY+ LI      G+  +   I
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARI 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P+V+TF+++I     E +++EA   + ++     +PN++TYN+LINGLC 
Sbjct: 236 LSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCI 295

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +   M +        F PN VTY+ +++G CK   VD A ++   M ++ +
Sbjct: 296 HGLLDEAKKVLNFMVSKG------FFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +  TY +L  G+C A  +N A+ +L  MV  GV P++ + N++++ LC++GK++ A  
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ + + +      TYN ++ G C   K+     LF S+   G   D  +Y  ++ G  
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLR 469

Query: 309 KNKEVEEALSLYNEL 323
           + +   EA  LY ++
Sbjct: 470 RKRLWLEAHELYRKM 484



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 88/183 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y   +    H+  +N+A  L  +M +    P++V  + ++  + K  K +    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              +  + ++++TL+D FC   +++        M  +G +    ++  L+NG+C    ++
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+SL +++   G +P VV YNT+   L E RQ + AL +   M+   +  D  TY + I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 375 DGL 377
             L
Sbjct: 221 TRL 223



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 73/135 (54%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L     +   ++    +  R+ S G+ PD+YT+++L++  C+ G++    V    +
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +S     ++T+  +IKG+C  +++ +A  LF  L   G  P+VITY T++ GL R    
Sbjct: 415 QKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLW 474

Query: 133 IVALNLFKEMTNGNG 147
           + A  L+++M   +G
Sbjct: 475 LEAHELYRKMKKDDG 489



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 69/142 (48%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K ++A  L   M +    P+   ++ L+       K   V  LF  +E +G  HD +S++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+ +C+   +  ALS   ++   G +P++VT+ +L +G   + + + A+ L  ++ G 
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
               +   Y T ID LC   QV
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQV 194


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 220/417 (52%), Gaps = 53/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S+N L+         +  L L   +     +   PD+ +Y+ +IN F + GQV   
Sbjct: 264 PNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKA 323

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F +++     P+VVT+ ++I GLC    +  A A+F ++   G +P+  TYN LI+G
Sbjct: 324 YNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHG 383

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG-------------- 171
              TG     + L +EM+  +       +P+   Y++++D LCK G              
Sbjct: 384 YLSTGKWKEVVRLLEEMSTHD------LEPDCFIYALLLDYLCKNGRCTEARNIFDSVIR 437

Query: 172 -------FVDKAKELFLQMKYENLNPNVVTYTSLI-----------------------HG 201
                   +D+A  +F +M+ + L+PNVV Y +LI                       +G
Sbjct: 438 KGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG 497

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C    W +A+ L+ EM+DQG++ +VV  N +M +LC+ G++  A RL++LM++  VRP+
Sbjct: 498 LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             +YNTL+DG CLTG+ +   +L   M S+G K ++F+YN L++GYCK + +++A SL  
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E+   G  P VVTYNT+ HGLF+  +   A +L++ M  +    D  TY   ++GLC
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC 674



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 205/412 (49%), Gaps = 50/412 (12%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVL------SLFKRLN---SIGLFPDLYTYSILINC 55
           H  P  V++FN LL  +++     + L      SLF R+    S  + PD  TYSILI C
Sbjct: 145 HARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGC 204

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEP 114
           FC+MG++  GF +FG IL++ +  N + F  L+KGLC   R+ EA   L  ++  FGC P
Sbjct: 205 FCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTP 264

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           NV++YNTL+ G C       AL L   M +     G+   P+ V+Y+ +I+G  +EG VD
Sbjct: 265 NVVSYNTLVKGFCNENRAEEALELLHVMADDQ---GLSCPPDVVSYNTVINGFFREGQVD 321

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           KA  LFLQM    + P+VVTY ++I G C A   + AK +  +M+D+GV+P+  + N ++
Sbjct: 322 KAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLI 381

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +     GK     RLL+ M   D+ P+ F Y  L+D  C  G+    + +F S+   G K
Sbjct: 382 HGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIK 441

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF--------------- 339
            D                ++EA+ +++++  +G+ P VV Y  L                
Sbjct: 442 PDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILK 487

Query: 340 --------HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                   +GL  + + E+A +L  EM    +  D   + T +  LC   +V
Sbjct: 488 FNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRV 539



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 18/340 (5%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D  + +F ++   GL P++  Y  LI+  CK+G+V    + F +++   +          
Sbjct: 447 DEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVY---------- 496

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
             GLC   +  +A  L  ++   G   +V+ +NTL+  LCR G  + A  L + M     
Sbjct: 497 --GLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML---- 550

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            +GV  +P+ ++Y+ ++DG C  G  D+A +L   M    L PN  TY +L+HG+C A  
Sbjct: 551 RVGV--RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            ++A  LL EM+  G  P+VV+ N I++ L + G+   A  L   M+    + + +TYN 
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +++G C    ++   ++F S+ S G +    ++NI+I    K  + E+A+ L+  +   G
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYG 728

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + P V TY  +   L +    E    LF  M+ N  A ++
Sbjct: 729 LVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS 768



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 6/299 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+  D+  ++ L+   C+ G+V     +   +LR    P+V+++ +L+ G C   R  EA
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEA 577

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
           A L   + + G +PN  TYNTL++G C+      A +L +EM   NG       P+ VTY
Sbjct: 578 AKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLM-NGPT-----PDVVTY 631

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + I+ GL + G   +AKEL+L M       ++ TY  +++G C  N  +EA  +   +  
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+Q ++++ N+++  L K GK ++A  L   +    + P+  TY  + +     G +  
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +  LF +ME  G   +    N L+  +    ++  A +  ++L  K       T + L 
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 146/315 (46%), Gaps = 6/315 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  FN L+  L +         L + +  +G+ PD+ +Y+ L++  C  G+      +  
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PN  T+ +L+ G C   RI +A +L  ++   G  P+V+TYNT+++GL +TG
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L+  M N   +       +  TY+II++GLCK   VD+A ++F  +  + L  
Sbjct: 643 RFSEAKELYLNMINSRTQW------DMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQL 696

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++T+  +I          +A  L   +   G+ P+V +  +I   L K G ++    L 
Sbjct: 697 HIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLF 756

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    PN+   N L+  F   G I+R       ++      +  + ++LI+ Y + 
Sbjct: 757 SAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRG 816

Query: 311 KEVEEALSLYNELPF 325
           +  + A SL  +  F
Sbjct: 817 EYQQLAKSLPEKYRF 831



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 22/219 (10%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M+   P V ++N +L  L +   +     L+  + +     D+YTY+I++N  CK   V 
Sbjct: 621 MNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVD 680

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F +F  +       +++TF  +I  L    +  +A  LF  + A+G  P+V TY    
Sbjct: 681 EAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETY---- 736

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDK 175
                    ++A NL KE      E+GV+F         PN+   + ++      G + +
Sbjct: 737 --------CLIAENLIKE--GSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISR 786

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           A     ++  +N +    T + LI  +        AK L
Sbjct: 787 AGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSL 825


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/408 (34%), Positives = 220/408 (53%), Gaps = 32/408 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  LL  +AK K +D V++L K L  +G+  DLYT ++L+NCFC+  Q  L    
Sbjct: 69  PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++ TFTSLI G C  +RI EA ++  ++   G +P+V+ Y T+I+ LC+
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            GH   AL+LF +M N      VV                              KP+ +T
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +ID   KEG +  AKEL+ +M   ++ PN+ TYTSLI+G C     +EA+ +   M 
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+VV+   ++N  CK  K+++A ++   M Q  +  N  TY TL+ GF L GK N
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL---PFKGIKPTVVTYN 336
             +E+F  M S G   +  +YN+L++  C N +V +AL ++ ++      G+ P + TYN
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            L HGL    + E+AL +F +MQ  D+     TY   I G+C   +V+
Sbjct: 429 VLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 195/359 (54%), Gaps = 9/359 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L KN H D  LSLF ++ + G+ PD+  Y+ L+N  C  G+     ++
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+V+TF +LI     E ++++A  L+ ++      PN+ TY +LINGLC 
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCM 293

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M     E    F P+ V Y+ +I+G CK   V+ A ++F +M  + L
Sbjct: 294 EGRLDEARQMFYLM-----ETKGCF-PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N +TYT+LI GF      N A+ +   MV +GV PN+ + NV+++ LC NGK++ A  
Sbjct: 348 TGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALM 407

Query: 249 LLDLMVQCD---VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           + + M + +   V PN  TYN L+ G C  GK+ +   +F  M+         +Y I+I 
Sbjct: 408 IFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQ 467

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           G CK  +V++AL+L+  LP KG+KP VVTY T+  GLF       A  LF +M+ + V+
Sbjct: 468 GMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H+  +NEA  L   MV+    P+++    ++N + K  K D    L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              V  + +T N LM+ FC + +          +  +G + D F++  LING+C    +E
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+S+ N++   GIKP VV Y T+   L +    + AL LF +M+   +  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 375 DGLC 378
           +GLC
Sbjct: 219 NGLC 222



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 82/138 (59%), Gaps = 3/138 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI---GLFPDLYTYSILINCFCKMGQVSL 64
           PP + ++N+LL CL  N   +  L +F+ +      G+ P++ TY++L++  C  G++  
Sbjct: 383 PPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEK 442

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++FG + +      ++T+T +I+G+C   ++ +A  LF  L + G +PNV+TY T+I+
Sbjct: 443 ALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMIS 502

Query: 125 GLCRTGHTIVALNLFKEM 142
           GL R G  + A  LF++M
Sbjct: 503 GLFREGLMLEAHVLFRKM 520


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/382 (35%), Positives = 204/382 (53%), Gaps = 8/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+ CL K   +D  L L   +   G  PD+ TY+ LI+   K G++S  F +
Sbjct: 77  PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTL 136

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T+ SLI GL    R  +A  L  +++  GC P+V+TY++LI GL +
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T+ A  LF+EM           KP+++T++ ++D L K G VD A EL  +MK   +
Sbjct: 197 DGETVKAFKLFQEMKRRG------RKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY +LI GF    D  EA  LL EM   G +P+VV+ + ++  L K  ++D A +
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M +    P+  TYNTL++G    G +N    LF  M+S GC  D  +Y+ LI    
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VE A  L+ E+   GI+P + TY ++   L +  Q + A +LF EM+G  ++ D  
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           TY  F++ L      RF  AR+
Sbjct: 431 TYNAFLNSLGRGG--RFKEARK 450



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 199/391 (50%), Gaps = 11/391 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+  L +   ++  L +   + + G  P+L+TY+ L++C  K GQ      +
Sbjct: 42  PDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P+V T+  LI  L    R+ EA  LF +++  GC P+  TYN+LI GL +
Sbjct: 102 LAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGK 161

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G +  A+ L +EM            P+ +TYS +I GL K+G   KA +LF +MK    
Sbjct: 162 VGRSQKAMELLEEMERHG------CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR 215

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +T+T+L+     A   ++A  LL EM ++GV+P VV+ N ++    K G +  A  
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M +   +P+  TY+ L+ G     +++   ++   ME  GC  D  +YN LING  
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + +A  L++ +  KG  P VVTY+TL   L +  + E A  LF EM+   +  D  
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKGNS 394
           TY + I  L    QV      F+  R KG S
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 188/372 (50%), Gaps = 7/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V ++N LL  LAK    +    LF+ L +    PD+ +YS LIN   + G+    
Sbjct: 5   PSPN-VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAA 63

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN+ T+ +L+  L    +  EA  L  +++  GC P+V TYN LI+ 
Sbjct: 64  LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L + G    A  LF EM     E G V  P+T TY+ +I GL K G   KA EL  +M+ 
Sbjct: 124 LGKAGRLSEAFTLFAEMR----ERGCV--PDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+V+TY+SLI G     +  +A  L  EM  +G +P+ ++   +M+ L K G++D+
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LLD M +  V+P   TYN L+ GF   G +     L   M+  GCK D  +Y+ LI 
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLIT 297

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G  K  +++EA  +  ++  +G  P  +TYNTL +GL +      A +LF  M+      
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357

Query: 366 DTCTYRTFIDGL 377
           D  TY T I  L
Sbjct: 358 DVVTYSTLITAL 369



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 6/362 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K       + L + +   G  PD+ TYS LI    K G+    F +
Sbjct: 147 PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKL 206

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P+ +TFT+L+  L    R+ +A  L  ++K  G +P V+TYN LI G  +
Sbjct: 207 FQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGK 266

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A NL  EM   NG      KP+ VTYS +I GL K   +D+A ++  +M+ E  
Sbjct: 267 VGDLVEAYNLLDEMKR-NG-----CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY +LI+G   A   N+A  L   M  +G  P+VV+ + ++  L K  ++++A  
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    ++P+ FTY +++      G+++    LF  M   G   D  +YN  +N   
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    +EA  ++ ++   G+ P V TY+ L  GL + ++ + A  L  E+     A D+ 
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500

Query: 369 TY 370
            +
Sbjct: 501 KF 502



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 179/381 (46%), Gaps = 6/381 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
             H  PP V +++ L+  L K+        LF+ +   G  PD  T++ L++   K G+V
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +   +      P VVT+ +LI G      +VEA  L  ++K  GC+P+V+TY+ L
Sbjct: 236 DDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL 295

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GL +      A  + K+M            P+T+TY+ +I+GL K G ++ A  LF +
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEG------CPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK +  NP+VVTY++LI     A     A  L  EM   G+QP++ +   I+  L K G+
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A RL   M    + P+  TYN  ++     G+    +++F  M+  G   D  +Y+ 
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G  K KEV++A  L  EL  +G     + ++     L      + A +L        
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +     +Y   ID L    +V
Sbjct: 530 LWPGASSYNALIDALAKAGRV 550



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 181/401 (45%), Gaps = 41/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  L K    D  L L   +   G+ P + TY+ LI  F K+G +   + +
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+   P+VVT++ LI GL   S++ EA  +  K++  GC P+ ITYNTLINGL +
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK 336

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  M +          P+ VTYS +I  L K   V+ A  LF +M+   +
Sbjct: 337 AGLLNDAGRLFDRMKSKG------CNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY S+I     A   ++A  L  EM  +G+ P+V++ N  +N L + G+   A +
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF---------- 298
           + + M +  + P+  TY+ L+ G   T +++    L   +   GC  D            
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510

Query: 299 -------------------------SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                                    SYN LI+   K   V EA +   +L  +G KP +V
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +Y++L   L +  Q + A +L  EM    +     +Y   +
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 153/306 (50%), Gaps = 6/306 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           +PNVVT+ SL+  L    +  EA  LF +LKA    P+V++Y+ LIN L R G    AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +  EM           KPN  TY+ ++D L K G  D+A  L  +M+     P+V TY  
Sbjct: 66  VVAEMQAKG------CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI     A   +EA  L  EM ++G  P+  + N ++  L K G+   A  LL+ M +  
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             P+  TY++L+ G    G+  +  +LF  M+  G K D  ++  L++   K   V++AL
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L +E+  +G+KP VVTYN L  G  ++     A  L  EM+ N    D  TY   I GL
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 378 CVRPQV 383
               Q+
Sbjct: 300 IKASQL 305



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 167/334 (50%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K    D    + K++   G  PD  TY+ LIN   K G ++    +
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+      P+VVT+++LI  L   +R+  A  LF ++++ G +P++ TY ++I  L +
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF EM  G G       P+ +TY+  ++ L + G   +A+++F  MK   L
Sbjct: 407 AGQVDDADRLFSEM-RGKG-----LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY +L+ G     + ++A GLL E+++QG   + +  +  +  L   G +D A  
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL       + P A +YN L+D     G+++        ++  G K D  SY+ LI+   
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +  +++ A  L  E+  +G+K +  +Y+ L   L
Sbjct: 581 QTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 6/297 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N L+  L K    +    LF R+ S G  PD+ TYS LI    K  +V    V
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P++ T+ S+I  L    ++ +A  LF++++  G  P+VITYN  +N L 
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    A  +F++M     E G++  P+  TY  ++ GL K   VD A  L  ++  + 
Sbjct: 441 RGGRFKEARKIFEDMK----ESGLL--PDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              + + +   +       + +EA  LL     +G+ P   S N +++ L K G++  A 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
             L+ + +   +P+  +Y++L+     TG+I+   EL   M   G K    SY+ L+
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 212/402 (52%), Gaps = 41/402 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L K         + + + +  +FPD   Y+ LI+ F K G VS+ + +
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P+ VT+TS+I GLC   ++VEA  LF+++ + G +P+ +TY  LI+G C+
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +L  +M     E G+   PN VTY+ ++DGLCK G VD A EL  +M  + L
Sbjct: 440 AGEMKEAFSLHNQMV----EKGLT--PNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEM------------------------------ 218
            PNV TY +LI+G C   +  +A  L+ EM                              
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHE 553

Query: 219 -----VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                +D+G+QP +V+ NV+MN  C +G +++  RL+  M+   + PNA T+N+LM  +C
Sbjct: 554 LLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYC 613

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M + G   D  +YNILI G+CK + ++EA  L+ E+  KG   T  
Sbjct: 614 IRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAA 673

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +YN+L  G ++ ++ E A KLF EM+ +   A+   Y  F+D
Sbjct: 674 SYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 197/371 (53%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+++++    + +    VL L + L   GL P+ YTY+ +I+  CK G+V     +
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V +T+LI G      +     LF ++K     P+ +TY ++I+GLC+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  LF EM +         KP+ VTY+ +IDG CK G + +A  L  QM  + L
Sbjct: 405 AGKVVEARKLFSEMLSKG------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTYT+L+ G C   + + A  LL EM ++G+QPNV + N ++N LCK G ++ A +
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M      P+  TY T+MD +C  G++ +  EL   M   G +    ++N+L+NG+C
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA-LKLFVEMQGNDVAADT 367
            +  +E+   L   +  KGI P   T+N+L    + IR   RA ++++  M    V  DT
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ-YCIRNNMRATIEIYKGMHAQGVVPDT 637

Query: 368 CTYRTFIDGLC 378
            TY   I G C
Sbjct: 638 NTYNILIKGHC 648



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 6/380 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NI+L  L +        SL  ++   G  PD+ +YS++++ +C++ Q+     +   +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            R    PN  T+ S+I  LC   R+VEA  +   +K     P+ + Y TLI+G  ++G+ 
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            V   LF EM            P+ VTY+ +I GLC+ G V +A++LF +M  + L P+ 
Sbjct: 374 SVEYKLFDEMKRKK------IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT+LI G+C A +  EA  L  +MV++G+ PNVV+   +++ LCK G++D A+ LL  
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++PN  TYN L++G C  G I +  +L   M+  G   D  +Y  +++ YCK  E
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + +A  L   +  KG++PT+VT+N L +G       E   +L   M    +  +  T+ +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 373 FIDGLCVRPQVRFTYARRKG 392
            +   C+R  +R T    KG
Sbjct: 608 LMKQYCIRNNMRATIEIYKG 627



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 161/322 (50%), Gaps = 6/322 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  + S GL PD  TY+ LI+ +CK G++   F +  +++     PNVVT+T+L+ GLC
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +  A  L  ++   G +PNV TYN LINGLC+ G+   A+ L +EM          
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG------ 527

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F P+T+TY+ I+D  CK G + KA EL   M  + L P +VT+  L++GFC +    + +
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+  M+D+G+ PN  + N +M + C    M     +   M    V P+  TYN L+ G 
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C    +     L   M   G      SYN LI G+ K K+ EEA  L+ E+   G     
Sbjct: 648 CKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEK 707

Query: 333 VTYNTLFHGLFEIRQAERALKL 354
             Y+      +E    E  L+L
Sbjct: 708 EIYDIFVDVNYEEGNWENTLEL 729



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 159/303 (52%), Gaps = 7/303 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VA 135
           +  + + F    + L     ++EA  LF KL  +G   +V + N  +  L  +   I  A
Sbjct: 177 WGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTA 236

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             +F+E +    E+GV +  NTV+Y+II+  LC+ G V +A  L +QM++    P+VV+Y
Sbjct: 237 FRVFREYS----EVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSY 290

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           + ++ G+C      +   L+ E+  +G++PN  + N I++ LCK G++  A ++L +M  
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + P+   Y TL+ GF  +G ++   +LF  M+      D  +Y  +I+G C+  +V E
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L++E+  KG+KP  VTY  L  G  +  + + A  L  +M    +  +  TY   +D
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 376 GLC 378
           GLC
Sbjct: 471 GLC 473



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K  + +  + L + ++  G FPD  TY+ +++ +CKMG+++    +
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P +VTF  L+ G C    + +   L   +   G  PN  T+N+L+   C 
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +    + ++K    G    GVV  P+T TY+I+I G CK   + +A  L  +M  +  
Sbjct: 615 RNNMRATIEIYK----GMHAQGVV--PDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +    +Y SLI GF     + EA+ L  EM   G        ++ ++   + G  +N   
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLE 728

Query: 249 LLDLMVQ 255
           L D  ++
Sbjct: 729 LCDEAIE 735


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+        +  V+ + K +++ GL PD +TY +L++  CK G+ +    +
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P+V  +  ++ G   +  + E  +    +   G  PN   +N +     +
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+++F +M            PN V Y+ +ID LCK G VD A+  F QM  E +
Sbjct: 392 KAMIGEAMDIFNKMRQQG------LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+V +TSL++G C  + W +A  L  EMV+QG+ PNVV  N IM  LC  G++  A R
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+DLM +   RP+  +YN L+ G CL GK +   +L   M S+G K ++ +YN L++GYC
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  +++A S++ E+   GI P VVTYNT+ HGLF+ R+   A +L++ M  +       
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 369 TYRTFIDGL 377
           TY   ++GL
Sbjct: 626 TYNIILNGL 634



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 211/423 (49%), Gaps = 55/423 (13%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHY------DTVLSLFKRLNS---IGLFPDLYTYSILINC 55
           H  P  + +FN LL  ++           + V+S F R+       + PD++TYSIL+ C
Sbjct: 44  HARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVAPDVFTYSILVGC 103

Query: 56  FCKMGQVSLGFVIFGRILRSCF-------------------------------------A 78
           FC+MG++  GF  FG IL++ +                                      
Sbjct: 104 FCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCT 163

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHTIVA 135
           PNVV++ +L+KG C E+R  EA  L   +   +   C PN+++YNT+ING    G    A
Sbjct: 164 PNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA 223

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            NLF +MT+          PN VTY+I+IDGLCK   VD+A+ +F QM  + + PN+VTY
Sbjct: 224 YNLFLDMTDQG------IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY 277

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           T LIHG+     W E   +L EM   G++P+  +  ++++ LCK GK   A +L D M++
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             ++P+   Y  ++ G+   G ++ +      M   G   + + +NI+   + K   + E
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A+ ++N++  +G+ P VV Y TL   L ++ + + A   F +M    VA +   + + + 
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVY 457

Query: 376 GLC 378
           GLC
Sbjct: 458 GLC 460



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNI+    AK       + +F ++   GL P++  Y+ LI+  CK+G+V    + F +++
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               APN+V FTSL+ GLC   +  +A  LF ++   G  PNV+ +NT++  LC  G  +
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M        V  +P+ ++Y+ +I G C  G  D+A +L   M    L PN  
Sbjct: 502 KAQRLIDLMER------VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L+HG+C     ++A  +  EM+  G+ P VV+ N I++ L K  +   A  L   M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +    + + +TYN +++G      ++   ++F S+ S   + D  ++NI+I    K+   
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A++L+  +   G+ P V TY  +   L E    E    +F EM+ +  A ++      
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735

Query: 374 IDGLCVRPQV 383
           +  L +R  +
Sbjct: 736 VRRLLLRGDI 745



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 187/442 (42%), Gaps = 79/442 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSLG 65
           P V S+N LL         +  L L   +    +    P+L +Y+ +IN F   GQV   
Sbjct: 164 PNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA 223

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F  +      PNVVT+T +I GLC    +  A  +F ++   G  PN++TY  LI+G
Sbjct: 224 YNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHG 283

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G     + + KEM+          +P+  TY +++D LCK+G   +A++LF  M  
Sbjct: 284 YLSIGQWKEVVRMLKEMSAHG------LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-------------------------- 219
           + + P+V  Y  ++HG+      +E    L  MV                          
Sbjct: 338 KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGE 397

Query: 220 ---------DQGVQPNVVSSNVIMNELCKNGKMDNAS----------------------- 247
                     QG+ PNVV+   +++ LCK G++D+A                        
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVY 457

Query: 248 ------------RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
                        L   MV   + PN   +NT+M   C  G++ + + L   ME +G + 
Sbjct: 458 GLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  SYN LI G+C   + +EA  L + +   G+KP   TYNTL HG     + + A  +F
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            EM  N +     TY T + GL
Sbjct: 578 QEMLSNGITPVVVTYNTILHGL 599



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 175/386 (45%), Gaps = 6/386 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
            +   PP + S+N ++         D   +LF  +   G+ P++ TY+I+I+  CK   V
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F +++     PN+VT+T LI G  +  +  E   +  ++ A G EP+  TY  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++ LC+ G    A  LF  M           KP+   Y II+ G   +G + +       
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKG------IKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M    ++PN   +  +   F       EA  +  +M  QG+ PNVV+   +++ LCK G+
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A    + M+   V PN   + +L+ G C   K  +  ELF  M + G   +   +N 
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           ++   C    V +A  L + +   G +P +++YN L  G   + + + A KL   M    
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTYA 388
           +  + CTY T + G C   ++   Y+
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYS 575



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 8/297 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  L+  L     ++    LF  + + G+ P++  ++ ++   C  G+V     +
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+++++ +LI+G C   +  EA+ L   + + G +PN  TYNTL++G CR
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A ++F+EM +NG         P  VTY+ I+ GL K     +AKEL+L M    
Sbjct: 567 DGRIDDAYSVFQEMLSNG-------ITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              ++ TY  +++G    N  +EA  +   +  + +Q ++++ N+++  L K+G+ ++A 
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAM 679

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            L   +    + P+  TY  + +     G +     +F  ME  GC  +    N L+
Sbjct: 680 NLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLV 736



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 8/317 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN ++  L           L   +  +G  PD+ +Y+ LI   C +G+      +
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ +L+ G C + RI +A ++F ++ + G  P V+TYNT+++GL +
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFK 601

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A  L+  M     +  +       TY+II++GL K   VD+A ++F  +  ++L
Sbjct: 602 TRRFSEAKELYLNMITSGKQWSIY------TYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +++T+  +I          +A  L   +   G+ P+V +  +I   L + G ++    
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +    PN+   N L+    L G I+R       ++      +  + ++LI+ + 
Sbjct: 716 MFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLF- 774

Query: 309 KNKEVEEALSLYNELPF 325
            ++E  +A SL  +  F
Sbjct: 775 -SREEHQAKSLPEKYHF 790



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 41/166 (24%)

Query: 258 VRPNAFTYNTLMDGFCLTGKIN---------------------------------RVKE- 283
           V P+ FTY+ L+  FC  G++                                  RV E 
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 284 ---LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK---PTVVTYNT 337
              L   M  +GC  +  SYN L+ G+C     EEAL L + +    ++   P +V+YNT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + +G F   Q ++A  LF++M    +  +  TY   IDGLC + QV
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLC-KAQV 254


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 202/363 (55%), Gaps = 12/363 (3%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K +    +L +   L   G  PD+ TY+++I+ +CK G+++    +  R+     +P+
Sbjct: 150 LGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VVT+ ++++ LC   ++ +A  +  ++    C P+VITY  LI   CR      A+ L  
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           EM +          P+ VTY+++++G+CKEG +D+A +    M      PNV+T+  ++ 
Sbjct: 264 EMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
             C    W +A+ LL +M+ +G  P+VV+ N+++N LC+ G +  A  +L+ M Q   +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N+ +YN L+ GFC   K++R  E    M S GC  D  +YN ++   CK+ +VE+A+ + 
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           N+L  KG  P ++TYNT+  GL +  +  +A+KL  EM+  D+  DT TY + + GL   
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 381 PQV 383
            +V
Sbjct: 498 GKV 500



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 192/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R+     +PD+ TY+ILI   C+   V     +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+  L+ G+C E R+ EA      + + GC+PNVIT+N ++  +C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M          F P+ VT++I+I+ LC++G + +A ++  +M     
Sbjct: 322 TGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK+++A  
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK  +  +L   M +   K D  +Y+ L+ G  
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA+  ++E    GI+P  VT+N++  GL + RQ +RA+   V M       +  
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555

Query: 369 TYRTFIDGL 377
           +Y   I+GL
Sbjct: 556 SYTILIEGL 564



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 196/375 (52%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++    K    +  LS+  R++   + PD+ TY+ ++   C  G++     +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R+L R C+ P+V+T+T LI+  C +S +  A  L  +++  GC P+V+TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+    +M +         +PN +T++II+  +C  G    A++L   M  + 
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+VVT+  LI+  C       A  +L +M   G QPN +S N +++  CK  KMD A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L+ MV     P+  TYNT++   C  GK+    E+   + S GC     +YN +I+G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +  +A+ L +E+  K +KP  +TY++L  GL    + + A+K F E +   +  + 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 368 CTYRTFIDGLCVRPQ 382
            T+ + + GLC   Q
Sbjct: 520 VTFNSIMLGLCKSRQ 534



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 17/360 (4%)

Query: 24  NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
           N HY +V S F          D+ + + L     + G++  GF     ++     P+++ 
Sbjct: 88  NGHYSSVNSSFA-------LEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
            T+LI+G C   +  +AA +   L+  G  P+VITYN +I+G C+ G    AL++   M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      P+ VTY+ I+  LC  G + +A E+  +M   +  P+V+TYT LI   C
Sbjct: 200 ---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             +    A  LL EM D+G  P+VV+ NV++N +CK G++D A + L+ M     +PN  
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T+N ++   C TG+    ++L   M   G      ++NILIN  C+   +  A+ +  ++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           P  G +P  ++YN L HG  + ++ +RA++    M       D  TY T +  LC   +V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+    ++      + L   +   G  PD+ TY++L+N  CK G++      
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   PNV+T   +++ +C+  R ++A  L   +   G  P+V+T+N LIN LCR
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++ ++M           +PN+++Y+ ++ G CKE  +D+A E   +M     
Sbjct: 357 KGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +++   C      +A  +L ++  +G  P +++ N +++ L K GK   A +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M   D++P+  TY++L+ G    GK++   + F   E MG + +  ++N ++ G C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+++ + A+     +  +G KP   +Y  L  GL     A+ AL+L  E+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+      +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR  F+P+VVTF  LI  LC +  +  A  +  K+   GC+PN ++YN L++G C+
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+   + M +          P+ VTY+ ++  LCK+G V+ A E+  Q+  +  
Sbjct: 392 EKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P ++TY ++I G   A    +A  LL EM  + ++P+ ++ + ++  L + GK+D A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                 +  +RPNA T+N++M G C + + +R  +  V M + GCK ++ SY ILI G  
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565

Query: 309 KNKEVEEALSLYNELPFKGI 328
                +EAL L NEL  KG+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 24/256 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+  L +       + + +++   G  P+  +Y+ L++ FCK  ++      
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R++ R C+ P++VT+ +++  LC + ++ +A  +  +L + GC P +ITYNT+I+GL 
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A+ L  EM   +       KP+T+TYS ++ GL +EG VD+A + F + +   
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI-------------- 233
           + PN VT+ S++ G C +   + A   L+ M+++G +PN  S  ++              
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574

Query: 234 --MNELCKNGKMDNAS 247
             +NELC  G M  +S
Sbjct: 575 ELLNELCNKGLMKKSS 590



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 6/228 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    K K  D  +   +R+ S G +PD+ TY+ ++   CK G+V  
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++     +P ++T+ ++I GL    +  +A  L  +++A   +P+ ITY++L+ 
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+  F E       +G+  +PN VT++ I+ GLCK    D+A +  + M 
Sbjct: 493 GLSREGKVDEAIKFFHEFE----RMGI--RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
                PN  +YT LI G  +     EA  LL E+ ++G+     +  V
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 6/239 (2%)

Query: 143 TNGNGEIGVV---FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +NGNG    V   F    V  +  +  + + G +++  +    M Y    P+++  T+LI
Sbjct: 85  SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            GFC      +A  +L  +   G  P+V++ NV+++  CK G+++NA  +LD M    V 
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  TYNT++   C +GK+ +  E+   M    C  D  +Y ILI   C++  V  A+ L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +E+  +G  P VVTYN L +G+ +  + + A+K   +M  +    +  T+   +  +C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 201/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L +  H    L +   +   G  PD++TY+ LI   CK+G+V     I
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++   F+PN VT+ +LI  LC E+++ EA  L   L + G  P+V T+N+LI GLC 
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +  +A+ LF+EM            P+  TY+++ID LC  G +++A  L  +M+    
Sbjct: 434 TNNHRLAMELFEEMKTKGCH------PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + NVVTY +LI GFC      EA+ +  EM  QG+  NVV+ N +++ LCKN +++ A++
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   ++P+ FTYN+L+  FC  G I +  ++  +M S GC+ D  +Y  LI G  
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VE A  L   +  KG+     TYN +   LF  ++   A++LF EM       D  
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 668 TYKVVFRGLC 677



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FNIL+  L +       + + + + S GL PD  T++ L+  F + G ++    I
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ +    + VT   L+ G C E RI E  +   ++   G  P+  T+N+L+NGLCR
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL +   M          F P+  TY+ +I GLCK G V++A E+  QM   + 
Sbjct: 329 IGHVKHALEILDVMLQEG------FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF 382

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN VTY +LI   C  N   EA  L   +  +G+ P+V + N ++  LC       A  
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME 442

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+ FTYN L+D  C  G++     L   MES GC  +  +YN LI+G+C
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK +EEA  +++E+  +GI   VVTYNTL  GL + R+ E A +L  +M    +  D  
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562

Query: 369 TYRTFIDGLC 378
           TY + +   C
Sbjct: 563 TYNSLLTYFC 572



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 198/366 (54%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL  L        V  +  R+ S G+ PD+ T++ILI   C+  Q+    ++   +
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +P+  TFT+L++G   E  +  A  +  ++ A GC  + +T N L++G C+ G  
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
              L+   EM+N        F+P+  T++ +++GLC+ G V  A E+   M  E  +P++
Sbjct: 298 EEVLSFIDEMSNEG------FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY SLI G C   +  EA  +L +M+ +   PN V+ N +++ LCK  +++ A+ L  +
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +    + P+  T+N+L+ G CLT       ELF  M++ GC  D+F+YN+LI+  C    
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +EEALSL  E+   G    VVTYNTL  G  + ++ E A ++F EM+   ++ +  TY T
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531

Query: 373 FIDGLC 378
            IDGLC
Sbjct: 532 LIDGLC 537



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K    +    L + L S G+ PD+ T++ LI   C      L   +
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T+  LI  LC+  R+ EA +L  ++++ GC  NV+TYNTLI+G C+
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F EM     E+  + + N VTY+ +IDGLCK   V++A +L  QM  E L
Sbjct: 504 NKRIEEAEEIFDEM-----ELQGISR-NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY SL+  FC A D  +A  ++  M   G +P+ V+   ++  L K G+++ ASR
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +     TYN ++       + +    LF  M   G   D  +Y ++  G C
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLC 677

Query: 309 KNK-EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
                + EA+    E+  KG  P   ++  L  GL  +   +  +KL
Sbjct: 678 SGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKL 724



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 161/351 (45%), Gaps = 21/351 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L    ++   + LF+ + + G  PD +TY++LI+  C  G++     +
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  + NVVT+ +LI G C   RI EA  +F +++  G   NV+TYNTLI+GLC+
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCK 538

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  +M           KP+  TY+ ++   C+ G + KA ++   M     
Sbjct: 539 NRRVEEAAQLMDQMLMEG------LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +LI G   A     A  LL  +  +G+     + N ++  L +  +   A R
Sbjct: 593 EPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVR 652

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCL-TGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           L   M++    P+A TY  +  G C   G I    +  V M   G   D  S+ +L  G 
Sbjct: 653 LFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYN------TLFHGLFEIRQAERAL 352
           C       ALS+ + L  K +   +   N      ++  G  +IR+ + AL
Sbjct: 713 C-------ALSMEDTL-IKLVNRVMKQANFSDSEVSMIMGFLKIRKFQDAL 755



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 30/333 (9%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR---TGHTI 133
           F P+ V +  +++ L  +        +  ++K  GCE    T+  LI    +       +
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 134 VALNLFKE-----------------MTNGNG----------EIGVVFKPNTVTYSIIIDG 166
             +++ +E                 + +GN            +    KP+  T++I+I  
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC+   +  A  +  +M    L+P+  T+T+L+ GF    + N A  +  +MV  G   +
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            V+ NV+++  CK G+++     +D M     RP+ FT+N+L++G C  G +    E+  
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   G   D F+YN LI G CK  EVEEA+ + N++  +   P  VTYNTL   L +  
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           Q E A +L   +    +  D CT+ + I GLC+
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 211/387 (54%), Gaps = 7/387 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   HP P  V  F+ LL  +AK   Y+ V+SLF+ L  +G+  DLY+++ LI+CFC+  
Sbjct: 70  MAESHPLPSIVD-FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++SL     G++++  F P++VTF SL+ G C  +R  EA +L  ++   G EPNV+ YN
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+I+ LC  G    AL++ K M     ++G+  +P+ VTY+ +I  L   G    +  + 
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    ++P+V+T+++LI  +       EAK    EM+ + V PN+V+ N ++N LC +
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D A ++L+++V     PNA TYNTL++G+C   +++   ++   M   G   D F+Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N L  GYC+  +   A  +   +   G+ P + T+N L  GL +  +  +AL    ++Q 
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +       TY   I GLC   +V   +
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAW 449



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L +    +T L + K +  +G+ PD+ TY+ LI      G   +   I
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R   +P+V+TF++LI     E +++EA   + ++      PN++TYN+LINGLC 
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L+  K++ N     G  F PN VTY+ +I+G CK   VD   ++   M  + +
Sbjct: 302 HG----LLDEAKKVLNVLVSKG--FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +  TY +L  G+C A  ++ A+ +L  MV  GV P++ + N++++ LC +GK+  A  
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ + +        TYN ++ G C   K+     LF S+   G   D  +Y  ++ G  
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 309 KNKEVEEALSLYNEL 323
           + +   EA  LY ++
Sbjct: 476 RKRLWREAHELYRKM 490



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 69/135 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L     +   +     +  R+ S G+ PD+YT++IL++  C  G++    V    +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +S     ++T+  +IKGLC   ++ +A  LF  L   G  P+VITY T++ GL R    
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480

Query: 133 IVALNLFKEMTNGNG 147
             A  L+++M   +G
Sbjct: 481 REAHELYRKMQKEDG 495



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y   +    H+  +N+A  L  +M +    P++V  + ++  + K  K +    L   + 
Sbjct: 47  YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              +  + +++ TL+D FC   +++        M  +G +    ++  L+NG+C      
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+SL +++   G +P VV YNT+   L E  Q   AL +   M+   +  D  TY + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226

Query: 375 DGL 377
             L
Sbjct: 227 TRL 229



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%)

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K ++A  L   M +    P+   ++ L+       K   V  LF  +E +G  HD +S+ 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+ +C+   +  ALS   ++   G +P++VT+ +L +G   + +   A+ L  ++ G 
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
               +   Y T ID LC + QV
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQV 200


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 209/391 (53%), Gaps = 29/391 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L KN        L + +   G+FPD   Y+ +I+ FCK+G VS    +F  + 
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    P++VT+TS+I G+C   ++VEA  +F ++   G EP+ +TY  LI+G C+ G   
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 134 VALNLFKEMTNG------------------NGEIGVV-----------FKPNTVTYSIII 164
            A ++  +M                     NGEI V             +PN  TY+ I+
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +GLCK G +++  +L  +M      P+ +TYT+L+  +C   +  +A  LL  M+++ +Q
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P +V+ NV+MN  C +G +++  RL++ M++  + PNA T+N+LM  +C+   +    E+
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           + +M   G   D  +YNILI G+CK + ++EA  L+ E+  KG   T  TY+ L  G ++
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYK 674

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFID 375
            ++   A KLF EM+ + + A+   Y  F+D
Sbjct: 675 RKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 201/374 (53%), Gaps = 6/374 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S NI+L CL +        +L  ++   G FPD+ +Y ++++ +C++G++     +   +
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P+   + ++I  LC    +VEA  L   ++ +G  P+ + Y T+I+G C+ G+ 
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF EM            P+ VTY+ +I G+CK G + +A+E+F +M  + L P+ 
Sbjct: 364 SAACKLFDEMRRKK------IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDE 417

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT+LI G+C A +  EA  +  +MV +G+ PNVV+   + + LCKNG++D A+ LL  
Sbjct: 418 VTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHE 477

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++PN +TYNT+++G C  G I +  +L   M+  G   D  +Y  L++ YCK  E
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + +A  L   +  K ++PT+VT+N L +G       E   +L   M    +  +  T+ +
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597

Query: 373 FIDGLCVRPQVRFT 386
            +   C++  +R T
Sbjct: 598 LMKQYCIKNNMRAT 611



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 156/344 (45%), Gaps = 29/344 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++  + K+        +F  +   GL PD  TY+ LI+ +CK G++   F +
Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV 439

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    PNVVT+T+L  GLC    I  A  L  ++   G +PNV TYNT++NGLC+
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVV-----------FKPNTVT 159
            G+    + L +EM                      GE+               +P  VT
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++++G C  G ++  + L   M  + + PN  T+ SL+  +C  N+      +   M 
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+GV P+  + N+++   CK   M  A  L   MV+      A TY+ L+ GF    K  
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
             ++LF  M   G   +   Y+I ++   +    E  L L +E 
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 182/375 (48%), Gaps = 47/375 (12%)

Query: 45  DLYTYSILINCFCKMGQ--VSLGFVIFGRILRSCF---APNVVTFTSLIKGLCAESRIVE 99
           D+ T   L+  FC   +  VS  F +F  +L   +     + + F    + L     ++E
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLE 189

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGL-CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           A  LF KL  +G   +V + N  ++ L C      +A+ +F+E      E+GV +  NTV
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCW--NTV 243

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           + +I++  LC+ G V +A  L +QM      P+VV+Y  ++ G+C   + ++   L+ E+
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF------ 272
             +G++P+    N I+  LCKNG++  A +LL  M +  V P+   Y T++ GF      
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 273 -----------------------------CLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                                        C +GK+   +E+F  M   G + D+ +Y  L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+GYCK  E++EA S++N++  KG+ P VVTY  L  GL +  + + A +L  EM    +
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 364 AADTCTYRTFIDGLC 378
             +  TY T ++GLC
Sbjct: 484 QPNVYTYNTIVNGLC 498


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 218/410 (53%), Gaps = 44/410 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++ + P+    +S  +LL  + K+   + VL   + + S  + PD   Y+ LI+ F K+G
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V      F  +L    +P+ +T+T+LI+G     +++E   LF ++ + G +P+ +TY 
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+  C+ G  + A +L  EM     ++G+   PN VTY  +IDGLCK G +D A EL 
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMV----QMGMT--PNIVTYGALIDGLCKHGELDTANELL 491

Query: 181 LQMKYENL-----------------------------------NPNVVTYTSLIHGFCHA 205
            +M+ + L                                   +P+ +TYT++I  +C  
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A  LL EM+D+G+QP VV+ NV+MN  C  G +++  RLL  M++  + P+A TY
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           NTLM   C+   +N   +++  M + G   D  +YNILI G+CK + ++EA  LY E+  
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           KG  PTV +YN L    ++ R+   A +LF EM+G+ + AD   Y  F+D
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 8/386 (2%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +S+NI++  L +         L  +++     PD+ +YS +I+ +C +G++     +   
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +      PN  T+ S+I  LC   +  EA  +  ++ +    P+ + Y TLI+G  + GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A   F EM +          P+ +TY+ +I G  + G V + + LF +M    L P+
Sbjct: 379 VRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTYT+LI  +C A +   A  L  EMV  G+ PN+V+   +++ LCK+G++D A+ LLD
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  ++ N   YN++++G C  G I +  +L   ME  G   D  +Y  +I+ YC+  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++++A  L  E+  +G++PTVVT+N L +G   +   E   +L   M    +  D  TY 
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 372 TFIDGLCVRPQVRFTYA--RRKGNSG 395
           T +   C+R  +  T    +R  N G
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQG 638



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 164/338 (48%), Gaps = 45/338 (13%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VA 135
           + PN + F    + L     + EA  L  KL ++G    V + N  ++ +      I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + +F        E G+ +  NT +Y+III  LC+ G V +A  L +QM + +  P+VV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL----- 250
           +++I G+CH  +  +A  L+ +M  +G++PN  + N I+  LCK GK   A ++L     
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 251 ------------------------------DLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                                         D M+   + P+  TY TL+ GF   GK+  
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + LF  M S G K D+ +Y  LI+ YCK  E+  A SL+NE+   G+ P +VTY  L  
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  + + A +L  EM+   +  + C Y + ++G+C
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 29/320 (9%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           +LF  + S GL PD  TY+ LI+ +CK G++   F +   +++    PN+VT+ +LI GL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN----- 146
           C    +  A  L  +++  G + NV  YN+++NG+C+ G+   A+ L KEM         
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 147 -------------GEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
                        G+I    K           P  VT++++++G C  G ++    L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + P+ +TY +L+   C  N  N    +   M +QGV P+  + N+++   CK   
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  L   M++    P   +YN L+  F    K    +ELF  M   G   D   YN 
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718

Query: 303 LINGYCKNKEVEEALSLYNE 322
            ++   +  +VE  L+L +E
Sbjct: 719 FVDMCYEEGDVEITLNLCDE 738



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 2/200 (1%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y+   PN + +             +EA+ LL +++  G+   V S N  ++ +  N   +
Sbjct: 183 YKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--E 240

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                + +  +  +  N  +YN ++   C  GK+     L + M+      D  SY+ +I
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GYC   E+++AL L +++  KG+KP   TYN++   L +I ++  A K+  EM    + 
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            D   Y T I G      VR
Sbjct: 361 PDNVVYTTLIHGFFKLGHVR 380


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/270 (43%), Positives = 169/270 (62%), Gaps = 6/270 (2%)

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
           A G +P+V TY T+INGLC+ G T+ A  LFK+M    GE G   +P+ VTYS IID LC
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAGC--QPDVVTYSTIIDSLC 56

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           K+  V++A ++F  MK + ++PN+ TY SLI G C+ + W EA  +L EM+   + PN+V
Sbjct: 57  KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 116

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + ++++N  CK G +  A  +L  M +  V PN  TY++LM+G+ L  ++   ++LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            + GCK D FSYNILINGYCK K + EA  L+NE+  +G+ P +V+YNTL  GL ++ + 
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             A  LF  M  N    D CTY   +DG C
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFC 266



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K         LFK++   G  PD+ TYS +I+  CK  +V+    I
Sbjct: 8   PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PN+ T+ SLI+GLC  SR  EA+A+  ++ +    PN++T++ LIN  C+
Sbjct: 68  FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + K MT    E+GV  +PN VTYS +++G   +  V +A++LF  M  +  
Sbjct: 128 EGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V +Y  LI+G+C A    EAK L  EM+ QG+ P++VS N +++ LC+ G++  A  
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 241

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+     P+  TY+ L+DGFC  G + +   LF +M+S   K +   YNILI+  C
Sbjct: 242 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 301

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           K++ ++EA  L++EL  +G++P +  +      LFEI +   AL++
Sbjct: 302 KSRNLKEARKLFSELFVQGLQPNMKHWK-----LFEIWKRMAALRM 342



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 184/318 (57%), Gaps = 6/318 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD++TY+ +IN  CK+G+      +F ++  +   P+VVT++++I  LC + R+ EA
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +F+ +KA G  PN+ TYN+LI GLC       A  +  EM + N        PN VT+
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIVTF 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S++I+  CKEG V +A+ +   M    + PNVVTY+SL++G+    +  EA+ L   M+ 
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G +P+V S N+++N  CK  ++  A +L + M+   + P+  +YNTL+DG C  G++  
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +LF +M + G   D  +Y+IL++G+CK   + +A  L+  +    +KP +V YN L  
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 341 GLFEIRQAERALKLFVEM 358
            + + R  + A KLF E+
Sbjct: 299 AMCKSRNLKEARKLFSEL 316



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 162/302 (53%), Gaps = 6/302 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           + P+V T+T++I GLC     V AA LF K+   GC+P+V+TY+T+I+ LC+      AL
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           ++F  M            PN  TY+ +I GLC      +A  +  +M   N+ PN+VT++
Sbjct: 66  DIFSYMKAKG------ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LI+ FC   +  EA+G+L  M + GV+PNVV+ + +MN      ++  A +L D+M+  
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +P+ F+YN L++G+C   +I   K+LF  M   G   D  SYN LI+G C+   + EA
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L+  +   G  P + TY+ L  G  +     +A +LF  MQ   +  +   Y   ID 
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 377 LC 378
           +C
Sbjct: 300 MC 301



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 6/169 (3%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV +G QP+V +   I+N LCK G+   A+ L   M +   +P+  TY+T++D  C   +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N   ++F  M++ G   + F+YN LI G C      EA ++ NE+    I P +VT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 338 LFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +   +   + +A   LK   EM    V  +  TY + ++G  ++ +V
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAEV 166


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 198/351 (56%), Gaps = 9/351 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           + + L   G  PD+ TY+++I+ +CK G+++    +  R+     +P+VVT+ ++++ LC
Sbjct: 159 ILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              ++ +A  +  ++    C P+VITY  LI   CR      A+ L  EM +        
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG------ 269

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+ VTY+++++G+CKEG +D+A +    M      PNV+T+  ++   C    W +A+
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL +M+ +G  P+VV+ N+++N LC+ G +  A  +L+ M +   +PN+ +YN L+ GF
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF 389

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K++R  E    M S GC  D  +YN ++   CK+ +VE+A+ + N+L  KG  P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +TYNT+  GL +  +  +A+KL  EM+  D+  DT TY + + GL    +V
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 191/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R+     +PD+ TY+ILI   C+   V     +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+  L+ G+C E R+ EA      + + GC+PNVIT+N ++  +C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M          F P+ VT++I+I+ LC++G + +A ++  +M     
Sbjct: 322 TGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK+++A  
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK  +  +L   M +   K D  +Y+ L+ G  
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA+  ++E    G++P  VT+N++  GL + RQ +RA+   V M          
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTET 555

Query: 369 TYRTFIDGL 377
           +Y   I+GL
Sbjct: 556 SYTILIEGL 564



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 197/375 (52%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++    K    +  LS+  R++   + PD+ TY+ ++   C  G++     +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R+L R C+ P+V+T+T LI+  C +S + +A  L  +++  GC P+V+TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+    +M +         +PN +T++II+  +C  G    A++L   M  + 
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+VVT+  LI+  C       A  +L +M   G QPN +S N +++  CK  KMD A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L+ MV     P+  TYNT++   C  GK+    E+   + S GC     +YN +I+G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +  +A+ L +E+  K +KP  +TY++L  GL    + + A+K F E +   V  + 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519

Query: 368 CTYRTFIDGLCVRPQ 382
            T+ + + GLC   Q
Sbjct: 520 VTFNSIMLGLCKTRQ 534



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 182/368 (49%), Gaps = 17/368 (4%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSIL--------INCFCKMGQVSLGFVIFG 70
           G   + + +DT+ S     N  G F    +  +L        +    + G++  GF    
Sbjct: 67  GLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLE 126

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+++  T+LI+G C   +  +AA +   L+  G  P+VITYN +I+G C+ G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG 186

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL++   M+           P+ VTY+ I+  LC  G + +A E+  +M   +  P
Sbjct: 187 EINNALSVLDRMS---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+TYT LI   C  +   +A  LL EM D+G  P+VV+ NV++N +CK G++D A + L
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M     +PN  T+N ++   C TG+    ++L   M   G      ++NILIN  C+ 
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +  A+ +  ++P  G +P  ++YN L HG  + ++ +RA++    M       D  TY
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417

Query: 371 RTFIDGLC 378
            T +  LC
Sbjct: 418 NTMLTALC 425



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+    ++      + L   +   G  PD+ TY++L+N  CK G++      
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   PNV+T   +++ +C+  R ++A  L   +   G  P+V+T+N LIN LCR
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++ ++M           +PN+++Y+ ++ G CKE  +D+A E   +M     
Sbjct: 357 KGLLGRAIDILEKMPKHG------CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +++   C      +A  +L ++  +G  P +++ N +++ L K GK   A +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M   D++P+  TY++L+ G    GK++   + F   E MG + +  ++N ++ G C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K ++ + A+     +  +G KPT  +Y  L  GL     A+ AL+L  E+
Sbjct: 531 KTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+      +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR  F+P+VVTF  LI  LC +  +  A  +  K+   GC+PN ++YN L++G C+
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+   + M +          P+ VTY+ ++  LCK+G V+ A E+  Q+  +  
Sbjct: 392 EKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P ++TY ++I G   A    +A  LL EM  + ++P+ ++ + ++  L + GK+D A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                 +  VRPNA T+N++M G C T + +R  +  V M + GCK  + SY ILI G  
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565

Query: 309 KNKEVEEALSLYNELPFKGI 328
                +EAL L NEL  KG+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 135/256 (52%), Gaps = 24/256 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+  L +       + + +++   G  P+  +Y+ L++ FCK  ++      
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R++ R C+ P++VT+ +++  LC + ++ +A  +  +L + GC P +ITYNT+I+GL 
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A+ L  EM   +       KP+T+TYS ++ GL +EG VD+A + F + +   
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI-------------- 233
           + PN VT+ S++ G C     + A   L+ M+++G +P   S  ++              
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL 574

Query: 234 --MNELCKNGKMDNAS 247
             +NELC  G M  +S
Sbjct: 575 ELLNELCNKGLMKRSS 590



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    K K  D  +   +R+ S G +PD+ TY+ ++   CK G+V  
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++     +P ++T+ ++I GL    +  +A  L  +++A   +P+ ITY++L+ 
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+  F E       +GV  +PN VT++ I+ GLCK    D+A +  + M 
Sbjct: 493 GLSREGKVDEAIKFFHEFE----RMGV--RPNAVTFNSIMLGLCKTRQTDRAIDFLVYMI 546

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
                P   +YT LI G  +     EA  LL E+ ++G+     +  V
Sbjct: 547 NRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 209/377 (55%), Gaps = 9/377 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S N LL  L K   +  V  ++K +    + P+L T++ +IN  CK+G+++    +  
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRI---VEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +    F PNVVT+ +LI G C   R+    +A A+  ++      PN +T+N LI+G C
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +  +   AL +F+EM +         KP  VTY+ +++GLC EG +++AK L  +M   N
Sbjct: 315 KDENLSAALKVFEEMQSQG------LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNV+TY +LI+G+C      EA+ L   +  QG+ PNV++ N +++  CK GKM+ A 
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L  +M++    PNA TYN L+ GFC  GK+  VK L   M+  G K D  +YNILI+ +
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ KE ++A  L +E+  KG+KP+ +TYN L +G         AL L  +M+     A+ 
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY   I G C + ++ 
Sbjct: 549 VTYNVLIQGYCRKGKLE 565



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 9/366 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FN ++  L K    +    +   +   G +P++ TY+ LI+ +CKMG+V   +  
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             I   ++ +  +PN VTF  LI G C +  +  A  +F ++++ G +P V+TYN+L+NG
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G    A  L  EM + N       KPN +TY+ +I+G CK+  +++A+ELF  +  
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSN------LKPNVITYNALINGYCKKKLLEEARELFDNIGK 401

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L PNV+T+ +L+HG+C      EA  L   M+++G  PN  + N ++   C+ GKM+ 
Sbjct: 402 QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE 461

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              LL+ M    V+ +  TYN L+  +C   +  +   L   M   G K    +YNIL+N
Sbjct: 462 VKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYC    +  AL+L  ++  +G    VVTYN L  G     + E A  L  EM    +  
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP 581

Query: 366 DTCTYR 371
           +  TY 
Sbjct: 582 NRTTYE 587



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 188/389 (48%), Gaps = 27/389 (6%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLN------SIGL-FPDLYTYS-----------ILINCFCK 58
           LL  LA  KHY  + S+           SI L F  L   S           +L+  + +
Sbjct: 113 LLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVE 172

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             +  LG   F R     +  +V++   L+  L  E+       ++ ++      PN+IT
Sbjct: 173 NSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLIT 232

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD---K 175
           +NT+INGLC+ G    A ++  +M          F PN VTY+ +IDG CK G V    K
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWG------FWPNVVTYNTLIDGYCKMGRVGKMYK 286

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A  +  +M    ++PN VT+  LI GFC   + + A  +  EM  QG++P VV+ N ++N
Sbjct: 287 ADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVN 346

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LC  GK++ A  LLD M+  +++PN  TYN L++G+C    +   +ELF ++   G   
Sbjct: 347 GLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTP 406

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  ++N L++GYCK  ++EEA  L   +  KG  P   TYN L  G     + E    L 
Sbjct: 407 NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLL 466

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            EMQ   V ADT TY   I   C + + +
Sbjct: 467 NEMQCRGVKADTVTYNILISAWCEKKEPK 495



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K K  +    LF  +   GL P++ T++ L++ +CK G++   F++
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L   F PN  T+  LI G C E ++ E   L  +++  G + + +TYN LI+  C 
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +         KP+ +TY+I+++G C EG +  A  L  QM+ E  
Sbjct: 491 KKEPKKAARLIDEMLDKG------LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             NVVTY  LI G+C      +A GLL EM+++G+ PN  +  +I  E+ + G
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 6/165 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+    +    + V +L   +   G+  D  TY+ILI+ +C+  +      +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+ +T+  L+ G C E  +  A  L  +++  G   NV+TYN LI G CR
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
            G    A  L  EM     E G++  PN  TY II + + ++GF+
Sbjct: 561 KGKLEDANGLLNEML----EKGLI--PNRTTYEIIKEEMMEKGFL 599


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/338 (37%), Positives = 185/338 (54%), Gaps = 7/338 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD  T + L+        +     +F  +       +  T+  LI GLC   +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  K+K   C+ +V TY  +I+ LC+ G T  AL++F EM      IG    P+ V Y
Sbjct: 132 IKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEM------IGAGILPDVVVY 184

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S ++DGLC+ G + +A E F +M+   ++ +V TY SLIHG   A  W E    L  MVD
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  P+  +  ++++ LCK GK+  A ++L+LM      P+  TYNTLM+G CL G++  
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +LF S+   G K + FSYNILINGYCK+++++EA  L+ E+  KG+KP+ VTYNTL  
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L +  +   A KLFVEMQ         TY   +DGLC
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 402



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 207/371 (55%), Gaps = 13/371 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
             ++ IL+  L K +     + L +++  N  G   D++TY ++I+  CK G  +    +
Sbjct: 112 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDSLCKDGMTTEALDM 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   P+VV ++SL+ GLC   R+ EA   F +++  G   +V TYN+LI+GL R
Sbjct: 169 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228

Query: 129 TGHTIVALNLFKEMTNG-NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G       L+KE+T   N  +   F P+  T++I+IDGLCKEG V +A+++   M ++ 
Sbjct: 229 AG-------LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+++TY +L++G C      +A  L   + D+G++ NV S N+++N  CK+ K+D A 
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAF 341

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL + M    ++P+  TYNTL+   C +G++   ++LFV M++ G      +Y +L++G 
Sbjct: 342 RLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGL 401

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN  +EEA+ L+  +     KP +  ++ L  G+    + E A K F E+  N +  DT
Sbjct: 402 CKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDT 461

Query: 368 CTYRTFIDGLC 378
             Y   I+GLC
Sbjct: 462 IAYNILINGLC 472



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 184/358 (51%), Gaps = 6/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ L+  L +       L  FK +   G+  D+YTY+ LI+   + G        
Sbjct: 179 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++   F+P+  TFT LI GLC E ++ EA  +   +   G EP+++TYNTL+NGLC 
Sbjct: 239 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF+ + +         K N  +Y+I+I+G CK+  +D+A  LF +M+ + L
Sbjct: 299 VGQLEDATKLFESLADRG------IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +LI   C +     A+ L +EM   G    + +  V+++ LCKNG ++ A  
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + + + +PN   ++ L+DG C  GK+    + F  +   G + D  +YNILING C
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
               + EA+ L  ++  KG  P  +T+N +   L +  +   A++L  EM+  + + D
Sbjct: 473 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F IL+  L K         + + ++  G  PD+ TY+ L+N  C +GQ+     +
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       NV ++  LI G C + +I EA  LF +++  G +P+ +TYNTLI  LC+
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  LF EM       G   K +T  Y +++DGLCK G +++A +LF  +K    
Sbjct: 369 SGRVRTAQKLFVEMQT----CGQFLKLST--YCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  ++ L+ G C A    EA     E+   G++P+ ++ N+++N LC  G +  A +
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           LL  M +    P++ T+N ++       +I+   +L   M +     D+   ++L+
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 141/269 (52%), Gaps = 6/269 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H     P + ++N L+  L      +    LF+ L   G+  ++++Y+ILIN +CK  
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F +F  +      P+ VT+ +LI  LC   R+  A  LF +++  G    + TY 
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L++GLC+ GH   A++LF+ +           KPN   +SI++DG+C+ G +++A + F
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTE------HKPNIEVFSILLDGMCRAGKLEEAWKQF 449

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++    L P+ + Y  LI+G C+    +EA  LL +M ++G  P+ ++ NVI+  L K 
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            ++  A +LL+ M   +  P+    + L+
Sbjct: 510 NEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 220/408 (53%), Gaps = 32/408 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  LL  +AK K +D V++L   L  +G+  DLYT ++L+NCFC+  Q  L    
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++VTFTSLI G C  +R+ EA ++  ++   G +P+V+ Y T+I+ LC+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            GH   AL+LF +M N      VV                              KP+ +T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +ID   KEG    A+EL+ +M   ++ PN+ TYTSLI+GFC     +EA+ +   M 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+VV+   ++N  CK  K+D+A ++   M Q  +  N  TY TL+ GF   GK N
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL---PFKGIKPTVVTYN 336
             +E+F  M S G   +  +YN+L++  C N +V++AL ++ ++      G+ P + TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            L HGL    + E+AL +F +M+  ++     TY   I G+C   +V+
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%)

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  ++    H+  +NEA  L   MV+    P+++    ++N + K  K D    L D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              V  + +T N LM+ FC + +          M  +G + D  ++  LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+S+ N++   GIKP VV Y T+   L +      AL LF +M+   +  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 375 DGLC 378
           +GLC
Sbjct: 220 NGLC 223



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI---GLFPDLYTYSILINCFCKMGQVSL 64
           PP + ++N+LL CL  N      L +F+ +      G+ P+++TY++L++  C  G++  
Sbjct: 384 PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  + +      ++T+T +I+G+C   ++  A  LF  L + G +PNV+TY T+I+
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503

Query: 125 GLCRTGHTIVALNLFKEM 142
           GL R G    A  LF++M
Sbjct: 504 GLFREGLKHEAHVLFRKM 521



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 4/157 (2%)

Query: 236 ELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           E+ +NG    + + A  L   MV+    P+   +  L++      K + V  L   ++ M
Sbjct: 42  EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G  HD ++ N+L+N +C++ +   A S   ++   G +P +VT+ +L +G     + E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           + +  +M    +  D   Y T ID LC    V +  +
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 203/385 (52%), Gaps = 14/385 (3%)

Query: 5   HPSPPPVSSFNILLGCLAK-------NKHYDTVLSLFKRLN---SIGLFPDLYTYSILIN 54
           H  P  V +FN LL  +++           + V+SLF R+    +I + PD  TYSILI 
Sbjct: 43  HARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIG 102

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCE 113
           CFC+MG++  GF  FG IL+S +  N +    L+KGLC   R+ EA  +  K +   GC 
Sbjct: 103 CFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCT 162

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+V++YNTL+ G C       AL L   M +  G       PN V+Y+I+I+G   EG V
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAIVINGFFTEGQV 219

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA  LFL+M    + PNVVTYT++I G C A   + A+G+  +M+D+GV+P+  + N +
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++     GK     R+L+ M    ++P+ +TY +L++  C  G+    + LF SM   G 
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGI 339

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K +   Y ILI+GY     + E   L N +   G+ P    +N +F    +    + A+ 
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +F +M+   ++ D   Y   ID LC
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALC 424



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+        +  V+ + + +++ GL PD YTY  L+N  C  G+      +
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    PNV  +  LI G   +  + E   L   +   G  P+   +N +     +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+++F +M            P+ V Y  +ID LCK G VD A   F QM  E +
Sbjct: 391 KAMIDEAMHIFNKMKQQG------LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  + SL++G C  + W +AK    EM++QG++P+VV  N I+  LC  G++  A R
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+DLM +   RP   +Y TL+ G CL G+I+   +    M S+G K D+++YN L++GYC
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   +++A  ++ E+   GI P VVTY+T+ HGLF  R+   A +L++ M  +    +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 369 TYRTFIDGL 377
            Y   ++GL
Sbjct: 625 IYNIILNGL 633



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 170/362 (46%), Gaps = 41/362 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI+    AK    D  + +F ++   GL PD+  Y  LI+  CK+G+V    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    APN+  F SL+ GLC   +  +A   + ++   G  P+V+ +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M        V  +P  ++Y+ +I G C  G +D+A +    M    L
Sbjct: 496 KGQVMKAQRLIDLMER------VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +L+HG+C A   ++A G+  EM+  G+ P VV                    
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV-------------------- 589

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                          TY+T++ G   T + +  KEL+++M + G + + + YNI++NG  
Sbjct: 590 ---------------TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  V+EA  L+  L  K  +  + T+N +   LF+  + E A+ LF  +    +  D  
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694

Query: 369 TY 370
           TY
Sbjct: 695 TY 696



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 178/374 (47%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLF--PDLYTYSILINCFCKMGQVSLG 65
           P V S+N LL      K  +  L L   + +S G    P++ +Y+I+IN F   GQV   
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKA 222

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F  ++     PNVVT+T++I GLC    +  A  +F ++   G +P+  TYN LI+G
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHG 282

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G     + + +EM+          KP+  TY  +++ LC  G   +A+ LF  M  
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHG------LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIR 336

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PNV  Y  LIHG+      +E   LL  MV+ G+ P+    N+I     K   +D 
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  + + M Q  + P+   Y  L+D  C  G+++     F  M + G   + F +N L+ 
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C   + E+A   Y E+  +GI+P VV +NT+   L    Q  +A +L   M+      
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 366 DTCTYRTFIDGLCV 379
              +Y T I G C+
Sbjct: 517 GVISYTTLIGGHCL 530



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 29/340 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN L+  L     ++     +  + + G+ PD+  ++ ++   C  GQV     +
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P V+++T+LI G C   RI EAA     + + G +P+  TYNTL++G CR
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A  +F+EM       GVV                              + N   
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+II++GL K   VD+A +LF  +  ++    + T+  +I     +    +A  L   + 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ P+V +  +I   L + G ++    L   M +    PN+   N L+      G I 
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           R       ++      +  +  +LI+   +++    A SL
Sbjct: 746 RAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 212/389 (54%), Gaps = 11/389 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F  +L  +AK   +D V+ L+ ++ ++G+  DLY+++ILI+CFC+  ++SL   +
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++  F P++VT  SL+ G C  +R  EA +L   +  FG  PNV+ YNT+INGLC+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +F  M           + + VTY+ +I GL   G    A  L   M    +
Sbjct: 197 NRDLNNALEVFYCMEKKG------IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+ +T+LI  F    +  EA+ L  EM+ + V PNV + N ++N  C +G + +A  
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + DLMV     P+  TYNTL+ GFC + ++    +LF  M   G   D F+YN LI+GYC
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++  A  ++N +   G+ P +VTYN L   L    + E+AL +  ++Q +++  D  
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKG 392
           TY   I GLC   +++     F    RKG
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 6/341 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L KN+  +  L +F  +   G+  D  TY+ LI+     G+ +    +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNV+ FT+LI     E  ++EA  L+ ++      PNV TYN+LING C 
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F  M +          P+ VTY+ +I G CK   V+   +LF +M Y+ L
Sbjct: 302 HGCLGDAKYMFDLMVSKGCF------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LIHG+C A   N A+ +   MVD GV P++V+ N++++ LC NGK++ A  
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++ + + ++  +  TYN ++ G C T K+     LF S+   G K D  +Y  +I+G C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           +     EA  L   +   G  P+   Y+      +    AE
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A +LF ++      P+++ +  ++  + +     + + L+ +M N    +G+    +  
Sbjct: 62  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN----LGI--SHDLY 115

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +++I+I   C+   +  A  L  +M      P++VT  SL++GFC  N + EA  L+  M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G  PNVV  N ++N LCKN  ++NA  +   M +  +R +A TYNTL+ G   +G+ 
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L   M       +   +  LI+ + K   + EA +LY E+  + + P V TYN+L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +G         A  +F  M       D  TY T I G C   +V
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 83/174 (47%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
           H   +++A  L  EM+     P++V    ++  + K  K D    L   M    +  + +
Sbjct: 56  HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           ++  L+  FC   +++    L   M  +G +    +   L+NG+C+    +EA+SL + +
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              G  P VV YNT+ +GL + R    AL++F  M+   + AD  TY T I GL
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 200/377 (53%), Gaps = 11/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K+      + LF+ L   G  PD+ TY+ LI+  CK G +     +
Sbjct: 35  PTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 94

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE--PNVITYNTLINGL 126
            G +      PNVVT++ LI GLC   RI EA  L  ++    C+  PN+ITYN+ ++GL
Sbjct: 95  HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   T  A  L + + +G+  +     P+TVT+S +IDGLCK G +D+A  +F  M   
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRV----SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 210

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNV+TY +L++G C A+    A  ++  MVD+GV P+V++ +V+++  CK  ++D A
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 270

Query: 247 SRLLDLMVQCDVRPNAF-----TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             LL  M      PN       T+N L+ G C  G   +   LF  M +   + D  ++ 
Sbjct: 271 LELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 330

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+G CK  +VE A  + + +   G+ P VVTYN L HGL +  + E A +   EM  +
Sbjct: 331 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 390

Query: 362 DVAADTCTYRTFIDGLC 378
               D+ TY + +  LC
Sbjct: 391 GCVPDSITYGSLVYALC 407



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 200/376 (53%), Gaps = 12/376 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFK-RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V+ +NI+L  L +       L +F+  +   G+ P + TY+ +IN  CK   +  G  +F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             ++     P+VVT+ +LI  LC    + EA  L   + + GC PNV+TY+ LINGLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL- 188
           G    A  L +EMT  + ++     PN +TY+  +DGLCK+    +A EL   ++  +L 
Sbjct: 121 GRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176

Query: 189 -NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+ VT+++LI G C     +EA  +  +M+  G  PNV++ N ++N LCK  KM+ A 
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK-----HDDFSYNI 302
            +++ MV   V P+  TY+ L+D FC   +++   EL   M S GC       D  ++NI
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI G CK    E+A +L+ E+  K ++P V+T+  L  GL +  Q E A  +   M    
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356

Query: 363 VAADTCTYRTFIDGLC 378
           V  +  TY   + GLC
Sbjct: 357 VPPNVVTYNALVHGLC 372



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 187/346 (54%), Gaps = 16/346 (4%)

Query: 49  YSILINCFCKMGQVSLGFVIF-GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           Y+I++   C+ G  +    IF G + R   AP +VT+ ++I GLC  + +     LF +L
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              G  P+V+TYNTLI+ LC+ G    A  L  +M++     G V  PN VTYS++I+GL
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR----GCV--PNVVTYSVLINGL 117

Query: 168 CKEGFVDKAKELFLQMKYENLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--V 223
           CK G +D+A+EL  +M  ++ +  PN++TY S + G C  +   EA  L+  + D    V
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 177

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+ V+ + +++ LCK G++D A  + D M+     PN  TYN L++G C   K+ R   
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV-----VTYNTL 338
           +  SM   G   D  +Y++L++ +CK   V+EAL L + +  +G  P V     VT+N L
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             G  +    E+A  LF EM   ++  D  T+   IDGLC   QV 
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 343



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 194/372 (52%), Gaps = 3/372 (0%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + ++N  L  L K         L + L   S+ + PD  T+S LI+  CK GQ+    
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++   + PNV+T+ +L+ GLC   ++  A A+   +   G  P+VITY+ L++  
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      AL L   M +  G    V  P+ VT++I+I G CK G  ++A  LF +M  +
Sbjct: 262 CKASRVDEALELLHGMAS-RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           NL P+V+T+ +LI G C A     A+ +L  M + GV PNVV+ N +++ LCK+G+++ A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 380

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            + L+ MV     P++ TY +L+   C   + +   +L   ++S G   D  +YNIL++G
Sbjct: 381 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 440

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K+ + E+A+++  E+  KG +P   T+   F GL         ++L   +    +  D
Sbjct: 441 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPD 500

Query: 367 TCTYRTFIDGLC 378
             T  + +D +C
Sbjct: 501 ATTCSSILDWVC 512



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 145/272 (53%), Gaps = 9/272 (3%)

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V  YN ++  LCR G T  AL +F+     +G       P  VTY+ II+GLCK   +  
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDG-----VAPTIVTYNTIINGLCKSNDLGA 55

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
             ELF ++     +P+VVTY +LI   C A D  EA+ L  +M  +G  PNVV+ +V++N
Sbjct: 56  GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN 115

Query: 236 ELCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME--SM 291
            LCK G++D A  L+  M +  CDV PN  TYN+ +DG C         EL  S+   S+
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
               D  +++ LI+G CK  +++EA S+++++   G  P V+TYN L +GL +  + ERA
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 235

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +   M    V  D  TY   +D  C   +V
Sbjct: 236 HAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 6/177 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N L+  L K+   +      + + S G  PD  TY  L+   C+  +      
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +    + P+ VT+  L+ GL    +  +A  +  ++   G +P+  T+    +GL 
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           R+G+    + L + +      +     P+  T S I+D +C+ G +D  K +  + +
Sbjct: 478 RSGNLAGTMELLRVV------LAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 218/410 (53%), Gaps = 44/410 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++ + P+    +S  +LL  + K+   + VL   + + S  + PD   Y+ LI+ F K+G
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V      F  +L    +P+ +T+T+LI+G     +++E   LF ++ + G +P+ +TY 
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+  C+ G  + A +L  EM     ++G+   PN VTY  +IDGLCK G +D A EL 
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMV----QMGMT--PNIVTYGALIDGLCKHGELDTANELL 491

Query: 181 LQMKYENL-----------------------------------NPNVVTYTSLIHGFCHA 205
            +M+ + L                                   +P+ +TYT++I  +C  
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A  LL EM+D+G+QP VV+ NV+MN  C  G +++  RLL  M++  + P+A TY
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           NTLM   C+   +N   +++  M + G   D  +YNILI G+CK + ++EA  LY E+  
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           KG  PTV +YN L    ++ ++   A +LF EM+G+ + AD   Y  F+D
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 8/386 (2%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +S+NI++  L +         L  +++     PD+ +YS +I+ +C +G++     +   
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +      PN  T+ S+I  LC   +  EA  +  ++ +    P+ + Y TLI+G  + GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A   F EM +          P+ +TY+ +I G  + G V + + LF +M    L P+
Sbjct: 379 VRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTYT+LI  +C A +   A  L  EMV  G+ PN+V+   +++ LCK+G++D A+ LLD
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  ++ N   YN++++G C  G I +  +L   ME  G   D  +Y  +I+ YC+  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++++A  L  E+  +G++PTVVT+N L +G   +   E   +L   M    +  D  TY 
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 372 TFIDGLCVRPQVRFTYA--RRKGNSG 395
           T +   C+R  +  T    +R  N G
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQG 638



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 164/338 (48%), Gaps = 45/338 (13%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VA 135
           + PN + F    + L     + EA  L  KL ++G    V + N  ++ +      I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + +F        E G+ +  NT +Y+III  LC+ G V +A  L +QM + +  P+VV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL----- 250
           +++I G+CH  +  +A  L+ +M  +G++PN  + N I+  LCK GK   A ++L     
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 251 ------------------------------DLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                                         D M+   + P+  TY TL+ GF   GK+  
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + LF  M S G K D+ +Y  LI+ YCK  E+  A SL+NE+   G+ P +VTY  L  
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  + + A +L  EM+   +  + C Y + ++G+C
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 149/320 (46%), Gaps = 29/320 (9%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           +LF  + S GL PD  TY+ LI+ +CK G++   F +   +++    PN+VT+ +LI GL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN----- 146
           C    +  A  L  +++  G + NV  YN+++NG+C+ G+   A+ L KEM         
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 147 -------------GEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
                        G+I    K           P  VT++++++G C  G ++    L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + P+ +TY +L+   C  N  N    +   M +QGV P+  + N+++   CK   
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  L   M++    P   +YN L+  F    KI   +ELF  M   G   D   YN 
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNF 718

Query: 303 LINGYCKNKEVEEALSLYNE 322
            ++   +  +VE  L+L +E
Sbjct: 719 FVDMCYEEGDVEITLNLCDE 738



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 2/200 (1%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           Y+   PN + +             +EA+ LL +++  G+   V S N  ++ +  N   +
Sbjct: 183 YKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--E 240

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                + +  +  +  N  +YN ++   C  GK+     L + M+      D  SY+ +I
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GYC   E+++AL L +++  KG+KP   TYN++   L +I ++  A K+  EM    + 
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            D   Y T I G      VR
Sbjct: 361 PDNVVYTTLIHGFFKLGHVR 380


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ L   + +  HY+TV+ L K +  +G+  D+++ SILINCFC + +V  G  +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +IL+    P++VTFT+L+ GLC E ++ +   L+  +   G +PNV TYN +IN L +
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    AL   K+M     ++G V  PN V YS +IDG C  G +D+A+ +F  M  +  
Sbjct: 180 SGKANEALGFLKQME----KVGCV--PNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TYTSL++G+C      EA  LL E + +G+ P++V+   I++ LC+ G+   A +
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +      PN  TY  L+DG C  G +     LF  M+    K +   Y ILI+  C
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++++   L++ L  +G+KP V TY  L   L +      A KLF +M+ +    D C
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC 413

Query: 369 TYRTFIDG 376
            Y   I G
Sbjct: 414 AYNVIIQG 421



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 6/262 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+         D   S+F  + S G  P++YTY+ L+N +CK+ ++     +
Sbjct: 200 PNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL 259

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               LR    P++VTFT++I GLC   R + A  LF  + A G  PN++TY  L++GLC+
Sbjct: 260 LDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCK 319

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  LF+EM           KPN V Y+I+ID LCK G +   KELF ++  E L
Sbjct: 320 HGNLEEAFALFQEMQRST------VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TYT+L+   C      EA  L  +M + G  P+  + NVI+    ++     A +
Sbjct: 374 KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQ 433

Query: 249 LLDLMVQCDVRPNAFTYNTLMD 270
           L++ MV      +A T   L D
Sbjct: 434 LVEEMVNRGFSADAATRALLND 455



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 149/275 (54%), Gaps = 6/275 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P ++ ++ L + + R GH    + L KE+      +G+  + +  + SI+I+  C    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEF----LGI--EQDIHSLSILINCFCHLHRV 113

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D    +  ++    L P++VT+T+L++G C     ++   L  +M+ +G+QPNV + NVI
Sbjct: 114 DFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N L K+GK + A   L  M +    PN   Y+TL+DG+CL G+++  + +F  M S GC
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + ++Y  L+NGYCK + +EEA+ L +E   KG+ P +VT+ T+  GL    +   A +
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           LF  +  +    +  TY   +DGLC    +   +A
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 6/300 (2%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P +V F+ L   +           L  +++  G E ++ + + LIN  C        L++
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             ++      + +  +P+ VT++ +++GLC EG +D+   L+  M    L PNV TY  +
Sbjct: 120 LSKI------LKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I+    +   NEA G L +M   G  PNVV+ + +++  C  G+MD A  + DLMV    
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN +TY +LM+G+C   +I    +L       G   D  ++  +I+G C+      A  
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L+  +   G  P ++TY  L  GL +    E A  LF EMQ + V  +   Y   ID LC
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 77/140 (55%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++ +LL  L K+ + +   +LF+ +    + P+L  Y+ILI+  CK G++  
Sbjct: 301 HGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKD 360

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G  +F R++     PNV T+T+L+  LC E  I+EA  LF K++  GC P+   YN +I 
Sbjct: 361 GKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQ 420

Query: 125 GLCRTGHTIVALNLFKEMTN 144
           G  +     +A  L +EM N
Sbjct: 421 GFLQHKDPSMARQLVEEMVN 440


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 204/370 (55%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K  H    + +   +   GL PD+YTY+ LI+  CK+G++     I
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++    +PN VT+ ++I  LC E+R+ EA  +   L + G  P+V T+N+LI GLC 
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           + +   A++LF+EM  G G      +P+  TY+++ID LC    +++A  L  +M+    
Sbjct: 426 SSNHKSAMDLFEEM-KGKG-----CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NVV Y +LI GFC      EA+ +  EM  QGV  + V+ N +++ LCK+ ++++A++
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   +RP+ FTYN+L+  FC TG I +  ++  +M S GC  D  +Y  LI+G C
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V+ A  L   +  KG+  T   YN +   LF+  +   A++LF EM       D  
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 660 TYKIVYRGLC 669



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 197/375 (52%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+LL  L        V S    +    +  D+ T++ILI   CK  QV    ++
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+  TFT++++G      +  A  +  ++  +GC    +T N LING C+
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+  +E  +        F+P+  TY+ +++GLCK G    A E+   M    L
Sbjct: 286 QGRIDQALSFIQEAVSEG------FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL 339

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TY SLI G C   +  EA  +L +MV +   PN V+ N I++ LCK  ++D A+ 
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATE 399

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  L+    + P+  T+N+L+ G CL+       +LF  M+  GC+ D+F+YN+LI+  C
Sbjct: 400 IARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLC 459

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            ++++EEAL+L  E+   G    VV YNTL  G  + ++ E A ++F EM+   V+ D+ 
Sbjct: 460 SSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV 519

Query: 369 TYRTFIDGLCVRPQV 383
           TY T IDGLC   +V
Sbjct: 520 TYNTLIDGLCKSKRV 534



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 197/409 (48%), Gaps = 41/409 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS-------------------- 50
           VS+FNIL+  L K       + + + + S GL PD  T++                    
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 51  ---------------ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
                          +LIN FCK G++          +   F P+  T+ +L+ GLC   
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
               A  +   +   G +P++ TYN+LI+GLC+ G    A+ +  +M + +        P
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD------CSP 376

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N VTY+ II  LCKE  VD+A E+   +  + + P+V T+ SLI G C +++   A  L 
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM  +G +P+  + N++++ LC + K++ A  LL  M       N   YNTL+DGFC  
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            +I   +E+F  ME  G   D  +YN LI+G CK+K VE+A  L +++  +G++P   TY
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           N+L     +    ++A  +   M  +    D  TY T I GLC   +V+
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 7/301 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L  + ++ + + LF+ +   G  PD +TY++LI+  C   ++     +
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL 470

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +  A NVV + +LI G C   RI EA  +F +++  G   + +TYNTLI+GLC+
Sbjct: 471 LKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCK 530

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A  L  +M      I    +P+  TY+ ++   CK G + KA ++   M     
Sbjct: 531 SKRVEDAAQLMDQM------IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP++VTY +LI G C A     A  LL  +  +G+     + N ++  L K  +   A R
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFC-LTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           L   M+     P+A TY  +  G C   G I    +  V M   G   +  S+ +L  G 
Sbjct: 645 LFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704

Query: 308 C 308
           C
Sbjct: 705 C 705



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            KP+T  Y+++++ L     +   +     M    +  +V T+  LI   C A+    A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            ++ EM   G+ P+  +   IM    + G +D A R+ + MV+        T N L++GF
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G+I++         S G + D F+YN L+NG CK    + A+ + + +   G+ P +
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            TYN+L  GL ++ + E A+K+  +M   D + +  TY   I  LC   +V
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 7/243 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+    KNK  +    +F  +   G+  D  TY+ LI+  CK  +V     +  +++
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+  T+ SL+   C    I +AA +   + + GC P+++TY TLI+GLC+ G   
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           VA  L + +       G+V  P+   Y+ +I  L K     +A  LF +M  ++  P+ +
Sbjct: 606 VASRLLRSIQMK----GMVLTPHA--YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659

Query: 194 TYTSLIHGFCHAN-DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           TY  +  G C+      EA    +EM+++G  P   S  ++   LC     D   +L+D+
Sbjct: 660 TYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDM 719

Query: 253 MVQ 255
           +++
Sbjct: 720 IME 722



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 41/301 (13%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P   T   LI  L R    + AL +F   +         F P++  Y  I+  L K G  
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPN-----FVPSSSVYEEILRKLGKAGSF 113

Query: 174 DKAKELFLQMKYE------------------------------------NLNPNVVTYTS 197
           +  + +  +MK                                       + P+   Y  
Sbjct: 114 EYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNV 173

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L++    AN     +     MV + ++ +V + N+++  LCK  ++  A  +++ M    
Sbjct: 174 LLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYG 233

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + P+  T+ T+M G+   G ++    +   M   GC   D + N+LING+CK   +++AL
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           S   E   +G +P   TYNTL +GL +I  A+ A+++   M    +  D  TY + I GL
Sbjct: 294 SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 378 C 378
           C
Sbjct: 354 C 354


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 209/404 (51%), Gaps = 30/404 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HM+P P  V      LG +AK K Y TV+SL  +++  G+  + YT +ILIN  C++ 
Sbjct: 77  MIHMNPRPSFVE-LGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLS 135

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +  ++ +    P+ VTFT+LI GLC E RI EA  LF ++      PN +T+ 
Sbjct: 136 HIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFT 195

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGV---------------------VFK----- 154
            L++ LC+ G    A  +F+ MT    E  +                     VF+     
Sbjct: 196 ILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGK 255

Query: 155 ---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  +YSI+I+G CK   +D+AK L  QM  + L PN VTY +L+ G CHA+   EA
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + L  +M   G+ PN+ + +++++ LCK+G ++ A +LL  M +  + P+   YN L+ G
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQG 375

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
             + GK+   KELF  + + G +    +YNI+I G  K    +EA  L+ ++   G  P 
Sbjct: 376 MFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPD 435

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             +YN +  G  + +    A++L  EM G   +AD+ T++  +D
Sbjct: 436 SCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 161/311 (51%), Gaps = 6/311 (1%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++     P+ V     +  +  + +     +L  ++  FG   N  T N LIN LCR
Sbjct: 74  FYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCR 133

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A+++  +M     ++G+  +P++VT++ +I+GLC EG + +A ELF +M   + 
Sbjct: 134 LSHIHFAVSVLSKMF----KLGI--QPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VT+T L+   C     +EA+ +   M ++GV+PN+ + N +MN  C   +M++AS+
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASK 247

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + ++MV     P+  +Y+ L++G+C + +I+  K L   M       +  +YN L+ G C
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + EA  L+ ++   G+ P + TY+ L  GL +    E ALKL   MQ   +  D  
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 369 TYRTFIDGLCV 379
            Y   I G+ +
Sbjct: 368 LYNILIQGMFI 378



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 6/282 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A A F ++      P+ +     +  + +       ++L  +M       GV    N
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM----DLFGVAH--N 120

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T +I+I+ LC+   +  A  +  +M    + P+ VT+T+LI+G C+     EA  L  
Sbjct: 121 DYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFN 180

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  +   PN V+  ++++ LCK G +  A  + + M +  V PN +TYN LM+G+CL  
Sbjct: 181 EMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRL 240

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++N   ++F  M   GC     SY+ILINGYCK++ ++EA +L  ++  K + P  VTYN
Sbjct: 241 EMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYN 300

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TL  GL        A +LF +M  + +  +  TY   +DGLC
Sbjct: 301 TLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLC 342



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 71/141 (50%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A      M+  + RP+       +       + + V  L   M+  G  H+D++ NI
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN  C+   +  A+S+ +++   GI+P  VT+ TL +GL    + + A++LF EM G D
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
              +T T+   +D LC +  V
Sbjct: 187 AMPNTVTFTILVDVLCKKGMV 207



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           ++A      M+    +P+ V     +  + K  +      L + M    V  N +T N L
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++  C    I+    +   M  +G + D  ++  LING C    ++EA+ L+NE+  +  
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            P  VT+  L   L +      A  +F  M    V  +  TY   ++G C+R
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 200/377 (53%), Gaps = 9/377 (2%)

Query: 3   HMHPSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           H   +P  V+  +++ G C+A +  +D    LF  +N  G  P   TY+++I+  CK G 
Sbjct: 38  HSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 95

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +     +  +++     P+VVT+ +++ GLC  SR+ EA  LF +++  GC PN  ++NT
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I GLC+      A  +F EM   +        P++ +Y I+IDGL K G +++A +LF 
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKD------IPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    + P+ VTY  +IHG C A   +EA  L   M  +G +P+  + N++++  CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K+D A RLL  M      P+  TY+TL+ G C   +++  + L   M    CK    + N
Sbjct: 270 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+G CK   ++EA  + + +   G  P VVTYNTL HG     Q ERA +L  +M   
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 362 DVAADTCTYRTFIDGLC 378
            +A +  TY   + GLC
Sbjct: 390 GLAPNVVTYTALVSGLC 406



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 194/379 (51%), Gaps = 9/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +  +P   S   I+LG L +    D    +F  + +  + PD ++Y ILI+   K G
Sbjct: 141 MERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAG 199

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +++  + +F R+L S   P+ VT+  +I G+C    + EA  LF  +++ GC P+  T+N
Sbjct: 200 KLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+  C+ G    A  L K MT+ +G +     P+ VTYS +I GLC    VD A+ L 
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTD-DGHV-----PDVVTYSTLISGLCSIARVDDARHLL 313

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M      P VVT  +LIHG C A    EA+ +L  MV  G  P+VV+ N +++  C+ 
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+ + A  LL  MV   + PN  TY  L+ G C   ++     +F  M+S GC  + F+Y
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI G+C   +V+  L L+ E+   GI P  V Y TL   L +  ++ RAL++  E + 
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 361 N--DVAADTCTYRTFIDGL 377
           +    A     YR  +DGL
Sbjct: 494 SLRSEAWGDEVYRFAVDGL 512



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +N   + PD ++Y ILI+   K G+++    +F ++L S   P+ V +TSLI GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
             +A  LF  +   GC P+ +TYN +I+  C+ G    A +L K+M   +G +     P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE-DGHV-----PD 114

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+ ++DGLCK   V++A  LF +M+     PN  ++ ++I G C  +  ++A  +  
Sbjct: 115 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  + + P+  S  ++++ L K GK++ A +L   M+   + P+A TYN ++ G CL  
Sbjct: 175 EMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            ++   ELF SM S GC+   F++NILI+ +CK  +++EA  L   +   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           TL  GL  I + + A  L  +M          T  T I GLC   +++
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 188/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K+   +  L LF  +  +G  P+  +++ +I   C+  ++     +
Sbjct: 113 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  ++  LI GL    ++ EA  LF ++   G  P+ +TYN +I+G+C 
Sbjct: 173 FHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL 232

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL LFK M +         +P+  T++I+ID  CK G +D+A  L  +M  +  
Sbjct: 233 AYTLDEALELFKSMRSKG------CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH 286

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY++LI G C     ++A+ LL +MV +  +P VV+ N +++ LCK G++  A  
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD MV     P+  TYNTL+ G C  G+  R +EL   M + G   +  +Y  L++G C
Sbjct: 347 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  ++ ++   G  P + TY  L  G     Q +  LKLF EM    ++ D  
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466

Query: 369 TYRTFIDGLC 378
            Y T    LC
Sbjct: 467 VYGTLAAELC 476



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 10/246 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L K         +   + S G  PD+ TY+ L++  C+ GQ      +
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    APNVVT+T+L+ GLC  +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L LF EM            P+ V Y  +   LCK G   +A E+  + + E+L
Sbjct: 443 AGQVDGGLKLFGEMVCAG------ISPDHVVYGTLAAELCKSGRSARALEILREGR-ESL 495

Query: 189 NPNVV---TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                    Y   + G   A     A G + +MV  G  P       ++  LCK+G+   
Sbjct: 496 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE 555

Query: 246 ASRLLD 251
           A  +L+
Sbjct: 556 ARAVLE 561


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 220/404 (54%), Gaps = 41/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++ F+ LL  ++K K YD V+ L++++  +G+  +L T +IL+NCFC+  Q+SL    
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++    P++VTF SL+ G C   RI +A  +F ++   G EPNV+ YNT+I+GLC+
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC-------------------- 168
           +     AL+L   M     E+  + +P+ VTY+ +I GLC                    
Sbjct: 199 SKQVDNALDLLNRM-----EVDGI-RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252

Query: 169 ---------------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                          KEG + +A+EL+ +M   +L+P++VTY+ LI+G C  +  +EA+ 
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   MV +G  P+VV+ ++++N  CK+ K+++  +L   M Q  V  N  TY  L+ G+C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+N  +E+F  M   G   +  +YN+L++G C N ++E+AL +  ++   G+   +V
Sbjct: 373 RAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIV 432

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           TYN +  G+ +  +   A  L+  +    +  D  TY   + GL
Sbjct: 433 TYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D + +LF  M      P++  ++ L+        ++    L  +M   G+  N+ + N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A   L  M++    P+  T+ +L++GFC   +I     +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +   YN +I+G CK+K+V+ AL L N +   GI+P  VTYN+L  GL    + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           ++   M   ++  D  T+   ID  CV+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDA-CVK 268



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 236 ELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           E+ +NG    K+D++  L   MVQC   P+   ++ L+       K + V  L+  M+ +
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G  H+  + NIL+N +C+  ++  ALS   ++   G +P +VT+ +L +G     +   A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +F  M       +   Y T IDGLC   QV
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQV 202



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 58/108 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N+LL  L  N   +  L +   +   G+  D+ TY+I+I   CK G+V+  + 
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           ++  +      P++ T+T+++ GL  +    EA ALF K+K  G  PN
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 203/379 (53%), Gaps = 9/379 (2%)

Query: 2   RHMHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +H  P P +  F  LL  +AK   YD V+SLF+++  +G+ P L T +I+++C C   
Sbjct: 73  RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q        G++++  F P++VTFTSL+ G C  +RI +A ALF ++   G +PNV+TY 
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192

Query: 121 TLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           TLI  LC+  H   A+ LF +M TNG+       +PN VTY+ ++ GLC+ G    A  L
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGS-------RPNVVTYNALVTGLCEIGRWGDAAWL 245

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
              M    + PNV+T+T+LI  F       EAK L   M+   V P+V +   ++N LC 
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G +D A ++  LM +    PN   Y TL+ GFC + ++    ++F  M   G   +  +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y +LI GYC     + A  ++N++  +   P + TYN L  GL    + E+AL +F  M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425

Query: 360 GNDVAADTCTYRTFIDGLC 378
             ++  +  TY   I G+C
Sbjct: 426 KREMDINIVTYTIIIQGMC 444



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP + ++N+LL  L  N   +  L +F+ +    +  ++ TY+I+I   CK+G+V   F
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
            +F  +      PNV+T+T++I G C    I EA +LF K+K  G  PN   Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 199/376 (52%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L             + + +  L P++ TY++LI+  CK G+V     +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ + C  P  VT+ SLI GLC   R  EA  L  ++   GC P++ TY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           +  +  AL +F+++      +   F+P+ VTYS +IDGLCKEG + +A +LF +M K  +
Sbjct: 163 SKKSDDALRVFEQL------VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VTY SLI GFC     +EA  LL  M + G  P+VV+   +MN  CK  ++D+A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M +  + P+  T+ +LMDG C   +++    +   M    C    ++YN +++GY
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  ++EEA      L      P VV++N +  GL ++ ++  A++L  E +      D 
Sbjct: 337 CRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 368 CTYRTFIDGLCVRPQV 383
             Y T IDGLC   +V
Sbjct: 395 VMYTTVIDGLCREKKV 410



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L K    D  ++L  ++      P   TY+ LI+  CK  + S  + +
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P++ T+T+LI G C   +  +A  +F +L A G  P+V+TY+ LI+GLC+
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF  M      +     PNTVTY+ +I G C+ G +D+A  L  +M     
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCM-----PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTYT+L++GFC     ++A  LL +M  +G+ P+VV+   +M+ LC+  ++ +A  
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M +    P  +TYNT++DG+C   ++   ++    +E M C  +  S+NI+I G C
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLC 370

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
           K     EA+ L  E   +   P VV Y T+  GL   ++ + A +++ +M +      ++
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 368 CTYRTFIDGLC 378
            TY T + GLC
Sbjct: 431 ITYSTLVTGLC 441



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 181/340 (53%), Gaps = 8/340 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D  TY+ LI   CK+ ++    +  G+++   F P+V T+T++I  LC E+R+ EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++      PNV+TY  LI+GLC+ G    A+ L  +M            P  VTY+ +I
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLI 122

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            GLCK     +A +L  +M Y    P++ TYT+LI GFC +   ++A  +  ++V +G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKE 283
           P+VV+ + +++ LCK G++  A  L   M++     PN  TYN+L+ GFC  GK++    
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M   G   D  +Y  L+NG+CK   +++A  L N++  KG+ P VVT+ +L  GL 
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              +   A+ +  EM+    +    TY T +DG C   Q+
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 10/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K +       L + +   G  PD++TY+ LI  FCK  +      +
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
           F +++   F P+VVT++ LI GLC E R+ EA  LF ++ K+  C PN +TYN+LI+G C
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    A+NL + M     E G    P+ VTY+ +++G CK   +D A +L  QM  + 
Sbjct: 233 RMGKMDEAMNLLERM----AETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVT+TSL+ G C  N  ++A  +L EM  +   P V + N I++  C+  +++ A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           + +  + + D  PN  ++N ++ G C   + +   EL        C  D   Y  +I+G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 308 CKNKEVEEALSLYNE-LPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           C+ K+V+EA  +Y + L   G  P  +TY+TL  GL      +RA
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA 449



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 51/357 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    K+K  D  L +F++L + G  PD+ TYS LI+  CK G++     +
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 207

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           FGR+++S  C  PN VT+ SLI G C   ++ EA  L  ++   G  P+V+TY TL+NG 
Sbjct: 208 FGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A +L  +MT           P+ VT++ ++DGLC+E  +  A  +  +M+ +
Sbjct: 267 CKLARLDDAYDLLNQMTRKG------LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV-------------- 232
           + +P V TY +++ G+C AN   EA+  ++E +D    PNVVS N+              
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 233 ---------------------IMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTYNTLMD 270
                                +++ LC+  K+D A R+   M++     PN+ TY+TL+ 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT 438

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           G C  G ++R +         GC  +  +YN+LI+ + K    E+A  L +++  +G
Sbjct: 439 GLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 150/304 (49%), Gaps = 43/304 (14%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVAL---------------------------------- 136
            C  + +TY +LI GLC+      AL                                  
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 137 -NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
               +EM N N        PN VTY+++IDGLCK G VD+A  L  +M+ + + P  VTY
Sbjct: 66  RKFLEEMANRN------LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTY 118

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            SLI G C A   +EA  LL EMV  G  P++ +   ++   CK+ K D+A R+ + +V 
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVE 314
              RP+  TY+ L+DG C  G++    +LF  M +S  C  +  +YN LI+G+C+  +++
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA++L   +   G  P VVTY TL +G  ++ + + A  L  +M    +  D  T+ + +
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 375 DGLC 378
           DGLC
Sbjct: 299 DGLC 302



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 132/250 (52%), Gaps = 13/250 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++  L+    K    D    L  ++   GL PD+ T++ L++  C+  ++S   
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I G + R   +P V T+ +++ G C  +++ EA      L+   C PNV+++N +I GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGL 369

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   +  A+ L +E             P+ V Y+ +IDGLC+E  VD+A  ++ +M  E
Sbjct: 370 CKVNRSSEAMELVEEARRRR------CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 187 -NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN +TY++L+ G C+A   + A+G     +++G  PN+ + N++++   K  + ++
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 246 ASRLLDLMVQ 255
           A  LLD MVQ
Sbjct: 480 ARELLDDMVQ 489


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 199/376 (52%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L             + + +  L P++ TY++LI+  CK G+V     +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ + C  P  VT+ SLI GLC   R  EA  L  ++   GC P++ TY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           +  +  AL +F+++      +   F+P+ VTYS +IDGLCKEG + +A +LF +M K  +
Sbjct: 163 SKKSDDALRVFEQL------VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VTY SLI GFC     +EA  LL  M + G  P+VV+   +MN  CK  ++D+A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M +  + P+  T+ +LMDG C   +++    +   M    C    ++YN +++GY
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  ++EEA      L      P VV++N +  GL ++ ++  A++L  E +      D 
Sbjct: 337 CRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 368 CTYRTFIDGLCVRPQV 383
             Y T IDGLC   +V
Sbjct: 395 VMYTTVIDGLCREKKV 410



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 200/371 (53%), Gaps = 9/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L K    D  ++L  ++      P   TY+ LI+  CK  + S  + +
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S   P++ T+T+LI G C   +  +A  +F +L A G  P+V+TY+ LI+GLC+
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF  M      +     PNTVTY+ +I G C+ G +D+A  L  +M     
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCM-----PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTYT+L++GFC     ++A  LL +M  +G+ P+VV+   +M+ LC+  ++ +A  
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M +    P  +TYNT++DG+C   ++   ++    +E M C  +  S+NI+I G C
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLC 370

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
           K     EA+ L  E   +   P VV Y T+  GL   ++ + A +++ +M +      ++
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 368 CTYRTFIDGLC 378
            TY T I GLC
Sbjct: 431 ITYSTLITGLC 441



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 181/340 (53%), Gaps = 8/340 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D  TY+ LI   CK+ ++    +  G+++   F P+V T+T++I  LC E+R+ EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++      PNV+TY  LI+GLC+ G    A+ L  +M            P  VTY+ +I
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLI 122

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            GLCK     +A +L  +M Y    P++ TYT+LI GFC +   ++A  +  ++V +G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKE 283
           P+VV+ + +++ LCK G++  A  L   M++     PN  TYN+L+ GFC  GK++    
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M   G   D  +Y  L+NG+CK   +++A  L N++  KG+ P VVT+ +L  GL 
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              +   A+ +  EM+    +    TY T +DG C   Q+
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 10/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K +       L + +   G  PD++TY+ LI  FCK  +      +
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
           F +++   F P+VVT++ LI GLC E R+ EA  LF ++ K+  C PN +TYN+LI+G C
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    A+NL + M     E G    P+ VTY+ +++G CK   +D A +L  QM  + 
Sbjct: 233 RMGKMDEAMNLLERM----AETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVT+TSL+ G C  N  ++A  +L EM  +   P V + N I++  C+  +++ A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           + +  + + D  PN  ++N ++ G C   + +   EL        C  D   Y  +I+G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 308 CKNKEVEEALSLYNE-LPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           C+ K+V+EA  +Y + L   G  P  +TY+TL  GL      +RA
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA 449



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 51/357 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    K+K  D  L +F++L + G  PD+ TYS LI+  CK G++     +
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 207

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           FGR+++S  C  PN VT+ SLI G C   ++ EA  L  ++   G  P+V+TY TL+NG 
Sbjct: 208 FGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A +L  +MT           P+ VT++ ++DGLC+E  +  A  +  +M+ +
Sbjct: 267 CKLARLDDAYDLLNQMTRKG------LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV-------------- 232
           + +P V TY +++ G+C AN   EA+  ++E +D    PNVVS N+              
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 233 ---------------------IMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTYNTLMD 270
                                +++ LC+  K+D A R+   M++     PN+ TY+TL+ 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLIT 438

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           G C  G ++R +         GC  +  +YN+LI+ + K    E+A  L +++  +G
Sbjct: 439 GLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 43/303 (14%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVAL----------------------------------- 136
           C  + +TY +LI GLC+      AL                                   
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
              +EM N N        PN VTY+++IDGLCK G VD+A  L  +M+ + + P  VTY 
Sbjct: 67  KFLEEMANRN------LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SLI G C A   +EA  LL EMV  G  P++ +   ++   CK+ K D+A R+ + +V  
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEE 315
             RP+  TY+ L+DG C  G++    +LF  M +S  C  +  +YN LI+G+C+  +++E
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A++L   +   G  P VVTY TL +G  ++ + + A  L  +M    +  D  T+ + +D
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 376 GLC 378
           GLC
Sbjct: 300 GLC 302



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 132/250 (52%), Gaps = 13/250 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++  L+    K    D    L  ++   GL PD+ T++ L++  C+  ++S   
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I G + R   +P V T+ +++ G C  +++ EA      L+   C PNV+++N +I GL
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGL 369

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   +  A+ L +E             P+ V Y+ +IDGLC+E  VD+A  ++ +M  E
Sbjct: 370 CKVNRSSEAMELVEEARRRR------CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 187 -NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN +TY++LI G C+A   + A+G     +++G  PN+ + N++++   K  + ++
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 246 ASRLLDLMVQ 255
           A  LLD MVQ
Sbjct: 480 ARELLDDMVQ 489


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 211/400 (52%), Gaps = 29/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++  ++  L K + +D   ++F+++   G+ P++ TY+ LI+ +  +G+      
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      PN  T+ SL+  LC   R  EA   F  +   G +P+V TY  +++G  
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYA 354

Query: 128 RTG-----HTIVAL----------NLFKEMTNGNGEIGVVFK--------------PNTV 158
             G     H ++ L          ++F    +   + G++ K              P+ V
Sbjct: 355 TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAV 414

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y  +ID LCK G VD A+  F QM  E + P++V ++SL++G C  + W + + L  EM
Sbjct: 415 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           ++ G+ PN+V  N I+  LCK G++    RL+D +    VRP+  +YNTL+DG CL G I
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   +L   M S+G K D FSYN L++GYCK   ++ A S + ++   GI P VVTYNT+
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+ ++   A +L++ M  +    D  TY   ++GLC
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC 634



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 198/387 (51%), Gaps = 18/387 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNK-------HYDTVLSLFKRLNS---IGLFPDLYTYSILIN 54
           H  P  V +FN LL  ++++          +TV+SLF R+     I + P+  TYSILI 
Sbjct: 43  HARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIG 102

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCE 113
           CFC+MG +  GF  FG IL++ +  + +    L+ GLC   R+ EA   L  ++   GC 
Sbjct: 103 CFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCM 162

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK--PNTVTYSIIIDGLCKEG 171
           P+ ++YN L+ GLC       AL L   M +       V+   PN V+YS +I+G   EG
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQ-----VWSCPPNVVSYSTVINGFFTEG 217

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            VDK   LFL+M    + P+VVTYT++I G C A  ++ A+ +  +M+D GV+PN+ + N
Sbjct: 218 QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYN 277

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +++     GK     R+L+ M     +PN  TY +L++  C  G+    +  F SM   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G K    +Y I+++GY     + E   L N +   GI P    +N  F    +    ++A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +F +M+   ++ D  +Y   ID LC
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALC 424



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++ I+L   A       +  L   + + G+ P+ + ++I  + + K G +     I
Sbjct: 341 PSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDI 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   +P+ V++ +LI  LC   R+ +A   F ++   G  P+++ +++L+ GLC 
Sbjct: 401 FNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCT 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    LF EM N      V   PN V ++ I+  LCKEG V + + L   ++   +
Sbjct: 461 VDKWEKVEELFFEMLN------VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGV 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++Y +LI G C A   +EA  LL  MV  G++P+  S N +++  CK G++D+A  
Sbjct: 515 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+   + P   TYNT++ G   T + +  KEL+++M + G K D ++YNI++NG C
Sbjct: 575 HFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC 634

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  V+EA+ ++  L  KG++  ++T+N +   L +  + E A+ LF  +  N +  +  
Sbjct: 635 KSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVV 694

Query: 369 TYRTFIDGL 377
           TYR  ++ L
Sbjct: 695 TYRLVVENL 703



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNI     AK    D  + +F ++   GL PD  +Y  LI+  CK+G+V    V F +++
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P++V F+SL+ GLC   +  +   LF ++   G  PN++ +NT++  LC+ G  +
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
               L   +      +GV  +P+ ++Y+ +IDG C  G +D+A +L   M    L P+  
Sbjct: 501 EGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y +L+HG+C A   + A     +M+  G+ P VV+ N I++ L +  +   A  L   M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +    + + +TYN +++G C +  ++   ++F ++ S G + +  ++NI+I    K    
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A+ L+  +P  G+   VVTY  +   L E    E    LF  M+ N  A ++      
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 374 IDGLCVRPQV 383
           +  L  R  +
Sbjct: 735 VRRLLHRGDI 744



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 192/418 (45%), Gaps = 44/418 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSLG 65
           P   S+NILL  L   K  +  L L   +    ++   P++ +YS +IN F   GQV   
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP 222

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F  ++     P+VVT+T++I GLC       A A+F ++   G +PN+ TYN LI+G
Sbjct: 223 YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G     + + +EM+ G        KPN  TY  +++ LCK G   +A+  F  M  
Sbjct: 283 YLSIGKWKEVVRMLEEMSAGGP------KPNCCTYGSLLNYLCKNGRCREARFFFDSMIG 336

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-------------------------- 219
           + + P+V TY  ++HG+      +E   LL  MV                          
Sbjct: 337 KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDK 396

Query: 220 ---------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                     QG+ P+ VS   +++ LCK G++D+A    + M+   V P+   +++L+ 
Sbjct: 397 AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C   K  +V+ELF  M ++G   +   +N ++   CK   V E   L + +   G++P
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            V++YNTL  G       + A KL   M    +  D+ +Y T + G C   ++   Y+
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 203/428 (47%), Gaps = 61/428 (14%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V S+N L+   CLA     D    L + + S+GL PD ++Y+ L++ +CK G++   +
Sbjct: 516 PDVISYNTLIDGHCLAGT--IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             F ++L +   P VVT+ +++ GL    R  EA  L+  +   G + ++ TYN ++NGL
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633

Query: 127 CRTGHTIVALNLFKEMTNG---------NGEIGVVFK--------------------PNT 157
           C++     A+ +F+ + +          N  IG + K                     N 
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY ++++ L +EG +++   LF  M+     PN     +L+    H  D + A   L +
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 753

Query: 218 MVDQGVQPNVVSSNV----------------------IMNE------LCKNGKMDNASRL 249
           + ++       ++++                      I+NE      + K  ++D+A  L
Sbjct: 754 LDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSL 813

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M+   + P+  TYNT++ G   TG+ +  KEL++SM +   + + ++YNI++NG CK
Sbjct: 814 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK 873

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  V+EA  ++  L  KG++  ++T+N +   L +  + E A+ LF  +  N +  D  T
Sbjct: 874 SNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 933

Query: 370 YRTFIDGL 377
           YR   + L
Sbjct: 934 YRLVAENL 941



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 172/373 (46%), Gaps = 13/373 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++NI+L  L K+   D  + +F+ L S GL  ++ T++I+I    K G+      +F 
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I  +    NVVT+  +++ L  E  + E  +LF+ ++  G  PN    N L+  L   G
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A     ++   N      F     T S++I     + +   AK L    KY  LN 
Sbjct: 743 DISRAGAYLSKLDERN------FSVEASTTSMLISIFSSDEYQHHAKSL--PKKYRILNE 794

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
                ++LI     A   ++A  L  EM+ +G+ P+VV+ N I++ L + G+   A  L 
Sbjct: 795 --ANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 849

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+    + N +TYN +++G C +  ++   ++F S+ S G + +  ++NI+I    K 
Sbjct: 850 LSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKG 909

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
              E+A+ L+  +P  G+ P VVTY  +   L E    E    LF+ M+ +    D+   
Sbjct: 910 GRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLL 969

Query: 371 RTFIDGLCVRPQV 383
              +  L  R  +
Sbjct: 970 NALVRRLLQRGDI 982



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 34/356 (9%)

Query: 11   VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            + +FNI++G L K    +  + LF  + + GL  ++ TY +++    + G +     +F 
Sbjct: 658  IITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFS 717

Query: 71   RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN------ 124
             + ++  APN     +L++ L     I  A A  +KL          T + LI+      
Sbjct: 718  AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDE 777

Query: 125  ---------------------GLCRTGHTIV-ALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
                                  L +    I  A +LF+EM            P+ VTY+ 
Sbjct: 778  YQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKG------LTPDVVTYNT 831

Query: 163  IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            I+ GL + G   +AKEL+L M       N+ TY  +++G C +N  +EA  +   +  +G
Sbjct: 832  ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 891

Query: 223  VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            +Q N+++ N+++  L K G+ ++A  L   +    + P+  TY  + +     G +    
Sbjct: 892  LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFD 951

Query: 283  ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             LF++ME  G   D    N L+    +  ++  A +  ++L  K       T + L
Sbjct: 952  GLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSEL 1007



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 9/240 (3%)

Query: 80   NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
            N    ++LIK      RI +A +LF ++   G  P+V+TYNT+++GL +TG    A  L+
Sbjct: 793  NEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 849

Query: 140  KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
              M N   ++      N  TY+II++GLCK   VD+A ++F  +  + L  N++T+  +I
Sbjct: 850  LSMINSRTQM------NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMI 903

Query: 200  HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
                      +A  L   +   G+ P+VV+  ++   L + G ++    L   M +    
Sbjct: 904  GALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTP 963

Query: 260  PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
             ++   N L+      G I+R       ++      +  + + LI+ + + +    A SL
Sbjct: 964  LDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 6/206 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N +L  L +   +     L+  + +     ++YTY+I++N  CK   V   F +
Sbjct: 824  PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  +       N++TF  +I  L    R  +A  LF  + A G  P+V+TY  +   L  
Sbjct: 884  FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G       LF  M      +      ++   + ++  L + G + +A     ++  +N 
Sbjct: 944  EGSLEEFDGLFLTMEKSGTPL------DSRLLNALVRRLLQRGDISRAGAYLSKLDEKNF 997

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGL 214
            +    T + LI  F      + AK L
Sbjct: 998  SLEASTTSELISLFSRGEYQHHAKSL 1023


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 199/377 (52%), Gaps = 9/377 (2%)

Query: 3   HMHPSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           H   +P  V+  +++ G C+A +  +D    LF  +N  G  P   TY+++I+  CK G 
Sbjct: 38  HSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGM 95

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +     +  +++     P+VVT+ +++ GLC   R+ EA  LF +++  GC PN  ++NT
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I GLC+      A  +F EM   +        P++ +Y I+IDGL K G +++A +LF 
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARD------IPPDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    + P+ VTY  +IHG C A   +EA  L   M  +G +P+  + N++++  CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           KMD A RLL  M      P+  TY+TL+ G C   +++  + L   M    CK    + N
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+G CK   ++EA  + + +   G  P VVTYNTL HG     Q ERA +L  +M   
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 362 DVAADTCTYRTFIDGLC 378
            +A +  TY   + GLC
Sbjct: 390 GLAPNVVTYTALVSGLC 406



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 194/379 (51%), Gaps = 9/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +  +P   S   I+LG L +    D    +F  + +  + PD ++Y ILI+   K G
Sbjct: 141 MERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAG 199

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +++  + +F R+L S   P+ VT+  +I G+C    + EA  LF  +++ GC P+  T+N
Sbjct: 200 KLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+  C+ G    A  L K MT+ +G +     P+ VTYS +I GLC    VD A+ L 
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTD-DGHV-----PDVVTYSTLISGLCSIARVDDARHLL 313

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M      P VVT  +LIHG C A    EA+ +L  MV  G  P+VV+ N +++  C+ 
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+ + A  LL  MV   + PN  TY  L+ G C   ++     +F  M+S GC  + F+Y
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI G+C   +V+  L L+ E+   GI P  V Y TL   L +  ++ RAL++  E + 
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 361 N--DVAADTCTYRTFIDGL 377
           +    A     YR  +DGL
Sbjct: 494 SLRSEAWGDEVYRFAVDGL 512



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 197/376 (52%), Gaps = 6/376 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N+++    K    +    L K++   G  PD+ TY+ +++  CK G+V    +
Sbjct: 77  PPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALL 136

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    PN  +  ++I GLC +S+I +A  +F +++A    P+  +Y  LI+GL 
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLA 196

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  LF+ M +          P+ VTY+++I G+C    +D+A ELF  M+ + 
Sbjct: 197 KAGKLNEAYKLFRRMLDSG------ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+  T+  LI   C     +EA  LL  M D G  P+VV+ + +++ LC   ++D+A 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ MV+   +P   T NTL+ G C  G+I   +E+  +M S G   D  +YN L++G+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  + E A  L +++  +G+ P VVTY  L  GL +  +   A  +F +M+ +  A + 
Sbjct: 371 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430

Query: 368 CTYRTFIDGLCVRPQV 383
            TY   I G C   QV
Sbjct: 431 FTYTALILGFCSAGQV 446



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 190/348 (54%), Gaps = 6/348 (1%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +N   + PD ++Y ILI+   K G+++    +F ++L S   P+ V +TSLI GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
             +A  LF  +   GC P+ +TYN +I+  C+ G    A +L K+M   +G +     P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIE-DGHV-----PD 114

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+ ++DGLCK G V++A  LF +M+     PN  ++ ++I G C  +  ++A  +  
Sbjct: 115 VVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  + + P+  S  ++++ L K GK++ A +L   M+   + P+A TYN ++ G CL  
Sbjct: 175 EMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            ++   ELF SM S GC+   F++NILI+ +CK  +++EA  L   +   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           TL  GL  I + + A  L  +M          T  T I GLC   +++
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 10/246 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L K         +   + S G  PD+ TY+ L++  C+ GQ      +
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    APNVVT+T+L+ GLC  +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L LF EM            P+ V Y  +   LCK G   +A E+  + + E+L
Sbjct: 443 AGQVDGGLKLFGEMVCAG------ISPDHVVYGTLAAELCKSGRSARALEILREGR-ESL 495

Query: 189 NPNVV---TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                    Y   + G   A     A G + +MV  G  P       ++  LCK+G+   
Sbjct: 496 RSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE 555

Query: 246 ASRLLD 251
           A  +L+
Sbjct: 556 ARAVLE 561



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 2/217 (0%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M   N++P+  +Y  LI G   A   N+A+ L  +++  GV P+ V+   +++ LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            D+A  L   M +    P+  TYN ++D  C  G +    +L   M   G   D  +YN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +++G CK+  VEEAL L+NE+   G  P   ++NT+  GL +  + ++A ++F EM+  D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTYA--RRKGNSGNT 397
           +  D+ +Y   IDGL    ++   Y   RR  +SG T
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGIT 217


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 201/375 (53%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ--VSLGF 66
           P V +++ ++  L K +  D  + +   +   G+ P+  TY+ +++ +C  GQ   ++GF
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGF 288

Query: 67  VIFGR---ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   R   +      P++ T+ +L++G   +  +V   AL   +   G  P+   YN LI
Sbjct: 289 LKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI 348

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
               + G    A+ +F +M            P+ VTY  +I  LCK G V+ A   F QM
Sbjct: 349 CAYAKQGKVDEAMLVFSKMRQQG------LNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             E L+P  + Y SLIHG C  N W  A+ L++EM+D+G+  N +  N I++  CK G++
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             + +L DLMV+  V+P+  TY+TL+DG+CL GK++   +L   M S+G K +  +Y  L
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           INGYCK   + +AL L+ E+   G+ P ++TYN +  GLF+ R+   A +L+V +  +  
Sbjct: 523 INGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 582

Query: 364 AADTCTYRTFIDGLC 378
             +  TY   + GLC
Sbjct: 583 QIELSTYNIILHGLC 597



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 189/396 (47%), Gaps = 41/396 (10%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P ++TY+ILI C C+  ++ LGF   G +++  F    +TFT
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++    C P+V +   L+ GLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMAD 186

Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
           G G             I   FK                    P+ VTYS II  LCK   
Sbjct: 187 GRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +DKA E+   M    + PN  TYTS++HG+C +    EA G L ++   GV+P+ +  ++
Sbjct: 247 MDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDI 306

Query: 233 -----IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                ++      G +     LLDLMV+  + P+ + YN L+  +   GK++    +F  
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G   D  +Y  +I   CK+  VE+A+  + ++  +G+ P  + YN+L HGL    +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            ERA +L +EM    +  +T  + + ID  C   +V
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 188/363 (51%), Gaps = 6/363 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++  LL   A       + +L   +   G+ PD Y Y+ILI  + K G+V    ++
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P+ VT+ ++I  LC   R+ +A   F ++   G  P  I YN+LI+GLC 
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM +     G+    NT+ ++ IID  CKEG V ++++LF  M    +
Sbjct: 424 CNKWERAEELILEMLDR----GICL--NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 477

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY++LI G+C A   +EA  LL  MV  G++PN V+   ++N  CK  +M +A  
Sbjct: 478 KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALV 537

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V P+  TYN ++ G   T +    KEL+V +   G + +  +YNI+++G C
Sbjct: 538 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 597

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK  ++AL ++  L    +K    T+N +   L ++ +   A  LFV    N +  +  
Sbjct: 598 KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYW 657

Query: 369 TYR 371
           TYR
Sbjct: 658 TYR 660



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 175/375 (46%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +NIL+   AK    D  + +F ++   GL PD  TY  +I   CK G+V    + 
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    +P  + + SLI GLC  ++   A  L  ++   G   N I +N++I+  C+
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  I +  LF  M      IGV  KP+ +TYS +IDG C  G +D+A +L   M    L
Sbjct: 459 EGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL 512

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LI+G+C  +   +A  L  EM   GV P++++ N+I+  L +  +   A  
Sbjct: 513 KPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 572

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + +   +    TYN ++ G C     +    +F ++  M  K +  ++NI+I+   
Sbjct: 573 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 632

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  L+      G+ P   TY  +   +      E   +LF+ M+ N    D+ 
Sbjct: 633 KVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 692

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R ++
Sbjct: 693 MLNFIVRELLQRGEI 707


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 199/374 (53%), Gaps = 13/374 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL    K    D  L +F      G  PD+ TY+ LIN FCK  ++     I
Sbjct: 43  PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++     P+VVT+ SL+ GLC   R+ EA  L    K F   PNVITY+TLI+GLCR
Sbjct: 103 LQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD-KGF--SPNVITYSTLISGLCR 159

Query: 129 TGHTIV-ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
               +  AL LF  +          ++P   TY+I+IDGL KE  V++A ELF  +    
Sbjct: 160 ELRGVSEALKLFGSVLKQG------YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 213

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +TYT  I G C A    +A  +L +M ++G  P+VVS N ++N LCK  ++D A 
Sbjct: 214 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 273

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M      PNA ++NTL+ G C  GK  +    F  M   G K    +YNIL++G 
Sbjct: 274 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 333

Query: 308 CKNKE---VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           CK ++   ++EA++L++ +  KG  P VVTY+ L  GL +  + + A +L   M+     
Sbjct: 334 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 393

Query: 365 ADTCTYRTFIDGLC 378
            +  TY + I GLC
Sbjct: 394 PNVYTYNSLISGLC 407



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 13/377 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N LL  L          +L++R+   G  PD+ TY+ L++ FCK+G++  
Sbjct: 4   HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF   ++  F P+VVT+ +LI G C   ++ EA  +  ++ +    P+V+TYN+L+N
Sbjct: 64  ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQM 183
           GLC+ G    A  L  +           F PN +TYS +I GLC+E   V +A +LF  +
Sbjct: 124 GLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             +   P V TY  LI G    +  NEA  L   +V  G++P+ ++  V ++ LCK G++
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           ++A  +L  M +    P+  ++N +++G C   +++  + L   ME+ GC  +  S+N L
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER---ALKLFVEMQG 360
           I G C+  + ++A++ + E+  +G+KPTVVTYN L  GL + RQ  R   A+ LF  M  
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 361 NDVAADTCTYRTFIDGL 377
                D  TY   IDGL
Sbjct: 355 KGRVPDVVTYSALIDGL 371



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 190/335 (56%), Gaps = 13/335 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK-MGQVSLGFV 67
           P V ++N L+  L KN   D    L   +   G  P++ TYS LI+  C+ +  VS    
Sbjct: 113 PDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALK 169

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +L+  + P V T+  LI GL  E R+ EA  LF+ L   G EP+ ITY   I+GLC
Sbjct: 170 LFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 229

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    AL + K+M     E G V  P+ V+++ +I+GLCKE  VD+A+ L   M+ + 
Sbjct: 230 KAGRVEDALLMLKDMD----EKGCV--PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK---NGKMD 244
            +PN +++ +LI G C A  W +A     EM+ +GV+P VV+ N++++ LCK    G++ 
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L D M++    P+  TY+ L+DG    GK++  + L  +ME+ GC  + ++YN LI
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +G C  ++V+EAL L+  +  KG  P  +TY T+ 
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 188/350 (53%), Gaps = 11/350 (3%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G +P+  TY+ L++  C  G++S    ++ R++++ ++P+VVT+ +L+ G C    + EA
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +F      G  P+V+TYN LING C+      A  + + M + N        P+ VTY
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN------LVPDVVTY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA-NDWNEAKGLLIEMV 219
           + +++GLCK G VD+A+ L +    +  +PNV+TY++LI G C      +EA  L   ++
Sbjct: 119 NSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            QG +P V + N++++ L K  +++ A  L   +V+  + P+A TY   +DG C  G++ 
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +   M+  GC  D  S+N +ING CK K V+EA  L + +  KG  P  +++NTL 
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-VRPQVRFTYA 388
            G     + ++A+  F EM    V     TY   +DGLC  R + R   A
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 152/279 (54%), Gaps = 12/279 (4%)

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           ++  G  PN ITYN L++GLC  G    A  L++ M          + P+ VTY+ ++ G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------YSPDVVTYNTLLHG 54

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            CK G +D+A ++F         P+VVTY +LI+GFC A+  +EA+ +L  MV + + P+
Sbjct: 55  FCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPD 114

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC--LTGKINRVKEL 284
           VV+ N ++N LCKNG++D A  L+   V     PN  TY+TL+ G C  L G ++   +L
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRG-VSEALKL 170

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F S+   G + +  +YNILI+G  K   V EA  L++ L   G++P  +TY     GL +
Sbjct: 171 FGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             + E AL +  +M       D  ++   I+GLC   +V
Sbjct: 231 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 269



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 155/302 (51%), Gaps = 10/302 (3%)

Query: 9   PPVSSFNILLGCLAKN-KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V +++ L+  L +  +     L LF  +   G  P++ TY+ILI+   K  +V+  F 
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFE 204

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +++    P+ +T+T  I GLC   R+ +A  +   +   GC P+V+++N +INGLC
Sbjct: 205 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 264

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  L   M            PN ++++ +I G C+ G   KA   F +M    
Sbjct: 265 KEKRVDEAEVLLSGMEAKG------CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318

Query: 188 LNPNVVTYTSLIHGFCHAND---WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           + P VVTY  L+ G C A       EA  L   M+++G  P+VV+ + +++ L K GK+D
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A RLL  M      PN +TYN+L+ G C   K++   ELFV+M   GC  D  +Y  +I
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438

Query: 305 NG 306
           + 
Sbjct: 439 SA 440


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 202/385 (52%), Gaps = 14/385 (3%)

Query: 5   HPSPPPVSSFNILLGCLAK-------NKHYDTVLSLFKRLN---SIGLFPDLYTYSILIN 54
           H  P  + +FN LL  +++           + V+SLF R+    +I + PDL TYSILI 
Sbjct: 43  HARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIG 102

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCE 113
           CFC+MG++  GF  FG IL+S +  N +    L+KGLC   R+ EA  +  K +   GC 
Sbjct: 103 CFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCT 162

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+V++YNTL+ G C       AL L   M +  G       PN V+Y+ +I+G   EG V
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYATVINGFFTEGQV 219

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA  LFL+M    + PNVVTYT++I G C A   + A+G+  +M+D+GV+P+  + N +
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++     GK     R+L+ M    ++P+ +TY +L++  C  G+    +  F SM   G 
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGI 339

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K +   Y ILI+GY     + E   L N +   G+ P    +N +F    +    + A+ 
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +F +M+   ++ D   +   ID LC
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALC 424



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+        +  V+ + + +++ GL PD YTY  L+N  C  G+       
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    PNV  +  LI G   +  + E   L   +   G  P+   +N +     +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+++F +M            P+ V +  +ID LCK G VD A   F QM  E +
Sbjct: 391 KAMIDEAMHIFNKMKQQG------LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  + SL++G C  + W +AK    EM++QG++P+VV  N I+  LC  G++  A R
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+DLM +   RP+  +Y TL+ G CL G+I+   +    M S+G K D+++YN L++GYC
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   +++A  ++ E+   GI P VVTY+T+ HGLF  R+   A +L++ M  +    +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 369 TYRTFIDGL 377
            Y   ++GL
Sbjct: 625 IYNIILNGL 633



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+ + IL+   A       +  L   +   GL PD + ++I+   + K   +     I
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   +P+VV F +LI  LC   R+ +A   F ++   G  PN+  +N+L+ GLC 
Sbjct: 401 FNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   + EM N         +P+ V ++ I+  LC +G V KA+ L   M+    
Sbjct: 461 VDKWEKAKEFYFEMLNQG------IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++YT+LI G C     +EA   L  M+  G++P+  + N +++  C+ G++D+A  
Sbjct: 515 RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M++  + P   TY+T++ G   T + +  KEL+++M + G + + + YNI++NG  
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  V+EA  L+  L  K  +  + T+N +   LF+  + E A+ LF  +    +  D  
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694

Query: 369 TY 370
           TY
Sbjct: 695 TY 696



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLF--PDLYTYSILINCFCKMGQVSLG 65
           P V S+N LL      K  +  L L   + +S G    P++ +Y+ +IN F   GQV   
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKA 222

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + +F  ++     PNVVT+T++I GLC    +  A  +F ++   G +P+  TYN LI+G
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHG 282

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G     + + +EM+          KP+  TY  +++ LC  G   +A+  F  M  
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHG------LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR 336

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PNV  Y  LIHG+      +E   LL  MV+ G+ P+    N+I     K   +D 
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  + + M Q  + P+   +  L+D  C  G+++     F  M + G   + F +N L+ 
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C   + E+A   Y E+  +GI+P VV +NT+   L    Q  +A +L   M+      
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 366 DTCTYRTFIDGLCV 379
           D  +Y T I G C+
Sbjct: 517 DVISYTTLIGGHCL 530



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 175/395 (44%), Gaps = 29/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI+    AK    D  + +F ++   GL PD+  +  LI+  CK+G+V    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    APN+  F SL+ GLC   +  +A   + ++   G  P+V+ +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 129 TGHTIVALNL---------------FKEMTNGNGEIG--------------VVFKPNTVT 159
            G  + A  L               +  +  G+  +G              V  KP+  T
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++ G C+ G +D A  +F +M    + P VVTY++++HG      ++EAK L + M+
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G Q N+   N+I+N L KN  +D A +L   +   D +    T+N ++     +G+  
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF ++ S G   D F+Y ++     +   +EE   L++ +   G  P     N L 
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             L       RA     ++   + + +  T    I
Sbjct: 736 RRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 29/340 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN L+  L     ++     +  + + G+ PD+  ++ ++   C  GQV     +
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+V+++T+LI G C   RI EAA     + + G +P+  TYNTL++G CR
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A  +F+EM       GVV                              + N   
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+II++GL K   VD+A +LF  +  ++    + T+  +I     +    +A  L   + 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ P+V +  +I   L + G ++    L   M +    PN+   N L+      G I 
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           R       ++      +  +  +LI+   +++    A SL
Sbjct: 746 RAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+  TY+ L+  FC  G++      F  +   G + ++   N L+ G C  K + EA+
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 318 S-LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF---VEMQGNDVAADTCTYRTF 373
             L   +P  G  P VV+YNTL  G    ++AE AL+L     + QG     +  +Y T 
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 374 IDGLCVRPQVRFTY 387
           I+G     QV   Y
Sbjct: 210 INGFFTEGQVDKAY 223


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 202/405 (49%), Gaps = 35/405 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++N+++  L K +       + K + +   + PDL TYS +IN FCK G++     
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           I   ++ R   AP+VVT+TS++ GLC + ++  A  +  ++K  G EP+  T++ LI G 
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVV--------------------------------FK 154
           C       AL L+KE+   +  +  V                                +K
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ VTY+ +IDG CK G ++KA ++   M+     PNVVTY+SL+HG C A D ++A  L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M  +G  PNVV+   +++ LC   K+D A  L+D M       +  +YN L+DG+C 
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA-LSLYNELPFKGIKPTVV 333
            G+I   K+LF  M +  C  D  +Y  L+ G+C    +EEA   L N     GI P VV
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY+ +  G    ++   A +   EM   +VA +  TY + IDGLC
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 411



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 211/396 (53%), Gaps = 20/396 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLN--SIGLF-PDLYTYSILINCFCKMGQVSLGFV 67
           VSS  ++ G L + +       LF+ +     G + PD+ TY+ LI+ FCK G +     
Sbjct: 152 VSSSALITG-LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMK 210

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G +      PNVVT++SL+ GLC    + +A  LF ++ + GC PNV+TY TLI+GLC
Sbjct: 211 MLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC 270

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                  A  L  EMT            +TV+Y+ ++DG C+ G +++AK+LF +M  ++
Sbjct: 271 AAHKVDAARLLMDEMT------ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TYT L+ GFC+A+   EA+ LL  M    G+ P+VV+ ++++    +  +   A
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +  +  M+  +V PNA TY++L+DG C  G++N   E+  +++    K D  +Y I+I G
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEG 440

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C     EEAL+L  E+  K ++P+V T+N++   L  +   + A KL V M  + +   
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500

Query: 367 TCTYRTFIDGLCVRPQVRFTYA-----RRKGNSGNT 397
             TY T ++G     ++   Y      RRK    ++
Sbjct: 501 MVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 188/391 (48%), Gaps = 55/391 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL---- 64
           P V +++ LL  L K    D  L LF+R+ S G  P++ TY+ LI+  C   +V      
Sbjct: 222 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 281

Query: 65  ---------------------GFVIFGRI-----------LRSCFAPNVVTFTSLIKGLC 92
                                G+   GRI            +SC  P+ +T+T L++G C
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCL-PDRITYTCLVRGFC 340

Query: 93  AESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
             SR+ EA  L   +K A G +P+V+TY+ ++ G  R    + A    +EM   N     
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN----- 395

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PN VTYS +IDGLCK G V+ A E+   +      P+VVTYT +I G C  +   EA
Sbjct: 396 -VAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEA 450

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             LL EMV++ V+P+V + N ++  LC+ G MD A +LL  M    + P   TY TL++G
Sbjct: 451 LTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 510

Query: 272 FCLTGKINRVKELFVSMESMGCKHD-------DFSYNILINGYCKNKEVEEALSLYNELP 324
           F  TG++    ELF  M     K         + +++ LI G CK +E+++A+++  EL 
Sbjct: 511 FSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELR 570

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            +  +P       +  GL    + E A KL 
Sbjct: 571 SRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 169/310 (54%), Gaps = 9/310 (2%)

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGH 131
           +R   APN  T+  ++ GLC      +A  +  +++      P+++TY+T+ING C+ G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + +EM   +G       P+ VTY+ ++DGLC++G +D+A E+  +MK + + P+
Sbjct: 61  MDRACEILREMVTRDG-----MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 115

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             T+++LI G+C+A   +EA  L  E++    + + VSS+ ++  LC+  ++  A  L  
Sbjct: 116 KFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQ 175

Query: 252 LMVQCD---VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            M   +    +P+  TY  L+DGFC +G + +  ++   ME   C  +  +Y+ L++G C
Sbjct: 176 EMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 235

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++++AL L+  +  KG  P VVTY TL HGL    + + A  L  EM      ADT 
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 369 TYRTFIDGLC 378
           +Y   +DG C
Sbjct: 296 SYNALLDGYC 305



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 9/274 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PN  TYN ++NGLC+   T  A  + KEM +G         P+ VTYS +I+G CK+G +
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKS-----VAPDLVTYSTVINGFCKQGEM 61

Query: 174 DKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           D+A E+  +M   + + P+VVTYTS++ G C     + A  ++ EM  +GV+P+  + + 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME--- 289
           ++   C   K+D A +L   ++    R +A + + L+ G C   +I    ELF  ME   
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
               K D  +Y  LI+G+CK+  +E+A+ +   +  +   P VVTY++L HGL +    +
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +AL LF  M       +  TY T I GLC   +V
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 53/328 (16%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG-F 66
           P    S+N LL    +    +    LFK + +    PD  TY+ L+  FC   ++    F
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++      +   P+VVT++ ++ G     R VEAA    ++ A    PN +TY++LI+GL
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A+ + K           V KP+ VTY+I+I+GLC     ++A  L  +M  +
Sbjct: 411 CKAGRVNHAMEVLKN----------VDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV------------------ 228
            + P+V T+ S+I   C   D +EA  LL+ M   G++P +V                  
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520

Query: 229 ----------------SSNVIMNE--------LCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                           ++N++  +        LCK  ++D A  +++ +   +  P    
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMG 292
              ++DG    G+     +L  S+  +G
Sbjct: 581 CLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 2/167 (1%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRV 281
           V PN  + NV++N LCK      A  +L  M     V P+  TY+T+++GFC  G+++R 
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 282 KELFVSMESM-GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            E+   M +  G   D  +Y  +++G C++ +++ A  +  E+  KG++P   T++ L  
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           G    R+ + ALKL+ E+  +    D  +    I GLC   ++   Y
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAY 171


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 218/398 (54%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++ F+ LL  ++K K YD V+ L++++  +G+  +L T +IL+NCFC+  Q+SL    
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++++    P++VTF SL+ G C   R+ +A  +F ++   G +PNV+ YNT+I+GLC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFK----------------------------PNTVT 159
           +     AL+L   M  +G G   V +                             P+  T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +ID   KEG V +A+E + +M   +L+P++VTY+ LI+G C  +  +EA+ +   MV
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+VV+ ++++N  CK+ K+++  +L   M Q  V  N  TY  L+ G+C  GK+N
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +E+F  M   G   +  +YN+L++G C N ++E+AL +  ++   G+   +VTYN + 
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G+ +  +   A  ++  +    +  D  TY T + GL
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D + +LF  M      P++  ++ L+        ++    L  +M   G+  N+ + N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  C+  ++  A   L  M++    P+  T+ +L++GFC   ++     +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K +   YN +I+G CK+K+V+ AL L N +   GI P VVTYN+L  GL    +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           ++   M   ++  D  T+   ID  CV+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDA-CVK 268



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 236 ELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           E+ +NG    K+D++  L   MVQC   P+   ++ L+       K + V  L+  M+ +
Sbjct: 51  EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G  H+  + NIL+N +C+  ++  ALS   ++   G +P++VT+ +L +G     +   A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +F +M G     +   Y T IDGLC   QV
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/379 (34%), Positives = 209/379 (55%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKN-KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V +++ L+  L +  +  ++   L +++   G  PD+ +Y+ LI+   +   VS    
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FG +LR  + P V T+  LI GL  E R+ EA  LF+ L   G EP+ ITY   I+GLC
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    AL + K+M     E G V  P+ V+++ +I+GLCKE  VD+A+ L   M+ + 
Sbjct: 340 KAGRVEDALLMLKDMD----EKGCV--PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK---NGKMD 244
            +PN +++ +LI G C A  W +A     EM+ +GV+P VV+ N++++ LCK    G++ 
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L D M++    P+  TY+ L+DG    GK++  + L  +ME+ GC  + ++YN LI
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G C   +V+EAL L+  +  KG  P  +TY T+   L +    ++AL LF       V 
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVV 573

Query: 365 ADTCTYRTFIDGLCVRPQV 383
             +  Y + IDGLC   +V
Sbjct: 574 PTSGMYFSLIDGLCAVARV 592



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 200/386 (51%), Gaps = 11/386 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N LL  L          +L++R+   G  PD+ TY+ L++ FCK+G++  
Sbjct: 79  HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDE 138

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF   ++  F P+VVT+ +LI G C   ++ EA  +  ++ +    P+V+TYN+L+N
Sbjct: 139 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVN 198

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQM 183
           GLC+ G    A  L  +           F PN +TYS +I GLC+E   ++ A++L  +M
Sbjct: 199 GLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 P++V+Y +LIHG       +EA  L   ++ QG +P V + N++++ L K  ++
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           + A  L   +V+  + P+A TY   +DG C  G++     +   M+  GC  D  S+N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING CK K V+EA  L + +  KG  P  +++NTL  G     + ++A+  F EM    V
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 364 AADTCTYRTFIDGLC-VRPQVRFTYA 388
                TY   +DGLC  R + R   A
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEA 455



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 205/376 (54%), Gaps = 11/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +  ILL  L K+   +      ++L   GL  D+ T++I I+  C+  ++     +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +  F PN +T+ +L+ GLC   R+ +A AL+ ++   G  P+V+TYNTL++G C+
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F      +G +   F P+ VTY+ +I+G CK   +D+A+ +  +M  E+L
Sbjct: 133 VGKLDEALKIF------DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNAS 247
            P+VVTY SL++G C     +EA+ L+   VD+G  PNV++ + +++ LC+   ++++A 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESAR 243

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL+ MV    +P+  +YN L+ G      ++   +LF S+   G + +  +YNILI+G 
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   V EA  L++ L   G++P  +TY     GL +  + E AL +  +M       D 
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 368 CTYRTFIDGLCVRPQV 383
            ++   I+GLC   +V
Sbjct: 364 VSHNAVINGLCKEKRV 379



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 152/315 (48%), Gaps = 44/315 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+  L K    +    LF  L   GL PD  TY++ I+  CK G+V    ++
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN------------- 115
              +      P+VV+  ++I GLC E R+ EA  L + ++A GC PN             
Sbjct: 351 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 410

Query: 116 ----------------------VITYNTLINGLCRT---GHTIVALNLFKEMTNGNGEIG 150
                                 V+TYN L++GLC+    G    A+ LF  M     E G
Sbjct: 411 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI----EKG 466

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            V  P+ VTYS +IDGL K G +D A+ L   M+ +   PNV TY SLI G C  +  +E
Sbjct: 467 RV--PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L + MV++G  P+ ++   I++ LCK   +D A  L D  ++  V P +  Y +L+D
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584

Query: 271 GFCLTGKINRVKELF 285
           G C   +++   +L 
Sbjct: 585 GLCAVARVDEALKLL 599



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 5/239 (2%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           ++ P+  T  I++  L K G ++KA     Q+  + L  ++ T+   I G C A+   +A
Sbjct: 11  IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDA 69

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + +   M   G  PN ++ N +++ LC  G+M +A  L + M++    P+  TYNTL+ G
Sbjct: 70  QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           FC  GK++   ++F      G   D  +YN LING+CK  +++EA  +   +  + + P 
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           VVTYN+L +GL +  + + A  L V+      + +  TY T I GLC R   R   AR+
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLC-RELRRLESARQ 244



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K    D    L   + + G  P++YTY+ LI+  C + +V     +
Sbjct: 469 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALEL 528

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ +T+ ++I  LC +  + +A ALF      G  P    Y +LI+GLC 
Sbjct: 529 FVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCA 588

Query: 129 TGHTIVALNLFK 140
                 AL L +
Sbjct: 589 VARVDEALKLLQ 600


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 210/400 (52%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D    + +++    + PD  TY+ +I+ +  +G+      +
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P++VTF SL+  LC   R  EAA +F  +   G +P++I+Y+ L++G   
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 129 TGHTIVALNLFKEMT---------------NGNGEIGVV--------------FKPNTVT 159
            G  +   NLF  MT               N + + G++                PN VT
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I  LC+ G +  A E   QM    L PN V Y SLI GFC   D  +AK L+ EM+
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 220 DQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           DQG+ +PN+   + I++ LC  G++ NA  + +L++    RP+ FT+N+L+DG+CL GK+
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++   +  +M S G + D  +Y+ LINGY K+  +++ L L+ E+  K +KPT VTY+ +
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF   +   A K+F EM  +  A    TY   + GLC
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 191/373 (51%), Gaps = 8/373 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF- 66
           P  V ++ IL+ C  + +  D   + F RL   GL  D    +  + C C   +      
Sbjct: 162 PLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALS 221

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLING 125
           ++  R+      P+  ++ ++IK LC  SR  EA  +  ++ K  GC P+V++Y  +I+G
Sbjct: 222 MLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L   G    A NLF EM     + GVV  PN VTY+ I+  LCK   +DKA+ +  QM  
Sbjct: 282 LFMEGEISKACNLFNEMV----QKGVV--PNVVTYNSIVHALCKARAMDKAELVLRQMFD 335

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            ++ P+ VTYT++IHG+     W EA  +  EM  +G+ P++V+ N +M+ LCK+ +   
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +   +     +P+  +Y+ L+ G+   G+   +  LF SM   G   D   +NILIN
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            + K   ++EAL ++ E+  +G+ P VVTY T+   L  + +   A++   +M    +  
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 366 DTCTYRTFIDGLC 378
           +T  Y + I G C
Sbjct: 516 NTVVYHSLIQGFC 528



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 193/366 (52%), Gaps = 5/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ILL   A    +  + +LF  +   G+  D + ++ILIN   K G +    +I
Sbjct: 410 PDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLI 469

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PNVVT+ ++I  LC   R+ +A    +++ + G +PN + Y++LI G C 
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT 529

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  I A  L  EM +       + +PN   +S II  LC EG V  A+++F  + +   
Sbjct: 530 HGDLIKAKELVSEMMDQG-----IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ SLI G+C     ++A G+L  MV  G +P+VV+ + ++N   K+G++D+   
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V+P   TY+ ++DG    G+ +  K++F  M   G      +Y I++ G C
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA++L+++L    +K  +   NT+ H L+++++ E A  LF  +  + +  +  
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764

Query: 369 TYRTFI 374
           TY   I
Sbjct: 765 TYGVMI 770



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 7/355 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+   AK    D  L +F  +   G+ P++ TY+ +I   C+MG+++       +++
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                PN V + SLI+G C    +++A  L +++   G   PN+  ++++I+ LC  G  
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A ++F      N  I +  +P+  T++ +IDG C  G +DKA  +   M      P+V
Sbjct: 570 MNAQDVF------NLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY++LI+G+  +   ++   L  EM+ + V+P  V+ +++++ L + G+   A ++   
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M++     +  TY  ++ G C     +    LF  + +M  K +    N +I+   K K 
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            EEA  L+  +   G+ P   TY  +   L +    E A  +F  M+    A  +
Sbjct: 744 REEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSS 798


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 9/347 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L   G  PD+ TY++LI+ +CK G++     +  R+     AP+VVT+ ++++ LC   +
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGK 231

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A  +  +     C P+VITY  LI   C+      A+ L  EM N         KP+
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS------KPD 285

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+++I+G+CKEG +D+A +    M      PNV+T+  ++   C    W +A+ LL 
Sbjct: 286 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS 345

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+ +G  P+VV+ N+++N LC+ G +  A  +L+ M      PN+ +YN L+ GFC   
Sbjct: 346 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK 405

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K++R  E    M S GC  D  +YN L+   CK+ +V+ A+ + N+L  KG  P ++TYN
Sbjct: 406 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 465

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           T+  GL ++ + ERA+KL  EM+   +  D  TY + + GL    +V
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 512



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R      +PD+ TY+ILI   CK   V     +
Sbjct: 214 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+  LI G+C E R+ EA      + ++GC+PNVIT+N ++  +C 
Sbjct: 274 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M            P+ VT++I+I+ LC++G + +A ++  +M     
Sbjct: 334 TGRWMDAEKLLSDMLRKG------CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK+D A  
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 447

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK  R  +L   M   G K D  +Y+ L++G  
Sbjct: 448 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 507

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA+  +++L   GI+P  +TYN++  GL + RQ +RA+     M          
Sbjct: 508 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 567

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 568 TYTILIEGI 576



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 198/374 (52%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K+   D  L +  R+N   + PD+ TY+ ++   C  G++     +
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R L+    P+V+T+T LI+  C ES + +A  L  +++  G +P+V+TYN LING+C+
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+     M +         +PN +T++II+  +C  G    A++L   M  +  
Sbjct: 299 EGRLDEAIKFLNNMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++  CK  KMD A  
Sbjct: 353 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD+MV     P+  TYNTL+   C  GK++   E+   + S GC     +YN +I+G  
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + E A+ L +E+  KG+KP ++TY++L  GL    + + A+K F +++G  +  +  
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 532

Query: 369 TYRTFIDGLCVRPQ 382
           TY + + GLC   Q
Sbjct: 533 TYNSIMLGLCKSRQ 546



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+    K       + L   + + G  PD+ TY++LIN  CK G++      
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV+T   +++ +C+  R ++A  L + +   GC P+V+T+N LIN LCR
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++ ++M            PN+++Y+ ++ G CKE  +D+A E    M     
Sbjct: 369 QGLLGRAIDILEKMPMHG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L+   C     + A  +L ++  +G  P +++ N +++ L K GK + A +
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M +  ++P+  TY++L+ G    GK++   + F  +E +G + +  +YN ++ G C
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+++ + A+     +  K  KPT  TY  L  G+     A+ AL L  E+
Sbjct: 543 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 6/322 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+     
Sbjct: 282 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 341

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR   +P+VVTF  LI  LC +  +  A  +  K+   GC PN ++YN L++G 
Sbjct: 342 KLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 401

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A+     M +          P+ VTY+ ++  LCK+G VD A E+  Q+  +
Sbjct: 402 CKEKKMDRAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P ++TY ++I G         A  LL EM  +G++P++++ + +++ L + GK+D A
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +    +    +RPNA TYN++M G C + + +R  +    M S  CK  + +Y ILI G
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575

Query: 307 YCKNKEVEEALSLYNELPFKGI 328
                  +EAL L NEL  +G+
Sbjct: 576 IAYEGLAKEALDLLNELCSRGL 597



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 6/220 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           MH   P   S+N LL    K K  D  +     + S G +PD+ TY+ L+   CK G+V 
Sbjct: 384 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I  ++     +P ++T+ ++I GL    +   A  L  +++  G +P++ITY++L+
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GL R G    A+  F ++       G+  +PN +TY+ I+ GLCK    D+A +    M
Sbjct: 504 SGLSREGKVDEAIKFFHDLE------GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
             +   P   TYT LI G  +     EA  LL E+  +G+
Sbjct: 558 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + G ++   +    M Y    P+++  TSLI GFC      +A  ++  +   G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V++ NV+++  CK+G++DNA ++LD M   +V P+  TYNT++   C +GK+ +  E+  
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                 C  D  +Y ILI   CK   V +A+ L +E+  KG KP VVTYN L +G+ +  
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + A+K    M       +  T+   +  +C
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  L +NG++++  + L+ MV     P+     +L+ GFC  GK  +   +   +E  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +YN+LI+GYCK+ E++ AL + + +    + P VVTYNT+   L +  + ++A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +       +   D  TY   I+  C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATC 262


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 196/357 (54%), Gaps = 12/357 (3%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           + K K    V+ +   L   G  PD+ TY++LI+ +CK G++     +  R+     AP+
Sbjct: 105 IGKTKKATWVMEI---LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPD 158

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VVT+ ++++ LC   ++ +A  +  +     C P+VITY  LI   C+      A+ L  
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           EM N         KP+ VTY+++I+G+CKEG +D+A +    M      PNV+T+  ++ 
Sbjct: 219 EMRNKGS------KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
             C    W +A+ LL +M+ +G  P+VV+ N+++N LC+ G +  A  +L+ M      P
Sbjct: 273 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 332

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N+ +YN L+ GFC   K++R  E    M S GC  D  +YN L+   CK+ +V+ A+ + 
Sbjct: 333 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 392

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           N+L  KG  P ++TYNT+  GL ++ + ERA+KL  EM+   +  D  TY + + GL
Sbjct: 393 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R      +PD+ TY+ILI   CK   V     +
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 216

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+  LI G+C E R+ EA      + ++GC+PNVIT+N ++  +C 
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M            P+ VT++I+I+ LC++G + +A ++  +M     
Sbjct: 277 TGRWMDAEKLLSDMLRKG------CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK+D A  
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 390

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK  R  +L   M   G K D  +Y+ L++G  
Sbjct: 391 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 450

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA+  +++L   GI+P  +TYN++  GL + RQ +RA+     M          
Sbjct: 451 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 510

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 511 TYTILIEGI 519



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 198/374 (52%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K+   D  L +  R+N   + PD+ TY+ ++   C  G++     +
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R L+    P+V+T+T LI+  C ES + +A  L  +++  G +P+V+TYN LING+C+
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+     M +         +PN +T++II+  +C  G    A++L   M  +  
Sbjct: 242 EGRLDEAIKFLNNMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 295

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++  CK  KMD A  
Sbjct: 296 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 355

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD+MV     P+  TYNTL+   C  GK++   E+   + S GC     +YN +I+G  
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + E A+ L +E+  KG+KP ++TY++L  GL    + + A+K F +++G  +  +  
Sbjct: 416 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 475

Query: 369 TYRTFIDGLCVRPQ 382
           TY + + GLC   Q
Sbjct: 476 TYNSIMLGLCKSRQ 489



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+    K       + L   + + G  PD+ TY++LIN  CK G++      
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV+T   +++ +C+  R ++A  L + +   GC P+V+T+N LIN LCR
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++ ++M            PN+++Y+ ++ G CKE  +D+A E    M     
Sbjct: 312 QGLLGRAIDILEKMPMHG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L+   C     + A  +L ++  +G  P +++ N +++ L K GK + A +
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M +  ++P+  TY++L+ G    GK++   + F  +E +G + +  +YN ++ G C
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+++ + A+     +  K  KPT  TY  L  G+     A+ AL L  E+
Sbjct: 486 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 6/322 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+     
Sbjct: 225 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 284

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR   +P+VVTF  LI  LC +  +  A  +  K+   GC PN ++YN L++G 
Sbjct: 285 KLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 344

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A+     M +          P+ VTY+ ++  LCK+G VD A E+  Q+  +
Sbjct: 345 CKEKKMDRAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P ++TY ++I G         A  LL EM  +G++P++++ + +++ L + GK+D A
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +    +    +RPNA TYN++M G C + + +R  +    M S  CK  + +Y ILI G
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518

Query: 307 YCKNKEVEEALSLYNELPFKGI 328
                  +EAL L NEL  +G+
Sbjct: 519 IAYEGLAKEALDLLNELCSRGL 540



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 6/220 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           MH   P   S+N LL    K K  D  +     + S G +PD+ TY+ L+   CK G+V 
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I  ++     +P ++T+ ++I GL    +   A  L  +++  G +P++ITY++L+
Sbjct: 387 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GL R G    A+  F ++       G+  +PN +TY+ I+ GLCK    D+A +    M
Sbjct: 447 SGLSREGKVDEAIKFFHDLE------GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 500

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
             +   P   TYT LI G  +     EA  LL E+  +G+
Sbjct: 501 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + G ++   +    M Y    P+++  TSLI GFC      +A  ++  +   G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V++ NV+++  CK+G++DNA ++LD M   +V P+  TYNT++   C +GK+ +  E+  
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                 C  D  +Y ILI   CK   V +A+ L +E+  KG KP VVTYN L +G+ +  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + A+K    M       +  T+   +  +C
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  L +NG++++  + L+ MV     P+     +L+ GFC  GK  +   +   +E  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +YN+LI+GYCK+ E++ AL + + +    + P VVTYNT+   L +  + ++A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +       +   D  TY   I+  C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATC 205


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 198/374 (52%), Gaps = 8/374 (2%)

Query: 2   RHMHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R +  +P PP+  FN LL  + + K Y+TV+SLFK +   G+  ++ T SILINCFC + 
Sbjct: 30  RMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLH 89

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V  GF +FG+ L+  F P+VV FT+LI G+C   +   AA L  ++   GC P+V+T N
Sbjct: 90  HVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCN 149

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +L+ G C  G       +F  M +         KP+  +YSI I+G CK   +D+A ELF
Sbjct: 150 SLMRGYCSQGKIDKVRKIFHLMVSKG------LKPDVYSYSIFINGYCKVEKIDEAMELF 203

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M +  + PN VTY +LI   C A    +A+ L  +M   G+ P++++ + +++  CK 
Sbjct: 204 DEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQ 263

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D    L   M +  V+P+   Y  +++G C + K+   KE+   +   G K D  +Y
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             L++G C+   + EAL L+ ++   G  P   +YN L  G  +       ++L  EM  
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383

Query: 361 NDVAADTCTYRTFI 374
               AD  T RTF+
Sbjct: 384 RGFYADAVT-RTFL 396



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 159/320 (49%), Gaps = 8/320 (2%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G +      F R+L     P ++ F  L+  +    +     +LF +++  G + NV T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 120 NTLINGLCRTGHTIVALNLF-KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           + LIN  C   H     ++F K +  G       FKP+ V ++ +IDG+C+ G  + A  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRG-------FKPDVVIFTTLIDGVCRIGKTELAAG 131

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L  +M      P+VVT  SL+ G+C     ++ + +   MV +G++P+V S ++ +N  C
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K+D A  L D M    V PNA TYNTL+   C   +    + LF  M + G   D  
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y+ L++G+CK   ++E L L+ E+  + +KP +V Y  + +G+   R+ + A ++   +
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               +  D  TY   +DGLC
Sbjct: 312 IVEGLKPDVHTYTALVDGLC 331



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 6/262 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+         D V  +F  + S GL PD+Y+YSI IN +CK+ ++     +
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VT+ +LIK LC   R  +A  LF K+ A G  P+++ Y+TL++G C+
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+    L LF+EM         + KP+ V Y+III+G+C+   V  AKE+  ++  E L
Sbjct: 263 QGNLDEMLVLFQEMQRR------LVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TYT+L+ G C      EA  L  +M + G  P   S NV++    ++       +
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQ 376

Query: 249 LLDLMVQCDVRPNAFTYNTLMD 270
           L+  M       +A T   L D
Sbjct: 377 LIHEMADRGFYADAVTRTFLKD 398



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 6/286 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A A F ++     +P +I +N L++ + R       ++LFKEM           K N  
Sbjct: 23  DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRG------IKYNVC 76

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T SI+I+  C    VD    +F +       P+VV +T+LI G C       A GLL EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G  P+VV+ N +M   C  GK+D   ++  LMV   ++P+ ++Y+  ++G+C   KI
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   ELF  M   G   +  +YN LI   C+     +A  L+ ++   G+ P ++ Y+TL
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             G  +    +  L LF EMQ   V  D   Y   I+G+C   +V+
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVK 302



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%)

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D+A    + M+  + +P    +N L+       K   V  LF  ME  G K++  + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +ILIN +C    V+   S++ +   +G KP VV + TL  G+  I + E A  L  EM  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                D  T  + + G C + ++
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKI 161



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            GY  N  +++AL+ +N +  +  +P ++ +N L   +  +++ E  + LF EM+   + 
Sbjct: 15  KGYFGN--LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIK 72

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
            + CT    I+  C    V + ++
Sbjct: 73  YNVCTLSILINCFCFLHHVDYGFS 96


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 197/372 (52%), Gaps = 13/372 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-V 67
           P V ++N L+  L K    +   ++ + +   G+ PD+ TYS+L++ FCK  +V     +
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGL 126
           + G   R C  PNVVTF S+I GLC   R  EA  +F  +    G  P+ ITY TLI+GL
Sbjct: 453 LHGMASRGC-TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGL 511

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            RTG    A  L   M +          P+T  ++  I+GL K G V +A +++ +M   
Sbjct: 512 FRTGRAGQAEALLDAMPD----------PDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+ VT+  LI G C A ++ +A  L  EMV + +QP+V++   +++ LCK G+++ A
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +LDLM    V PN  TYN L+ G C +G+I    +    M S GC  D  +Y  L+  
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C+    ++AL L +EL   G  P  VTYN L  GL++  Q E+A+ +  EM G     D
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 367 TCTYRTFIDGLC 378
             TY T ID LC
Sbjct: 742 VVTYNTLIDSLC 753



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 205/413 (49%), Gaps = 44/413 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K+      + LF+ L   G  PD+ TY+ LI+  CK G +     +
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE--PNVITYNTLINGL 126
            G +      PNVVT++ LI GLC   RI EA  L  ++    C+  PN+ITYN+ ++GL
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   T  A  L + + +G+  +     P+TVT+S +IDGLCK G +D+A  +F  M   
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRV----SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 389

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNV+TY +L++G C A+    A  ++  MVD+GV P+V++ +V+++  CK  ++D A
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH----------- 295
             LL  M      PN  T+N+++DG C   K +R  E F   + M  KH           
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLC---KSDRSGEAFQMFDDMALKHGLVPDKITYCT 506

Query: 296 ------------------------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
                                   D +++N  ING  K  +V  AL +YN +    + P 
Sbjct: 507 LIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPD 566

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            VT+N L  G  +    E+A  LF EM   ++  D  T+   IDGLC   QV 
Sbjct: 567 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 619



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 196/362 (54%), Gaps = 8/362 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFK-RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V+ +NI+L  L +       L +F+  +   G+ P + TY+ +IN  CK  ++  G  +F
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             ++     P+VVT+ +LI  LC    + EA  L   + +  C PNV+TY+ LINGLC+ 
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL- 188
           G    A  L +EMT  + ++     PN +TY+  +DGLCK+    +A EL   ++  +L 
Sbjct: 300 GRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355

Query: 189 -NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+ VT+++LI G C     +EA  +  +M+  G  PNV++ N ++N LCK  KM+ A 
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +++ MV   V P+  TY+ L+D FC   +++   EL   M S GC  +  ++N +I+G 
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475

Query: 308 CKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           CK+    EA  +++++  K G+ P  +TY TL  GLF   +A +A  L   M   D  A 
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAF 535

Query: 367 TC 368
            C
Sbjct: 536 NC 537



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 206/416 (49%), Gaps = 48/416 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FNIL+    K  +++   +LF+ + +  L PD+ T+  LI+  CK GQV     I
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNVVT+ +L+ GLC   RI EA     ++ + GC P+ ITY +L+  LCR
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  AL L  E+ +        + P+TVTY+I++DGL K G  ++A  +  +M  +  
Sbjct: 685 ASRTDDALQLVSELKSFG------WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGH 738

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEM---VDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +P+VVTY +LI   C A D  EA+ L  +M   V +   PNVV+ +V++N LCK G++D 
Sbjct: 739 HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDE 798

Query: 246 ASRLLDLMVQ--CDVRPNAFTYN------------------------------------- 266
           A  L+  M++  CDV PN  TYN                                     
Sbjct: 799 ARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFS 858

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+DG C  G+ +    +F  M + G   +  +YN+L+NG CK  ++E A ++   +  K
Sbjct: 859 TLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK 918

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           G+ P V+TY+ L     +    + AL+L   M       +  T+ + IDGLC   Q
Sbjct: 919 GVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 199/375 (53%), Gaps = 8/375 (2%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP V ++N L+  L K+   +      + + S G  PD  TY  L+   C+  +      
Sbjct: 634  PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 693

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +   +    + P+ VT+  L+ GL    +  +A  +  ++   G  P+V+TYNTLI+ LC
Sbjct: 694  LVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLC 753

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + G    A  L  +M++    +     PN VTYS++I+GLCK G +D+A+EL  +M  ++
Sbjct: 754  KAGDLEEARRLHGDMSS---RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKS 810

Query: 188  LN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKM 243
             +  PN++TY S + G C  +   EA  L+  + D    V P+ V+ + +++ LCK G+ 
Sbjct: 811  CDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 870

Query: 244  DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            D A  + D M+     PN  TYN LM+G C T K+ R   +  SM   G   D  +Y++L
Sbjct: 871  DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVL 930

Query: 304  INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GND 362
            ++ +CK   V+EAL L + +  +G  P VVT+N++  GL +  Q+  A ++F +M   + 
Sbjct: 931  VDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG 990

Query: 363  VAADTCTYRTFIDGL 377
            +A D  TY T IDGL
Sbjct: 991  LAPDKITYCTLIDGL 1005



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 191/366 (52%), Gaps = 10/366 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   ++  L+  L +    D  L L   L S G  PD  TY+IL++   K GQ      +
Sbjct: 670  PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITV 729

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF---GCEPNVITYNTLING 125
               ++     P+VVT+ +LI  LC    + EA  L   + +     C PNV+TY+ LING
Sbjct: 730  LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLING 789

Query: 126  LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            LC+ G    A  L +EM   + ++     PN +TY+  +DGLCK+  + +A EL   ++ 
Sbjct: 790  LCKVGRIDEARELIQEMMRKSCDV----LPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845

Query: 186  ENL--NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             +L  +P+ VT+++LI G C     +EA  +  +M+  G  PNVV+ NV+MN LCK  KM
Sbjct: 846  GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905

Query: 244  DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            + A  +++ MV   V P+  TY+ L+D FC    ++   EL   M S GC  +  ++N +
Sbjct: 906  ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI 965

Query: 304  INGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
            I+G CK+ +  EA  +++++  K G+ P  +TY TL  GLF    A +A  L   M   D
Sbjct: 966  IDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPD 1025

Query: 363  VAADTC 368
              A  C
Sbjct: 1026 TYAFNC 1031



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 204/420 (48%), Gaps = 52/420 (12%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   ++NIL+  L K+   +  +++ + +   G  PD+ TY+ LI+  CK G +     +
Sbjct: 705  PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 69   FG----RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE--PNVITYNTL 122
             G    R+ R C  PNVVT++ LI GLC   RI EA  L  ++    C+  PN+ITYN+ 
Sbjct: 765  HGDMSSRVSRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823

Query: 123  INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
            ++GLC+      A  L + + +G+  +     P+TVT+S +IDGLCK G  D+A  +F  
Sbjct: 824  LDGLCKQSMMAEACELMRSLRDGSLRV----SPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 183  MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
            M      PNVVTY  L++G C  +    A  ++  MVD+GV P+V++ +V+++  CK   
Sbjct: 880  MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 243  MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH------- 295
            +D A  LL  M      PN  T+N+++DG C   K ++  E F   + M  KH       
Sbjct: 940  VDEALELLHGMASRGCTPNVVTFNSIIDGLC---KSDQSGEAFQMFDDMTLKHGLAPDKI 996

Query: 296  ----------------------------DDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                                        D +++N  ING  K  +V  AL    EL    
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE--- 1053

Query: 328  IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            + P  VT+N L  G  +    E+A  LF EM   ++  D  T+   IDGLC   QV  T+
Sbjct: 1054 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 192/387 (49%), Gaps = 13/387 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN  +  L+K       L ++ R+  + L PD  T++ILI   CK G       +
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+V+TF +LI GLC   ++  A  +   +   G  PNV+TYN L++GLC+
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A    +EM +     G V  P+++TY  ++  LC+    D A +L  ++K    
Sbjct: 650 SGRIEEACQFLEEMVSS----GCV--PDSITYGSLVYALCRASRTDDALQLVSELKSFGW 703

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VTY  L+ G   +    +A  +L EMV +G  P+VV+ N +++ LCK G ++ A R
Sbjct: 704 DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763

Query: 249 LLDLMVQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK--HDDFSYNIL 303
           L   M     R   PN  TY+ L++G C  G+I+  +EL   M    C    +  +YN  
Sbjct: 764 LHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823

Query: 304 INGYCKNKEVEEALSLYNELPFKGIK--PTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ++G CK   + EA  L   L    ++  P  VT++TL  GL +  Q + A  +F +M   
Sbjct: 824 LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883

Query: 362 DVAADTCTYRTFIDGLCVRPQVRFTYA 388
               +  TY   ++GLC   ++   +A
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHA 910



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 171/342 (50%), Gaps = 10/342 (2%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           +++++  +N   K G  +    +F   L     PN  T+++L++        VE    F 
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           +        +V  YN ++  LCR G T  AL +F+     +G       P  VTY+ II+
Sbjct: 171 RRIRSS-SRSVADYNIVLQSLCRAGETARALEIFRGEMARDG-----VAPTIVTYNTIIN 224

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLCK   +    ELF ++     +P+VVTY +LI   C A D  EA+ L  +M  +   P
Sbjct: 225 GLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           NVV+ +V++N LCK G++D A  L+  M +  CDV PN  TYN+ +DG C         E
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 284 LFVSME--SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           L  S+   S+    D  +++ LI+G CK  +++EA S+++++   G  P V+TYN L +G
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +  + ERA  +   M    V  D  TY   +D  C   +V
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG-FCLTGKINR 280
           G +  + S N  +N L K+G    A  L    +    RPN FTY+TL+   +   G + R
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY-NELPFKGIKPTVVTYNTLF 339
               F  + S      D  YNI++   C+  E   AL ++  E+   G+ PT+VTYNT+ 
Sbjct: 166 TLGFFRRIRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +GL +  +    ++LF E+       D  TY T ID LC
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLC 262


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 214/412 (51%), Gaps = 32/412 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +NIL+   AK    D    L++ + S+GL P +YTY+ L+N FCK  ++     +
Sbjct: 41  PDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMEL 100

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLC 127
           F  +    F P+VVT++++I GLC   ++ EA   LF K+   GC  N + YN LINGLC
Sbjct: 101 FKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLC 160

Query: 128 RTGHTIVALNLFKEMTN---------------GNGEIGVV--------------FKPNTV 158
           +  +   A  L +EM +               G   +G V              + P+ V
Sbjct: 161 KDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+ ++D L KEG  D+A +LF  +  +   P+ VTY S++ G    ++ +EA+ +  +M
Sbjct: 221 AYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V  G  PN  + +++++  C+  K+D+A ++L+ M +    P+  TYN L+DG C T  +
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 340

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++  ELF +M   GC  D  SY++++NG CK  +V +A  L++ +  + + P VVT+N L
Sbjct: 341 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 400

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
             GL +  + + A  L  +M  +  A D   Y T ++GL  R Q R   A R
Sbjct: 401 MDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL--RKQGRHIQADR 450



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 203/376 (53%), Gaps = 7/376 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P   +F ++L    K         LF+++   G+ PD   Y+ILI+ + K G+V 
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               ++  ++     P++ T+ SL+   C E+++ EA  LF  +   G EP+V+TY+T+I
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 124 NGLCRTGHTIVALN-LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           +GLC+TG    AL  LF +M     E G     NTV Y+ +I+GLCK+  +++A +L  +
Sbjct: 121 SGLCKTGKVTEALEMLFHKMI----ERGC--SANTVAYNALINGLCKDENIERAYKLLEE 174

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  +   P+ +TY +++ G C     +EAK     M  +G  P+VV+ N +++ L K GK
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            D A +L   ++     P+  TYN+++ G      ++  +E+F  M + GC  +  +Y+I
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +++G+C+ K+V++A  +  E+   G  P VVTYN L  GL +    ++A +LF  M  N 
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354

Query: 363 VAADTCTYRTFIDGLC 378
            A D  +Y   ++GLC
Sbjct: 355 CAPDIVSYSVVLNGLC 370



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 167/315 (53%), Gaps = 6/315 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L K+++ +    L + + S G  PD  TY+ +++  C+MG+VS     F  +
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               ++P+VV +  L+  L  E +  EA  LF  + A G  P+ +TYN+++ GL R  + 
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +FK+M      +     PN  TYSI++ G C+   VD A ++  +M      P+V
Sbjct: 271 DEAEEMFKKM------VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDV 324

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY  L+ G C  N  ++A  L   MVD G  P++VS +V++N LCK  K+ +A  L D 
Sbjct: 325 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 384

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M++  + P+  T+N LMDG C  GK++  K+L   M   GC  D  +YN L+NG  K   
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444

Query: 313 VEEALSLYNELPFKG 327
             +A  L   +  KG
Sbjct: 445 HIQADRLTQAMKEKG 459



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 6/290 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L  L +          F  + S G  PD+  Y+ L++   K G+      +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++   + P+ VT+ S++ GL  +S + EA  +F K+ A GC PN  TY+ +++G CR
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + +EM+    +IG V  P+ VTY+I++DGLCK   VDKA ELF  M     
Sbjct: 302 AKKVDDAHKVLEEMS----KIGAV--PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V+Y+ +++G C  N  ++A+ L   M+++ + P+VV+ N++M+ LCK GK+D A  
Sbjct: 356 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           LLD M      P+   YNTLM+G    G+  +   L  +M+  G   D F
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 1/165 (0%)

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PN  +  V++   CK GK+ +  +L + M+   + P+   YN L+DG+   G+++    
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L+  M S+G +   ++YN L+N +CK  +++EA+ L+  +  KG +P VVTY+T+  GL 
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 344 EIRQAERALK-LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +  +   AL+ LF +M     +A+T  Y   I+GLC    +   Y
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAY 169



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/92 (19%), Positives = 45/92 (48%)

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           C  + +++ +++  +CK  ++ +   L+ ++   GI P  + YN L  G  +  + + A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +L+ EM    +     TY + ++  C   +++
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMK 95


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 201/376 (53%), Gaps = 9/376 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP V ++  ++  L K + +D    +F+++   G+ P+  TY+ LI+ +  +G+ 
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +  ++      P+  T+ SL+  LCA S   E  +    +   G  P+   +N  
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS---EMHSFLDLMVENGLSPDHHIFNIF 315

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
            +   + G    A+++F +M            PN V Y  +ID LCK G VD A+  F Q
Sbjct: 316 FSAYAKCGMIDKAMDIFNKMRQHG------LSPNVVNYGALIDALCKLGRVDDAEVKFNQ 369

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  E + PN+V + SL++G C  + W  A+ L+ EM+DQG+ PN V  N ++  LC  G+
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +    RL+DLM    VRP+AF+Y  L+ G+CL G+ +  +++F  M S+G    + +YN 
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L++GYC    +++A  L+ E+  KG+ P VVTYNT+ HGLF+ ++   A +L++ M  + 
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549

Query: 363 VAADTCTYRTFIDGLC 378
              D  TY   ++GLC
Sbjct: 550 TKCDIYTYNIILNGLC 565



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 198/390 (50%), Gaps = 21/390 (5%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDT-----------VLSLFKRLN---SIGLFPDLYTY 49
           +H  P  V +FN +L  +++                 V+SLF R+    SI + P+  TY
Sbjct: 42  IHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRECSIKVAPNTCTY 101

Query: 50  SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLK 108
           SILI C C+MG++   F  FG IL++ +  N +    L+KGLC   R+ EA   L  ++ 
Sbjct: 102 SILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMP 161

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             GC P+ ++Y+ L+ G C       AL L + M N +G       PN VTY+ +IDGLC
Sbjct: 162 ELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR---SCPPNVVTYTTVIDGLC 218

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           K    D+A+ +F QM    + PN  TY  LIHG+     W E   +L +M  +G++P+  
Sbjct: 219 KAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCY 278

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +   ++N LC   +M +    LDLMV+  + P+   +N     +   G I++  ++F  M
Sbjct: 279 TYGSLLNYLCALSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   +  +Y  LI+  CK   V++A   +N++  +G+ P +V +N+L +GL  + + 
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ERA +L  EM    +  +   + T I  LC
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLC 425



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 186/375 (49%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNI     AK    D  + +F ++   GL P++  Y  LI+  CK+G+V    V 
Sbjct: 307 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN+V F SL+ GLC   +   A  L  ++   G  PN + +NTLI  LC 
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 426

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +    L   M +    +GV  +P+  +Y+ +I G C  G  D+A+++F  M    L
Sbjct: 427 VGRVMEGRRLIDLMEH----VGV--RPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGL 480

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P  VTY +L+HG+C A+  ++A  L  EM+ +GV P VV+ N I++ L +  +   A  
Sbjct: 481 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 540

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+    + + +TYN +++G C +  ++   ++F S+ S G + +  ++ I+I    
Sbjct: 541 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    E+A+ L+  +P  G+ P VVTY  +   L E    E    LF  M+ N  A ++ 
Sbjct: 601 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 660

Query: 369 TYRTFIDGLCVRPQV 383
                +  L  R  +
Sbjct: 661 MLNALVRRLLHRGDI 675



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           GL PD + ++I  + + K G +     IF ++ +   +PNVV + +LI  LC   R+ +A
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              F ++   G  PN++ +N+L+ GLC       A  L  EM +     G+   PN V +
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ----GIC--PNAVFF 417

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I  LC  G V + + L   M++  + P+  +YT LI G+C A   +EA+ +   MV 
Sbjct: 418 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ P  V+ N +++  C   ++D+A  L   M++  V P   TYNT++ G   T + + 
Sbjct: 478 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 537

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            KEL+++M + G K D ++YNI++NG CK+  V+EA  ++  L  KG++  ++T+  +  
Sbjct: 538 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 597

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L +  + E A+ LF  +  N +  +  TYR   + L
Sbjct: 598 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 6/293 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L   +  +G+ PD ++Y+ LI+ +C  G+      +F  ++    +P  VT+ +L+ G C
Sbjct: 436 LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 495

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           + SRI +A  LF ++   G  P V+TYNT+++GL +T     A  L+  M N        
Sbjct: 496 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT----- 550

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            K +  TY+II++GLCK   VD+A ++F  +  + L  N++T+T +I          +A 
Sbjct: 551 -KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   +   G+ PNVV+  ++   L + G ++    L   M +    PN+   N L+   
Sbjct: 610 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 669

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
              G I+R       ++      +  + ++LI+ +  ++    A SL  +  F
Sbjct: 670 LHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPEKYHF 722



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN L+  L     ++    L   +   G+ P+   ++ LI   C +G+V  G  +
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++T LI G C   R  EA  +F  + + G  P  +TYNTL++G C 
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF+EM       GV   P  VTY+ I+ GL +     +AKEL+L M     
Sbjct: 497 ASRIDDAYCLFREMLRK----GVT--PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 550

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++ TY  +++G C +N  +EA  +   +  +G+Q N+++  +++  L K G+ ++A  
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 610

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +    + PN  TY  + +     G +     LF +ME  G   +    N L+    
Sbjct: 611 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 670

Query: 309 KNKEVEEALSLYNEL 323
              ++  A +  ++L
Sbjct: 671 HRGDISRAGAYLSKL 685


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+  +  L +N H D  L +   +   G  PD+YTYS +INC C  G++     I
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P+  TF +LI  LC E+++ EA  L  +L   G  PNV T+N LIN LC+
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A+ LF+EM +          P+ VTY+I+ID LC  G + KA +L  +M+    
Sbjct: 419 VGDPHLAVRLFEEMKSSG------CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGC 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTY ++I G C      EA+ +  +M   G+  N ++ N +++ LC   ++D+A+ 
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   ++PN  TYN+++  +C  G I++  ++  +M + G + D  +Y  LING C
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  + AL L   +  KG+KPT   YN +   LF       AL LF EM       D  
Sbjct: 593 KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAF 652

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 653 TYKIVFRGLC 662



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 198/368 (53%), Gaps = 12/368 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  LA+      + S +  ++S G+ PD+ T++ +I+  C+  Q     ++   + 
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               AP+  TFT+L++G   E  I  A  L  ++   GC P  +T N LING C+ G   
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL   ++      EI   F+P+ VT+S  ++GLC+ G VD A ++   M  E   P+V 
Sbjct: 284 DALGYIQQ------EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY+++I+  C+  +  EAKG++ +MVD G  P+  + N ++  LC   +++ A   LDL 
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEA---LDLA 394

Query: 254 VQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
            +  V+   PN +T+N L++  C  G  +    LF  M+S GC  D+ +YNILI+  C +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++ +AL L  E+   G   + VTYNT+  GL + R+ E A ++F +M    +  +  T+
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITF 514

Query: 371 RTFIDGLC 378
            T IDGLC
Sbjct: 515 NTLIDGLC 522



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L + +   T + + + ++S  + PD  T++ L+  F + G +     +
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+     +P  VT   LI G C   R+ +A     +  A G EP+ +T++T +NGLC+
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL +   M     E      P+  TYS +I+ LC  G +++AK +  QM     
Sbjct: 314 NGHVDHALKVLGLMLQEGCE------PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T+ +LI   C  N   EA  L  E+  +G+ PNV + N+++N LCK G    A R
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYN L+D  C +GK+ +  +L   ME  GC     +YN +I+G C
Sbjct: 428 LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLC 487

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +EEA  +++++   GI    +T+NTL  GL    + + A +L  +M    +  +  
Sbjct: 488 KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547

Query: 369 TYRTFIDGLC 378
           TY + +   C
Sbjct: 548 TYNSILTHYC 557



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 195/383 (50%), Gaps = 9/383 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F  L+    +    +  L L  R++ +G  P   T ++LIN +CK+G+V      
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             + +   F P+ VTF++ + GLC    +  A  +   +   GCEP+V TY+T+IN LC 
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M +     G +  P+T T++ +I  LC E  +++A +L  ++  + L
Sbjct: 349 NGELEEAKGIVNQMVDS----GCL--PDTTTFNTLIVALCTENQLEEALDLARELTVKGL 402

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV T+  LI+  C   D + A  L  EM   G  P+ V+ N++++ LC +GK+  A  
Sbjct: 403 SPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD 462

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M       +  TYNT++DG C   +I   +E+F  M+  G   +  ++N LI+G C
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC 522

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + +++A  L +++  +G++P  VTYN++     +     +A  +   M  N    D  
Sbjct: 523 NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVV 582

Query: 369 TYRTFIDGLCVRPQVRFTYARRK 391
           TY T I+GLC   + R T A  K
Sbjct: 583 TYATLINGLC---KARRTQAALK 602



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 13/371 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN L+  L      +  L L + L   GL P++YT++ILIN  CK+G   L   +
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+  LI  LC+  ++ +A  L  +++  GC  + +TYNT+I+GLC+
Sbjct: 429 FEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCK 488

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                 A  +F +M   G G        N +T++ +IDGLC    +D A EL  QM  E 
Sbjct: 489 RRRIEEAEEVFDQMDVTGIGR-------NAITFNTLIDGLCNAERIDDAAELVDQMISEG 541

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN VTY S++  +C   + ++A  +L  M   G + +VV+   ++N LCK  +   A 
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL  M    ++P    YN ++              LF  M  +G   D F+Y I+  G 
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661

Query: 308 CK-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVEMQGNDV 363
           C+    ++EA     E+   G  P   ++  L  GL  +   +   RA++L VE + N  
Sbjct: 662 CRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE-KANFR 720

Query: 364 AADTCTYRTFI 374
            +D    R ++
Sbjct: 721 ESDISAIRGYL 731



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 168/339 (49%), Gaps = 41/339 (12%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N   +  L+  L   S+I    + +T++ + G EP+V+T+NT+I+ LCR      A+ + 
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +EM++ +        P+  T++ +++G  +EG ++ A  L  +M     +P  VT   LI
Sbjct: 220 EEMSSCD------VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           +G+C      +A G + + +  G +P+ V+ +  +N LC+NG +D+A ++L LM+Q    
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+ +TY+T+++  C  G++   K +   M   GC  D  ++N LI   C   ++EEAL L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD------------- 366
             EL  KG+ P V T+N L + L ++     A++LF EM+ +    D             
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 367 ----------------------TCTYRTFIDGLCVRPQV 383
                                 T TY T IDGLC R ++
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRI 492



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 7/249 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K +  +    +F +++  G+  +  T++ LI+  C   ++     
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++     PN VT+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  AL L + M           KP    Y+ +I  L +      A  LF +M    
Sbjct: 593 KARRTQAALKLLRGMRMKG------MKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+  TY  +  G C       EA   L+EM D G  P   S  ++   L   G  D  
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYL 706

Query: 247 SRLLDLMVQ 255
            R ++L+V+
Sbjct: 707 IRAIELIVE 715



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 3/155 (1%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQCD--VRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           ++  L +    + A R+L+  +  D  + P+   Y  ++      G  + +K L   M  
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLY-NELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
            G +         I  Y + +  ++A  L  N+L   G++     YN L   L E  + +
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
                + EM    +  D  T+ T ID LC   Q R
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR 213


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FN L+  L K         LF ++   G+ P+L+T++I I   CK G +     +
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + R    P+VVT+ ++I GLC +SR+VEA     K+   G EPN  TYN++I+G C+
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  + K+           FKP+  TY  +++G C++G  D+A  +F     + L
Sbjct: 413 KGMVVDANRILKDAVFKG------FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++ Y +LI G C       A  L+ EM ++G +P++ + N+I+N LCK G + +A+ 
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+   +     P+ FTYNTL+DG+C   K++   EL   M S G   D  +YN L+NG C
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + EE + ++  +  KG  P ++TYNT+   L   ++   A+ L  EM+   +  D  
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646

Query: 369 TYRTFIDGLC 378
           ++ T I G C
Sbjct: 647 SFGTLITGFC 656



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 194/356 (54%), Gaps = 6/356 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D    LF  +    L PD+ T++ L++  CK G V     +F ++L+    PN+ TF   
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I+GLC E  +  A  L   +   G  P+V+TYNT+I GLCR    + A     +M NG  
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG- 395

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                F+PN  TY+ IIDG CK+G V  A  +     ++   P+  TY SL++GFC   D
Sbjct: 396 -----FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            ++A  +  + + +G++P+++  N ++  LC+ G +  A +L++ M +   +P+ +TYN 
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +++G C  G ++    L     + GC  D F+YN L++GYC+  +++ A+ L N +  +G
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + P V+TYNTL +GL +  ++E  +++F  M     A +  TY T I+ LC   +V
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKV 626



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD +TY  L+N FC+ G       +F   L     P+++ + +LIKGLC +  I+ A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK----PN 156
             L  ++   GC+P++ TYN +INGLC+ G           +++ N  IG        P+
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGC----------LSDANHLIGDAITKGCIPD 539

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY+ ++DG C++  +D A EL  +M  + + P+V+TY +L++G C      E   +  
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M ++G  PN+++ N I+  LC + K++ A  LL  M    + P+  ++ TL+ GFC  G
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 659

Query: 277 KINRVKELFVSMESM-GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            ++    LF  ME      H   +YNI+I+ + +   ++ AL L++E+   G  P   TY
Sbjct: 660 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTY 719

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             L  G  +     +  K  +E           T+   ++ LCV  +V+
Sbjct: 720 RVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 174/345 (50%), Gaps = 6/345 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F+R++     P +Y+Y+ ++N   + G  +    ++ R+       +V T+T  IK  C 
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCR 237

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             R   A  L   +   GC  N + Y T++ G    G    A  LF EM      +    
Sbjct: 238 TGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM------LECCL 291

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+  T++ ++  LCK+GFV +++ LF ++    + PN+ T+   I G C     + A  
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL  +  +G++P+VV+ N ++  LC+  ++  A   L  MV     PN FTYN+++DG+C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G +     +       G K D+F+Y  L+NG+C++ + ++A++++ +   KG++P+++
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            YNTL  GL +      AL+L  EM       D  TY   I+GLC
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC 516



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 137/263 (52%), Gaps = 7/263 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    +    D+ + L  R+ S G+ PD+ TY+ L+N  CK  +      I
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     APN++T+ ++I+ LC   ++ EA  L  ++K+ G  P+V+++ TLI G C+
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF+ M     E        T TY+III    ++  +  A  LF +MK    
Sbjct: 658 VGDLDGAYGLFRGM-----EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY  LI GFC   + N+    L+E +++G  P++ +   ++N LC   K+  A  
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVG 772

Query: 249 LLDLMVQCDVRPNAFTYNTLMDG 271
           ++ LMVQ D+ P+  T NT+ + 
Sbjct: 773 IIHLMVQKDIVPD--TVNTIFEA 793



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 22/341 (6%)

Query: 52  LINCFC-KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           L++ FC K   V +  +   +  +  F   + T+ S+++ L    +  E   L +++++ 
Sbjct: 89  LVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS- 147

Query: 111 GCEPNVITYNTLINGL--------CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
               N+   NTL+ G+         R G    A++ F+ M   N +      P+  +Y+ 
Sbjct: 148 ----NLD--NTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCD------PSVYSYNA 195

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I++ L + G+ ++A +++++MK + +  +V TYT  I  FC       A  LL  M   G
Sbjct: 196 IMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLG 255

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
              N V+   ++    + G  D A  L D M++C + P+  T+N L+   C  G +   +
Sbjct: 256 CFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESE 315

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF  +   G   + F++NI I G CK   ++ A+ L   +  +G++P VVTYNT+  GL
Sbjct: 316 RLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +   A +   +M       +  TY + IDG C +  V
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 209/378 (55%), Gaps = 6/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H   +   + + N+LL  L K   ++ +  +++ + S GL P + T+  LI+  C+ G
Sbjct: 137 MYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQG 196

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F  +      P V+ +T LI+GLC++++I EA ++   ++  G  PNV TYN
Sbjct: 197 DLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYN 256

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL++G C+  +   AL L+++M      +G    P+ VT+ I+IDGLCK G +  A+ LF
Sbjct: 257 TLMDGYCKLANAKQALRLYQDM------LGEGLVPDVVTFGILIDGLCKFGEMKAARNLF 310

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           + M   ++ PN+  Y SLI  +C   D +EA  L +E+    V P+V + ++++  LC  
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            + + A  + + M +  +  N+ TYN+L+DG C  GK+++  E+   M   G + +  ++
Sbjct: 371 SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + LI+GYCK + ++ A+ +Y+E+  K + P VVTY  +  G  +    + ALKL+ +M  
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD 490

Query: 361 NDVAADTCTYRTFIDGLC 378
           N +  +  T    +DGLC
Sbjct: 491 NGITPNCYTISCLLDGLC 508



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 192/351 (54%), Gaps = 19/351 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K  +    L L++ +   GL PD+ T+ ILI+  CK G++     +
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    PN+  + SLI   C    + EA ALF +L+ F   P+V TY+ LI GLC 
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  A N+F++MT      G++   N+VTY+ +IDG CKEG +DKA E+  QM    +
Sbjct: 370 VSRTEEAGNIFEKMTKE----GIL--ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+++LI G+C   +   A G+  EMV + + P+VV+   +++  CK G M  A +
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF---VSMESMGCKHD--------- 296
           L   M+   + PN +T + L+DG C  GKI+   ELF   +  ++  C  D         
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 297 -DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
              +Y  LI+G C++ +  +A+ L++++   G++P  V Y  +  GLF+++
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVK 594



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 21/182 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++    K       L L+  +   G+ P+ YT S L++  CK G++S    +
Sbjct: 460 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALEL 519

Query: 69  FGRILR----SC---------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F   +      C            N V +T+LI GLC + +  +A  LF+ ++ +G +P+
Sbjct: 520 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPD 579

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
            + Y  ++ GL +  + ++ L+   +M     + GV+  PN+  + I+ +   + GF+  
Sbjct: 580 EVIYVVMLRGLFQVKYILMMLH--ADML----KFGVI--PNSAVHVILCECYQESGFLKS 631

Query: 176 AK 177
           A+
Sbjct: 632 AQ 633



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 16/188 (8%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+  Y+++IH    +   + A+ LL ++V      N+V S+   +  C+       SRL 
Sbjct: 57  NIQLYSAIIHVLVGSKLLSHARYLLNDLVQ-----NLVKSHKPYHA-CQLA-FSELSRL- 108

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
                   + + FT N   +   +  K+  V+E       +G      + N+L+    K 
Sbjct: 109 --------KSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKT 160

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
              E    +Y E+   G+ P+V+T+ TL  G        RA ++F EM+   +      Y
Sbjct: 161 GRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVY 220

Query: 371 RTFIDGLC 378
              I GLC
Sbjct: 221 TILIRGLC 228


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 209/375 (55%), Gaps = 37/375 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP   FN +LG L K+KHY TVLSL +++   G+ P+L+  +ILI CFC++G        
Sbjct: 84  PPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLG-------- 135

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               L  C                   +I +A     KL A G   + ++Y TLI+GLC+
Sbjct: 136 ----LIPC-------------------QIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK 172

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  AL+L + +       G + + N V Y+ +I G+CK+  V+ A +L+ +M  + +
Sbjct: 173 VGETRAALDLLQRVD------GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI 226

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNVVTY++LI GF       +A  L  +++ + ++P+  + N++++  CK+ KM     
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  +M++  + P+  TYN+LMDG+CL  ++N  K +F +M   G   D  SYNILING+C
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 346

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K+V++A++L+NE+  K I P VVTYN+L  GL +  +   AL+L  +M    V  +  
Sbjct: 347 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 406

Query: 369 TYRTFIDGLCVRPQV 383
           TY + ID L    QV
Sbjct: 407 TYNSIIDALFKTHQV 421



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 121/246 (49%), Gaps = 21/246 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+      K  +T  S+F  +   G+ PD+ +Y+ILIN FCK+ +V     +
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+ SLI GL    RI  A  L  ++   G  PN++TYN++I+ L +
Sbjct: 358 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A+ L  +  +         +P+  TY+I+IDGLCK                E  
Sbjct: 418 THQVDKAIALITKFKDQG------IQPSMYTYTILIDGLCK---------------VEGY 456

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +  V TY  +IHGFC    ++EA  LL +M D    PN V+  + +  L  N + D A +
Sbjct: 457 DITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEK 516

Query: 249 LLDLMV 254
           L   M+
Sbjct: 517 LFREMI 522



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 4/229 (1%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K N ++YS           VD A  LF ++  +N  P    +  ++     +  ++    
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           L  +M  +G++PN+ + N+++   C+ G    ++  A    D +V      +  +Y TL+
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G C  G+     +L   ++    + +   YN +I G CK+K V +A  LY+E+  KGI 
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P VVTY+ L  G F + + + A+ LF ++   ++  D  T+   +DG C
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFC 276



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N ++  L K    D  ++L  +    G+ P +YTY+ILI+  CK+   
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE-- 454

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             G+ I            V T+  +I G C +    EA +L +K+K   C PN +TY   
Sbjct: 455 --GYDI-----------TVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEIT 501

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A  LF+EM
Sbjct: 502 IRSLLDNNENDKAEKLFREM 521


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 214/397 (53%), Gaps = 17/397 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++ N L+  LA++++Y    S+++R+  + + P   + S LI CF    +  LGF +
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +L+  F  NV     ++KGLC    + EA  L  ++      P++++YNTLINGLC+
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  EM     E    F PN+VT + ++DGLCK+G +D+A EL   MK +  
Sbjct: 192 AKKLKEAVGLLLEM-----EAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF 245

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +VV Y +LI GFC+  + +  K L  EM+ +G+  NVV+ + +++ LC+ G+   A+ 
Sbjct: 246 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 305

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M +  + P+  TY  L+DG C  G+     +L   M   G +  + +YN+L++G C
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAAD 366
           K   V +A  +   +  KG K  VVTYNTL  GL +  + + ALKLF  M  N+  +  +
Sbjct: 366 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425

Query: 367 TCTYRTFIDGLCVRPQVRFTYA-------RRKGNSGN 396
             T+   I GLC   + R T A        +KG+ GN
Sbjct: 426 VFTFNMLIGGLC--KEGRLTKAVKIHRKMVKKGSCGN 460



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 179/376 (47%), Gaps = 8/376 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  L K+      + L   +   G  P   TY++L++  CK G V  
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGC-EPNVITYNTL 122
            F I   ++      +VVT+ +L+KGLC + ++ EA  LF  +     C EPNV T+N L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC+ G    A+ + ++M    G  G     N VTY++++ G  K G + +A EL+ Q
Sbjct: 433 IGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQ 486

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +      PN  TY+ LI GFC     N AKGL  EM   G+ P +   N +M  LCK G 
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 546

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           ++ A  L   M   +  P+  ++NT++DG    G    VKEL + M  MG + D  +++ 
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 606

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN   K  E++EA S    +   G  P  + Y++L  GL         + L  +M    
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 363 VAADTCTYRTFIDGLC 378
              D     T +  LC
Sbjct: 667 TVLDRKIVSTILTCLC 682



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 162/322 (50%), Gaps = 31/322 (9%)

Query: 88  IKGLCAE--SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN- 144
           ++ LC +  S+  EA +LF     F   P+  T N L++ L R+ +  +A ++++ MT+ 
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 145 ------------------------GNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKA 176
                                   G G +G+V K     N    +I++ GLC+ G V +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             L  +M  ++++P++V+Y +LI+G C A    EA GLL+EM   G  PN V+   +M+ 
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK+G+MD A  LL+ M +     +   Y TL+ GFC  G ++R KELF  M   G   +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y+ L++G C+  + +EA ++ N +   GI P VVTY  L  GL +  +A  A+ L  
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M          TY   + GLC
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLC 365



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 52/386 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+LL  L K         + + +   G   D+ TY+ L+   C  G+V     +
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411

Query: 69  FGRIL--RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  +    +C  PNV TF  LI GLC E R+ +A  +  K+   G   N++TYN L+ G 
Sbjct: 412 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG-------------------- 166
            + G    A+ L+K++      + + F PN+ TYSI+IDG                    
Sbjct: 472 LKAGKIKEAMELWKQV------LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 167 ---------------LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
                          LCKEG +++AK LF +M   N  P+++++ ++I G   A D+   
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           K L ++MV+ G++P+ ++ + ++N L K G++D A   L+ MV     P+A  Y++L+ G
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP--FKGI- 328
               G    +  L   M + G   D    + ++   C + +  + + L   LP  F+G  
Sbjct: 646 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL---LPTFFQGTS 702

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKL 354
           +   ++ N L   L ++ Q+   L+L
Sbjct: 703 EGASISCNEL---LMQLHQSHPKLQL 725


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 212/408 (51%), Gaps = 41/408 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
            M    P + ++N ++  L K+   D    + + + + G+ PD   Y+ LI+ FCK+G +
Sbjct: 37  QMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNI 96

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + +F  + +    P+ + +T++I GLC   +++EA  +F K+ + G EP+ +TY TL
Sbjct: 97  QAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTL 156

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C++G    A +L  +M            PN VTY+ + DGLCK G VD A EL  +
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSG------LTPNVVTYTALADGLCKLGQVDTANELLHE 210

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEA------------------------------- 211
           M  + L  N+ TY SL++G C + +  +A                               
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270

Query: 212 ----KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
                 LL EM+D+G+QP V++ NV+MN  C +G +++  RLL  M++  + PN  TYN+
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LM  +C+   +    E++  M + G   D  +YNILI G+CK + ++EA  L+ E+  KG
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
              T  +YN++  G F+ ++   A +LF EM+   +AAD   Y  F+D
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 185/352 (52%), Gaps = 6/352 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ +YS +IN +C  G++     +   +      PN+ T+ S+I  LC   ++ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +  ++   G  P+ + Y TLI+G C+ G+   A  LF EM            P+ + Y
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR------IVPDFIAY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I GLC+ G + +A ++F +M    + P+ VTYT+LI G+C + +  +A  L  +MV 
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ PNVV+   + + LCK G++D A+ LL  M    ++ N  TYN+L++G C +G I +
Sbjct: 179 SGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQ 238

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +L   ME  G   D  ++  L++ YCK  E+ +A  L  E+  +G++PTV+T+N L +
Sbjct: 239 AVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMN 298

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           G       E   +L   M    +  +T TY + +   C+R  +R T    KG
Sbjct: 299 GFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKG 350



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 145/272 (53%), Gaps = 6/272 (2%)

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           +K  G  P+V++Y+T+ING C  G     L L +EM           KPN  TY+ II  
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG------LKPNLYTYNSIILL 54

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LCK G VD A+ +  +M  + + P+ V YT+LI GFC   +   A  L  EM  Q + P+
Sbjct: 55  LCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            ++   ++  LC+ GKM  A ++ + M    V P+  TY TL+DG+C +G++ +   L  
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   G   +  +Y  L +G CK  +V+ A  L +E+  KG++  + TYN+L +GL +  
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              +A+KL  EM+   +  DT T+ T +D  C
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC 266



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 35/237 (14%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK+    P+VV+Y+++I+G+C   +  +   L+ EM  +G++PN+ + N I+  LCK+GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME------------- 289
           +D+A R+L  M+   + P+   Y TL+DGFC  G I    +LF  ME             
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 290 ----------------------SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                                 S G + D+ +Y  LI+GYCK+ E+E+A SL+N++   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           + P VVTY  L  GL ++ Q + A +L  EM G  +  + CTY + ++GLC    +R
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 6/314 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K+   +   SL  ++   GL P++ TY+ L +  CK+GQV     +
Sbjct: 148 PDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANEL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N+ T+ SL+ GLC    I +A  L  +++  G  P+ IT+ TL++  C+
Sbjct: 208 LHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCK 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L +EM +         +P  +T++++++G C  G ++  + L   M  + +
Sbjct: 268 TGEMVKAHELLREMLDRG------LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGI 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY SL+  +C  N+      +   M  +GV P+  + N+++   CK   M  A  
Sbjct: 322 MPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWF 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +      A +YN+++ GF    KI+  +ELF  M   G   D   YN+ ++   
Sbjct: 382 LHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISY 441

Query: 309 KNKEVEEALSLYNE 322
               +E AL L +E
Sbjct: 442 GEGNMETALELCDE 455



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 6/245 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N L+  L K+ +    + L + +   G++PD  T++ L++ +CK G++     +  
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLR 279

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P V+TF  L+ G C    + +   L   +   G  PN  TYN+L+   C   
Sbjct: 280 EMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRN 339

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +      ++K M       GV+  P++ TY+I+I G CK   + +A  L  +M  +  N 
Sbjct: 340 NMRCTTEIYKGMCAR----GVM--PDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNL 393

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
              +Y S+I GF      +EA+ L  EM  +G+  +    N+ ++     G M+ A  L 
Sbjct: 394 TASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELC 453

Query: 251 DLMVQ 255
           D  ++
Sbjct: 454 DEAIE 458



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%)

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+  G   D  SY+ +INGYC   E+++ L L  E+  KG+KP + TYN++   L +  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            + A ++  EM    +  DT  Y T IDG C    ++  Y
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAY 100


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 198/380 (52%), Gaps = 14/380 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  ++   I+ G   KN   D  L   K +N   + PD++TY+ILI+  CK  +    
Sbjct: 222 PSPDAIAYNAIIHGHCRKN-DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKA 280

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++     P+ VTF S++ GLC   +   A +L   +    C P+  TYNTLI+G
Sbjct: 281 SEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+  +   A +L  E  +        F P+ VTYSI+ DGLCK G +D+A EL  +M  
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSG------FVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   PN+VTY +LI G C A+   +A  LL  +V  G  P+VV+  +I++ LCK G++D 
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A ++++ M++    P+  TY  LM+G C TG+++    +F  M S  C  D  +Y  L+N
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514

Query: 306 GYCKNKEVEEALSLYNELPFKGIK--PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           GYCK+   +EA  + +     GI+  P +  YN L  G  +  + +    +F +M     
Sbjct: 515 GYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGC 569

Query: 364 AADTCTYRTFIDGLCVRPQV 383
             +  TY   +DGLC   +V
Sbjct: 570 VPNIKTYNIVMDGLCKHGKV 589



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 191/395 (48%), Gaps = 37/395 (9%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N  L  L +N   D + ++F+R+   G  PD YTY ++I   C+M Q+   F +  +   
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV 188

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL----------------KAFGCE----- 113
             F P V  +T L +  C   R+ +A  +F  +                +   C+     
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEF 248

Query: 114 ----------PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
                     P+V TYN LI+GLC+   T  A  +  EM +     GV   P+TVT++ I
Sbjct: 249 LKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDR----GVT--PDTVTFNSI 302

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +DGLCK G  ++A  L   M   N  P+  TY +LI G C   + + AK L+ E V  G 
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+VV+ +++ + LCK G++D A  L+  M      PN  TYNTL+DG C   K  +  E
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L  S+ S G   D  +Y I+++G CK   +++AL +   +  +G  P+V+TY  L  GL 
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              + + A  +F EM   D  AD   Y + ++G C
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 517



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 195/397 (49%), Gaps = 27/397 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL   L K    D    L K ++  G  P+L TY+ LI+  CK  +    + +
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S F P+VVT+T ++ GLC E R+ +A  +   +   GC P+VITY  L+ GLCR
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483

Query: 129 TGHTIVALNLFKEMTNGNGEI--------------------------GVVFKPNTVTYSI 162
           TG    A ++FKEM + +                             G+   P    Y+ 
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNA 543

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++DG CKEG +D+   +F  M      PN+ TY  ++ G C     +EA   L  M   G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P+VVS N+I++ L K  K   A ++LD M+Q  + P+A TYNTLM  FC   + +   
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHG 341
            +  +M   G   D+ +YN LI+G  +   + +A  L +E+   G +     TYNT+   
Sbjct: 664 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 723

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L +    ++AL L   M G+ V A+T TY  FID LC
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 760



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 181/358 (50%), Gaps = 10/358 (2%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L + K   T +  F      G     +T +  +    + G       +F R+L + +AP+
Sbjct: 100 LQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPD 159

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
             T+  +IK LC  ++I +A  +  K K  G +P V  Y  L    C+TG    AL +F+
Sbjct: 160 SYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR 219

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            + +          P+ + Y+ II G C++   D A E   +M    + P+V TY  LI 
Sbjct: 220 NIPS----------PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID 269

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G C A+  ++A  +L EMVD+GV P+ V+ N IM+ LCK GK + A  LL +M + + RP
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRP 329

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  TYNTL+ G C    ++R K+L     S G   D  +Y+IL +G CK   ++EA  L 
Sbjct: 330 SCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 389

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            E+  KG  P +VTYNTL  GL +  + E+A +L   +  +    D  TY   +DGLC
Sbjct: 390 KEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 142/287 (49%), Gaps = 12/287 (4%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF-KEMTNGNGEIGVVFKPNTVTY 160
           A+F ++   G  P+  TY+ +I  LC+      A  +  K    G       FKP    Y
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRG-------FKPEVSVY 198

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +I+    CK G +  A E+F  +     +P+ + Y ++IHG C  ND + A   L EM +
Sbjct: 199 TILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           + V P+V + N++++ LCK  K D AS +L  MV   V P+  T+N++MDG C  GK  R
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L   M    C+    +YN LI+G CK + V+ A  L +E    G  P VVTY+ L  
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           GL +  + + A +L  EM G     +  TY T IDGLC   +    Y
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 187/372 (50%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+    K    D + ++F+ +   G  P++ TY+I+++  CK G+V   F  
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 595

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P+VV++  +I GL   S+  EA  +  ++   G  P+ +TYNTL+   C+
Sbjct: 596 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 655

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN- 187
                 A+ + K M      I     P+ VTY+ +I GL +   +  A EL  +M     
Sbjct: 656 EERFDDAVGILKNM------IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +     TY ++I   C      +A  L+  M   GV+ N V+ N+ ++ LCK G++D AS
Sbjct: 710 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-GCKHDDFSYNILING 306
            LL  M   D   +  +Y T++ G C   +++R  +L   M ++ G      ++N+LI+ 
Sbjct: 770 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 826

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + K K ++EAL+L   +  +G  P+V+TYN +   L ++ + ++A +LF EM    + A 
Sbjct: 827 FTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 886

Query: 367 TCTYRTFIDGLC 378
           + +Y   I GLC
Sbjct: 887 SVSYTVLIYGLC 898



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 9/363 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++  L K+   D      + ++S G  PD+ +Y+I+I+   K  +      +
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++++   P+ VT+ +L+   C E R  +A  +   +   G +P+ +TYNTLI+GL +
Sbjct: 631 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 690

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A  L  EM       G V    T TY+ IID LCKEG + +A  L   M    +
Sbjct: 691 TNRLGDAYELMHEMLRN----GCVVSACT-TYNTIIDRLCKEGCLKQALLLMDHMTGHGV 745

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY   I   C     +EA  LL EM    ++  V  + VI+  LCK  ++D AS+
Sbjct: 746 EANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIG-LCKAEQLDRASK 802

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           L   MV    +   + T+N L+D F  T +++    L   M   GC     +YN++I   
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V++A  L++E+  +GI  + V+Y  L +GL    + + AL++  EM  +D   D 
Sbjct: 863 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 922

Query: 368 CTY 370
             +
Sbjct: 923 LKW 925



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 11/296 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N L+    K + +D  + + K +   G+ PD  TY+ LI+   +  ++   + 
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699

Query: 68  IFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +   +LR+ C      T+ ++I  LC E  + +A  L   +   G E N +TYN  I+ L
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KY 185
           C+ G    A +L  EM     E         V+Y+ +I GLCK   +D+A +L  +M   
Sbjct: 760 CKEGRLDEASSLLSEMDTLRDE---------VSYTTVIIGLCKAEQLDRASKLAREMVAV 810

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L     T+  LI  F      +EA  LL  MV +G  P+V++ N+++  LCK  K+D 
Sbjct: 811 KGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDK 870

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           A  L D M    +  ++ +Y  L+ G C  G+     ++   M S  C+ DD  + 
Sbjct: 871 AWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 10/286 (3%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G + +  T N  +  L   G +     +F+ M +        + P++ TY ++I  LC+ 
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAG------YAPDSYTYHLVIKSLCQM 173

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             +DKA  +  + K     P V  YT L   FC      +A    +E+      P+ ++ 
Sbjct: 174 NQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA----LEIFRNIPSPDAIAY 229

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N I++  C+    D A   L  M +  V P+ FTYN L+DG C   K ++  E+   M  
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D  ++N +++G CK  + E A SL   +  +  +P+  TYNTL  GL + +  +R
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           A  L  E   +    D  TY    DGLC R ++   +   K  SG 
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 208/397 (52%), Gaps = 40/397 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +   +P+PP +  FN +LG L K+KHY TVL L +++   G+ P+L   +ILIN FC++G
Sbjct: 53  LLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLG 111

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI----------VEAAALFTKLKAF 110
            +   F +  +IL+  + PN +T  +LIKGLC   +I           +A  LF K+   
Sbjct: 112 HIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILE 171

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------ 152
              P+V T+  L++G C+ G    A N+   M     + GVV                  
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231

Query: 153 -----------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                        P+  +YSI+I+G CK   +D+A EL  +M ++ + PNVVTY+SLI G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C +   + A  L+ EM D+G  PN+V+ + I++ LCKN ++DNA  LL  M    ++PN
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            +TY  L+ G C +GK+   +++F  +   G   + ++Y ++I G+C     +EAL+L +
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLS 411

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++   G  P   TY  +   LF+  + E A KL  EM
Sbjct: 412 KMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 155/316 (49%), Gaps = 31/316 (9%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+L+    P  + F  ++  L           L  K++  G +PN++  N LIN  C
Sbjct: 49  LFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFC 108

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   A ++  ++      + + +KPNT+T + +I GLC  G +              
Sbjct: 109 QLGHIPSAFSVLTKI------LKMGYKPNTITLNTLIKGLCLNGKIHDKH---------- 152

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
                          C      +A  L  +M+ + + P+V +  ++++  CK G++  A 
Sbjct: 153 ---------------CIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAK 197

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M+   ++P   TYN+LMDG+ L  ++N+ K +F +M  +G   D  SY+ILING+
Sbjct: 198 NVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGF 257

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK K ++EA+ L  E+  K I P VVTY++L  GL +  +   ALKL  EM       + 
Sbjct: 258 CKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNI 317

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + +D LC   QV
Sbjct: 318 VTYSSILDALCKNHQV 333



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 6/268 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+      K  +   S+F  +  +G+ PD+ +YSILIN FCK+  +     +
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNVVT++SLI GLC   +I  A  L  ++   G  PN++TY+++++ LC+
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  +M N         +PN  TY+I+I GLC+ G ++ A+++F  +  +  
Sbjct: 330 NHQVDNAIALLTQMKNQG------IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N NV TYT +I GFC    ++EA  LL +M D G  PN  +  +I+  L K  + + A +
Sbjct: 384 NLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEK 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           LL  M++ +        N L+    +TG
Sbjct: 444 LLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 16/262 (6%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A++LF  +   N        P  + ++ I+  L K         L  +M++  + PN+V 
Sbjct: 46  AVSLFNRLLQQNPT------PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK----------MD 244
              LI+ FC       A  +L +++  G +PN ++ N ++  LC NGK          + 
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLK 159

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  L + M+  ++ P+ +T+  L+DGFC  G++   K +   M   G K    +YN L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GY   K+V +A S++N +   G+ P + +Y+ L +G  +I+  + A++L  EM    + 
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 365 ADTCTYRTFIDGLCVRPQVRFT 386
            +  TY + IDGLC   ++ + 
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYA 301



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 6/241 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++IL+    K K  D  + L K ++   + P++ TYS LI+  CK G++S    +
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN+VT++S++  LC   ++  A AL T++K  G +PN+ TY  LI GLC+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  +F+++      +      N  TY+++I G C +G  D+A  L  +M+    
Sbjct: 365 SGKLEDARKVFEDLLVKGHNL------NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGC 418

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY  +I      ++   A+ LL EM++      V  +N ++  +   G     S 
Sbjct: 419 IPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSL 478

Query: 249 L 249
           L
Sbjct: 479 L 479



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + +++ +L  L KN   D  ++L  ++ + G+ P++YTY+ILI   C+ G++
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKL 368

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L      NV T+T +I+G C +    EA  L +K++  GC PN  TY  +
Sbjct: 369 EDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII 428

Query: 123 INGLCRTGHTIVALNLFKEM--TNGNGEIGVVFKPNTVTYSIIIDG-------LCKE 170
           I  L +     +A  L  EM  TN +G + +    N +  SI + G       LCK+
Sbjct: 429 ILSLFKKDENEMAEKLLCEMIETNFDGRVALT---NDLIASIWVTGSSPGNSLLCKK 482



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 102/257 (39%), Gaps = 45/257 (17%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + GFV  +K+        N + N + Y S    F + ND ++A  L   ++ Q   P 
Sbjct: 2   LLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPP 61

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            +  N I+  L K+        L   M    ++PN    N L++ FC  G I     +  
Sbjct: 62  NIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLT 121

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEV----------EEALSLYNELPF----------- 325
            +  MG K +  + N LI G C N ++          ++A+ L+N++             
Sbjct: 122 KILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181

Query: 326 ------------------------KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
                                   +GIKP VVTYN+L  G F ++Q  +A  +F  M   
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241

Query: 362 DVAADTCTYRTFIDGLC 378
            V+ D  +Y   I+G C
Sbjct: 242 GVSPDIQSYSILINGFC 258


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 214/385 (55%), Gaps = 9/385 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++G   K K  D    L + +   GL P+L TY+++IN  C++G++     +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R  FAP+ VT+ +L+ G C      +A  L +++   G  P+V+TY +LIN +C+
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G+   A+  F +M   G        +PN VTY+ +I+G  ++GF+D+A  ++ +M    
Sbjct: 356 AGNLNRAMEFFDQMHVRG-------LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P +VTY +L++G C +    EA GLL  M  +G+ P+VVS + I+   C+  ++D A 
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++   MV+  V P+A TY++L+ G C   ++N   +LF  M +     D+F+Y  LINGY
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  ++ EAL+L++E+  KG  P  VTYN L +GL +  +   A +L +++  ++   + 
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 368 CTYRTFIDGLCVRPQVRFTYARRKG 392
            TY T I+  C   + +   A  KG
Sbjct: 589 ITYDTLIES-CSDIEFKSVVALIKG 612



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V S+N +L  + +  K       +++ + + G+  ++++Y+ILI  FC  G + +G  
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F  + R+   PNVVT+ ++I   C   RI EA  L   +   G EPN++TYN +INGLC
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G       +  EM          F P+ VTY+ +++G CK G   +A  L  +M    
Sbjct: 285 RVGRIEETSGVLAEMDRKG------FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVTYTSLI+  C A + N A     +M  +G++PN V+   ++N   + G MD A 
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+ D M++    P   TYN L++G C++G++     L   ME  G   D  SY+ +I G+
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ +E++ A  +  E+  KG+ P  +TY++L  GL E R+   A  LF EM    +  D 
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518

Query: 368 CTYRTFIDGLC 378
            TY + I+G C
Sbjct: 519 FTYTSLINGYC 529



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 190/351 (54%), Gaps = 21/351 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++  L+  + K  + +  +  F +++  GL P+  TY+ LIN F + G +   + 
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I+  ++RS F P +VT+ +L+ G C   R+ EA  L   ++  G  P+V++Y+T+I G C
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFC 459

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R      A  +  EM     E GV   P+ +TYS +I GLC++  +++A +LF +M  ++
Sbjct: 460 RYQELDRAFQMNAEMV----EKGV--SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TYTSLI+G+C   D NEA  L  EM+ +G  P+ V+ NV++N L K  +   A 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 248 RLLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSMESMG 292
           RLL  +   +  PN  TY+TL++               GFC+ G +N   ++F SM    
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
            K ++  YN++I+G+C++  V +A  LY E+   G  P  VT   L   L+
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALY 684



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 155/324 (47%), Gaps = 31/324 (9%)

Query: 86  SLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIV-ALNLFKEM- 142
            L+   C+    +E A     L K  G  P V++YN +++ + R    ++ A  +++EM 
Sbjct: 136 DLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMI 195

Query: 143 -------------------TNGNGEIGVVF---------KPNTVTYSIIIDGLCKEGFVD 174
                                GN E+G+ F          PN VTY+ +I   CK   +D
Sbjct: 196 ASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRID 255

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           +A +L   M  E L PN++TY  +I+G C      E  G+L EM  +G  P+ V+ N ++
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           N  CK G    A  L   M++  + P+  TY +L++  C  G +NR  E F  M   G +
Sbjct: 316 NGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR 375

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +Y  LING+ +   ++EA  +++E+   G  PT+VTYN L +G     + E A+ L
Sbjct: 376 PNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGL 435

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M+G  ++ D  +Y T I G C
Sbjct: 436 LRGMEGKGLSPDVVSYSTIIAGFC 459



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 162/340 (47%), Gaps = 23/340 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N LL     +   +  + L + +   GL PD+ +YS +I  FC+  ++   F 
Sbjct: 410 PPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQ 469

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++    +P+ +T++SLI+GLC + R+ EA  LF ++      P+  TY +LING C
Sbjct: 470 MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYC 529

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    ALNL  EM      I   F P+TVTY+++I+GL K+    +AK L L++ Y+ 
Sbjct: 530 KEGDLNEALNLHDEM------IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583

Query: 188 LNPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
             PN +TY +LI                GFC     NEA  +   M+ +  +PN    NV
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           I++  C++G +  A +L   MV     P+  T   L+      G ++    L +      
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRS 702

Query: 293 CKHDDFSYN-ILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           CK  D   +  L+    K   ++   +L  E+   G  P+
Sbjct: 703 CKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 21/305 (6%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+    P   ++  L+   ++    D    ++  +   G  P + TY+ L+N  C  G++
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +   +     +P+VV+++++I G C    +  A  +  ++   G  P+ ITY++L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC       A +LF+EM N +        P+  TY+ +I+G CKEG +++A  L  +
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKS------LLPDEFTYTSLINGYCKEGDLNEALNLHDE 543

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE------ 236
           M  +   P+ VTY  LI+G        EAK LL+++      PN ++ + ++        
Sbjct: 544 MIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEF 603

Query: 237 ---------LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                     C  G M+ A ++ + M++ + +PN   YN ++ G C  G +++  +L+  
Sbjct: 604 KSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663

Query: 288 MESMG 292
           M   G
Sbjct: 664 MVDFG 668



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 1/224 (0%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGL 214
           ++  + +++       F++KA  +    K     P V++Y +++            A+ +
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             EM+  GV  NV S N+++   C  G ++   R  + M +    PN  TYNT++  +C 
Sbjct: 191 YREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK 250

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             +I+   +L  SM   G + +  +YN++ING C+   +EE   +  E+  KG  P  VT
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           YNTL +G  ++    +AL L  EM  N +  D  TY + I+ +C
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 11/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L          SL +++ + G  P+L T+ ++I   CK G++   F +
Sbjct: 134 PNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRV 193

Query: 69  FGRI--LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              +  + S  +P+V+TF S++ GLC E RI++A  +F +    GC PNV+TY+TLI+GL
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            +      AL L  +M     E+G   + NTVTYS ++DGL K G ++ A  +  QM+  
Sbjct: 254 SKMAKMDEALQLLAKMV----ELGC--RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+ VTY +LI GF       EA GLL EM++ G  P+VV+   + + LC++G+ D A
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILI 304
             +LD M      PNA TY++++DG C  G++      F  M  + +   H   +Y+ LI
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV-IAYSALI 426

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G CK  +++EA      +   G  P VVT++ L +GL +  + +  L+LF  M      
Sbjct: 427 DGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV 486

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            D  TY T +D LC   +V
Sbjct: 487 PDMVTYATLVDRLCRASRV 505



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 199/375 (53%), Gaps = 13/375 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K +       LF+   + G  P + TY+ +I+  CK G++     +
Sbjct: 28  PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  + +   F P VVT+++LI GLC +  + +   L  ++   GC PN +TYNTL+N L 
Sbjct: 88  YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA----KELFLQM 183
             G +  A +L ++M   NG       P  +T+ +II GLCKEG ++ A     E+F  M
Sbjct: 148 GQGRSKEAFSLLEQMA-ANG-----CPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--M 199

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+V+T+ S++ G C      +A  +    +++G +PNVV+ + +++ L K  KM
Sbjct: 200 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 259

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A +LL  MV+   R N  TY+T++DG    G++     +   M   GC  D  +YN L
Sbjct: 260 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 319

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+ K + + EA+ L  E+   G  P+VVTY TL HGL    + + A+++   M     
Sbjct: 320 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379

Query: 364 AADTCTYRTFIDGLC 378
           A +  TY + +DGLC
Sbjct: 380 APNAITYSSIVDGLC 394



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 185/335 (55%), Gaps = 7/335 (2%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +I+  CK  +V     +F +++     P+VVT+ +LI GL  + R+ EA  LF + +A G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C P V+TYNT+I+GLC+ G    AL L+ +M      I   F+P  VTYS +IDGLC++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMA-----IHFGFRPTVVTYSTLIDGLCRDH 115

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            VDK  +L  +M      PN VTY +L++         EA  LL +M   G  P +++  
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175

Query: 232 VIMNELCKNGKMDNASRLLD--LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
           +I+  LCK G+++ A R++D   M++  + P+  T+N+++DG C   +I     +F    
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 235

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             GC+ +  +Y+ LI+G  K  +++EAL L  ++   G +   VTY+T+  GL ++ + E
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            A+ +  +M+      D  TY T IDG   R ++R
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 184/347 (53%), Gaps = 7/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN +L  L K +      ++FKR    G  P++ TYS LI+   KM ++     +
Sbjct: 206 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++      N VT+++++ GL    R+ +A  +  +++  GC P+ +TYNTLI+G  +
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L +EM          F P+ VTY+ +  GLC+ G  D+A E+   M     
Sbjct: 326 RQRLREAVGLLREMLEAG------FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            PN +TY+S++ G C A    EA G   +M  D+ V P+V++ + +++ LCK GK+D A 
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L+ M++    P+  T++ L++G C  G+I+   ELF  M   GC  D  +Y  L++  
Sbjct: 440 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           C+   V+EA  L+ ++   G+ P   T  T+ HGL E+ + E A ++
Sbjct: 500 CRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 7/315 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L+K    D  L L  ++  +G   +  TYS +++   K+G++    V+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +   P+ VT+ +LI G     R+ EA  L  ++   G  P+V+TY TL +GLCR
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           +G    A+ +   M            PN +TYS I+DGLCK G V +A   F +M + E 
Sbjct: 361 SGRFDEAVEILDYMAARG------CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+V+ Y++LI G C A   +EA   L  M+  G  P+VV+ ++++N LC  G++D   
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M +    P+  TY TL+D  C   +++   +LF  M S G   D  +   +I+G 
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534

Query: 308 CKNKEVEEALSLYNE 322
            +    E+A  + +E
Sbjct: 535 LEVNRDEDAKRIQDE 549


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 7/383 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H      S++N L+    K  +    L++++ +   GL PD YT+++L+N F K  +V  
Sbjct: 83  HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDS 142

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +     +PNV+T++ LI  +C    + +A  +F  +K+ GC PN+ TY ++I+
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL ++GH   A  LF+EMT+     G+V     V Y+ +I GL + G  D A +LF +M 
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSE----GLV--ATRVVYNSLIHGLGRSGRADAAAKLFREML 256

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+ VT+TSL++G   A   +EA+ +  E  D G   +V   NV+++ LCK+ ++D
Sbjct: 257 SKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLD 316

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +   + +  + P+ +T+N LMDG C +G+I+    L   M+  GC  D   YN LI
Sbjct: 317 EAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI 376

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  K+  VEEA  L  E+   G +P VVTYNTL     +  + E AL+LF E+      
Sbjct: 377 DGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF- 435

Query: 365 ADTCTYRTFIDGLCVRPQVRFTY 387
           A+T TY T ++GLC+  +V   Y
Sbjct: 436 ANTVTYNTILNGLCMAGRVDEAY 458



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 197/372 (52%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+    K K  D+V  LF+ + +    P++ TYSILI+  CK G V     +
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV 181

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN+ T+TS+I GL     + +A  LF ++ + G     + YN+LI+GL R
Sbjct: 182 FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGR 241

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  LF+EM +         +P+ VT++ ++ GL   G   +A+ +F + +    
Sbjct: 242 SGRADAAAKLFREMLSKG------LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V  Y  LI   C +   +EA  +  E+ + G+ P+V + N +M+ LCK+G++ +A  
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    P+   YNTL+DG   +G++    +L + M+S+G + D  +YN LI+  C
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--- 365
           K   +E+AL L+ E+  KG   T VTYNT+ +GL    + + A KLF  M+   V     
Sbjct: 416 KGGRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVID 474

Query: 366 -DTCTYRTFIDG 376
            D  TY T ++G
Sbjct: 475 PDFVTYTTLLNG 486



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 178/344 (51%), Gaps = 14/344 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+  + K    +  L +F  + S G  P+++TY+ +I+   K G V   F +
Sbjct: 157 PNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFL 216

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +         V + SLI GL    R   AA LF ++ + G +P+ +T+ +L+ GL  
Sbjct: 217 FEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGV 276

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F+E  +    +G     N   Y+++ID LCK   +D+A E+F +++ + L
Sbjct: 277 AGRASEARRIFQEARD----VGCALDVN--LYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +L+ G C +   ++A  LL +M   G  P+V   N +++ L K+G+++ A +
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M      P+  TYNTL+D  C  G+I     LF  + + G  +   +YN ++NG C
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFAN-TVTYNTILNGLC 449

Query: 309 KNKEVEEALSLYNELPFKG----IKPTVVTYNTLFHGLFEIRQA 348
               V+EA  L+N +  +     I P  VTY TL +G    RQA
Sbjct: 450 MAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG---ARQA 490



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 159/333 (47%), Gaps = 31/333 (9%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    P +  F  L +G  +   + ++     +++   C      YN+LI+   + G+T 
Sbjct: 49  RYILQPRI--FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQ 106

Query: 134 VALNLFKEMTNGN------------------GEIGVVFK-----------PNTVTYSIII 164
            AL +++ M                        +  V+K           PN +TYSI+I
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILI 166

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           D +CK G V+KA ++FL MK     PN+ TYTS+I G   +   ++A  L  EM  +G+ 
Sbjct: 167 DAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
              V  N +++ L ++G+ D A++L   M+   ++P+  T+ +L+ G  + G+ +  + +
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F     +GC  D   YN+LI+  CK+K ++EA  ++ EL   G+ P V T+N L  GL +
Sbjct: 287 FQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCK 346

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +   A  L  +M+      D   Y T IDGL
Sbjct: 347 SGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 116/225 (51%), Gaps = 2/225 (0%)

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           G    G ++K+ E   +M+          Y SLI  F  A    +A  +   M   G++P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  + NV+MN   K  ++D+  +L + M   +  PN  TY+ L+D  C  G + +  ++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           + M+S GC+ + F+Y  +I+G  K+  V++A  L+ E+  +G+  T V YN+L HGL   
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            +A+ A KLF EM    +  D  T+ + + GL V    R + ARR
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAG--RASEARR 285



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++P  F    L  G+   G + +  E    ME   C     +YN LI+ + K    ++AL
Sbjct: 52  LQPRIFI--ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++Y  +   G++P   T+N L +   + ++ +   KLF EMQ  + + +  TY   ID +
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 378 C 378
           C
Sbjct: 170 C 170


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 205/384 (53%), Gaps = 9/384 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFK-RLNSIGLFPDLYTYSILINCFCKMGQV 62
           +  S   V+ +NI+L  L +       L +F+  +   G+ P + TY+ +IN  CK  ++
Sbjct: 38  VRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNEL 97

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             G  +F  +++    P+VVT+ +LI  LC    + EA  L   + + GC PNV+TY+ L
Sbjct: 98  GAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVL 157

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G    A  L +EMT  + ++     PN +TY+  +DGLCK+    +A EL   
Sbjct: 158 INGLCKVGRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 183 MKYENL--NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           ++  +L  +P+ VT+++LI G C     +EA     +M+  G  PNVV+ N ++N LCK 
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKA 271

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            KM+ A  +++ MV   V P+  TY+ L+D FC   +++   EL   M S GC  +  ++
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +I+G CK+    EA  +  ++  + + P  VT+N L  G  +    E+A  LF EM  
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
            ++  D  T+   IDGLC   QV 
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVE 415



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 198/372 (53%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K+      + LF+ L   G  PD+ TY+ LI+  CK G +     +
Sbjct: 79  PTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRL 138

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE--PNVITYNTLINGL 126
            G +      PNVVT++ LI GLC   RI EA  L  ++    C+  PN+ITYN+ ++GL
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   T  A  L + + +G+  +     P+TVT+S +IDGLCK G  D+A      M   
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRV----SPDTVTFSTLIDGLCKCGQTDEACND--DMIAG 252

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNVVTY +L++G C A+    A  ++  MVD+GV P+V++ +V+++  CK  ++D A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             LL  M      PN  T+N+++DG C + +     ++ + + +     D  ++NILI G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK    E+A +L+ E+  K ++P V+T+  L  GL +  Q E A  +   M    V  +
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432

Query: 367 TCTYRTFIDGLC 378
             TY   + GLC
Sbjct: 433 VVTYNVLVHGLC 444



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 188/371 (50%), Gaps = 10/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + ++N  L  L K         L + L   S+ + PD  T+S LI+  CK GQ     
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA- 244

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                ++   + PNVVT+ +L+ GLC   ++  A A+   +   G  P+VITY+ L++  
Sbjct: 245 -CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      AL L   M +          PN VT++ IIDGLCK     +A ++ LQ+   
Sbjct: 304 CKASRVDEALELLHGMASRG------CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR 357

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+ VT+  LI G C A ++ +A  L  EMV + +QP+V++   +++ LCK G+++ A
Sbjct: 358 MLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAA 417

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +LDLM    V PN  TYN L+ G C +G+I    E    M S GC  +  +Y  L+  
Sbjct: 418 RDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA 477

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C+    ++AL L ++L   G  P  VTYN L  GL++  + E+A+ +  EM G     D
Sbjct: 478 LCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537

Query: 367 TCTYRTFIDGL 377
           + T+     GL
Sbjct: 538 SFTFAACFGGL 548



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 192/367 (52%), Gaps = 8/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L K    D   +    + + G  P++ TY+ L+N  CK  ++     +
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V+T++ L+   C  SR+ EA  L   + + GC PNV+T+N++I+GLC+
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +  +  A  +  ++ N       +  P+ VT++I+I G CK G  ++A  LF +M  +N+
Sbjct: 341 SDRSGEAFQIALQVYNR------MLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+T+ +LI G C A     A+ +L  M + GV PNVV+ NV+++ LCK+G+++    
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCE 454

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ MV     P + TY +L+   C   + +   +L   ++S G   D  +YNIL++G  
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLW 514

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ + E+A+++  E+  KG +P   T+   F GL         ++L   +    +  D  
Sbjct: 515 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDAT 574

Query: 369 TYRTFID 375
           T  + +D
Sbjct: 575 TCSSILD 581



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N+L+  L K+   +      + + S G  P+  TY  L+   C+  +      
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++    + P+ VT+  L+ GL    +  +A  +  ++   G +P+  T+     GL 
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH 549

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           R+G+    + L + +      +     P+  T S I+D
Sbjct: 550 RSGNLAGTMELLRVV------LAKGMLPDATTCSSILD 581


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 205/377 (54%), Gaps = 8/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N +L  L+ +    +   L   +   G+ P++YTY+IL+   C  GQ      +
Sbjct: 118 PSLLAYNAVLLALS-DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            G  +R    APNVVT+ +L+   C    +  A  L   ++  G  P+++T+NT++NGLC
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  +F EM            P+ V+Y+ ++ G CK G + +A  +F +M  + 
Sbjct: 237 KAGRMEDARKMFDEMAREG------LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VVT+TSLIH  C A +   A  L+ +M ++G++ N  +   +++  C+NG +D+A 
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             +  M +C ++P+   YN L++G+C  G+++  +EL   ME+ G K D  +Y+ +++GY
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  + + A  L  ++  KG+ P  +TY++L  GL E R+   A +LF +M    +  D 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY T IDG C    V+
Sbjct: 471 FTYTTLIDGHCKEGNVQ 487



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 199/366 (54%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    +    D    L   +   G+ P L T++ ++N  CK G++     +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P+ V++ +L+ G C    + EA A+F ++   G  P+V+T+ +LI+ +CR
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ L  +M           + N  T++ +IDG C+ GF+D A     +M+   +
Sbjct: 308 AGNLERAVALVGQMRERG------LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRI 361

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y  LI+G+C     +EA+ L+ EM  +G++P+VV+ + I++  CK G  D+A  
Sbjct: 362 QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFE 421

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  V P+A TY++L+ G C   ++    ELF  M  +G + D+F+Y  LI+G+C
Sbjct: 422 LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHC 481

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V++ALSL++E+  KG+ P VVTY+ L  GL +  + + A +L  ++   D   D  
Sbjct: 482 KEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNI 541

Query: 369 TYRTFI 374
            Y   +
Sbjct: 542 KYEALM 547



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 21/382 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  + +  + +  ++L  ++   GL  + +T++ LI+ FC+ G +    + 
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VV +  LI G C   R+ EA  L  +++A G +P+V+TY+T+++G C+
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  L ++M       GVV  P+ +TYS +I GLC+E  +  A ELF +M    L
Sbjct: 413 IGDTDSAFELNRKMLKK----GVV--PDAITYSSLIRGLCEERRLGDACELFEKMLQLGL 466

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+LI G C   +  +A  L  EM+ +GV P+VV+ +V+++ L K+ +   A R
Sbjct: 467 QPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526

Query: 249 LLDLMVQCDVRPNAFTYNTLM---------------DGFCLTGKINRVKELFVSMESMGC 293
           LL  +   D  P+   Y  LM                GF + G +N+  +++ SM     
Sbjct: 527 LLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K D   Y++LI+G+C+   + +ALS + +L   G  P   +  +L  GLFE      A  
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADN 646

Query: 354 LFVEMQGNDVAADTCTYRTFID 375
           +  E+      AD  T +  ID
Sbjct: 647 VIQELLNCCSLADAETSKALID 668



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 31/332 (9%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           +AP+++ + +++  L +++ +  A  L   +   G  PNV TYN L+  LC  G    AL
Sbjct: 116 YAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 137 NLFKEMTNGNG--------------------------EIGVV----FKPNTVTYSIIIDG 166
            +  +   G G                           +GV+     +P+ VT++ +++G
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LCK G ++ A+++F +M  E L P+ V+Y +L+ G+C A   +EA  +  EM  +GV P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV+   +++ +C+ G ++ A  L+  M +  +R N FT+  L+DGFC  G ++       
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M     +     YN+LINGYCK   ++EA  L +E+  KG+KP VVTY+T+  G  +I 
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + A +L  +M    V  D  TY + I GLC
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 205/379 (54%), Gaps = 15/379 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +NI++  L +N   D  + +F+++N   + PD ++Y ILI+   K G+++    +F ++L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S   P+ V +TSLI GLC  +   +A  LF  +   GC P+ +TYN +I+  C+ G   
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A +L K+M   +G +     P+ VTY+ ++DGLCK   V++A  LF +M+     PN  
Sbjct: 411 EACDLIKKMIE-DGHV-----PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 194 TYTSLIHGFCHAND---------WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           ++ ++I G C  +           +EA  LL  M D G  P+VV+ + +++ LC   ++D
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  LL+ MV+   +P   T NTL+ G C  G+I   +E+  +M S G   D  +YN L+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+C+  + E A  L +++  +G+ P VVTY  L  GL +  +   A  +F +M+ +  A
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            +  TY   I G C   QV
Sbjct: 645 PNLFTYTALILGFCSAGQV 663



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 198/387 (51%), Gaps = 20/387 (5%)

Query: 3   HMHPSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           H   +P  V+  +++ G C+A +  +D    LF  +N  G  P   TY+++I+  CK G 
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +     +  +++     P+VVT+ +++ GLC  SR+ EA  LF +++  GC PN  ++NT
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468

Query: 122 LINGLCRT---------GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           +I GLC+          G    A  L K MT+ +G +     P+ VTYS +I GLC    
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTD-DGHV-----PDVVTYSTLISGLCSIAR 522

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           VD A+ L   M      P VVT  +LIHG C A    EA+ +L  MV  G  P+VV+ N 
Sbjct: 523 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 582

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++  C+ G+ + A  LL  MV   + PN  TY  L+ G C   ++     +F  M+S G
Sbjct: 583 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 642

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           C  + F+Y  LI G+C   +V+  L L+ E+   GI P  V Y TL   L +  ++ RAL
Sbjct: 643 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 702

Query: 353 KLFVEMQGN--DVAADTCTYRTFIDGL 377
           ++  E + +    A     YR  +DGL
Sbjct: 703 EILREGRESLRSEAWGDEVYRFAVDGL 729



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 192/386 (49%), Gaps = 24/386 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    S + +L  L  +   D  L +++        P L T ++L+  FC  GQV     
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK------AFGCEPNVITYNT 121
           +   +     AP+ V++ +++ GLC   R+ EA  LF   +      +    P++  YN 
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I GLC+      A+ +F++M   N        P++ +Y I+IDGL K G ++ A+ LF 
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           ++ +  + P+ V YTSLIHG C AN +++A+ L  +M  +G  P+ V+ NV+++  CK G
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            ++ A  L+  M++    P+  TYNT+MDG C + ++     LF  ME +GC  +  S+N
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467

Query: 302 ILINGYCKNKEVE---------EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            +I G C+  +++         EA  L   +   G  P VVTY+TL  GL  I + + A 
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  +M          T  T I GLC
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLC 553



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 192/458 (41%), Gaps = 73/458 (15%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   H   P V  +N+L+  L+K +  + V  + + +   G FPD +T++ ++   CK G
Sbjct: 36  MEECHSPYPDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAG 93

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++    ++   +      P   T + L   LC    +  A  L   +       N   YN
Sbjct: 94  KMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV----ANSSAYN 149

Query: 121 TLINGLCRTGHTIVALNLFKEMTN-----GNGEIGVVF---------------------K 154
            ++  LC+      AL L + M+        G +  V                      +
Sbjct: 150 IVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE 209

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA--------- 205
           P  VT +++++G C  G VDKA+EL   M  E   P+ V+Y +++ G C A         
Sbjct: 210 PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL 269

Query: 206 -------------------------------NDW-NEAKGLLIEMVDQGVQPNVVSSNVI 233
                                          ND  +EA  +  +M ++ V P+  S  ++
Sbjct: 270 FGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGIL 329

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ L K GK+++A  L   ++   V P+   Y +L+ G C+    +  +ELF  M   GC
Sbjct: 330 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 389

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                +YN++I+  CK   +EEA  L  ++   G  P VVTYNT+  GL +  + E AL 
Sbjct: 390 PPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALL 449

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           LF EM+      +  ++ T I GLC + ++     R K
Sbjct: 450 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGK 487



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 12/247 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L K         +   + S G  PD+ TY+ L++  C+ GQ      +
Sbjct: 540 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    APNVVT+T+L+ GLC  +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 659

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ----MK 184
            G     L LF EM            P+ V Y  +   LCK G   +A E+  +    ++
Sbjct: 660 AGQVDGGLKLFGEMVCAG------ISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 713

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            E     V  Y   + G   A     A G + +MV  G  P       ++  LCK+G+  
Sbjct: 714 SEAWGDEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 771

Query: 245 NASRLLD 251
            A  +L+
Sbjct: 772 EARAVLE 778



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 20/343 (5%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+FP    ++ +I  +C +G+      IF  ++  C +P    +  LI  L         
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAV 63

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +   +   GC P+  T+ T++ GLC+ G    A  +  EM +       +  P   T 
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRS------RMIPPYFATS 117

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +   LC  G +++A +L   M   N +     Y  ++   C A   ++A  L   M +
Sbjct: 118 SFLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSE 173

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           + +     S + ++  L  +G++D A   L +  +    P   T N L++GFC  G++++
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGFCSRGQVDK 230

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT------ 334
            +EL  +M    C  D+ SY  +++G CK   VEEA+ L+ +        +  +      
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YN +  GL +  + + A+++F +M   +V+ D+ +Y   IDGL
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 14/265 (5%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P  + + ++I G C  G T  A+ +F  M            P    Y+++ID L K    
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE-------CHSPYPDVYNVLIDSLSKRQET 60

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +  K++   M      P+  T+T+++ G C A   +EA+ ++ EM  + + P   +S+ +
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
            +ELC  G M+ A +LL++M       N+  YN ++   C   +++   EL  +M     
Sbjct: 121 AHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                S + ++ G   +  ++EAL +Y E      +P +VT N L  G     Q ++A +
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L   M   + A D  +Y T +DGLC
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLC 258


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 197/375 (52%), Gaps = 9/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +   L+  L K         + + L   G  PD+ TY++LI+ +CK G++     +
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+     +P+VVT+ ++++ LC   ++ EA  +  +     C P+VITY  LI   C+
Sbjct: 203 LDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  EM +         KP+ VTY+++I+G+CKEG +D+A      M     
Sbjct: 260 ESGVGQAMKLLDEMRDKG------CKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGC 313

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+  ++   C    W +A+  L EM+ +G  P+VV+ N+++N LC+ G +  A  
Sbjct: 314 QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAID 373

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M Q    PN+ +YN L+   C   K+ R  E    M S GC  D  +YN L+   C
Sbjct: 374 VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALC 433

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V+ A+ + N+L  KG  P ++TYNT+  GL ++ + + A+KL  EM+G  +  D  
Sbjct: 434 KDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDII 493

Query: 369 TYRTFIDGLCVRPQV 383
           TY T + GL    +V
Sbjct: 494 TYSTLVGGLSREGKV 508



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R      +PD+ TY+ILI   CK   V     +
Sbjct: 210 PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+  LI G+C E R+ EA      + ++GC+PNVIT+N ++  +C 
Sbjct: 270 LDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A     EM            P+ VT++I+I+ LC++G + +A ++  +M     
Sbjct: 330 TGRWMDAEKFLAEMIRKG------CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGC 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+H  C       A   L  MV +G  P++V+ N ++  LCK+GK+D A  
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK +   +L   M+  G K D  +Y+ L+ G  
Sbjct: 444 ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLS 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA++ +++L   G+KP  +TYN++  GL + RQ  RA+     M          
Sbjct: 504 REGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTET 563

Query: 369 TYRTFIDGL 377
           +Y   I+GL
Sbjct: 564 SYMILIEGL 572



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 203/378 (53%), Gaps = 12/378 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K     + L L  R++   + PD+ TY+ ++   C  G++     +
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R + R C+ P+V+T+T LI+  C ES + +A  L  +++  GC+P+V+TYN LING+C
Sbjct: 235 LDRQMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+     M +         +PN +T++II+  +C  G    A++   +M  + 
Sbjct: 294 KEGRLDEAIRFLNHMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++ LCK+ KM+ A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LD+MV     P+  TYNTL+   C  GK++   E+   + S GC     +YN +I+G 
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  + ++A+ L +E+  KG+KP ++TY+TL  GL    + + A+  F +++   V  + 
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527

Query: 368 CTYRTFIDGLC-VRPQVR 384
            TY + + GLC  R  VR
Sbjct: 528 ITYNSIMLGLCKARQTVR 545



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 9/319 (2%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G++  GF     ++     P+++  TSLI+GLC   +  +A  +   L+  G  P+VITY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N LI+G C+TG    AL L   M+           P+ VTY+ I+  LC  G + +A E+
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMS---------VSPDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +       P+V+TYT LI   C  +   +A  LL EM D+G +P+VV+ NV++N +CK
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G++D A R L+ M     +PN  T+N ++   C TG+    ++    M   GC     +
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +NILIN  C+   +  A+ +  ++P  G  P  ++YN L H L + ++ ERA++    M 
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 D  TY T +  LC
Sbjct: 415 SRGCYPDIVTYNTLLTALC 433



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 6/320 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+       
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKF 339

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R   +P+VVTF  LI  LC +  I  A  +  K+   GC PN ++YN L++ LC+
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+     M +          P+ VTY+ ++  LCK+G VD A E+  Q+  +  
Sbjct: 400 DKKMERAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P ++TY ++I G       ++A  LL EM  +G++P++++ + ++  L + GK+D A  
Sbjct: 454 SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               + +  V+PNA TYN++M G C   +  R  +    M + GCK  + SY ILI G  
Sbjct: 514 FFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLA 573

Query: 309 KNKEVEEALSLYNELPFKGI 328
                +EAL L NEL  +G+
Sbjct: 574 YEGLAKEALELLNELCSRGV 593



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 6/230 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL  L K+K  +  +     + S G +PD+ TY+ L+   CK G+V +
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++     +P ++T+ ++I GL    +  +A  L  ++K  G +P++ITY+TL+ 
Sbjct: 441 AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVG 500

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+  F ++     E+GV  KPN +TY+ I+ GLCK     +A +    M 
Sbjct: 501 GLSREGKVDEAIAFFHDLE----EMGV--KPNAITYNSIMLGLCKARQTVRAIDFLAYMV 554

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
                P   +Y  LI G  +     EA  LL E+  +GV     +  V++
Sbjct: 555 ARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V +N  +  L +NG+++   + L+ MV     P+     +L+ G C TGK  +   +   
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +E  G   D  +YN+LI+GYCK  E+  AL L + +    + P VVTYNT+   L +  +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + A+++       +   D  TY   I+  C
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATC 258


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/410 (33%), Positives = 210/410 (51%), Gaps = 45/410 (10%)

Query: 15   NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            N LL  L + K     L +++  N +   P+++T++ILI+  C+ G +   + +   + R
Sbjct: 848  NCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR 905

Query: 75   SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTI 133
                 NV+    +IKGLC+  ++  A  LF +++  G C P+V TY+T+++ L ++G   
Sbjct: 906  HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 965

Query: 134  VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
             A  L ++M +          PN VTYS ++ GLCK G +D+A  L  +M     +PN+V
Sbjct: 966  DACRLVEDMVSKG------CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 1019

Query: 194  TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            TY ++I G C     +EA  LL EMVD G QPNVV+  V+++  CK GK ++A  L+++M
Sbjct: 1020 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 254  VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            V+    PN FTYN+L+D FC   ++ R  +L  SM   GC  +  SYN +I G CK  +V
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 314  EE-----------------------------------ALSLYNELPFKGIKPTVVTYNTL 338
             E                                   A  L+N +   G  P +VTYN+L
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 339  FHGLFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             HGL + R+ ++A  L  EM +    + D  TY T IDGLC   +V   Y
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 212/413 (51%), Gaps = 42/413 (10%)

Query: 2   RHMHPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R M  + PP S ++N ++  L+K+   D  + L + +   G  P++++Y+ +++ FCK  
Sbjct: 220 REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +  +++     P+VV++T++I GLC   ++ EA  +  K+   GC+PNVITY 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL++G CR G    A+ L ++MT         ++PN +TY+ I+   C+   +++A ++ 
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERG------YRPNAITYNNIMHVFCRRNDMERAHQVL 393

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M      P+ + Y+++I GFC A    EA  LL +M+ +G +P+V   + +++ LCK 
Sbjct: 394 QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453

Query: 241 GKMDNASRL-----------------------------------LDLMVQCDVRPNAFTY 265
             +D+A  L                                   LD+MV+    P+  TY
Sbjct: 454 AAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTY 513

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N+++DG C + +IN    LF  M + G   D  +Y+I+I+ +CK+  ++ A  +   +  
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               P VVTY+ L +GL +    ++A  +F EM G   A +  TY T IDGLC
Sbjct: 574 AKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC 626



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 199/379 (52%), Gaps = 7/379 (1%)

Query: 1    MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
            M      PP V +++ ++  L K+   D    L + + S G  P++ TYS L++  CK G
Sbjct: 938  MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997

Query: 61   QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++     +  R+ RS  +PN+VT+ ++I G C   RI EA  L  ++   GC+PNV+TY 
Sbjct: 998  KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057

Query: 121  TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
             L++  C+ G    A+ L + M     E G V  PN  TY+ ++D  CK+  V++A +L 
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKDEVERACQLL 1111

Query: 181  LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
              M  +   PNVV+Y ++I G C A   +E   LL +M+     P++V+ N I++ +CK 
Sbjct: 1112 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKT 1171

Query: 241  GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFS 299
             ++D A  L +L+ +    PN  TYN+L+ G C + + ++ + L   M    GC  D  +
Sbjct: 1172 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 1231

Query: 300  YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            YN +I+G CK+K V+ A  L+ ++   G+ P  VTY+ +   L + R  + A  +   M 
Sbjct: 1232 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 1291

Query: 360  GNDVAADTCTYRTFIDGLC 378
             N       TY T IDG C
Sbjct: 1292 KNGFDPGAITYGTLIDGFC 1310



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/361 (36%), Positives = 177/361 (49%), Gaps = 8/361 (2%)

Query: 28   DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
            D  L  F    S  G   D YT + L+    ++ +      ++   L  C +PN+ TFT 
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTFTI 882

Query: 87   LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
            LI GLC    I  A  L  ++   G   NVI +N +I GLC       AL LFKEM    
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 147  GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                    P+  TYS I+D L K G VD A  L   M  +  +PNVVTY+SL+HG C A 
Sbjct: 943  S-----CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997

Query: 207  DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              +EA  LL  M   G  PN+V+ N I++  CK G++D A  LL+ MV    +PN  TY 
Sbjct: 998  KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057

Query: 267  TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             L+D FC  GK      L   M   G   + F+YN L++ +CK  EVE A  L + +  K
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117

Query: 327  GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            G  P VV+YNT+  GL +  +    + L  +M  N+   D  T+ T ID +C   +V   
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177

Query: 387  Y 387
            Y
Sbjct: 1178 Y 1178



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 200/370 (54%), Gaps = 7/370 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++ +LL    K    +  + L + +   G  P+L+TY+ L++ FCK  +V     +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +++    PNVV++ ++I GLC  +++ E   L  ++ +  C P+++T+NT+I+ +C+
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
            T    +A  LF    N   E G    PN VTY+ ++ GLCK    D+A+ L  +M + + 
Sbjct: 1171 TYRVDIAYELF----NLIQESGCT--PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             +P+++TY ++I G C +   + A  L ++M+  G+ P+ V+ +++++ LCK   MD A+
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             +L+LM++    P A TY TL+DGFC TG +++  E+   + S G   D  +++I I+  
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
             K   + +A  L   +   G+ P  VTYNTL  G  +    E A+ LF  M+      D 
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 368  CTYRTFIDGL 377
             TY T +  L
Sbjct: 1405 ATYTTLVGHL 1414



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 215/446 (48%), Gaps = 66/446 (14%)

Query: 5    HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQVS 63
            H  P  V   N+++  L   +  D+ L LFK +   G  P D++TYS +++   K G+V 
Sbjct: 906  HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 965

Query: 64   LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
                +   ++    +PNVVT++SL+ GLC   ++ EA AL  ++   GC PN++TYNT+I
Sbjct: 966  DACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025

Query: 124  NGLCRTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FK 154
            +G C+ G    A +L +EM +G  +  VV                             + 
Sbjct: 1026 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 1085

Query: 155  PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            PN  TY+ ++D  CK+  V++A +L   M  +   PNVV+Y ++I G C A   +E   L
Sbjct: 1086 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 1145

Query: 215  LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-----------------CD 257
            L +M+     P++V+ N I++ +CK  ++D A  L +L+ +                 C 
Sbjct: 1146 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205

Query: 258  VR-------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             R                   P+  TYNT++DG C + +++R  +LF+ M S G   DD 
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265

Query: 299  SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +Y+I+I+  CK + ++EA ++   +   G  P  +TY TL  G  +    ++AL++   +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325

Query: 359  QGNDVAADTCTYRTFIDGLCVRPQVR 384
                   D  T+  FID L  R ++R
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLR 1351



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 6/371 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S+  ++  L K    D    +  ++   G  P++ TY  L++ FC++G +     
Sbjct: 297 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 356

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++    + PN +T+ +++   C  + +  A  +   +   GC P+ I Y+T+I+G C
Sbjct: 357 LVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC 416

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A +L ++M           +P+    S +ID LCK   +D A+EL       +
Sbjct: 417 KAGKLREAHDLLEQMIRRG------CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VV Y+ LIH  C A    EA+  L  MV     P+VV+ N +++ LCK+ ++++A 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L D M    V P+  TY+ ++  FC    ++   ++   M+   C  D  +Y+ LING 
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V++A  ++ E+   G  P +VTYNTL  GL +I + E+A ++   M+      D+
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650

Query: 368 CTYRTFIDGLC 378
            TY   I+GLC
Sbjct: 651 ITYTCLINGLC 661



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 174/358 (48%), Gaps = 14/358 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    +    +    + + +   G  PD   YS +I+ FCK G++     +
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+V   ++LI  LC  + I  A  L        C P+V+ Y+ LI+ LC+
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                      K +      + V+ K    P+ VTY+ ++DGLCK   ++ A  LF +M+
Sbjct: 488 A----------KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+VVTY+ +IH FC  N+ + A  +L  M +    P+VV+ + ++N LCK G +D
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +   M+ C   PN  TYNTL+DG C   K+ +  E+   M    C  D  +Y  LI
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           NG C    +EEA  +  E+  KG  P  +TY TL   L +    E   +L  EM+  +
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE 715



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    +    D  + L +++   G  P+  TY+ +++ FC+   +     +
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++   P+ + ++++I G C   ++ EA  L  ++   GC P+V   +TLI+ LC+
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L +        IG+   P+ V YSI+I  LCK   + +A+     M     
Sbjct: 453 AAAIDSAQELLRM------SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRC 506

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY S++ G C +   N+A  L   M   GV P+VV+ +++++  CK+  +D+A +
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFK 566

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M +    P+  TY+ L++G C  G +++  ++F  M   GC  +  +YN LI+G C
Sbjct: 567 MLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC 626

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +VE+A  +   +  +   P  +TY  L +GL    + E A ++  EM+      D  
Sbjct: 627 KINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRM 686

Query: 369 TYRTFIDGL 377
           TY T +  L
Sbjct: 687 TYGTLLRAL 695



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 168/311 (54%), Gaps = 7/311 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V S+N ++  L K       + L +++ S    PD+ T++ +I+  CK  +V + + +
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
            F  I  S   PN+VT+ SL+ GLC   R  +A  L  ++ +  GC P++ITYNT+I+GLC
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            ++     A  LF +M +          P+ VTYSI+I  LCK  F+D+A  +   M    
Sbjct: 1241 KSKRVDRAYKLFLQMLSDG------LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             +P  +TY +LI GFC   + ++A  +L  ++ +G  P+VV+ ++ ++ L K G++  A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LL+ M++  + P+  TYNTL+ GFC         +LF  M   GC+ D+ +Y  L+   
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414

Query: 308  CKNKEVEEALS 318
               K  ++ L+
Sbjct: 1415 VDKKSYKDLLA 1425



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 7/338 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   +++  + L+N   K  Q S    +F   +   +  + VT+++LI G     +I+ A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF ++   G + +   + +++ GLC  G    A+  F+EM+           P++VTY
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDSVTY 233

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I+GL K   +D A  L  +M      PNV +Y +++HGFC AN    A  LL +MV 
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  P+VVS   ++N LCK  ++D A R++D M+Q   +PN  TY TL+DGFC  G ++ 
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             EL   M   G + +  +YN +++ +C+  ++E A  +   +   G  P  + Y+T+  
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  +  +   A  L  +M       D     T ID LC
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC 451



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 7/270 (2%)

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           + +TY+TLI+G  R G  + A  LF EM N  G      K +   +  I+ GLC  G   
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEM-NRKG-----LKAHAGVHKSILRGLCDAGQCS 213

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            A   F +M  +   P+ VTY ++I+G   ++  ++A  LL EMVD G  PNV S N ++
Sbjct: 214 DAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 272

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +  CK  +++NA  LL+ MV     P+  +Y T+++G C   +++    +   M   GC+
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +Y  L++G+C+  +++ A+ L  ++  +G +P  +TYN + H        ERA ++
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              M       D   Y T I G C   ++R
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLR 422



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 128/294 (43%), Gaps = 33/294 (11%)

Query: 7    SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            S P V +F+I +  L+K         L + +   GL PD  TY+ L+  FC         
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAV 1389

Query: 67   VIFGRILRSC-FAPNVVTFTSLI---------KGLCAE--SRIVEAA-----ALFTKLKA 109
             +F  ++R C   P+  T+T+L+         K L AE    +V+        L +KL+A
Sbjct: 1390 DLF-EVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEA 1448

Query: 110  -FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
                E +V     +++   + G    A  +F+ M           + N V +S ++    
Sbjct: 1449 SIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMD----------QRNVVLWSAMLGVYV 1498

Query: 169  KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNV 227
                 ++A  L+  M  E + P+ VT+ SL+   CHA   + A    + +  D G++P V
Sbjct: 1499 FHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGV 1558

Query: 228  VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
               + +++ L + G ++ A    DLM+    +P+A T+N L+  + + G   R 
Sbjct: 1559 DHFSCVIDLLGRLGLVNEAE---DLMLGMPCKPSAATWNCLLSAYKICGDFERA 1609


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 203/370 (54%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L K+        + + +   G  P++ TY+ LIN FCK+G +    V+
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L +  +P+V T+  LI G C + R  + A L  ++  +GCEPN ITYNTL++ L +
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  I A NL + M   +       KP+  T++++ID  CK G +D A ELF  M     
Sbjct: 354 SGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY  +I G C AN  ++A+ LL  M + G  P+VV+ N I++ LCK  ++D A  
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + +++       +  T +TL+DG C + +++  ++L   ME  G   D  +Y ILI+G+C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++++L+ ++E+  KG  PTV+TY+ +   L +  +      L   M    V  D  
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587

Query: 369 TYRTFIDGLC 378
            Y + IDGLC
Sbjct: 588 VYTSVIDGLC 597



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 199/352 (56%), Gaps = 6/352 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K+  Y    +L + +      P  +T++++I+ FCK+GQ+ L + +
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++ T+  +I G C  +RI +A  L  ++   GC P+V+TYN++++GLC+
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 458

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +++ + NG   + VV      T S +IDGLCK   +D A++L  +M+    
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVV------TCSTLIDGLCKSRRLDDAEKLLREMERNGS 512

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV YT LIHGFC A+  +++     EM+D+G  P V++ ++++++LCK+ ++ +   
Sbjct: 513 APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCM 572

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M++  V P+A  Y +++DG C +   +   EL+  M+  GC     +YN+L++  C
Sbjct: 573 LLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLC 632

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           K   ++EA+ L   +   G  P  VTYN++F G ++  + ++A +LF  M+ 
Sbjct: 633 KVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N LL    + K       LFK        PD  TYS LIN FCK       + +   + +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+   + ++IKGLC   R+  A   +  ++   C P+VITY  L++ LC++     
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISD 254

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  + ++M     E G    PN VTY+ +I+G CK G +D+A  LF QM   + +P+V T
Sbjct: 255 ASLILEDMI----EAGCA--PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI G+C      +   LL EMV  G +PN ++ N +M+ L K+GK  +A  L  +M+
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           + D +P+ FT+N ++D FC  G+++   ELF  M   GC  D ++YNI+I+G C+   ++
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A  L   +   G  P VVTYN++  GL +  Q + A +++  ++      D  T  T I
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488

Query: 375 DGLC 378
           DGLC
Sbjct: 489 DGLC 492



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 7/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+    K + +     L   +   G+ P    Y+ +I   C  G+V    V 
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + R+C AP+V+T+T L+  LC  +RI +A+ +   +   GC PNV+TYNTLING C+
Sbjct: 225 YRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF +M   +        P+  TY+I+IDG CK+       +L  +M     
Sbjct: 284 LGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY +L+     +  + +A  L   M+ +  +P+  + N++++  CK G++D A  
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  LM      P+ +TYN ++ G C   +I+  ++L   M   GC  D  +YN +++G C
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V+EA  +Y  L   G    VVT +TL  GL + R+ + A KL  EM+ N  A D  
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            Y   I G C   Q+  + A
Sbjct: 518 AYTILIHGFCKADQLDKSLA 537



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 10/358 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+++    K    D    LF+ +   G  PD+YTY+I+I+  C+  ++     +
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  +   P+VVT+ S++ GLC  S++ EA  ++  L+  G   +V+T +TLI+GLC+
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493

Query: 129 TGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +     A  L +EM  NG+        P+ V Y+I+I G CK   +DK+   F +M  + 
Sbjct: 494 SRRLDDAEKLLREMERNGSA-------PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P V+TY+ +I   C +    +   LL  M+++GV P+ +    +++ LCK+   D A 
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L  LM Q    P   TYN L+D  C   +++    L   MES GC  D  +YN + +G+
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDV 363
            K+ E ++A  L+  +  +G  PT   Y+ L   L    + ++A++++ E    G DV
Sbjct: 667 WKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADV 724



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 140/289 (48%), Gaps = 6/289 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N ++  L K    D    +++ L + G F D+ T S LI+  CK  ++     
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + R+  AP+VV +T LI G C   ++ ++ A F+++   GC P VITY+ +I+ LC
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++        L K M     E GV   P+ + Y+ +IDGLCK    D+A EL+  MK   
Sbjct: 563 KSARVRDGCMLLKTML----ERGVT--PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P VVTY  L+   C  +  +EA  LL  M   G  P+ V+ N + +   K+ + D A 
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           RL   M      P  F Y+ L+       K+++  E++      G   D
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 34/269 (12%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K +  T + ++    ++    +A +LF   +    +P+ +TY++LI+GFC A D+ +A 
Sbjct: 128 YKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAY 187

Query: 213 GLLIEMVDQGV----------------------------------QPNVVSSNVIMNELC 238
            LL EM  +G+                                   P+V++  ++++ LC
Sbjct: 188 RLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALC 247

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+ ++ +AS +L+ M++    PN  TYNTL++GFC  G ++    LF  M    C  D F
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNILI+GYCK +  ++   L  E+   G +P  +TYNTL   L +  +   A  L   M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
              D      T+   ID  C   Q+   Y
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 8/223 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++ IL+    K    D  L+ F  +   G  P + TYSI+I+  CK  +V  G 
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++   +L     P+ + +TS+I GLC      EA  L+  +K  GC P V+TYN L++ L
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A++L  E+   +G +     P+TVTY+ + DG  K    DKA  LF  MK  
Sbjct: 632 CKVSRLDEAIHLL-EVMESDGCL-----PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNV 227
             +P    Y+ L+         ++A  +  E ++ G  V P +
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%)

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G KH  F+ N L++ + + K+ +EA  L+         P  +TY+TL +G  + R  ++A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +L  EM+   +      Y T I GLC
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLC 213


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 209/409 (51%), Gaps = 48/409 (11%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGF 66
           P+ S N  L  +A++     V S F R+   G   + P ++TY ILI C C  G++ LGF
Sbjct: 52  PIRSLNGALADVARDNPAAAV-SRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGF 110

Query: 67  VIFGRILRSCF------------------------------------APNVVTFTSLIKG 90
              G +++  F                                     PNV + T ++KG
Sbjct: 111 AALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKG 170

Query: 91  LCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           LC E+R  EA  L   +     GC PNV++Y+T+I+GL + G    A   ++EM +    
Sbjct: 171 LCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRR-- 228

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                 PN V YS II  LCK   +DKA E+  +M    + PN  TYTSL+HGFC +   
Sbjct: 229 ----ILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQL 284

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EA   L +M   GV+PNVV+ +  M+ LCKNG+   A ++ D MV+  ++P+  TY++L
Sbjct: 285 TEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSL 344

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G+ + G +  +  LF  M     + D + +N LI    K  +V+EA+ +++++  +G+
Sbjct: 345 LHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGL 404

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           KP  VTY+TL +G  +I + E AL LF EM  N V+ +  TY   + GL
Sbjct: 405 KPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 10/327 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V S  I+L  L         L L   +  +  G  P++ +YS +I+   K G     +
Sbjct: 159 PNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAY 218

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             +  +L     PNVV ++S+I  LC    + +A  +  ++   G  PN  TY +L++G 
Sbjct: 219 ATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGF 278

Query: 127 CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           C +G    A+   ++M +NG        +PN VTYS  +D LCK G   +A+++F  M  
Sbjct: 279 CSSGQLTEAIKFLEKMCSNG-------VEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVK 331

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P++ TY+SL+HG+       E  GL   MV   +QP+    N ++    K GK+D 
Sbjct: 332 RGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDE 391

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +   M Q  ++PN  TY+TL++G+C   ++     LF  M S G   +  +YNI++ 
Sbjct: 392 AMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQ 451

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTV 332
           G  +      A   Y ++   G K  +
Sbjct: 452 GLFRTGRTATAKEFYVQIIKSGKKDLI 478



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 3/199 (1%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P V TY  LI   C A   +     L  +V +G +   +  N ++  LC + + D+A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 248 RL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILI 304
            + L  M +    PN F++  ++ G C   +     EL   M  +  GC  +  SY+ +I
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  K  + ++A + Y E+  + I P VV Y+++   L + +  ++A+++   M  N V 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            +  TY + + G C   Q+
Sbjct: 266 PNCFTYTSLVHGFCSSGQL 284


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 209/379 (55%), Gaps = 29/379 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+  L    H    LS+ + +   G  P+  TY+ L+  FC+ G+V     +
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN+VTF S++ G+C   R+ +A  +F ++   G  P+ ++YNTL+ G C+
Sbjct: 215 VDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCK 274

Query: 129 TGHTIVALNLFKEMTN--------------------GNGE--IGVV-------FKPNTVT 159
            G +  AL++F EMT                     GN E  +G+V        + N +T
Sbjct: 275 VGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT 334

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +IDG CK+GF+D A     +M+   + P+VV Y +LI+G+C     +EA+ L+ EM 
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +GV+P+VV+ + I++  CKNG   +A +L   M++  V P+A TY++L+   C   ++ 
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG 454

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF +M S+G + D+ +Y  LI+G+CK   VE ALSL++E+   G+ P VVTY+ L 
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLI 514

Query: 340 HGLFEIRQAERALKLFVEM 358
           +GL +  + + A +L  ++
Sbjct: 515 NGLSKSARTKEAQRLLFKL 533



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L+ +    +    F  + S G+ P++YTY+IL+   C  G       +
Sbjct: 121 PSVLAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN VT+ +L+   C    +  A  L   ++  G +PN++T+N+++NG+C+
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F EM            P+ V+Y+ ++ G CK G   +A  +F +M  + +
Sbjct: 240 AGRMEDARKVFDEMVKEG------LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+TSLIH  C A +   A GL+ EM ++G+Q N ++   +++  CK G +D+A  
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M QC ++P+   YN L++G+C+ G+++  +EL   ME+ G K D  +Y+ +++ YC
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +   A  L  ++   G+ P  +TY++L   L E ++   A  LF  M    +  D  
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 369 TYRTFIDGLC 378
           TY + IDG C
Sbjct: 474 TYTSLIDGHC 483



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 190/383 (49%), Gaps = 23/383 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  + K  + +  + L + +   GL  +  T++ LI+ FCK G +    + 
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R +R C   P+VV + +LI G C   R+ EA  L  +++A G +P+V+TY+T+++  C
Sbjct: 355 V-REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A  L ++M     E GV+  P+ +TYS +I  LC+E  +  A  LF  M    
Sbjct: 414 KNGDTHSAFQLNQQML----ENGVL--PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VTYTSLI G C   +   A  L  EMV  GV P+VV+ +V++N L K+ +   A 
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527

Query: 248 RLLDLMVQCDVRPNAFTYNTLM---------------DGFCLTGKINRVKELFVSMESMG 292
           RLL  +   +  P    Y+ LM                GFC+ G +N   +++ S+    
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRN 587

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D   Y++LI+G+C+   V +ALS + ++   G  P   +  +L  GLFE      A 
Sbjct: 588 WNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEAD 647

Query: 353 KLFVEMQGNDVAADTCTYRTFID 375
           ++  ++      AD    +  ID
Sbjct: 648 QVIQQLLNCCSLADAEASKALID 670



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 21/338 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+         D    L + + + G+ PD+ TYS +++ +CK G     F +
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L +   P+ +T++SLI+ LC E R+ +A  LF  + + G +P+ +TY +LI+G C+
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  EM       GV+  P+ VTYS++I+GL K     +A+ L  ++ +E  
Sbjct: 485 EGNVERALSLHDEMVKA----GVL--PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 189 NPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            P  + Y +L+                GFC     NEA  +   ++D+    +    +V+
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  C+ G +  A      M+QC   PN+ +  +L+ G    G +    ++   + +   
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
             D  +   LI+   K   V+  L + + +   G+ P+
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 195/354 (55%), Gaps = 7/354 (1%)

Query: 26  HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
           H+     +F+++ S GL P + T++  ++  CK G+      IF  +      P++V+++
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
            L+ G   E R  +   LF  +   G   N   +N LI+   + G    A+ +F EM  G
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QG 467

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
            G      +P+ VTYS +I   C+ G +  A E F QM    L PN V Y SLIHGFC  
Sbjct: 468 QG-----VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522

Query: 206 NDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
            D  +AK L+ EM+ +G+ +PN+V  + I++ LC  G++ +A  + +L++    RP   T
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           +N+L+DG+CL GK+ +   +  +M S+G + D  +YN L++GYCK+ ++++ L L+ E+ 
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            K +KPT VTY+ +  GLF   +   A K+F EM  +  A D  TY+  + GLC
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 196/369 (53%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ILL   A    +  + +LF  +   G+  + + ++ILI+   K G +    ++
Sbjct: 402 PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLV 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+VVT+++LI   C   R+ +A   F+++ + G EPN + Y++LI+G C 
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCM 521

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM +       + +PN V +S II  LC EG V  A ++F  + +   
Sbjct: 522 HGDLVKAKELVSEMMSKG-----IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGD 576

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P +VT+ SLI G+C      +A G+L  MV  G++P+VV+ N +++  CK+GK+D+   
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V+P   TY+ ++DG    G+ +  K++F  M   G   D  +Y IL+ G C
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA++L+++L     K  +   NT+ + L+++R+ E A  LF  +  + +  +  
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 757 TYGVMIHNL 765



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 193/376 (51%), Gaps = 9/376 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P  V ++ IL+ C  + +  D   + F RL   GL       +  + C C   +     
Sbjct: 152 APLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAV 211

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLI 123
            V+  R+      PN +++ ++IK LC +SR  EA  +  ++   G  C P+V+++NT+I
Sbjct: 212 DVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 271

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G    A NL  EM     E      P+ VTY+ I+D LCK   +DKA+ +  QM
Sbjct: 272 HGFFKQGEVSKACNLINEMVQKGVE------PDVVTYNSIVDALCKARAMDKAELVLRQM 325

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + + P+ +TYT++IHG+  +  W E+  +  +M  +G+ P +V+ N  M+ LCK+G+ 
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +A  +   M      P+  +Y+ L+ G+   G+   +  LF SM   G   +   +NIL
Sbjct: 386 KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL 445

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+ + K   ++EA+ ++ E+  +G++P VVTY+TL      + +   A++ F +M    +
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505

Query: 364 AADTCTYRTFIDGLCV 379
             +T  Y + I G C+
Sbjct: 506 EPNTVVYHSLIHGFCM 521



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 7/355 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+   AK    D  + +F  +   G+ PD+ TYS LI+ FC+MG+++     F +++
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                PN V + SLI G C    +V+A  L +++ + G   PN++ ++++I+ LC  G  
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A ++F      N  I +  +P  VT++ +IDG C  G ++KA  +   M    + P+V
Sbjct: 562 MDAHDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 615

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +L+ G+C +   ++   L  EM+ + V+P  V+ +++++ L   G+   A ++   
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+      +  TY  L+ G C     +    LF  + +M CK D    N +IN   K + 
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            EEA  L+  +   G+ P V TY  + H L +    E A  +F  M+ +  A  +
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 6/269 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+         +    +   + S+G+ PD+ TY+ L++ +CK G++  G ++
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P  VT++ ++ GL    R   A  +F ++   G   ++ TY  L+ GLCR
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 697

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  A+ LF ++    G +   F  +    + +I+ L K    ++A +LF  +    L
Sbjct: 698 NDLTDEAITLFHKL----GAMDCKF--DITILNTVINALYKVRRREEANDLFAAISTSGL 751

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  +IH         EA  +   M   G  P+    N I+  L + G +  A  
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 811

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
            +  +    +   A T + LM  F   GK
Sbjct: 812 YMSKVDGTIISLEASTTSLLMSLFSSKGK 840


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 206/403 (51%), Gaps = 36/403 (8%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGF 66
           P+ S N  L  +A++     V S F R+   G   + P ++TY ILI C C  G++ LGF
Sbjct: 52  PIRSLNGALADVARDNPAAAV-SRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGF 110

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLING 125
              G +++  F    + F  L+KGLCA+ R  +A  +  + +   GC PNV ++  ++ G
Sbjct: 111 AALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKG 170

Query: 126 LCRTGHTIVALNLFKEMTNGNG-----------------------EIGVVFK-------- 154
           LC    +  AL L   M +  G                       +    ++        
Sbjct: 171 LCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRIL 230

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN VTYS II  LCK   +DKA E+  +M    + PN  TYTSL+HGFC +    EA   
Sbjct: 231 PNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKF 290

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +M   GV+PNVV+ +  M+ LCKNG+   A ++   MV+  ++P+  TY++L+ G+ +
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAI 350

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +  +  LF  M     + D + +N LI    K  +V+EA+ +++++  +G+KP  VT
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVT 410

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YNTL +G  +I + E AL LF EM  N V+ +  TY   + GL
Sbjct: 411 YNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 139/319 (43%), Gaps = 13/319 (4%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE---PNVITYNTLIN 124
           +F  +LR      + +    +  + A      A + F ++   G     P V TY  LI 
Sbjct: 40  VFDELLRRGIGAPIRSLNGALADV-ARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIG 98

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-M 183
             C  G   +       +          F+   + ++ ++ GLC +   D A ++ L+ M
Sbjct: 99  CCCSAGRLDLGFAALGHVVKKG------FRVEPIIFNPLLKGLCADKRTDDAMDIVLRGM 152

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNG 241
                 PNV ++T ++ G CH N   EA  LL  M D G    PNVVS + + + L K G
Sbjct: 153 TELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGG 212

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             D A      M+   + PN  TY++++   C    +++  E+   M   G   + F+Y 
Sbjct: 213 DPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYT 272

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            L++G+C + ++ EA+    ++   G++P VVTY++    L +  +   A K+F  M   
Sbjct: 273 SLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKR 332

Query: 362 DVAADTCTYRTFIDGLCVR 380
            +  D  TY + + G  + 
Sbjct: 333 GLKPDITTYSSLLHGYAIE 351



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 3/199 (1%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P V TY  LI   C A   +     L  +V +G +   +  N ++  LC + + D+A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 248 RL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILI 304
            + L  M +    PN F++  ++ G C   +     EL   M  +  GC  +  SY+ + 
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  K  + ++A + Y E+  + I P VVTY+++   L + +  ++A+++   M  N V 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            +  TY + + G C   Q+
Sbjct: 266 PNCFTYTSLVHGFCSSGQL 284


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    D    L K ++S G+ P+L +Y+++IN  C+ G +   + I
Sbjct: 43  PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F P+ VT+ +L+ G C E    +A  +  ++   G  P+V+TY  LIN +C+
Sbjct: 103 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A+  F +M           +PN  TY+ +IDG  ++G +++A  +  +M     
Sbjct: 163 ARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY + IHG C      EA G++ EMV++G+ P+VVS + I++  C+ G++D A +
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV+  V P+A TY++L+ G C   ++    +L   M  MG   D+F+Y  LIN YC
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++ +AL L++E+  KG  P  VTY+ L +GL +  +   A +L  ++   +      
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396

Query: 369 TYRTFID 375
           TY T I+
Sbjct: 397 TYDTLIE 403



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 185/337 (54%), Gaps = 6/337 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++YTY+ILI  FC +G++  G   FG + R+   PNVVT+ +LI   C   RI EA  L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G +PN+I+YN +INGLCR G    A  + +EM    G  G  F P+ VTY+ +
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKG--FTPDEVTYNTL 121

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ++G CKEG   +A  +  +M    ++P+VVTYT+LI+  C A + N A     +M  +G+
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN  +   +++   + G ++ A R+L+ M +    P+  TYN  + G C+  ++     
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +   M   G   D  SY+ +I+G+C+  E++ A  +  E+  KG+ P  VTY++L  GL 
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           E+R+   A  L  EM    +  D  TY T I+  CV 
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 338



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 174/307 (56%), Gaps = 6/307 (1%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++RS  +PNV T+  LI+G C+   + +    F +++  GC PNV+TYNTLI+  C+ G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  L K M++         +PN ++Y++II+GLC+EG + +A E+  +M Y+   P+
Sbjct: 61  IDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 114

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTY +L++G+C   ++++A  +  EMV  GV P+VV+   ++N +CK   ++ A    D
Sbjct: 115 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    +RPN  TY TL+DGF   G +N    +   M   G      +YN  I+G+C  +
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +EEAL +  E+  KG+ P VV+Y+T+  G     + +RA ++  EM    V+ D  TY 
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 372 TFIDGLC 378
           + I GLC
Sbjct: 295 SLIQGLC 301



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 186/351 (52%), Gaps = 21/351 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  + K ++ +  +  F ++   GL P+  TY+ LI+ F + G ++  + I
Sbjct: 148 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S F+P+VVT+ + I G C   R+ EA  +  ++   G  P+V++Y+T+I+G CR
Sbjct: 208 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +EM     E GV   P+ VTYS +I GLC+   + +A +L  +M    L
Sbjct: 268 KGELDRAFQMKQEMV----EKGV--SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+LI+ +C   D N+A  L  EM+ +G  P+ V+ +V++N L K  +   A R
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSMESMGC 293
           LL  ++  +  P+  TY+TL++               GFC+ G ++    +F SM     
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           K  +  YN++I+G+C+   + +A +LY E+   G  P  VT  TL   LF+
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 26/343 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N  +      +  +  L + + +   GL PD+ +YS +I+ FC+ G++   F +
Sbjct: 218 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 277

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    +P+ VT++SLI+GLC   R+ EA  L  ++   G  P+  TY TLIN  C 
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L  EM +        F P+ VTYS++I+GL K+    +AK L  ++ YE  
Sbjct: 338 EGDLNKALHLHDEMIHKG------FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391

Query: 189 NPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            P+ VTY +LI                GFC     +EA  +   MV++  +P     NVI
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 451

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  C+ G +  A  L   M+     P+  T  TL+      G    + E+ +      C
Sbjct: 452 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV-IGDTLRSC 510

Query: 294 KHDDFSY-NILINGYCKNKEVEEALS---LYNELPFKGIKPTV 332
           + ++     +L+    K   +E  L+   LYN+L  K +  +V
Sbjct: 511 RLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKLSLKCVASSV 553



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 21/188 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+         +  L L   +   G  PD  TYS+LIN   K  +      
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381

Query: 68  IFGRILRSCFAPNVVTF---------------TSLIKGLCAESRIVEAAALFTKLKAFGC 112
           +  +++     P+ VT+                +LIKG C +  + EA  +F  +     
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           +P    YN +I+G CR G+   A NL+KEM +        F P+TVT   +I  L KEG 
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG------FVPHTVTVITLIKALFKEGM 495

Query: 173 VDKAKELF 180
            ++  E+ 
Sbjct: 496 NEEMSEVI 503


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 211/411 (51%), Gaps = 46/411 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVL-SLFKRLNSIGLFPDLYTYSILINCFCKM 59
           ++ + P+    SS  +LL    K    + VL  + KR    G+FPD   Y+ LI+ FCK+
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKR----GVFPDHVIYTTLIDGFCKL 228

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G     + +F  +      P+ + F++LI GL    ++VEA  LF ++   G EP+ +TY
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             LI+G C+ G    A  L  +M     +IG+   PN VTY+ + DGLCK G +D A EL
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMV----QIGLT--PNVVTYTALADGLCKSGELDTANEL 342

Query: 180 F-----------------------------------LQMKYENLNPNVVTYTSLIHGFCH 204
                                                +MK   L+P+ +TYT+L+  +  
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             +  +A+ LL EM+D+G+QP VV+ NV+MN LC +GK+++  RLL  M++  + PNA T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YN++M  +C+   +    E++  M + G   D  +YNILI G+CK + ++EA  L+ E+ 
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMV 522

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
            K    T  +YN L  G F+ ++   A +LF EM+   + A    Y  F+D
Sbjct: 523 EKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 12/384 (3%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
            S+NIL+  L +         L  R+   G  PD+ +Y+ +I+ +C +G++     +   
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +      PN+ T++S+I  LC   ++VE   +  ++   G  P+ + Y TLI+G C+ G+
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
           T  A  LF EM            P+++ +S +I GL   G V +A +LF +M  +   P+
Sbjct: 231 TQAAYKLFSEMEARE------IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTYT+LI G+C   +  +A  L  +MV  G+ PNVV+   + + LCK+G++D A+ LL 
Sbjct: 285 EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  ++ N  TYNT+++G C  G I +  +L   M+  G   D  +Y  L++ Y K  
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLF---EIRQAERALKLFVEMQGNDVAADTC 368
           E+ +A  L  E+  +G++PTVVT+N L +GL    ++   ER LK  +E     +  +  
Sbjct: 405 EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE---KGIMPNAA 461

Query: 369 TYRTFIDGLCVRPQVRFTYARRKG 392
           TY + +   C+R  +R +    +G
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRG 485



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 9/371 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC-KMGQVSLG 65
           S P V  F++    L +    +     F +L + G+     + ++ + C   K   + + 
Sbjct: 37  SDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMV 94

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F    +     N  ++  L+  L    +I EA  L  +++  GC P+V++Y T+I+G
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C  G     + L KEM           KPN  TYS II  LCK G V + +++  +M  
Sbjct: 155 YCHVGELQKVVQLVKEMQLKG------LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + P+ V YT+LI GFC   +   A  L  EM  + + P+ ++ + ++  L  +GK+  
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +L + M++    P+  TY  L+DG+C  G++ +   L   M  +G   +  +Y  L +
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK+ E++ A  L +E+  KG++  + TYNT+ +GL +     +A+KL  EM+   +  
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388

Query: 366 DTCTYRTFIDG 376
           DT TY T +D 
Sbjct: 389 DTITYTTLMDA 399



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 29/343 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L+ +        LF  +   G  PD  TY+ LI+ +CK+G++   F +
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    PNVVT+T+L  GLC    +  A  L  ++   G + N+ TYNT++NGLC+
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 129 TGHTIVALNLFKEMTNG------------------NGEIGVV-----------FKPNTVT 159
            G+ + A+ L +EM                      GE+               +P  VT
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++++GLC  G ++  + L   M  + + PN  TY S++  +C  N+   +  +   M 
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            QGV P+  + N+++   CK   M  A  L   MV+      A +YN L+ GF    K+ 
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
             ++LF  M   G       YN+ ++   +   +E  L L +E
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 150/281 (53%), Gaps = 7/281 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VALNLFKEMTNGNGEIGVVFKPNT 157
           EA   F KL  +G   +  + N  +  L      + + L +F E      ++GV +  NT
Sbjct: 57  EARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFP----QLGVCW--NT 110

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            +Y+I+++ L + G + +A  L ++M+++   P+VV+YT++I G+CH  +  +   L+ E
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G++PN+ + + I+  LCK+GK+    ++L  M++  V P+   Y TL+DGFC  G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                +LF  ME+     D  +++ LI G   + +V EA  L+NE+  KG +P  VTY  
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  G  ++ + ++A  L  +M    +  +  TY    DGLC
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 6/245 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +S++N ++  L K  +    + L + +   GL PD  TY+ L++ + K G++     +  
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P VVTF  L+ GLC   ++ +   L   +   G  PN  TYN+++   C   
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN 474

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +  ++  +++ M       GVV  P++ TY+I+I G CK   + +A  L  +M  +  N 
Sbjct: 475 NMRISTEIYRGMCAQ----GVV--PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
              +Y +LI GF       EA+ L  EM  +G+  +    N+ ++   + G M+    L 
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELC 588

Query: 251 DLMVQ 255
           D  ++
Sbjct: 589 DEAIE 593


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    D    L K ++S G+ P+L +Y+++IN  C+ G +   + I
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F P+ VT+ +L+ G C E    +A  +  ++   G  P+V+TY  LIN +C+
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A+  F +M           +PN  TY+ +IDG  ++G +++A  +  +M     
Sbjct: 367 ARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY + IHG C      EA G++ EMV++G+ P+VVS + I++  C+ G++D A +
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV+  V P+A TY++L+ G C   ++    +L   M  MG   D+F+Y  LIN YC
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++ +AL L++E+  KG  P  VTY+ L +GL +  +   A +L  ++   +      
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 600

Query: 369 TYRTFID 375
           TY T I+
Sbjct: 601 TYDTLIE 607



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 204/378 (53%), Gaps = 10/378 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK-MGQ 61
           H++ S   V  F++++   +     D  ++      S G  P + +Y+ +++   +  G 
Sbjct: 136 HVYNSSSAV--FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGS 193

Query: 62  VSLGFV-IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           V L    ++  ++RS  +PNV T+  LI+G C+   + +    F +++  GC PNV+TYN
Sbjct: 194 VKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYN 253

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+  C+ G    A  L K M++         +PN ++Y++II+GLC+EG + +A E+ 
Sbjct: 254 TLIDAYCKMGRIDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEIL 307

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M Y+   P+ VTY +L++G+C   ++++A  +  EMV  GV P+VV+   ++N +CK 
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             ++ A    D M    +RPN  TY TL+DGF   G +N    +   M   G      +Y
Sbjct: 368 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N  I+G+C  + +EEAL +  E+  KG+ P VV+Y+T+  G     + +RA ++  EM  
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487

Query: 361 NDVAADTCTYRTFIDGLC 378
             V+ D  TY + I GLC
Sbjct: 488 KGVSPDAVTYSSLIQGLC 505



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 186/351 (52%), Gaps = 21/351 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  + K ++ +  +  F ++   GL P+  TY+ LI+ F + G ++  + I
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S F+P+VVT+ + I G C   R+ EA  +  ++   G  P+V++Y+T+I+G CR
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +EM     E GV   P+ VTYS +I GLC+   + +A +L  +M    L
Sbjct: 472 KGELDRAFQMKQEMV----EKGV--SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+LI+ +C   D N+A  L  EM+ +G  P+ V+ +V++N L K  +   A R
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585

Query: 249 LLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSMESMGC 293
           LL  ++  +  P+  TY+TL++               GFC+ G ++    +F SM     
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 645

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           K  +  YN++I+G+C+   + +A +LY E+   G  P  VT  TL   LF+
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 163/345 (47%), Gaps = 43/345 (12%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI--VALNLFKE 141
           F  ++K     + I +A       K+ G  P V++YN++++ + R+  ++   A  +++E
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M      I     PN  TY+I+I G C  G + K    F +M+     PNVVTY +LI  
Sbjct: 205 M------IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +C     +EA GLL  M  +G+QPN++S NVI+N LC+ G M  A  +L+ M      P+
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 262 AFTYNTLMDGFCLTG-----------------------------------KINRVKELFV 286
             TYNTL++G+C  G                                    +NR  E F 
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   G + ++ +Y  LI+G+ +   + EA  + NE+   G  P+VVTYN   HG   + 
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           + E AL +  EM    +A D  +Y T I G C + ++   +  ++
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 21/291 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N  +      +  +  L + + +   GL PD+ +YS +I+ FC+ G++   F +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    +P+ VT++SLI+GLC   R+ EA  L  ++   G  P+  TY TLIN  C 
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L  EM +        F P+ VTYS++I+GL K+    +AK L  ++ YE  
Sbjct: 542 EGDLNKALHLHDEMIHKG------FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595

Query: 189 NPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            P+ VTY +LI                GFC     +EA  +   MV++  +P     NVI
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           ++  C+ G +  A  L   M+     P+  T  TL+      G    + E+
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 2/200 (1%)

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           L+  Y   N +   +  ++  + H N  ++A   +      G  P V+S N +++ + ++
Sbjct: 131 LKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRS 190

Query: 241 -GKMD-NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            G +  +A  +   M++  V PN +TYN L+ GFC  G++ +    F  ME  GC  +  
Sbjct: 191 RGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVV 250

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+ YCK   ++EA  L   +  KG++P +++YN + +GL      + A ++  EM
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310

Query: 359 QGNDVAADTCTYRTFIDGLC 378
                  D  TY T ++G C
Sbjct: 311 GYKGFTPDEVTYNTLLNGYC 330



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 21/187 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+         +  L L   +   G  PD  TYS+LIN   K  +      
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585

Query: 68  IFGRILRSCFAPNVVTF---------------TSLIKGLCAESRIVEAAALFTKLKAFGC 112
           +  +++     P+ VT+                +LIKG C +  + EA  +F  +     
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 645

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           +P    YN +I+G CR G+   A NL+KEM +        F P+TVT   +I  L KEG 
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG------FVPHTVTVITLIKALFKEGM 699

Query: 173 VDKAKEL 179
            ++  E+
Sbjct: 700 NEEMSEV 706


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 220/418 (52%), Gaps = 31/418 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++NIL+  L      +  + +   +   G  P+  TY+ L+  FC+ G++  
Sbjct: 4   HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63

Query: 65  GFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +   +     A PN+VTF S++ GLC   R+  A  +F ++   G  P+V++YNTL+
Sbjct: 64  AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123

Query: 124 NGLCRTGHTIVALNLFKEMTN--------------------GNGEIGVVF---------K 154
           +G C+ G    +L +F EMT                     GN E  V           +
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VT++ +IDG CK+GF+D A     +M+   + P+VV Y +LI+G+C     + A+ L
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + EM  + V+P+VV+ + I++  CK G +D+A +L   M++  V P+A TY++L+ G C 
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             ++N   ELF +M  +G + D+F+Y  LI+G+CK   VE+ALSL++E+  KG+ P VVT
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           Y+ L +GL +  + + A +L  ++   D   D   Y   +   C + + +   A  KG
Sbjct: 364 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKG 420



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 181/337 (53%), Gaps = 30/337 (8%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG- 130
           ++R   APNV T+  L++ LCA  R+ EA  +   ++  GC PN +TYNTL+   CR G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 131 ----HTIVAL---------NL--FKEMTNGNGEIGVV--------------FKPNTVTYS 161
                 +V+L         NL  F  M NG  + G +                P+ V+Y+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            ++ G CK G + ++  +F +M    L P+VVT+TSLIH  C A +  +A  L+ +M ++
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G++ N V+   +++  CK G +D+A   ++ M +C ++P+   YN L++G+C  G+++  
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +EL   ME+   K D  +Y+ +I+GYCK   ++ A  L  ++  KG+ P  +TY++L  G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L E ++   A +LF  M    V  D  TY T IDG C
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 337



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 200/399 (50%), Gaps = 21/399 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    + P + +FN ++  L K    +    +F  +   GL PD+ +Y+ L++ +CK+G
Sbjct: 71  MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F  + +    P+VVTFTSLI   C    + +A AL  +++  G   N +T+ 
Sbjct: 131 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 190

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G C+ G    AL   +EM           +P+ V Y+ +I+G CK G +D A+EL 
Sbjct: 191 ALIDGFCKKGFLDDALLAVEEMRKCG------IQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M+ + + P+VVTY+++I G+C   + + A  L  +M+ +GV P+ ++ + ++  LC+ 
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++++A  L + M+Q  V+P+ FTY TL+DG C  G + +   L   M   G   D  +Y
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL--------FHGLFEIRQA---- 348
           ++LING  K+   +EA  L  +L  +   P  + Y+ L        F  +  + +     
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424

Query: 349 ---ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              + A K++  M   +   D   Y   I G C    VR
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 187/392 (47%), Gaps = 47/392 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N LL    K       L++F  +   GL PD+ T++ LI+  CK G +     +
Sbjct: 114 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 173

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++       N VTFT+LI G C +  + +A     +++  G +P+V+ YN LING C+
Sbjct: 174 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 233

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
            G   +A  L +EM                      G +   F+           P+ +T
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I GLC+E  ++ A ELF  M    + P+  TYT+LI G C   +  +A  L  EM+
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM---------- 269
            +GV P+VV+ +V++N L K+ +   A RLL  +   D  P+   Y+ LM          
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413

Query: 270 -----DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
                 GFC+ G +    +++ SM     K D   Y+ILI+G+C+   V +ALS + ++ 
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473

Query: 325 FKGIKPTVVTYNTLFHGLFE---IRQAERALK 353
             G  P   +  +L  GLFE   + +A+ A++
Sbjct: 474 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQ 505



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 56/334 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+    K    D    L + + +  + PD+ TYS +I+ +CK+G +   F +
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 278

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L+    P+ +T++SLI+GLC E R+ +A  LF  +   G +P+  TY TLI+G C+
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  EM       GV+  P+ VTYS++I+GL K     +A  L  ++ +E+ 
Sbjct: 339 EGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392

Query: 189 NPNVVTYTSL-------------------------------------------------- 198
            P+ + Y +L                                                  
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           IHG C   +  +A     +M+  G  PN  S+  ++  L + G +  A   +  ++ C  
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 512

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             +A     L+D     G ++ + ++   M   G
Sbjct: 513 LADAEASKALIDLNRKEGNVDALIDVLCGMARDG 546


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 199/378 (52%), Gaps = 14/378 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGF 66
           P V S+N LL  L K + +     L + + S G    PDL TYS L++ +CK G+V    
Sbjct: 43  PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESR 102

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P+ + +T ++  LC  +R+ EA  L  ++   GC P +IT+NTLI+G 
Sbjct: 103 ELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR  +  +A +L + M           K + VTY+ ++DGLCK G + +A++L  +MK  
Sbjct: 163 CREKNLEMADSLLQTMAASG------VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+VV Y+S ++G C +     A  +L +M D    PNVV+ N I++ LCK+GK+D A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 247 SRLLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
             +++ M   D    N   Y+T++DG C  G+    + +  +M   GC+ D  +Y+ L+N
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK  ++EEA+    E+  +G KP  VTY +L HGL    +   A ++  EM       
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 366 DTC-----TYRTFIDGLC 378
           D C     TY   I GLC
Sbjct: 397 DHCPPSVSTYNALIGGLC 414



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 187/377 (49%), Gaps = 12/377 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + +++ LL    K    +    L K + S GL PD   Y+ ++   CK  ++    
Sbjct: 78  STPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEAL 137

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++R+   P ++TF +LI G C E  +  A +L   + A G + +V+TYNTL++GL
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGL 197

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  L + M            P+ V YS  + GLCK G V  A ++  QM+  
Sbjct: 198 CKAGRLQEAEQLLERMKASG------CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDN 245
           + +PNVVTY +++ G C +   + A  ++ +M    G   NVV  + +++ LCK G+   
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +++ M +   RP+  TY++L++G C  GKI    E    M   GCK +  +Y  L++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 306 GYCKNKEVEEALSLYNELPFKGIK-----PTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           G C    + EA  +  E+   G       P+V TYN L  GL +  + + ALK F  M+ 
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 361 NDVAADTCTYRTFIDGL 377
                D  +Y T ++GL
Sbjct: 432 QGCDPDGVSYSTIVEGL 448



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 12/349 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  ++  L K+      L L + +   G  P L T++ LI+  C+   + +   +
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S    +VVT+ +L+ GLC   R+ EA  L  ++KA GC P+V+ Y++ + GLC+
Sbjct: 175 LQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           +G  + A  + ++M + +        PN VTY+ I+DGLCK G +D A E+  QM   + 
Sbjct: 235 SGKVLNAHQVLEQMRDSD------HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              NVV Y++++ G C      EA+ ++  M   G +P+VV+ + ++N LCK GK++ A 
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-----CKHDDFSYNI 302
             +  M     +PNA TY +L+ G C  G++   + +   M S G     C     +YN 
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNA 408

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           LI G CK   +++AL  +  +  +G  P  V+Y+T+  GL    +A +A
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 161/306 (52%), Gaps = 5/306 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   PN VTF +L+ G   + R  +   L   + A G +PNV++YN L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L ++M +  G       P+ VTYS ++ G CK G V++++EL  ++    L P+ +
Sbjct: 63  EAEELVRDMISRGGR----STPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT ++   C +    EA  LL EM+  G  P +++ N +++  C+   ++ A  LL  M
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               V+ +  TYNTLMDG C  G++   ++L   M++ GC  D  +Y+  + G CK+ +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRT 372
             A  +  ++      P VVTYNT+  GL +  + + AL++  +M  +D    +   Y T
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 373 FIDGLC 378
            +DGLC
Sbjct: 299 VVDGLC 304



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+  GC  +  ++N L+NG+ K     +   L   +  +GI+P VV+YN L  GL ++ +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 348 AERALKLFVEM--QGNDVAADTCTYRTFIDGLC 378
              A +L  +M  +G     D  TY T + G C
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYC 93



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           PP VS++N L+G L K    D  L  F+R+ S G  PD  +YS ++    + G+ 
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+I++NC CK GQ+     I
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ TF +LI  LC  +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF+EM N          P+ VTY+ +ID LC  G + KA +L   M+    
Sbjct: 404 VGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY ++I G C      EA+ +  +M  QG+  N ++ N +++ LCK+ K+D+A  
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M+   ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING C
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + AL +   +  KG++PT   YN +   LF       AL LF EM       D  
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 638 TYKIVFRGLC 647



 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 193/376 (51%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L    +   VT   LI G C   R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL +   M     +      P+  TY+I+++ LCK G +++AK +  QM     
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ +LI   C  N   EA  L  ++  +GV P+V + N+++N LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYNTL+D  C  GK+ +  +L   MES GC     +YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI    +T+NTL  GL + ++ + A +L  +M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 533 TYNSILTHYCKQGDIK 548



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 188/379 (49%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN L+  L      +  L L +++   G+ PD+YT++ILIN  CK+G   L   +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+ +LI  LC+  ++ +A  L   +++ GC  + ITYNT+I+GLC+
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M             N +T++ +IDGLCK+  +D A EL  QM  E L
Sbjct: 474 KMRIEEAEEVFDQMDLQG------ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M    +RP    YN ++        I     LF  M  +G   D  +Y I+  G C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    ++EA     E+  KG  P   ++  L  GL  +   +   RA+++ +E   ++ +
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRES 707

Query: 362 DVAA--DTCTYRTFIDGLC 378
           DV+A       R F D L 
Sbjct: 708 DVSAIRGYLKIRKFYDALA 726



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 177/357 (49%), Gaps = 7/357 (1%)

Query: 28  DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           D V  +  +L  + G+  D   Y+ L+N   +  ++ L   ++  +      P+VVTF +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+K LC   ++  A  +  ++ + G  P+  T+ TL+ G    G    AL +   M    
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML--- 243

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E+G       VT +++I+G CK G V+ A     Q   +   P+ +TY + ++G C  +
Sbjct: 244 -EMGC--SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A  ++  MV +G  P+V + N+++N LCKNG+++ A  +L+ MV     P+  T+N
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+   C   ++    +L   +   G   D +++NILIN  CK  +   AL L+ E+   
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  P  VTYNTL   L  + +  +AL L  +M+       T TY T IDGLC + ++
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N+L+    K    +  L   ++  + G  PD  TY+  +N  C+   V     +   +
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           ++    P+V T+  ++  LC   ++ EA  +  ++   GC P++ T+NTLI  LC     
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L +++T           P+  T++I+I+ LCK G    A  LF +MK     P+ 
Sbjct: 373 EEALDLARQVTVKG------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI   C      +A  LL +M   G   + ++ N I++ LCK  +++ A  + D 
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  NA T+NTL+DG C   KI+   EL   M S G + ++ +YN ++  YCK  +
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A  +   +   G +  VVTY TL +GL +  + + ALK+   M+   +      Y  
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 373 FIDGLCVRPQVR 384
            +  L  R  +R
Sbjct: 607 VLQSLFRRNNIR 618



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 172/401 (42%), Gaps = 11/401 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSIGLFPDLYTYSILINCFCKMG 60
           R     P   +    LL  L +    D  L +    L      P    Y  +I     +G
Sbjct: 29  RASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG 88

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKA-FGCEPNVIT 118
            + L  V+   + R      +    S +     +    +A  L   +L+  FG + + + 
Sbjct: 89  ALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVV 148

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L+N L       +  +++ EM    G  G+  KP+ VT++ ++  LC+   V  A  
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +  +M    + P+  T+T+L+ GF        A  +   M++ G     V+ NV++N  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G++++A   +   +     P+  TYNT ++G C    +    ++   M   G   D F
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++N  CKN ++EEA  + N++  +G  P + T+NTL   L    + E AL L  ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 359 QGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
               V+ D  T+   I+ LC    P +         NSG T
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F +++  G+  +  T++ LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++     PN +T+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL + + M           +P    Y+ ++  L +   +  A  LF +M    
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +  G C       EA   ++EMVD+G  P   S  ++   L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 247 SRLLD-LMVQCDVR 259
            R ++ +M + D+R
Sbjct: 692 IRAIEIIMEKVDLR 705


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 220/418 (52%), Gaps = 31/418 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++NIL+  L      +  + +   +   G  P+  TY+ L+  FC+ G++  
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205

Query: 65  GFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +   +     A PN+VTF S++ GLC   R+  A  +F ++   G  P+V++YNTL+
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 124 NGLCRTGHTIVALNLFKEMTN--------------------GNGEIGVVF---------K 154
           +G C+ G    +L +F EMT                     GN E  V           +
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VT++ +IDG CK+GF+D A     +M+   + P+VV Y +LI+G+C     + A+ L
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + EM  + V+P+VV+ + I++  CK G +D+A +L   M++  V P+A TY++L+ G C 
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             ++N   ELF +M  +G + D+F+Y  LI+G+CK   VE+ALSL++E+  KG+ P VVT
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           Y+ L +GL +  + + A +L  ++   D   D   Y   +   C + + +   A  KG
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKG 562



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 181/337 (53%), Gaps = 30/337 (8%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG- 130
           +LR   APNV T+  L++ LCA  R+ EA  +   ++  GC PN +TYNTL+   CR G 
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 131 ----HTIVAL---------NL--FKEMTNGNGEIGVV--------------FKPNTVTYS 161
                 +V+L         NL  F  M NG  + G +                P+ V+Y+
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            ++ G CK G + ++  +F +M    L P+VVT+TSLIH  C A +  +A  L+ +M ++
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G++ N V+   +++  CK G +D+A   ++ M +C ++P+   YN L++G+C  G+++  
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +EL   ME+   K D  +Y+ +I+GYCK   ++ A  L  ++  KG+ P  +TY++L  G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L E ++   A +LF  M    V  D  TY T IDG C
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 200/399 (50%), Gaps = 21/399 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    + P + +FN ++  L K    +    +F  +   GL PD+ +Y+ L++ +CK+G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F  + +    P+VVTFTSLI   C    + +A AL  +++  G   N +T+ 
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G C+ G    AL   +EM           +P+ V Y+ +I+G CK G +D A+EL 
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCG------IQPSVVCYNALINGYCKLGRMDLARELI 386

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M+ + + P+VVTY+++I G+C   + + A  L  +M+ +GV P+ ++ + ++  LC+ 
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++++A  L + M+Q  V+P+ FTY TL+DG C  G + +   L   M   G   D  +Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL--------FHGLFEIRQA---- 348
           ++LING  K+   +EA  L  +L  +   P  + Y+ L        F  +  + +     
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 349 ---ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              + A K++  M   +   D   Y   I G C    VR
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 187/392 (47%), Gaps = 47/392 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N LL    K       L++F  +   GL PD+ T++ LI+  CK G +     +
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++       N VTFT+LI G C +  + +A     +++  G +P+V+ YN LING C+
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
            G   +A  L +EM                      G +   F+           P+ +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I GLC+E  ++ A ELF  M    + P+  TYT+LI G C   +  +A  L  EM+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM---------- 269
            +GV P+VV+ +V++N L K+ +   A RLL  +   D  P+   Y+ LM          
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555

Query: 270 -----DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
                 GFC+ G +    +++ SM     K D   Y+ILI+G+C+   V +ALS + ++ 
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615

Query: 325 FKGIKPTVVTYNTLFHGLFE---IRQAERALK 353
             G  P   +  +L  GLFE   + +A+ A++
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQ 647



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 56/334 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+    K    D    L + + +  + PD+ TYS +I+ +CK+G +   F +
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L+    P+ +T++SLI+GLC E R+ +A  LF  +   G +P+  TY TLI+G C+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  EM       GV+  P+ VTYS++I+GL K     +A  L  ++ +E+ 
Sbjct: 481 EGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 189 NPNVVTYTSL-------------------------------------------------- 198
            P+ + Y +L                                                  
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           IHG C   +  +A     +M+  G  PN  S+  ++  L + G +  A   +  ++ C  
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             +A     L+D     G ++ + ++   M   G
Sbjct: 655 LADAEASKALIDLNRKEGNVDALIDVLCGMARDG 688


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+I++NC CK GQ+     I
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ TF +LI  LC  +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF+EM N          P+ VTY+ +ID LC  G + KA +L   M+    
Sbjct: 404 VGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY ++I G C      EA+ +  +M  QG+  N ++ N +++ LCK+ K+D+A  
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M+   ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING C
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + AL +   +  KG++PT   YN +   LF       AL LF EM       D  
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 638 TYKIVFRGLC 647



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 193/376 (51%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L    +   VT   LI G C   R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL +   M     +      P+  TY+I+++ LCK G +++AK +  QM     
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ +LI   C  N   EA  L  ++  +GV P+V + N+++N LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYNTL+D  C  GK+ +  +L   MES GC     +YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI    +T+NTL  GL + ++ + A +L  +M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 533 TYNSILTHYCKQGDIK 548



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 188/379 (49%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN L+  L      +  L L +++   G+ PD+YT++ILIN  CK+G   L   +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+ +LI  LC+  ++ +A  L   +++ GC  + ITYNT+I+GLC+
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M             N +T++ +IDGLCK+  +D A EL  QM  E L
Sbjct: 474 KMRIEEAEEVFDQMDLQG------ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M    +RP    YN ++        I     LF  M  +G   D  +Y I+  G C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    ++EA     E+  KG  P   ++  L  GL  +   +   RA+++ +E   ++ +
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRES 707

Query: 362 DVAA--DTCTYRTFIDGLC 378
           DV+A       R F D L 
Sbjct: 708 DVSAIRGYLKIRKFYDALA 726



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 177/357 (49%), Gaps = 7/357 (1%)

Query: 28  DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           D V  +  +L  + G+  D   Y+ L+N   +  ++ L   ++  +      P+VVTF +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+K LC   ++  A  +  ++ + G  P+  T+ TL+ G    G    AL +   M    
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML--- 243

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E+G       VT +++I+G CK G V+ A     Q   +   P+ +TY + ++G C  +
Sbjct: 244 -EMGC--SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A  ++  MV +G  P+V + N+++N LCKNG+++ A  +L+ MV     P+  T+N
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+   C   ++    +L   +   G   D +++NILIN  CK  +   AL L+ E+   
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  P  VTYNTL   L  + +  +AL L  +M+       T TY T IDGLC + ++
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N+L+    K    +  L   ++  + G  PD  TY+  +N  C+   V     +   +
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           ++    P+V T+  ++  LC   ++ EA  +  ++   GC P++ T+NTLI  LC     
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L +++T           P+  T++I+I+ LCK G    A  LF +MK     P+ 
Sbjct: 373 EEALDLARQVTVKG------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI   C      +A  LL +M   G   + ++ N I++ LCK  +++ A  + D 
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  NA T+NTL+DG C   KI+   EL   M S G + ++ +YN ++  YCK  +
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A  +   +   G +  VVTY TL +GL +  + + ALK+   M+   +      Y  
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606

Query: 373 FIDGLCVRPQVR 384
            +  L  R  +R
Sbjct: 607 VLQSLFRRNNIR 618



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 172/401 (42%), Gaps = 11/401 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSIGLFPDLYTYSILINCFCKMG 60
           R     P   +    LL  L +    D  L +    L      P    Y  +I     +G
Sbjct: 29  RASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG 88

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKA-FGCEPNVIT 118
            + L  V+   + R      +    S +     +    +A  L   +L+  FG + + + 
Sbjct: 89  ALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVV 148

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L+N L       +  +++ EM    G  G+  KP+ VT++ ++  LC+   V  A  
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCRAHQVRTAVI 202

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +  +M    + P+  T+T+L+ GF        A  +   M++ G     V+ NV++N  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G++++A   +   +     P+  TYNT ++G C    +    ++   M   G   D F
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++N  CKN ++EEA  + N++  +G  P + T+NTL   L    + E AL L  ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 359 QGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
               V+ D  T+   I+ LC    P +         NSG T
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F +++  G+  +  T++ LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++     PN +T+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL + + M           +P    Y+ ++  L +   +  A  LF +M    
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +  G C       EA   ++EMVD+G  P   S  ++   L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 247 SRLLD-LMVQCDVR 259
            R ++ +M + D+R
Sbjct: 692 IRAIEIIMEKVDLR 705


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 203/398 (51%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S++N ++  L K +  D   ++ +++   G+ PD +TY+ LI  +   GQ      +
Sbjct: 249 PDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRV 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+VVT  SL+  LC   +I +A  +F  +   G + ++ +Y  ++NG   
Sbjct: 309 SKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT 368

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVF----------------------------KPNTVT 159
            G  +    LF  M ++G      +F                            +P+ VT
Sbjct: 369 KGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVT 428

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I  LC+ G +D A E F QM  + + P++ TY  LI GFC   D  +AK L+++M+
Sbjct: 429 YSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G++P++   N I+N LCK G++ +A  + D  +   + PN   YNTLMDG+CL GK+ 
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +F  M S G + +   Y  L+NGYCK   ++E LSL+ E+  KGIKP+   YN + 
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           HGLF+  +   A   F EM  + +A D  TY   + GL
Sbjct: 609 HGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 180/354 (50%), Gaps = 9/354 (2%)

Query: 30  VLSLFKRLNSIG----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
            ++LF R++       L P L+TY IL++C  +  +  L    FG++L++    + +  +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 86  SLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           +L++GLC   R  EA   L  ++   GC P+V +Y  ++  LC    +  A  L + M  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
           G    G V  PN V Y+ +IDG  KEG V+KA +LF +M    ++P++ TY  +++  C 
Sbjct: 208 G----GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK 263

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A   ++A+ +L +MVD+GV P+  + N ++      G+   A R+   M    + P+  T
Sbjct: 264 ARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVT 323

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            N+LM   C  GKI   +++F SM   G K D FSY I++NGY     + +   L+N + 
Sbjct: 324 LNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLML 383

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GI P    +N L     +    +RA  +F EM+   V  D  TY T I  LC
Sbjct: 384 SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALC 437



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L K+        +F  +   G   D+++Y I++N +   G +     +
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    AP+   F  LIK       +  A  +F +++  G EP+V+TY+T+I  LCR
Sbjct: 379 FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+  F +M +     GV   P+  TY  +I G C  G + KAK+L LQM  + +
Sbjct: 439 IGKMDDAVEKFNQMIDQ----GVA--PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGM 492

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  +  +I+  C      +A+ +    +  G+ PNV+  N +M+  C  GKM+NA R
Sbjct: 493 RPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALR 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D+MV   ++PN   Y TL++G+C  G+I+    LF  +   G K     YNI+++G  
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +      A   ++E+   GI     TY+ +  GLF+   ++ A+ LF E+   +V  D  
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDIT 672

Query: 369 TYRTFIDGL 377
           T    I G+
Sbjct: 673 TLNIMIAGM 681



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ I+L   A       +  LF  + S G+ PD + +++LI  + K G +    +IF  +
Sbjct: 358 SYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM 417

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P+VVT++++I  LC   ++ +A   F ++   G  P++ TY+ LI G C  G  
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDL 477

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A +L  +M N         +P+   ++ II+ LCK G V  A+ +F       L+PNV
Sbjct: 478 LKAKDLVLQMMNKG------MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNV 531

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + Y +L+ G+C       A  +   MV  G+QPNVV    ++N  CK G++D    L   
Sbjct: 532 MVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           ++   ++P+   YN ++ G    G+    K  F  M   G   D ++Y+I++ G  KN  
Sbjct: 592 ILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSC 651

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            +EA+ L+ EL    +K  + T N +  G+F+IR+ E A  LF  +  + +     TY  
Sbjct: 652 SDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSI 711

Query: 373 FIDGL 377
            +  L
Sbjct: 712 MMTNL 716



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    +    LF  +   G+ PDL TY+ ++N  CK   +     I
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P+  T+ SLI G  +  +  EA  +  K+ + G  P+V+T N+L+  LC+
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A ++F  M    G+     K +  +Y I+++G   +G +    ELF  M  + +
Sbjct: 334 HGKIKDARDVFDSMAM-KGQ-----KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   +  LI  +      + A  +  EM +QGV+P+VV+ + ++  LC+ GKMD+A  
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M+   V P+  TY+ L+ GFC  G + + K+L + M + G + D   +N +IN  C
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V +A ++++     G+ P V+ YNTL  G   + + E AL++F  M    +  +  
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVV 567

Query: 369 TYRTFIDGLC 378
            Y T ++G C
Sbjct: 568 VYGTLVNGYC 577



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FN+L+   AK    D    +F  +   G+ PD+ TYS +I   C++G++      
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    AP++ T+  LI+G C    +++A  L  ++   G  P++  +N +IN LC+
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F      +  I +   PN + Y+ ++DG C  G ++ A  +F  M    +
Sbjct: 509 LGRVMDAQNIF------DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGI 562

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y +L++G+C     +E   L  E++ +G++P+    N+I++ L + G+   A  
Sbjct: 563 QPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKV 622

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  + +TY+ ++ G       +    LF  + +M  K D  + NI+I G  
Sbjct: 623 KFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMF 682

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           + + VEEA  L+  +   G+ P+VVTY+ +   L +    E A  +F  M+
Sbjct: 683 QIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 13/387 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L +    D  +  F ++   G+ P + TY  LI  FC  G +     +
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++  F  +I  LC   R+++A  +F    + G  PNV+ YNTL++G C 
Sbjct: 484 VLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCL 543

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M +         +PN V Y  +++G CK G +D+   LF ++ ++ +
Sbjct: 544 VGKMENALRVFDVMVSAG------IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  ++HG   A     AK    EM + G+  +  + ++++  L KN   D A  
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +   +V+ +  T N ++ G     ++   K+LF S+   G      +Y+I++    
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717

Query: 309 KNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K   VEEA  +++ +   G  +P     N +   L E R+  RA     ++     + D 
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDH 777

Query: 368 CTYRTFID-----GLCVRPQVRFTYAR 389
            T    ID     G C R  +RF  A+
Sbjct: 778 STTTLLIDLFSSKGTC-REHIRFLPAK 803



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 6/261 (2%)

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G  + A+ LF  ++  +G    V  P   TY I++D   +          F Q+   
Sbjct: 81  CRDGPAL-AVALFNRVSRAHGP--RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKT 137

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            L  + +  ++L+ G C A    EA  +L+  M   G  P+V S  +++  LC + K   
Sbjct: 138 GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQ 197

Query: 246 ASRLLDLMVQCDV--RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           A  LL +M +      PNA  YNT++DGF   G +N+  +LF  M   G   D  +YN +
Sbjct: 198 ADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCV 257

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           +N  CK + +++A ++  ++  KG+ P   TYN+L +G     Q + A+++  +M    +
Sbjct: 258 VNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317

Query: 364 AADTCTYRTFIDGLCVRPQVR 384
             D  T  + +  LC   +++
Sbjct: 318 LPDVVTLNSLMASLCKHGKIK 338



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 13/288 (4%)

Query: 100 AAALFTKL-KAFG---CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           A ALF ++ +A G     P + TY  L++   R     + L  F ++      +G+    
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTG--LGI---- 141

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFL-QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           +T+  S ++ GLC+     +A ++ L +M +    P+V +Y  ++   C      +A  L
Sbjct: 142 DTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADEL 201

Query: 215 LIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           L  M + G    PN V+ N +++   K G ++ A  L + MVQ  + P+  TYN +++  
Sbjct: 202 LRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNAL 261

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C    +++ + +   M   G   D+++YN LI GY    + +EA+ +  ++  +GI P V
Sbjct: 262 CKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDV 321

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VT N+L   L +  + + A  +F  M       D  +Y+  ++G   +
Sbjct: 322 VTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +    LF+ +   G+ PD+Y Y+ LI+ FCK G +      
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R   APNVVT+T+LI       ++ +A  ++  + + GC PN++TY  LI+GLC+
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            G    A  ++K M   N EI           G   +PN  TY  ++DGLCK   V +A+
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN V Y +LI G C A   +EA+ +   M++ G  PNV + + +++ L
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D A ++L  M++    PN   Y  ++DG C  GK +   +L V ME  GC  + 
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K+  VE+ L L  ++  KG  P  VTY  L +        + A KL  E
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M+          YR  I+G 
Sbjct: 580 MKQTYWPRHVAGYRKVIEGF 599



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 183/376 (48%), Gaps = 23/376 (6%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     ++   ++ + + S G  PD  TYS +I   C   +V   F +F  + R+  AP
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V  +T+LI   C    I +A   F +++  GC PNV+TY  LI+   ++   +   N  
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKS-RKVSKANEV 314

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN---------- 189
            EM    G       PN VTY+ +IDGLCK G ++KA +++  MK EN+           
Sbjct: 315 YEMMLSKG-----CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRV 369

Query: 190 -------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
                  PNV TY +L+ G C A    EA+ LL  M  +G +PN V  + +++  CK GK
Sbjct: 370 VDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGK 429

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D A  +   M++C   PN +TY++L+D      +++   ++   M    C  +   Y  
Sbjct: 430 LDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE 489

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+G CK  + +EA  L   +  KG  P VVTY  +  G  +  + E+ L+L  +M    
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549

Query: 363 VAADTCTYRTFIDGLC 378
            A +  TYR  I+  C
Sbjct: 550 CAPNFVTYRVLINHCC 565



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 188/407 (46%), Gaps = 68/407 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K++       +++ + S G  P++ TY+ LI+  CK G++     I
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349

Query: 69  FGRILR------------------SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           + +I++                  +   PNV T+ +L+ GLC   ++ EA  L   +   
Sbjct: 350 Y-KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE---------IGVVFK------- 154
           GCEPN + Y+ LI+G C+ G    A  +F  M     +         I  +FK       
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468

Query: 155 -------------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                        PN V Y+ +IDGLCK G  D+A +L + M+ +  NPNVVTYT++I G
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDG 528

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F  +    +   LL +M  +G  PN V+  V++N  C  G +D A +LL+ M Q     +
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRH 588

Query: 262 AFTYNTLMDGFCLTGKINR--VKELFVSMESMGCKHDDFS----YNILINGYCKNKEVEE 315
              Y  +++GF      NR  +  L++S E    ++D       Y +LI+ + K   +E 
Sbjct: 589 VAGYRKVIEGF------NREFIASLYLSFEI--SENDSVPVAPVYRVLIDNFIKAGRLEI 640

Query: 316 ALSLYNEL----PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           AL L  EL    PF      +  + TL   L    +A++A +L+ +M
Sbjct: 641 ALELNEELSSFSPFSAANQNI--HITLIENLSLAHKADKAFELYADM 685



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 180/381 (47%), Gaps = 20/381 (5%)

Query: 18  LGCLA----KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           LGC A    K+  +   LSL ++   +   PD   Y+ +I+  C+            R+ 
Sbjct: 13  LGCFAHSLCKSGKWREALSLLEKEEFV---PDTVLYTKMISGLCEASLFEEAMDFLTRMR 69

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S   PNV+T+  L+ G   + ++     + + +   GC P+   +N+L++  CR+G   
Sbjct: 70  ASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYA 129

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK-----EGFVDKAKELFLQMKYENL 188
            A  L K+M     +      P  V Y+I+I G+C      +  +D A++ + +M    +
Sbjct: 130 YAYKLLKKMVQCGCQ------PGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGV 183

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V  ++     C    + +A  ++ EM+ +G  P+  + + ++  LC   K++ A +
Sbjct: 184 VLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  + P+ + Y TL+D FC  G I + +  F  ME  GC  +  +Y  LI+ Y 
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA-ADT 367
           K+++V +A  +Y  +  KG  P +VTY  L  GL +  + E+A +++  M+  +V   D 
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
             +   +DG    P V FTY 
Sbjct: 364 DMHFRVVDGASNEPNV-FTYG 383



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  L K    D    L   +   G  P++ TY+ +I+ F K G+V     +
Sbjct: 482 PNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL 541

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     APN VT+  LI   C+   + EA  L  ++K      +V  Y  +I G  R
Sbjct: 542 LQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR 601

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
               I +L L  E++  +        P    Y ++ID   K G ++ A EL  ++     
Sbjct: 602 --EFIASLYLSFEISENDS------VPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSP 653

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           +   N N+  + +LI     A+  ++A  L  +M+ +G  P +     ++  L +  + +
Sbjct: 654 FSAANQNI--HITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWE 711

Query: 245 NASRLLD 251
            A +LLD
Sbjct: 712 EALQLLD 718



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M +MG + D+F+     +  CK+ +  EALSL  +  F    P  V Y  +  GL E   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEF---VPDTVLYTKMISGLCEASL 57

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDG 376
            E A+     M+ +    +  TYR  + G
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCG 86



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 5/162 (3%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M   G + +  +     + LCK+GK   A   L L+ + +  P+   Y  ++ G C    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREA---LSLLEKEEFVPDTVLYTKMISGLCEASL 57

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKE-VEEALSLYNELPFKGIKPTVVTYN 336
                +    M +  C  +  +Y IL+ G C NKE +     + + +  +G  P+   +N
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCG-CLNKEKLGRCKRILSMMITEGCYPSPRIFN 116

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L H          A KL  +M           Y   I G+C
Sbjct: 117 SLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K KH D  L+LFK + + G+ P++ TYS LI+C C  G+ S    +
Sbjct: 49  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 108

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V TF++LI     E ++VEA  L+ ++     +P+++TY++LING C 
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 168

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+ M + +      F P+ VTY+ +I G CK   V++  E+F +M    L
Sbjct: 169 HDRLDEAKQMFEFMVSKH-----CF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY  LI G   A D + A+ +  EMV  GV PN+++ N +++ LCKNGK++ A  
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 282

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +  + P  +TYN +++G C  GK+    +LF ++   G K D  +YN +I+G+C
Sbjct: 283 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    EEA +L+ E+   G  P    YNTL          E + +L  EM+    A D  
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 402

Query: 369 T 369
           T
Sbjct: 403 T 403



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 108/294 (36%), Positives = 174/294 (59%), Gaps = 11/294 (3%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
           AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G        +P  + Y+
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYN 55

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            IIDGLCK   +D A  LF +M+ + + PNVVTY+SLI   C+   W++A  LL +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            + P+V + + +++   K GK+  A +L D MV+  + P+  TY++L++GFC+  +++  
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           K++F  M S  C  D  +YN LI G+CK K VEE + ++ E+  +G+    VTYN L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARR 390
           LF+    + A ++F EM  + V  +  TY T +DGLC      +  V F Y +R
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           ++L  R+ + G  PDL TY +++N  CK G   L F +  ++ +    P V+ + ++I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC    + +A  LF +++  G  PNV+TY++LI+ LC  G    A  L  +M      I 
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM------IE 114

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+  T+S +ID   KEG + +A++L+ +M   +++P++VTY+SLI+GFC  +  +E
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           AK +   MV +   P+VV+ N ++   CK  +++    +   M Q  +  N  TYN L+ 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G    G  +  +E+F  M S G   +  +YN L++G CKN ++E+A+ ++  L    ++P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           T+ TYN +  G+ +  + E    LF  +    V  D   Y T I G C +
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 9/245 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K K  +  + +F+ ++  GL  +  TY+ILI    + G   +   I
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN++T+ +L+ GLC   ++ +A  +F  L+    EP + TYN +I G+C+
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +LF  ++      GV  KP+ V Y+ +I G C++G  ++A  LF +MK +  
Sbjct: 309 AGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN   Y +LI       D   +  L+ EM   G   +  +  ++ N L  +G++D +  
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 419

Query: 249 LLDLM 253
            LD++
Sbjct: 420 FLDML 424



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 71/135 (52%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N LL  L KN   +  + +F+ L    + P +YTY+I+I   CK G+V  G+ 
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+VV + ++I G C +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 128 RTGHTIVALNLFKEM 142
           R G    +  L KEM
Sbjct: 378 RDGDREASAELIKEM 392


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 187/342 (54%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   GL  D  TY+ LIN  C+ G++     +   +L      + VT+T L+ G C 
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA  +   +   G  PNV+TY  L +GLC+ G    A  L  EM+N   E+    
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL---- 502

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N  TY+ +I+GLCK G++D+A      M    L P+V TYT+LI   C + + + A  
Sbjct: 503 --NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+D G++P +V+ NV+MN  C +G+++   +LL+ M++ ++ PNA TYN+LM  +C
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC 620

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M S   + ++ +YNILI G+CK + ++EA   +NE+  KG + T  
Sbjct: 621 IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTAS 680

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +Y+ L   L + ++   A KLF +M+     A+   Y  +ID
Sbjct: 681 SYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 9/382 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NILL  L      +    LF  + S    PD+ TY ILI+ +C +G++     +  
Sbjct: 262 VCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLD 318

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PN   +TS++  LC + R+ +A  +   +       +   Y T+++G C  G
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             + A   F EM             + VTY+ +I+GLC+ G + +A+++  +M    L+ 
Sbjct: 379 DLVSARRWFDEMQRKG------LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV 432

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTYT L+ G+C      EA  +   MV +GV PNVV+   + + LCK G +  A+ LL
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    +  NA TYN+L++G C  G +++       M++ G K D ++Y  LI+  CK+
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            E++ A  L  E+   GIKPT+VTYN L +G     + E   KL   M   ++  +  TY
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612

Query: 371 RTFIDGLCVRPQVRFTYARRKG 392
            + +   C+   ++ T    KG
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKG 634



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 184/401 (45%), Gaps = 47/401 (11%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +SF++LL CL           L +R+   G+ P          C   + ++ L   I   
Sbjct: 208 ASFDLLLLCLPS-------APLLRRVRQYGISPSPEA------CNAVLSRLPLDEAI--E 252

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           + +     NV ++  L+K LC   R+ +A  LF ++ +    P+V+TY  LI+G C  G 
Sbjct: 253 LFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGE 309

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVT-----------------------------YSI 162
              A+ L  +M     E       + V                              Y+ 
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G C +G +  A+  F +M+ + L  + VTYT+LI+G C A +  EA+ +L EM+ + 
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           +  + V+  V+++  CK GKM  A ++ + MVQ  V PN  TY  L DG C  G +    
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           EL   M + G + +  +YN LING CK   +++A+    ++   G+KP V TY TL   L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +  + +RA  L  EM  N +     TY   ++G C+  +V
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 8/217 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L K  + D  +     +++ GL PD+YTY+ LI+  CK G++     +   +
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L +   P +VT+  L+ G C   R+     L   +      PN  TYN+L+   C   + 
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                ++K M + N E      PN  TY+I+I G CK   + +A+    +M  +      
Sbjct: 626 KSTTEIYKGMCSRNVE------PNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTA 679

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNV 227
            +Y++LI        + EA+ L  +M  +G   +P+V
Sbjct: 680 SSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDV 716



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K+   D    L + +   G+ P + TY++L+N FC  G+V  G  +
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ SL+K  C  + +     ++  + +   EPN  TYN LI G C+
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A     EM      I   F+    +YS +I  L K+    +A++LF  M+ E  
Sbjct: 657 ARSMKEAQYFHNEM------IEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGF 710

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
                 Y   I  F    D  EA    + + D+ V+ ++V S   M++
Sbjct: 711 TAEPDVYNFYI-DFNFNEDNLEAT---LALCDELVEASIVKSKAEMDQ 754


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 220/418 (52%), Gaps = 31/418 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++NIL+  L      +  + +   +   G  P+  TY+ L+  FC+ G++  
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205

Query: 65  GFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +   +     A PN+VTF S++ GLC   R+  A  +F ++   G  P+V++YNTL+
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 124 NGLCRTGHTIVALNLFKEMTN--------------------GNGEIGVVF---------K 154
           +G C+ G    +L +F EMT                     GN E  V           +
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VT++ +IDG CK+GF+D A     +M+   + P+VV Y +LI+G+C     + A+ L
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + EM  + V+P+VV+ + I++  CK G +D+A +L   M++  V P+A TY++L+ G C 
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             ++N   ELF +M  +G + D+F+Y  LI+G+CK   VE+ALSL++E+  KG+ P VVT
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           Y+ L +GL +  + + A +L  ++   D   D   Y   +   C + + +   A  KG
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKG 562



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 181/337 (53%), Gaps = 30/337 (8%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG- 130
           +LR   APNV T+  L++ LCA  R+ EA  +   ++  GC PN +TYNTL+   CR G 
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 131 ----HTIVAL---------NL--FKEMTNGNGEIGVV--------------FKPNTVTYS 161
                 +V+L         NL  F  M NG  + G +                P+ V+Y+
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            ++ G CK G + ++  +F +M    L P+VVT+TSLIH  C A +  +A  L+ +M ++
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G++ N V+   +++  CK G +D+A   ++ M +C ++P+   YN L++G+C  G+++  
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +EL   ME+   K D  +Y+ +I+GYCK   ++ A  L  ++  KG+ P  +TY++L  G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L E ++   A +LF  M    V  D  TY T IDG C
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 203/399 (50%), Gaps = 21/399 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    + P + +FN ++  L K    +    +F  +   GL PD+ +Y+ L++ +CK+G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F  + +    P+VVTFTSLI   C    + +A AL  +++  G   N +T+ 
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G C+ G    AL   +EM     + G+  +P+ V Y+ +I+G CK G +D A+EL 
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMR----KCGI--QPSVVCYNALINGYCKLGRMDLARELI 386

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M+ + + P+VVTY+++I G+C   + + A  L  +M+ +GV P+ ++ + ++  LC+ 
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++++A  L + M+Q  V+P+ FTY TL+DG C  G + +   L   M   G   D  +Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL--------FHGLFEIRQA---- 348
           ++LING  K+   +EA  L  +L  +   P  + Y+ L        F  +  + +     
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 349 ---ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              + A K++  M   +   D   Y   I G C    VR
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 187/392 (47%), Gaps = 47/392 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N LL    K       L++F  +   GL PD+ T++ LI+  CK G +     +
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++       N VTFT+LI G C +  + +A     +++  G +P+V+ YN LING C+
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
            G   +A  L +EM                      G +   F+           P+ +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I GLC+E  ++ A ELF  M    + P+  TYT+LI G C   +  +A  L  EM+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM---------- 269
            +GV P+VV+ +V++N L K+ +   A RLL  +   D  P+   Y+ LM          
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555

Query: 270 -----DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
                 GFC+ G +    +++ SM     K D   Y+ILI+G+C+   V +ALS + ++ 
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615

Query: 325 FKGIKPTVVTYNTLFHGLFE---IRQAERALK 353
             G  P   +  +L  GLFE   + +A+ A++
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQ 647



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 56/312 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+    K    D    L + + +  + PD+ TYS +I+ +CK+G +   F +
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L+    P+ +T++SLI+GLC E R+ +A  LF  +   G +P+  TY TLI+G C+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  EM       GV+  P+ VTYS++I+GL K     +A  L  ++ +E+ 
Sbjct: 481 EGNVEKALSLHDEMIRK----GVL--PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 189 NPNVVTYTSL-------------------------------------------------- 198
            P+ + Y +L                                                  
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           IHG C   +  +A     +M+  G  PN  S+  ++  L + G +  A   +  ++ C  
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 259 RPNAFTYNTLMD 270
             +A     L+D
Sbjct: 655 LADAEASKALID 666


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+I++NC CK GQ+     I
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 251

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ TF +LI  LC  +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF+EM N          P+ VTY+ +ID LC  G + KA +L   M+    
Sbjct: 312 VGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 365

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY ++I G C      EA+ +  +M  QG+  N ++ N +++ LCK+ K+D+A  
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M+   ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING C
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + AL +   +  KG++PT   YN +   LF       AL LF EM       D  
Sbjct: 486 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 545

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 546 TYKIVFRGLC 555



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 193/376 (51%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L    +   VT   LI G C   R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL +   M     +      P+  TY+I+++ LCK G +++AK +  QM     
Sbjct: 207 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ +LI   C  N   EA  L  ++  +GV P+V + N+++N LCK G    A R
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 320

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYNTL+D  C  GK+ +  +L   MES GC     +YN +I+G C
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI    +T+NTL  GL + ++ + A +L  +M    +  +  
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 441 TYNSILTHYCKQGDIK 456



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 188/379 (49%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN L+  L      +  L L +++   G+ PD+YT++ILIN  CK+G   L   +
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+ +LI  LC+  ++ +A  L   +++ GC  + ITYNT+I+GLC+
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M             N +T++ +IDGLCK+  +D A EL  QM  E L
Sbjct: 382 KMRIEEAEEVFDQMDLQG------ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M    +RP    YN ++        I     LF  M  +G   D  +Y I+  G C
Sbjct: 496 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 555

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    ++EA     E+  KG  P   ++  L  GL  +   +   RA+++ +E   ++ +
Sbjct: 556 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRES 615

Query: 362 DVAA--DTCTYRTFIDGLC 378
           DV+A       R F D L 
Sbjct: 616 DVSAIRGYLKIRKFYDALA 634



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 177/358 (49%), Gaps = 7/358 (1%)

Query: 28  DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           D V  +  +L  + G+  D   Y+ L+N   +  ++ L   ++  +      P+VVTF +
Sbjct: 35  DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+K LC   ++  A  +  ++ + G  P+  T+ TL+ G    G    AL +   M    
Sbjct: 95  LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML--- 151

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E+G       VT +++I+G CK G V+ A     Q   +   P+ +TY + ++G C  +
Sbjct: 152 -EMGC--SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 208

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A  ++  MV +G  P+V + N+++N LCKNG+++ A  +L+ MV     P+  T+N
Sbjct: 209 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 268

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+   C   ++    +L   +   G   D +++NILIN  CK  +   AL L+ E+   
Sbjct: 269 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 328

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G  P  VTYNTL   L  + +  +AL L  +M+       T TY T IDGLC + ++ 
Sbjct: 329 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N+L+    K    +  L   ++  + G  PD  TY+  +N  C+   V     +   +
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           ++    P+V T+  ++  LC   ++ EA  +  ++   GC P++ T+NTLI  LC     
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L +++T           P+  T++I+I+ LCK G    A  LF +MK     P+ 
Sbjct: 281 EEALDLARQVTVKG------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI   C      +A  LL +M   G   + ++ N I++ LCK  +++ A  + D 
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  NA T+NTL+DG C   KI+   EL   M S G + ++ +YN ++  YCK  +
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A  +   +   G +  VVTY TL +GL +  + + ALK+   M+   +      Y  
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514

Query: 373 FIDGLCVRPQVR 384
            +  L  R  +R
Sbjct: 515 VLQSLFRRNNIR 526



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 8/290 (2%)

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
           FG + + + YN L+N L       +  +++ EM    G  G+  KP+ VT++ ++  LC+
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCR 101

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
              V  A  +  +M    + P+  T+T+L+ GF        A  +   M++ G     V+
Sbjct: 102 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 161

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            NV++N  CK G++++A   +   +     P+  TYNT ++G C    +    ++   M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   D F+YNI++N  CKN ++EEA  + N++  +G  P + T+NTL   L    + E
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
            AL L  ++    V+ D  T+   I+ LC    P +         NSG T
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 331



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 8/256 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F +++  G+  +  T++ LI+  CK  ++   F 
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++     PN +T+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL + + M           +P    Y+ ++  L +   +  A  LF +M    
Sbjct: 486 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +  G C       EA   ++EMVD+G  P   S  ++   L   G  D  
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 599

Query: 247 SRLLD-LMVQCDVRPN 261
            R ++ +M + D+R +
Sbjct: 600 IRAIEIIMEKVDLRES 615


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+I++NC CK GQ+     I
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ TF +LI  LC  +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF+EM N          P+ VTY+ +ID LC  G + KA +L   M+    
Sbjct: 404 VGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY ++I G C      EA+ +  +M  QG+  N ++ N +++ LCK+ K+D+A  
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M+   ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING C
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + AL +   +  KG++PT   YN +   LF       AL LF EM       D  
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 638 TYKIVFRGLC 647



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 192/376 (51%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L    +   VT   LI G C   R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   AL +   M     +      P+  TY+I+++ LCK G +++AK +  QM     
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ +LI   C  N   EA  L  ++  +GV P+V + N+++N LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYNTL+D  C  GK+ +  +L   MES GC     +YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI    +T+NTL  GL + ++ + A  L  +M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 533 TYNSILTHYCKQGDIK 548



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 187/379 (49%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN L+  L      +  L L +++   G+ PD+YT++ILIN  CK+G   L   +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+ +LI  LC+  ++ +A  L   +++ GC  + ITYNT+I+GLC+
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M             N +T++ +IDGLCK+  +D A  L  QM  E L
Sbjct: 474 KMRIEEAEEVFDQMDLQG------ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M    +RP    YN ++        I     LF  M  +G   D  +Y I+  G C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    ++EA     E+  KG  P   ++  L  GL  +   +   RA+++ +E   ++ +
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRES 707

Query: 362 DVAA--DTCTYRTFIDGLC 378
           DV+A       R F D L 
Sbjct: 708 DVSAIRGYLKIRKFYDALA 726



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 177/357 (49%), Gaps = 7/357 (1%)

Query: 28  DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           D V  +  +L  + G+  D   Y+ L+N   +  ++ L   ++  +      P+VVTF +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+K LC   ++  A  +  ++ + G  P+  T+ TL+ G    G    AL +   M    
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML--- 243

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E+G       VT +++I+G CK G V+ A     Q   +   P+ +TY + ++G C  +
Sbjct: 244 -EMGC--SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A  ++  MV +G  P+V + N+++N LCKNG+++ A  +L+ MV     P+  T+N
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+   C   ++    +L   +   G   D +++NILIN  CK  +   AL L+ E+   
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  P  VTYNTL   L  + +  +AL L  +M+       T TY T IDGLC + ++
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 172/401 (42%), Gaps = 11/401 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSIGLFPDLYTYSILINCFCKMG 60
           R     P   +    LL  L +    D  L +    L      P    Y  +I     +G
Sbjct: 29  RASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG 88

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKA-FGCEPNVIT 118
            + L  V+   + R      +    S +     +    +A  L   +L+  FG + + + 
Sbjct: 89  ALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVV 148

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L+N L       +  +++ EM    G  G+  KP+ VT++ ++  LC+   V  A  
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +  +M    + P+  T+T+L+ GF        A  +   M++ G     V+ NV++N  C
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G++++A   +   +     P+  TYNT ++G C    +    ++   M   G   D F
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YNI++N  CKN ++EEA  + N++  +G  P + T+NTL   L    + E AL L  ++
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 359 QGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
               V+ D  T+   I+ LC    P +         NSG T
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F +++  G+  +  T++ LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++     PN +T+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL + + M           +P    Y+ ++  L +   +  A  LF +M    
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +  G C       EA   ++EMVD+G  P   S  ++   L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 247 SRLLD-LMVQCDVR 259
            R ++ +M + D+R
Sbjct: 692 IRAIEIIMEKVDLR 705


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 188/342 (54%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   GL  D  TY+ +IN  C+  ++     +   +       + VT+T LI G C 
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCK 443

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA  +   +   G  PNV+TY  L +GLC+ G    A  L  EM+N   E+    
Sbjct: 444 RGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL---- 499

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N  TY+ +I+GLCK G++++A      M    L P+V TYT+LI   C + D + A  
Sbjct: 500 --NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+D+G++P +V+ NV+MN  C +G+++   +LLD M++ ++ PNA TYN+LM  +C
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M S     ++ +YNILI G+CK + ++EAL  ++E+  KG + T  
Sbjct: 618 IENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTAT 677

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +Y+ L   L + ++   A +LF +M+   + A++  Y  +ID
Sbjct: 678 SYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 186/382 (48%), Gaps = 9/382 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NILL  L           LF  + S    PD+ TY ILI+  C +G++     +  
Sbjct: 259 VCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLD 315

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PN   +TS++  LC +  I +A  +   +       +   Y T+++G C  G
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             + A   F EM             + VTY+ +I+GLC+   +++A++L  +M    L+ 
Sbjct: 376 DLVSARRWFDEMQRKG------LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV 429

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTYT LI G+C      EA  +   MV +GV PNVV+   + + LCK G +  A+ LL
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    +  NA TYN+L++G C  G + +       M++   K D ++Y  LI+  CK+
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +++ A SL  E+  KGIKPT+VTYN L +G     + E   KL   M   ++  +  TY
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609

Query: 371 RTFIDGLCVRPQVRFTYARRKG 392
            + +   C+   ++ T    KG
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKG 631



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 180/401 (44%), Gaps = 47/401 (11%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +SF+ LL CL           L +RL   G+ P          C   + ++ L   I   
Sbjct: 205 ASFDFLLLCLPS-------APLLRRLRQYGISPSPEA------CNAVLSRLPLDEAI--E 249

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           + +     NV ++  L+K LC   R+ +A  LF ++ +    P+V+TY  LI+G C  G 
Sbjct: 250 LFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGE 306

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVT-----------------------------YSI 162
              A+ L  EM  G  E       + V                              Y+ 
Sbjct: 307 LENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G C +G +  A+  F +M+ + L  + VTYT++I+G C A +  EA+ LL EM  + 
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           +  + V+  V+++  CK GKM  A ++ + MVQ  V PN  TY  L DG C  G +    
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           EL   M + G + +  +YN LING CK   +E+A+    ++    +KP V TY TL   L
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +    +RA  L  EM    +     TY   ++G C+  +V
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 587



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K+   D   SL + +   G+ P + TY++L+N FC  G+V  G  +
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ SL+K  C E+ +     ++  +++    PN  TYN LI G C+
Sbjct: 594 LDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCK 653

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL    EM      I   F+    +YS +I  L K+    +A+ELF  M+ E L
Sbjct: 654 ARNMKEALYFHDEM------IQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGL 707

Query: 189 NPNVVTY 195
                 Y
Sbjct: 708 TAESDVY 714


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 200/375 (53%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+G   K+   D  L + +R++   + PD+ TY+ ++   C  G++     +
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 230

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R L R C+ P+V+T+T LI+  C +S + +A  L  +++  GC+P+V+TYN LING+C
Sbjct: 231 LDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+     M +         KPN +T++II+  +C  G    A+ L   M  + 
Sbjct: 290 KEGRLDEAIKFLNNMPSYG------CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++  C+  KMD A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L++MV     P+  TYNTL+   C  GK++   E+   + S GC     +YN +I+G 
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  + E A+ L  E+  KG+KP ++TY+TL  GL    + + A+K+F +M+G  +    
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 368 CTYRTFIDGLCVRPQ 382
            TY   + GLC   Q
Sbjct: 524 VTYNAIMLGLCKAQQ 538



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   L+    ++        + + L + G  PD+ TY++LI  +CK G++     +
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+     AP+VVT+ ++++ LC   ++ EA  +  +     C P+VITY  LI   C 
Sbjct: 199 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  EM           KP+ VTY+++I+G+CKEG +D+A +    M     
Sbjct: 256 DSGVGQAMKLLDEMRKKG------CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV+T+  ++   C    W +A+ LL +M+ +G  P+VV+ N+++N LC+   +  A  
Sbjct: 310 KPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M +    PN+ +YN L+ GFC   K++R  E    M S GC  D  +YN L+   C
Sbjct: 370 VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V+ A+ + N+L  KG  P ++TYNT+  GL ++ + E A++L  EM+   +  D  
Sbjct: 430 KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489

Query: 369 TYRTFIDGL 377
           TY T + GL
Sbjct: 490 TYSTLLRGL 498



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R      +PD+ TY+ILI   C    V     +
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKL 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+VVT+  LI G+C E R+ EA      + ++GC+PNVIT+N ++  +C 
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M            P+ VT++I+I+ LC++  + +A ++  +M     
Sbjct: 326 TGRWMDAERLLSDMLRKG------CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK+D A  
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVE 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK     EL   M   G K D  +Y+ L+ G  
Sbjct: 440 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLG 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V+EA+ +++++    IKP+ VTYN +  GL + +Q  RA+     M          
Sbjct: 500 REGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEA 559

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 560 TYTILIEGI 568



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 6/198 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    + K  D  +   + + S G +PD+ TY+ L+   CK G+V  
Sbjct: 377 HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++     +P ++T+ ++I GL    +   A  L  +++  G +P++ITY+TL+ 
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+ +F +M       G+  KP+ VTY+ I+ GLCK     +A +    M 
Sbjct: 497 GLGREGKVDEAIKIFHDME------GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 550

Query: 185 YENLNPNVVTYTSLIHGF 202
            +   P   TYT LI G 
Sbjct: 551 EKGCKPTEATYTILIEGI 568



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 5/151 (3%)

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           +SN+ + +L +NG+++   + L+ M+ Q D+ P+     +L+ GFC +GK  +   +   
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +E+ G   D  +YN+LI GYCK+ E+++AL +   +    + P VVTYNT+   L +  +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + A+++       +   D  TY   I+  C
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATC 254



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 39/83 (46%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           ++F+ NI +    +N E+EE L     + ++G  P V+   +L  G     + ++A ++ 
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
             ++ +    D  TY   I G C
Sbjct: 165 EILENSGAVPDVITYNVLIGGYC 187


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 201/386 (52%), Gaps = 14/386 (3%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M  M  S   P   ++N LL  L K    + V  L + +   G  PD ++Y+ ++ C C+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+      I  +++     P+VVT+ SL+ G C  S++ EA  L   +    C P VIT
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TLI G  R      A  + ++M            P+ VTY+ ++DGLCK G +++A E
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAG------ISPDLVTYNCLLDGLCKAGKLEEAHE 358

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M  ++  P+VVTY+ L++G C     ++A+ LL  M+++G QPN+V+ N +++  C
Sbjct: 359 LLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K GK+D   ++L+LM +    P+  TY+TL+DG+C   K NR+++ F  +   G   D  
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC---KANRMQDAFAIL---GISPDKA 472

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ ++ G C   +VEEA  + + +  +G  PT   Y  +  GL ++ + + ALK+   M
Sbjct: 473 SYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVM 532

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR 384
                  +  TY   I+GLC   +V 
Sbjct: 533 SERGCEPNLYTYSILINGLCKTKRVE 558



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 193/380 (50%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+  L + +  D    L   +      PD   Y+ LI   CKMG++     +
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+V+T+TSLI G C  + + EA  L  K+K  G  P+ + YN L+NGLC+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    L +EM     E      P+T +Y+ ++  LC+ G  ++A ++  +M  +  
Sbjct: 210 QNQLEEVSKLLEEMVEAGRE------PDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SL+ GFC  +  +EA+ LL +MV +   P V++   ++    +  ++ +A R
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++ M +  + P+  TYN L+DG C  GK+    EL   M    C  D  +Y+IL+NG C
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V++A  L   +  +G +P +VT+NT+  G  +  + +   K+   M+      D  
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY T IDG C   +++  +A
Sbjct: 444 TYSTLIDGYCKANRMQDAFA 463



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 192/378 (50%), Gaps = 10/378 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   PS P  S++  L+   ++  +   VL +   + +    PD+ T++ ++  +C++G 
Sbjct: 15  RFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGD 74

Query: 62  VSLGFVIF-GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +      F G++  S   P   T+  LI GLC   RI EA  L  ++    C P+   YN
Sbjct: 75  LDRALSHFRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYN 131

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI GLC+ G    A N+ K M   +        P+ +TY+ +I G C+   +D+A++L 
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERS------CVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +MK   L P+ V Y +L++G C  N   E   LL EMV+ G +P+  S N ++  LC++
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK + A ++L+ M++    P+  TYN+LMDGFC   K++  + L   M    C     +Y
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI G+ +   + +A  +  ++   GI P +VTYN L  GL +  + E A +L   M  
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 361 NDVAADTCTYRTFIDGLC 378
            D A D  TY   ++GLC
Sbjct: 366 KDCAPDVVTYSILVNGLC 383



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 180/334 (53%), Gaps = 12/334 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L K    +    L + +      PD+ TYSIL+N  CK+G+V    ++
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN+VTF ++I G C   ++ E   +   +K   C P+V+TY+TLI+G C+
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                        M +    +G+   P+  +YS +++GLC  G V++A+E+   M  +  
Sbjct: 455 ANR----------MQDAFAILGI--SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC 502

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P    Y  +I G C     +EA  +L  M ++G +PN+ + ++++N LCK  ++++A  
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD+M++    P+  TY +L+DGFC   K++   + F +M   GC+ D  +YNILI+G+C
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++  VE+A+ +   +  KG  P   TY +L   L
Sbjct: 623 QSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 39/347 (11%)

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT--- 121
           G+  F         P+  T+ +LI G            +  ++ A    P+VIT+NT   
Sbjct: 8   GYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILK 67

Query: 122 ------------------------------LINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
                                         LI+GLC+      A  L  EM   +     
Sbjct: 68  AYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD----- 122

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+   Y+ +I GLCK G +D A+ +   M   +  P+V+TYTSLI G C  N  +EA
Sbjct: 123 -CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + L+ +M + G+ P+ V+ N ++N LCK  +++  S+LL+ MV+    P+ F+YNT++  
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C +GK     ++   M    C  D  +YN L++G+CK  +++EA  L  ++  +   PT
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           V+TY TL  G     +   A ++  +M    ++ D  TY   +DGLC
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 8/283 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R +E  + F +  +   +P+  TY  LI G  R G++ + L +  EM      +   F P
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEM------LARRFSP 57

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + +T++ I+   C+ G +D+A   F    +   +P   TY  LIHG C     +EA  LL
Sbjct: 58  DVITHNTILKAYCQIGDLDRALSHFRGKMW--CSPTAFTYCILIHGLCQCQRIDEAYQLL 115

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM+ +   P+    N ++  LCK GK+D A  +L +M++    P+  TY +L+ G C T
Sbjct: 116 DEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
             ++  ++L   M+  G   D  +YN L+NG CK  ++EE   L  E+   G +P   +Y
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           NT+   L E  + E A K+  +M       D  TY + +DG C
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFC 278



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP  S + +++G L   +  D  L + + ++  G  P+LYTYSILIN  CK  +V     
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L     P+V T+TSLI G C  +++  A   F  ++  GCEP+ + YN LI+G C
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           ++G+   A+ + + M     E G    P+  TY  ++  L  E
Sbjct: 623 QSGNVEKAIEVMQLML----EKGC--NPDAATYFSLMRSLTTE 659


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 203/400 (50%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +++ ++  L K +  D   +  +++ + G+ P+ +TY+ LI  +   GQ      
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVTF  L+  LC   +I EA  +F  +   G  P+V +YN ++NG  
Sbjct: 311 VFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV------------------------------FKPNT 157
             G  +   +LF  M  G+G   V+                               KPN 
Sbjct: 371 TKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV 429

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           +TY+ +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 430 LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G+  ++V  + I+N LCK G++ +A  + DL V   + P A  Y+ LMDG+CL GK
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +D  Y  L+NGYCK   ++E LSL+ E+  KGIKP+ + YN 
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 609

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLFE  +   A   F EM  + +A + CTY   + GL
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 649



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 183/355 (51%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    +++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             L+KG C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  P+ V Y+ +IDG  KEG V+KA +LF +M    + P+ VTY+S++H  C
Sbjct: 210 EG----GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++GV PN  + N ++      G+   A R+   M +  + P+  
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 325

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T+N LM   C  GKI   +++F +M   G   D FSYNI++NGY     + +   L++ +
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P + T+N L          ++A+ +F EM+ + V  +  TY T I  LC
Sbjct: 386 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALC 440



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+L+G L K         +F  +   G  PD+++Y+I++N +   G +     +
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 381

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    AP + TF  LIK       + +A  +F +++  G +PNV+TY T+I  LCR
Sbjct: 382 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+  F +M +     GV   P+   Y  +I G C  G + KAKEL  ++    +
Sbjct: 442 IGKMDDAMEKFNQMIDQ----GVA--PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + ++V ++S+I+  C      +A+ +    V+ G+ P  V  +++M+  C  GKM+ A R
Sbjct: 496 HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV   + PN   Y TL++G+C  G+I+    LF  M   G K     YNI+I+G  
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +      A   ++E+   GI     TY+ +  GLF+ R  + A+ LF E++  +V  D  
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675

Query: 369 TYRTFIDGL 377
           T  T I G+
Sbjct: 676 TLNTMIAGM 684



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 178/374 (47%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+NI+L   A       +  LF  +   G+ P + T+++LI  +   G + 
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLD 411

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      PNV+T+T++I  LC   ++ +A   F ++   G  P+   Y+ LI
Sbjct: 412 KAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +V       +S II+ LCK G V  A+ +F   
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVL------FSSIINNLCKLGRVMDAQNIFDLT 525

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P  V Y+ L+ G+C      +A  +   MV  G++PN V    ++N  CK G++
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   YN ++DG    G+    K  F  M   G   +  +Y+I+
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 364 AADTCTYRTFIDGL 377
                TY   I  L
Sbjct: 706 VPCVVTYSIMITNL 719



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 50/418 (11%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S++ILL  L    K+   D +L +     ++   PD+  Y+ +I+ 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPDVVAYNTVIDG 228

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P+ VT++S++  LC    + +A A   ++   G  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT+++++  LCK G + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPDVVTFNMLMGSLCKYGKIKE 342

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +Y  +++G+                                 
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 402

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+PNV++   ++  LC+ GKMD+A    + M+   V P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + + Y+ L+ GFC  G + + KEL   + + G   D   ++ +IN  CK   V +A +++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +     G+ PT V Y+ L  G   + + E+AL++F  M    +  +   Y T ++G C
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN+L+   A     D  + +F  +   G+ P++ TY+ +I   C++G++      
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    AP+   +  LI+G C    +++A  L +++   G   +++ ++++IN LC+
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F    N      V   P  V YS+++DG C  G ++KA  +F  M    +
Sbjct: 512 LGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V Y +L++G+C     +E   L  EM+ +G++P+ +  N+I++ L + G+   A  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  N  TY+ ++ G       +    LF  + +M  K D  + N +I G  
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + + VEEA  L+  +   G+ P VVTY+ +   L +    E A  +F  MQ      D+
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 174/390 (44%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y  LI  FC  G +  
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F+S+I  LC   R+++A  +F      G  P  + Y+ L++
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIGRIDEGLSLFREML 596

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+ + Y  +I G   A     AK    EM + G+  N  + ++++  L KN   D
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ +  T NT++ G   T ++   K+LF S+   G      +Y+I+I
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R  +RF  A+
Sbjct: 777 LEHLTTMLLVDLFSSKGTC-REHIRFLPAK 805



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++      + ++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            +      ++ G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 150 NH------LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+ N +++   K G ++ A  L   MVQ  + P+  TY++++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M + G   ++++YN LI GY    + +EA+ ++ E+  + I P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT+N L   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 199/370 (53%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++   A++ + +    +++ +   G  PD  +Y ILI+   K+G++     I
Sbjct: 43  PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKI 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P++  ++SL++ L    R+  A++LF ++   G  P+ + +  LI GLC+
Sbjct: 103 LSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   FK+M           +PN   Y++++ GLC  G +++A  LF +MK  + 
Sbjct: 163 AGKVKDASERFKQMPKHG------CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSC 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY +L+   C A    E   L   M   G  PNV++ + +++ LC+ G+++ A  
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M++   +PN +TY TL+ G C   K+ + +ELF  M       D  +YN LI GYC
Sbjct: 277 VFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 336

Query: 309 KNKEVEEALSLYNELP-FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K   ++EA  LY E+    G++PT+VT+NTL  G  ++ +  RA +L  EM    +AAD+
Sbjct: 337 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS 396

Query: 368 CTYRTFIDGL 377
           CTYR  I GL
Sbjct: 397 CTYRILIAGL 406



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 198/390 (50%), Gaps = 9/390 (2%)

Query: 2   RHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           +HM  S   P   S++IL+  LAK    D  L +   +   G  P +  YS L+    K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
            +V     +F  ++R    P+ + F  LI GLC   ++ +A+  F ++   GC+PNV  Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N L++GLC +G    A  LF EM + +        P+ VTY+ ++D +CK   V++  +L
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHS------CSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F  M+     PNV+T+++LIHG C   +  +A  +   M++ G +PN  +   +++ LC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-SMGCKHDDF 298
             K+  A  L + M Q  + P+A  YN+L+ G+C  G ++  ++L+  M    G +    
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++N LI+G+CK  ++  A  L  E+  KG+     TY  L  GL    + + AL+++ +M
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           +      D  +  +F+ GLC    +   YA
Sbjct: 423 REKKFLLDPVSCVSFVGGLCKTGNIDQAYA 452



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 187/375 (49%), Gaps = 7/375 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P + +++ L+  LAK +  D   SLF  +   G  PD   +  LI   C+ G+V 
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVK 167

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
                F ++ +    PNV  +  L+ GLC+  ++ +A  LF ++K+  C P+V+TYNTL+
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           + +C+         LF+ M          + PN +T+S +I GLC+ G ++KA E+F  M
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAG------YVPNVITFSTLIHGLCRTGELEKALEVFGSM 281

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 PN  TYT+LI G C A    +A+ L  +M    + P+ V+ N ++   CK G M
Sbjct: 282 LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 341

Query: 244 DNASRLLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           D A +L   M     ++P   T+NTL+DGFC  GK+ R  EL   M + G   D  +Y I
Sbjct: 342 DEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRI 401

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI G  +  +++EAL +Y ++  K      V+  +   GL +    ++A  +F   + + 
Sbjct: 402 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 461

Query: 363 VAADTCTYRTFIDGL 377
              +  T+R   + L
Sbjct: 462 AVPNPETFRILSESL 476



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 8/360 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  +  + ++LG     K  D     FK++   G  P++  Y++L++  C  GQ+     
Sbjct: 148 PDRLMFYELILGLCQAGKVKDAS-ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +     +P+VVT+ +L+  +C   R+ E   LF  ++A G  PNVIT++TLI+GLC
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           RTG    AL +F  M     E G   KPN  TY+ +I GLC+   V +A+ELF +M    
Sbjct: 267 RTGELEKALEVFGSML----EAGC--KPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNA 246
           + P+ V Y SLI G+C     +EA+ L  EM    G+QP +V+ N +++  CK GK+  A
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           + L+  M    +  ++ TY  L+ G     K++   E++  M       D  S    + G
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGG 440

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +++A +++      G  P   T+  L   L ++ + E A KL    +  D+ A 
Sbjct: 441 LCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 159/307 (51%), Gaps = 6/307 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            A NV T++S+IK L  E++  E+  +  ++ A GC P+V  +N ++ G  R+ +   A 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +++ M          +KP+ V+Y I+I GL K G +D++ ++  +M      P++  Y+
Sbjct: 66  EVYQHMVESG------YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SL+     A   + A  L  EM+  G  P+ +    ++  LC+ GK+ +AS     M + 
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +PN   YN L+ G C +G++ +   LF  M+S  C  D  +YN L++  CK + VEE 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L+  +   G  P V+T++TL HGL    + E+AL++F  M       +  TY T I G
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 377 LCVRPQV 383
           LC   +V
Sbjct: 300 LCRAEKV 306



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 7/316 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V  +N+LL  L  +   +   +LF  + S    PD+ TY+ L++  CK  +V  
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G  +F  +  + + PNV+TF++LI GLC    + +A  +F  +   GC+PN  TY TLI+
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLCR    I A  LF++MT           P+ V Y+ +I G CK G +D+A++L+ +M 
Sbjct: 299 GLCRAEKVIQARELFEKMTQA------CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352

Query: 185 -YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L P +VT+ +LI GFC       A  L+ EM  +G+  +  +  +++  L +  K+
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  +   M +     +  +  + + G C TG I++   +F +    G   +  ++ IL
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472

Query: 304 INGYCKNKEVEEALSL 319
                K   VE+A  L
Sbjct: 473 SESLIKLGRVEDAQKL 488



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 35/231 (15%)

Query: 183 MKYENLNPNVVTYTSLI-----------------------------------HGFCHAND 207
           M+ +N+  NV TY+S+I                                    GF  +N+
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             +A+ +   MV+ G +P+ VS +++++ L K GK+D + ++L  MV     P+   Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+       +++    LF  M   G   D   +  LI G C+  +V++A   + ++P  G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +P V  YN L HGL    Q E+A  LF EM+ +  + D  TY T +D +C
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVC 231



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M D+ +  NV + + I+  L K  K + + ++L+ M+     P+ F +N +M GF  +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + + +E++  M   G K D+ SY+ILI+G  K  +++E+L + +E+  +G  P++  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           L   L + R+ + A  LF EM       D   +   I GLC   +V+    R K
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 202/358 (56%), Gaps = 7/358 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H   SP  +S F+ L+G  ++N H D  L  F+ + + GL PD   Y+ILIN +C+ G
Sbjct: 316 MLHRGVSPDLIS-FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +S    I  ++L    A +VV + +++ GLC +  + +A ALF ++   G  P+  T+ 
Sbjct: 375 MMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFT 434

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G C+ G+   AL+LF  MT  N       KP+ VTY+I+IDG CK   ++KA EL+
Sbjct: 435 TLIHGHCKEGNMGKALSLFGIMTQKN------IKPDIVTYNILIDGFCKTTEMEKANELW 488

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    + PN ++Y  L++G+C+    +EA  L  EM+ +G++P +V+ N ++   C++
Sbjct: 489 NEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRS 548

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A   L  M+   V P++ TYNTL++GF     +++   L   ME+ G + D  +Y
Sbjct: 549 GDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTY 608

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           N+++NG+C+   ++EA  +  ++  +GI P   TY TL +G       + A +   EM
Sbjct: 609 NVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 195/368 (52%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N LL    +N ++     +F  +   G+ PDL ++S LI    + G +    + 
Sbjct: 288 PDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ V +T LI G C    + EA  +  K+   GC  +V+ YNT++NGLC+
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EM     E GVV  P+  T++ +I G CKEG + KA  LF  M  +N+
Sbjct: 408 KKLLADANALFDEMV----ERGVV--PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY  LI GFC   +  +A  L  EM+ + + PN +S  +++N  C  G +  A R
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M++  ++P   T NT++ G+C +G +++  E    M S G   D  +YN LING+ 
Sbjct: 522 LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +++A  L N++  KG++P VVTYN + +G     + + A  +  +M    +  D  
Sbjct: 582 KGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRS 641

Query: 369 TYRTFIDG 376
           TY T I+G
Sbjct: 642 TYTTLING 649



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 192/368 (52%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L K+   D V      +   G+F D+ TY+ LIN +C+ G +   F +  
Sbjct: 185 VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMN 244

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P + T+ ++I GLC + R V A  +F ++ + G  P+  TYNTL+   CR  
Sbjct: 245 SMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNN 304

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           + + A ++F +M +     GV   P+ +++S +I    + G +D+A   F  MK   L P
Sbjct: 305 NFLEAKDIFSDMLHR----GV--SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + V YT LI+G+C     +EA  +  +M++QG   +VV+ N I+N LCK   + +A+ L 
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D MV+  V P+  T+ TL+ G C  G + +   LF  M     K D  +YNILI+G+CK 
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            E+E+A  L+NE+  + I P  ++Y  L +G   +     A +L+ EM    +     T 
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTC 538

Query: 371 RTFIDGLC 378
            T I G C
Sbjct: 539 NTVIKGYC 546



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + +  +     FK L   G    +   + L+    KMG V L + ++  I 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RS    NV T   ++  LC + +I +       ++  G   +++TYNTLIN  CR G   
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +   M+ G G      KP   TY+ +I+GLCK+G   +AK +F +M    L+P+  
Sbjct: 238 EAFEVMNSMS-GKG-----LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L+   C  N++ EAK +  +M+ +GV P+++S + ++    +NG +D A      M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+   Y  L++G+C  G ++   E+   M   GC  D  +YN ++NG CK K +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A +L++E+  +G+ P   T+ TL HG  +     +AL LF  M   ++  D  TY   
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 374 IDGLC 378
           IDG C
Sbjct: 472 IDGFC 476



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 198/436 (45%), Gaps = 76/436 (17%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSIL------------------ 52
           +++ N LLG L K    D    ++  +   G+  ++YT +I+                  
Sbjct: 150 INACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLI 209

Query: 53  -----------------INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
                            IN +C+ G +   F +   +      P + T+ ++I GLC + 
Sbjct: 210 DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKG 269

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R V A  +F ++ + G  P+  TYNTL+   CR  + + A ++F +M +     GV   P
Sbjct: 270 RYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR----GV--SP 323

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + +++S +I    + G +D+A   F  MK   L P+ V YT LI+G+C     +EA  + 
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIR 383

Query: 216 IEMVDQGVQPNVVSSNVIMNEL-----------------------------------CKN 240
            +M++QG   +VV+ N I+N L                                   CK 
Sbjct: 384 DKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKE 443

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G M  A  L  +M Q +++P+  TYN L+DGFC T ++ +  EL+  M S     +  SY
Sbjct: 444 GNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISY 503

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            IL+NGYC    V EA  L++E+  KGIKPT+VT NT+  G        +A +   +M  
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMIS 563

Query: 361 NDVAADTCTYRTFIDG 376
             V  D+ TY T I+G
Sbjct: 564 EGVGPDSITYNTLING 579



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + +  LI  +  A   NE       +  +G   ++ + N ++  L K G +D A  + + 
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  +  N +T N +++  C   KI+ VK   + ME  G   D  +YN LIN YC+   
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + EA  + N +  KG+KPT+ TYN + +GL +  +  RA  +F EM    ++ DT TY T
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 373 FIDGLC 378
            +   C
Sbjct: 296 LLVESC 301



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 56/107 (52%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K ++ D    L  ++ + GL PD+ TY++++N FC+ G++    +I
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
             +++     P+  T+T+LI G  ++  + EA     ++   G  P+
Sbjct: 628 LRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 278 INRVK--ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           ++RV+  E  +SM S  C  D+  +++LI  Y + +++ E    +  L  KG   ++   
Sbjct: 95  VSRVEIVESLISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC 153

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N+L  GL ++   + A +++ E+  + +  +  T    ++ LC
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALC 196


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K       +   +R+ + G  PD +TY+ +I+ +CK+  V     +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+ VT+ SLI GLCAE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM     E G    P+  TY+I+I+GLCK G +  A  +      +  
Sbjct: 374 QGLILHALQVMNEM----AEEGC--HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C     + A  L+  M + G+ P+ ++ N ++N LCK GK++  + 
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 487

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+     PN  TYN L++ FC + K+    ++ V M   G   D  S+N LI G+C
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL---FHGLFEIRQAERALKLFVEMQGNDVAA 365
           +N ++E A  L+ +L  KG   T  T+NTL   F G   +  AE   K+F EM      A
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 604

Query: 366 DTCTYRTFIDGLCVRPQVRFTY 387
           D+ TYR  IDG C    V   Y
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAY 626



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 195/373 (52%), Gaps = 13/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN +L  L K         L  ++   G+  +L+TY+I I   C+ G++     +
Sbjct: 185 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 244

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +R+   P+VVT+ +LI+GLC +S   EA     ++   GC P+  TYNT+I+G C+
Sbjct: 245 VDG-MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
                 A  L K+          VFK   P+ VTY  +I+GLC EG V++A ELF + + 
Sbjct: 304 ISMVQEATELLKD---------AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 354

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P++V Y SL+ G C       A  ++ EM ++G  P++ + N+++N LCK G + +
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +++  +     P+ FT+NTL+DG+C   K++   +L   M   G   D  +YN ++N
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK  +V E    + E+  KG  P  +TYN L        + E A K+ V+M    +  
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 534

Query: 366 DTCTYRTFIDGLC 378
           D  ++ T I G C
Sbjct: 535 DAVSFNTLIYGFC 547



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 58/374 (15%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQVSLG 65
           GCL  +  Y+T++  + +++ +             G  PD  TY  LIN  C  G V   
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F         P++V + SL+KGLC +  I+ A  +  ++   GC P++ TYN +ING
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 126 LCRTGH----TIV-------------------------------ALNLFKEMTNGNGEIG 150
           LC+ G+    T+V                               AL L + M     E G
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM----WEYG 461

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           +   P+T+TY+ +++GLCK G V++  E F +M  +  +PN +TY  LI  FC +N   E
Sbjct: 462 IA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  ++++M  +G+ P+ VS N ++   C+NG ++ A  L   + +      A T+NTL+ 
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 579

Query: 271 GFCLTGKIN--RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            F  +GK+N    +++F  M S G + D ++Y +LI+G CK   V+ A     E+  KG 
Sbjct: 580 AF--SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 637

Query: 329 KPTVVTYNTLFHGL 342
            P++ T+  + + L
Sbjct: 638 IPSMSTFGRVINSL 651



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 14/345 (4%)

Query: 36  RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
           RL+   + P LY  SI    + + G++      F R+      P    + +++  L   +
Sbjct: 44  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 100

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
              +A  ++ ++ A G  P++ T+   +   C T    +AL L + + +           
Sbjct: 101 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA-------- 152

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
             V Y  ++ GL   G    A++LF QM + ++ PN+  +  ++H  C   D  EA  LL
Sbjct: 153 --VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL 210

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +++ +G+  N+ + N+ +  LC+ G++  A RL+D M    V P+  TYNTL+ G C  
Sbjct: 211 GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKK 269

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
                       M + GC  DDF+YN +I+GYCK   V+EA  L  +  FKG  P  VTY
Sbjct: 270 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 329

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +L +GL      ERAL+LF E Q   +  D   Y + + GLC++
Sbjct: 330 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 374



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 6/325 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L         L +   +   G  PD+ TY+I+IN  CKMG +S   V+
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF +LI G C   ++  A  L  ++  +G  P+ ITYN+++NGLC+
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        F+EM      I     PN +TY+I+I+  C+   +++A ++ ++M  E L
Sbjct: 479 AGKVNEVNETFQEM------ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ V++ +LI+GFC   D   A  L  ++ ++G      + N ++        M  A +
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+    R +++TY  L+DG C T  ++R     V M   G      ++  +IN   
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
            N  V +A+ + + +   G+ P VV
Sbjct: 653 VNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 45/322 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D+ L L +R+   G+ PD  TY+ ++N  CK G+V+     
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488

Query: 69  FGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F   IL+ C  PN +T+  LI+  C  +++ EA+ +  K+   G  P+ +++NTLI G C
Sbjct: 489 FQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547

Query: 128 RTGHTIVALNLFKEMTNG---------NGEIGVV--------------------FKPNTV 158
           R G    A  LF+++            N  IG                       + ++ 
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 607

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY ++IDG CK   VD+A    ++M  +   P++ T+  +I+     +   +A G++  M
Sbjct: 608 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 667

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLL--DLMVQCDVRPNAFTYNTLMDG----- 271
           V  GV P VV  + I+N    + K   A ++L  DLM +  +  +  TY  L +G     
Sbjct: 668 VKIGVVPEVV--DTILN---ADKKEIAAPKILVEDLMKKGHI--SYPTYEVLHEGVQSTI 720

Query: 272 FCLTGKINRVKELFVSMESMGC 293
           +CL     R  +      + GC
Sbjct: 721 YCLEYGKQRASDPKCRKTTEGC 742



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 7/161 (4%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P  V+S   +    + G++ +A    + M      P A  YN +MD        ++  
Sbjct: 50  IHPLYVAS---IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 106

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +++V M + G   D  ++ I +  +C       AL L   LP +G     V Y T+  GL
Sbjct: 107 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGL 162

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +       A +LF +M    V  +   +   +  LC R  V
Sbjct: 163 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K       +   +R+ + G  PD +TY+ +I+ +CK+  V     +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+ VT+ SLI GLCAE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM     E G    P+  TY+I+I+GLCK G +  A  +      +  
Sbjct: 373 QGLILHALQVMNEM----AEEGC--HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C     + A  L+  M + G+ P+ ++ N ++N LCK GK++  + 
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 486

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+     PN  TYN L++ FC + K+    ++ V M   G   D  S+N LI G+C
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL---FHGLFEIRQAERALKLFVEMQGNDVAA 365
           +N ++E A  L+ +L  KG   T  T+NTL   F G   +  AE   K+F EM      A
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 603

Query: 366 DTCTYRTFIDGLCVRPQVRFTY 387
           D+ TYR  IDG C    V   Y
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAY 625



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 14/381 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H H  P  +++FN +L  L K         L  ++   G+  +L+TY+I I   C+ G
Sbjct: 177 MLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +    +R+   P+VVT+ +LI+GLC +S   EA     ++   GC P+  TYN
Sbjct: 236 RLPEAVRLVDG-MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAK 177
           T+I+G C+      A  L K+          VFK   P+ VTY  +I+GLC EG V++A 
Sbjct: 295 TIIDGYCKISMVQEATELLKD---------AVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF + + + + P++V Y SL+ G C       A  ++ EM ++G  P++ + N+++N L
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G + +A+ +++  +     P+ FT+NTL+DG+C   K++   +L   M   G   D 
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 465

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YN ++NG CK  +V E    + E+  KG  P  +TYN L        + E A K+ V+
Sbjct: 466 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 525

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M    +  D  ++ T I G C
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFC 546



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 58/374 (15%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQVSLG 65
           GCL  +  Y+T++  + +++ +             G  PD  TY  LIN  C  G V   
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F         P++V + SL+KGLC +  I+ A  +  ++   GC P++ TYN +ING
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 126 LCRTGH----TIV-------------------------------ALNLFKEMTNGNGEIG 150
           LC+ G+    T+V                               AL L + M     E G
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM----WEYG 460

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           +   P+T+TY+ +++GLCK G V++  E F +M  +  +PN +TY  LI  FC +N   E
Sbjct: 461 IA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  ++++M  +G+ P+ VS N ++   C+NG ++ A  L   + +      A T+NTL+ 
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578

Query: 271 GFCLTGKIN--RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            F  +GK+N    +++F  M S G + D ++Y +LI+G CK   V+ A     E+  KG 
Sbjct: 579 AF--SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 636

Query: 329 KPTVVTYNTLFHGL 342
            P++ T+  + + L
Sbjct: 637 IPSMSTFGRVINSL 650



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 14/345 (4%)

Query: 36  RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
           RL+   + P LY  SI    + + G++      F R+      P    + +++  L   +
Sbjct: 43  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 99

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
              +A  ++ ++ A G  P++ T+   +   C T    +AL L + + +           
Sbjct: 100 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA-------- 151

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
             V Y  ++ GL   G    A++LF QM + ++ PN+  +  ++H  C   D  EA  LL
Sbjct: 152 --VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL 209

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +++ +G+  N+ + N+ +  LC+ G++  A RL+D M    V P+  TYNTL+ G C  
Sbjct: 210 GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKK 268

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
                       M + GC  DDF+YN +I+GYCK   V+EA  L  +  FKG  P  VTY
Sbjct: 269 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 328

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +L +GL      ERAL+LF E Q   +  D   Y + + GLC++
Sbjct: 329 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 6/325 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L         L +   +   G  PD+ TY+I+IN  CKMG +S   V+
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF +LI G C   ++  A  L  ++  +G  P+ ITYN+++NGLC+
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        F+EM      I     PN +TY+I+I+  C+   +++A ++ ++M  E L
Sbjct: 478 AGKVNEVNETFQEM------ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ V++ +LI+GFC   D   A  L  ++ ++G      + N ++        M  A +
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+    R +++TY  L+DG C T  ++R     V M   G      ++  +IN   
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
            N  V +A+ + + +   G+ P VV
Sbjct: 652 VNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 45/322 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D+ L L +R+   G+ PD  TY+ ++N  CK G+V+     
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487

Query: 69  FGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F   IL+ C  PN +T+  LI+  C  +++ EA+ +  K+   G  P+ +++NTLI G C
Sbjct: 488 FQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546

Query: 128 RTGHTIVALNLFKEMTNG---------NGEIGVV--------------------FKPNTV 158
           R G    A  LF+++            N  IG                       + ++ 
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 606

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY ++IDG CK   VD+A    ++M  +   P++ T+  +I+     +   +A G++  M
Sbjct: 607 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 666

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLL--DLMVQCDVRPNAFTYNTLMDG----- 271
           V  GV P VV  + I+N    + K   A ++L  DLM +  +  +  TY  L +G     
Sbjct: 667 VKIGVVPEVV--DTILN---ADKKEIAAPKILVEDLMKKGHI--SYPTYEVLHEGVQSTI 719

Query: 272 FCLTGKINRVKELFVSMESMGC 293
           +CL     R  +      + GC
Sbjct: 720 YCLEYGKQRASDPKCRKTTEGC 741



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 7/161 (4%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P  V+S   +    + G++ +A    + M      P A  YN +MD        ++  
Sbjct: 49  IHPLYVAS---IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 105

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +++V M + G   D  ++ I +  +C       AL L   LP +G     V Y T+  GL
Sbjct: 106 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGL 161

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +       A +LF +M    V  +   +   +  LC R  V
Sbjct: 162 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 196/382 (51%), Gaps = 15/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN ++  L K   ++   SL   +      P   TY+ LI+  CK   V     +
Sbjct: 43  PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTL 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               + S F P+VVT++ L  GLC   RI EA  L  ++   GC PN++TYNTLI+GLC+
Sbjct: 103 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  A  L + + +        F P+ VTY+II+DGLCKEG +DKA ++   M     
Sbjct: 163 ASKTEKAYELLETLVSSG------FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT+L+ G C     +EA  +  EMV +    + ++   ++N  CK+ +   A +
Sbjct: 217 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276

Query: 249 LLDLMVQCDVR--PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           ++D      +R  P    YN LMDG+C  G+++ +  +F  M   GC  +  +YNI+++G
Sbjct: 277 VVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 331

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK+ +V+EA      +   G  P VV+YN +  GLF+  + + A ++  +M    +  D
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391

Query: 367 TCTYRTFIDGLCVRPQVRFTYA 388
             TY T +   C   + RF  A
Sbjct: 392 AVTYNTLMAQFC--KEERFDDA 411



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 13/349 (3%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +N   + PD++TY+ILI+  CK  +      +   ++     P+ VTF S++ GLC   +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
              A +L   +    C P+  TYNTLI+GLC+  +   A  L  E  +        F P+
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSG------FVPD 114

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTYSI+ DGLCK G +D+A EL  +M      PN+VTY +LI G C A+   +A  LL 
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            +V  G  P+VV+  +I++ LCK G++D A ++++ M++    P+  TY  LM+G C TG
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK--PTVVT 334
           +++    +F  M S  C  D  +Y  L+NGYCK+   +EA  + +     GI+  P +  
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDV 289

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           YN L  G  +  + +    +F +M       +  TY   +DGLC   +V
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 195/397 (49%), Gaps = 27/397 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL   L K    D    L K ++  G  P+L TY+ LI+  CK  +    + +
Sbjct: 113 PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S F P+VVT+T ++ GLC E R+ +A  +   +   GC P+VITY  L+ GLCR
Sbjct: 173 LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 232

Query: 129 TGHTIVALNLFKEMTNGNGEI--------------------------GVVFKPNTVTYSI 162
           TG    A ++FKEM + +                             G+   P    Y+ 
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNA 292

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++DG CKEG +D+   +F  M      PN+ TY  ++ G C     +EA   L  M   G
Sbjct: 293 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P+VVS N+I++ L K  K   A ++LD M+Q  + P+A TYNTLM  FC   + +   
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHG 341
            +  +M   G   D+ +YN LI+G  +   + +A  L +E+   G +     TYNT+   
Sbjct: 413 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 472

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L +    ++AL L   M G+ V A+T TY  FID LC
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 192/371 (51%), Gaps = 13/371 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K ++ D   +L     S G  PD+ TYSIL +  CK G++   F +
Sbjct: 78  PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN+VT+ +LI GLC  S+  +A  L   L + G  P+V+TY  +++GLC+
Sbjct: 138 VKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCK 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL + + M            P+ +TY+ +++GLC+ G VD+A  +F +M  ++ 
Sbjct: 198 EGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ--PNVVSSNVIMNELCKNGKMDNA 246
             + + Y SL++G+C ++   EA+ ++      G++  P +   N +M+  CK G++D  
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + + M      PN  TYN +MDG C  GK++       SM S GC  D  SYNI+I+G
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K  + +EA  + +++   GI P  VTYNTL     +  + + A+ +   M    V  D
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 367 TCTYRTFIDGL 377
             TY T I GL
Sbjct: 427 NVTYNTLISGL 437



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 217/500 (43%), Gaps = 130/500 (26%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K    +    L + L S G  PD+ TY+I+++  CK G++     +
Sbjct: 148 PNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+    P+V+T+T+L++GLC   R+ EA  +F ++ +  C  + + Y +L+NG C+
Sbjct: 208 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 267

Query: 129 TGHTIVA------------LNLFKEMTNGN------GEIGVVFK--------PNTVTYSI 162
           +  T  A            ++++  + +G        EI  VF+        PN  TY+I
Sbjct: 268 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327

Query: 163 IIDGLCKEGFVDKA-----------------------------------KELFLQMKYEN 187
           ++DGLCK G VD+A                                   +++  QM    
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN--------------------- 226
           + P+ VTY +L+  FC    +++A G+L  M+  GV P+                     
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447

Query: 227 -----------VVSS----NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                      VVS+    N I++ LCK G +  A  L+D M    V  N  TYN  +D 
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507

Query: 272 FCLTGKINRVKELFVSMESMG------------CKHDDF--------------------- 298
            C  G+++    L   M+++             CK +                       
Sbjct: 508 LCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++N+LI+ + K K ++EAL+L   +  +G  P+V+TYN +   L ++ + ++A +LF EM
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               + A + +Y   I GLC
Sbjct: 628 AVRGIVASSVSYTVLIYGLC 647



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 185/377 (49%), Gaps = 11/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++  L K+   D      + ++S G  PD+ +Y+I+I+   K  +      +
Sbjct: 320 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 379

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++++   P+ VT+ +L+   C E R  +A  +   +   G +P+ +TYNTLI+GL +
Sbjct: 380 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 439

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A  L  EM       G V    T TY+ IID LCKEG + +A  L   M    +
Sbjct: 440 TNRLGDAYELMHEMLRN----GCVVSACT-TYNTIIDRLCKEGCLKQALLLMDHMTGHGV 494

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTY   I   C     +EA  LL EM    ++  V  + VI+  LCK  ++D AS+
Sbjct: 495 EANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVSYTTVIIG-LCKAEQLDRASK 551

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           L   MV    +   + T+N L+D F  T +++    L   M   GC     +YN++I   
Sbjct: 552 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCL 611

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V++A  L++E+  +GI  + V+Y  L +GL    + + AL++  EM  +D   D 
Sbjct: 612 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 671

Query: 368 CTYRTFIDGLCVRPQVR 384
              R     L +R Q R
Sbjct: 672 LKCRKLY--LALRGQGR 686



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 164/365 (44%), Gaps = 48/365 (13%)

Query: 1   MRHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +  MH +   P V S+NI++  L K         +  ++   G+ PD  TY+ L+  FCK
Sbjct: 345 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 404

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV-I 117
             +      I   ++++   P+ VT+ +LI GL   +R+ +A  L  ++   GC  +   
Sbjct: 405 EERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 464

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYNT+I+ LC+ G    AL L   MT G+G      + NTVTY+I ID LCKEG +D+A 
Sbjct: 465 TYNTIIDRLCKEGCLKQALLLMDHMT-GHG-----VEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA----------KGLLIE---------- 217
            L  +M   +   + V+YT++I G C A   + A          KGL I           
Sbjct: 519 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 218 ----------------MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
                           MV +G  P+V++ N+++  LCK  K+D A  L D M    +  +
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 635

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + +Y  L+ G C  G+     ++   M S  C+ DD     L          EEA  L  
Sbjct: 636 SVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLR 695

Query: 322 ELPFK 326
            +  K
Sbjct: 696 RMTTK 700



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 91/170 (53%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M ++ V P+V + N++++ LCK  K D AS +L  MV   V P+  T+N++MDG C  GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
             R   L   M    C+    +YN LI+G CK + V+ A +L +E    G  P VVTY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           L  GL +  + + A +L  EM GN    +  TY T IDGLC   +    Y
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY 170



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 69/139 (49%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ FTYN L+DG C   K ++  E+   M   G   D  ++N +++G CK  + E A 
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           SL   +  +  +P+  TYNTL  GL + +  +RA  L  E   +    D  TY    DGL
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125

Query: 378 CVRPQVRFTYARRKGNSGN 396
           C R ++   +   K  SGN
Sbjct: 126 CKRGRIDEAFELVKEMSGN 144


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+    K  +  +   LF  +    + PD  TY+ +I   C+ G+V     +
Sbjct: 256 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ VT+T+LI G C E ++ EA +L  ++   G  PN++TY  L +GLC+
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM     E+      N  TY+ +++GLCK G +D+A +L   M+    
Sbjct: 376 CGEVDTANELLHEMCRKGLEL------NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 429

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VTYT+L+  +C + +   A  LL +M+D+ +QP VV+ NV+MN  C +G +++  +
Sbjct: 430 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 489

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M++  + PNA TYN+L+  +C+   +    E++  M + G   D  +YNILI G+C
Sbjct: 490 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++EA  L+ ++  KG   TV +YN L  G ++ ++   A +LF +M+   + AD  
Sbjct: 550 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 609

Query: 369 TYRTFID 375
            Y  F D
Sbjct: 610 IYNIFAD 616



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 184/352 (52%), Gaps = 8/352 (2%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           + VL L + +   GL P+ YTY+ +I   CK G+V+    +   ++    AP+ V +T+L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I G C    +  A  LF +++     P+ ITY  +I GLC+TG  + A  LF EM     
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           E      P+ VTY+ +IDG CKEG + +A  L  QM    L PN+VTYT+L  G C   +
Sbjct: 325 E------PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            + A  LL EM  +G++ N+ + N ++N LCK G +D A +L+  M      P+A TY T
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LMD +C + ++ R  EL   M     +    ++N+L+NG+C +  +E+   L   +  KG
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 328 IKPTVVTYNTLFHGLFEIRQAERA-LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           I P   TYN+L    + IR   RA  +++  M    V  D  TY   I G C
Sbjct: 499 IMPNATTYNSLIKQ-YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 167/316 (52%), Gaps = 6/316 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             PN  T+  +I  LC   ++ EA  +  ++ + G  P+ + Y TLI+G C+ G+   A 
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            LF EM            P+ +TY+ +I GLC+ G V +A +LF +M  + L P+ VTYT
Sbjct: 279 RLFDEMQKRK------ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LI G+C      EA  L  +M+  G+ PN+V+   + + LCK G++D A+ LL  M + 
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            +  N +TYN+L++G C  G I++  +L   ME  G   D  +Y  L++ YCK++E+  A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L  ++  + ++PTVVT+N L +G       E   KL   M    +  +  TY + I  
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512

Query: 377 LCVRPQVRFTYARRKG 392
            C+R  +R T    +G
Sbjct: 513 YCIRNNMRATTEIYRG 528



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 7/185 (3%)

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNG-------KMDNASRLLDLMVQCDVRPNAF 263
           A+ L  +M++ G+  +V S N+ ++ L ++        K +   +L++ M    ++PN +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN ++   C TGK+   + +   M S G   D   Y  LI+G+CK   V  A  L++E+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             + I P  +TY  +  GL +  +   A KLF EM    +  D  TY   IDG C   ++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 384 RFTYA 388
           +  ++
Sbjct: 345 KEAFS 349


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K       +   +R+ + G  PD +TY+ +I+ +CK+  V     +
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+ VT+ SLI GLCAE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM     E G    P+  TY+I+I+GLCK G +  A  +      +  
Sbjct: 376 QGLILHALQVMNEM----AEEGC--HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C     + A  L+  M + G+ P+ ++ N ++N LCK GK++  + 
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+     PN  TYN L++ FC + K+    ++ V M   G   D  S+N LI G+C
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL---FHGLFEIRQAERALKLFVEMQGNDVAA 365
           +N ++E A  L+ +L  KG   T  T+NTL   F G   +  AE   K+F EM      A
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 606

Query: 366 DTCTYRTFIDGLCVRPQVRFTY 387
           D+ TYR  IDG C    V   Y
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAY 628



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 14/381 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H H  P  +++FN +L  L K         L  ++   G+  +L+TY+I I   C+ G
Sbjct: 180 MLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +    +R+   P+VVT+ +LI+GLC +S   EA     ++   GC P+  TYN
Sbjct: 239 RLPEAVRLVDG-MRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 297

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAK 177
           T+I+G C+      A  L K+          VFK   P+ VTY  +I+GLC EG V++A 
Sbjct: 298 TIIDGYCKISMVQEATELLKD---------AVFKGFVPDQVTYCSLINGLCAEGDVERAL 348

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF + + + + P++V Y SL+ G C       A  ++ EM ++G  P++ + N+++N L
Sbjct: 349 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G + +A+ +++  +     P+ FT+NTL+DG+C   K++   +L   M   G   D 
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 468

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YN ++NG CK  +V E    + E+  KG  P  +TYN L        + E A K+ V+
Sbjct: 469 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 528

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M    +  D  ++ T I G C
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFC 549



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 58/374 (15%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQVSLG 65
           GCL  +  Y+T++  + +++ +             G  PD  TY  LIN  C  G V   
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F         P++V + SL+KGLC +  I+ A  +  ++   GC P++ TYN +ING
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 126 LCRTGH----TIV-------------------------------ALNLFKEMTNGNGEIG 150
           LC+ G+    T+V                               AL L + M     E G
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM----WEYG 463

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           +   P+T+TY+ +++GLCK G V++  E F +M  +  +PN +TY  LI  FC +N   E
Sbjct: 464 IA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  ++++M  +G+ P+ VS N ++   C+NG ++ A  L   + +      A T+NTL+ 
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 581

Query: 271 GFCLTGKIN--RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            F  +GK+N    +++F  M S G + D ++Y +LI+G CK   V+ A     E+  KG 
Sbjct: 582 AF--SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 639

Query: 329 KPTVVTYNTLFHGL 342
            P++ T+  + + L
Sbjct: 640 IPSMSTFGRVINSL 653



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 14/345 (4%)

Query: 36  RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
           RL+   + P LY  SI    + + G++      F R+      P    + +++  L   +
Sbjct: 46  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 102

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
              +A  ++ ++ A G  P++ T+   +   C T    +AL L + + +           
Sbjct: 103 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA-------- 154

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
             V Y  ++ GL   G    A++LF QM + ++ PN+  +  ++H  C   D  EA  LL
Sbjct: 155 --VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL 212

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +++ +G+  N+ + N+ +  LC+ G++  A RL+D M    V P+  TYNTL+ G C  
Sbjct: 213 GKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKK 271

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
                       M + GC  DDF+YN +I+GYCK   V+EA  L  +  FKG  P  VTY
Sbjct: 272 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +L +GL      ERAL+LF E Q   +  D   Y + + GLC++
Sbjct: 332 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 6/325 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L         L +   +   G  PD+ TY+I+IN  CKMG +S   V+
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF +LI G C   ++  A  L  ++  +G  P+ ITYN+++NGLC+
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        F+EM      I     PN +TY+I+I+  C+   +++A ++ ++M  E L
Sbjct: 481 AGKVNEVNETFQEM------ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ V++ +LI+GFC   D   A  L  ++ ++G      + N ++        M  A +
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+    R +++TY  L+DG C T  ++R     V M   G      ++  +IN   
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
            N  V +A+ + + +   G+ P VV
Sbjct: 655 VNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 31/252 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D+ L L +R+   G+ PD  TY+ ++N  CK G+V+     
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490

Query: 69  FGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F   IL+ C  PN +T+  LI+  C  +++ EA+ +  K+   G  P+ +++NTLI G C
Sbjct: 491 FQEMILKGCH-PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549

Query: 128 RTGHTIVALNLFKEMTNG---------NGEIGVV--------------------FKPNTV 158
           R G    A  LF+++            N  IG                       + ++ 
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 609

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY ++IDG CK   VD+A    ++M  +   P++ T+  +I+     +   +A G++  M
Sbjct: 610 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 669

Query: 219 VDQGVQPNVVSS 230
           V  GV P VV +
Sbjct: 670 VKIGVVPEVVDT 681



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 7/161 (4%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P  V+S   +    + G++ +A    + M      P A  YN +MD        ++  
Sbjct: 52  IHPLYVAS---IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 108

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +++V M + G   D  ++ I +  +C       AL L   LP +G     V Y T+  GL
Sbjct: 109 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGL 164

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +       A +LF +M    V  +   +   +  LC R  V
Sbjct: 165 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 204/384 (53%), Gaps = 12/384 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++NIL+   C A N   D  L+LF ++ + G  P++ TY+ LI+ +CK+ ++  GF
Sbjct: 203 PNVFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +      PN++++  +I GLC E R+ E + + T++   G   + +TYNTLI G 
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G+   AL +  EM            P+ +TY+ +I  +CK G +++A E   QM+  
Sbjct: 321 CKEGNFHQALVMHAEMLRHG------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN  TYT+L+ GF      NEA  +L EM D G  P+VV+ N ++N  C  GKM++A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L+ M +  + P+  +Y+T++ GFC +  ++    +   M   G K D  +Y+ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+ +  +EA  LY E+   G+ P   TY  L +        E+AL+L  EM    V  D
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

Query: 367 TCTYRTFIDGLCVRPQVRFTYARR 390
             TY   I+GL    Q R   A+R
Sbjct: 555 VVTYSVLINGL--NKQSRTREAKR 576



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 201/381 (52%), Gaps = 7/381 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNK-HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           +   H   P V S+N +L    ++K +     ++FK +    + P+++TY+ILI  FC  
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFA 218

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G + +   +F ++      PNVVT+ +LI G C   +I +   L   +   G EPN+I+Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N +INGLCR G       +  EM N  G     +  + VTY+ +I G CKEG   +A  +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M    L P+V+TYTSLIH  C A + N A   L +M  +G+ PN  +   +++   +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G M+ A R+L  M      P+  TYN L++G C+TGK+     +   M+  G   D  S
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ +++G+C++ +V+EAL +  E+  KGIKP  +TY++L  G  E R+ + A  L+ EM 
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512

Query: 360 GNDVAADTCTYRTFIDGLCVR 380
              +  D  TY   I+  C+ 
Sbjct: 513 RVGLPPDEFTYTALINAYCME 533



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 197/374 (52%), Gaps = 7/374 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFVIFG 70
           S F++++   ++    D  LS+     + G  P + +Y+ +++   +  + +S    +F 
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L S  +PNV T+  LI+G C    I  A  LF K++  GC PNV+TYNTLI+G C+  
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                  L + M     E      PN ++Y+++I+GLC+EG + +   +  +M     + 
Sbjct: 255 KIDDGFKLLRSMALKGLE------PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTY +LI G+C   ++++A  +  EM+  G+ P+V++   +++ +CK G M+ A   L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M    + PN  TY TL+DGF   G +N    +   M   G      +YN LING+C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++E+A+++  ++  KG+ P VV+Y+T+  G       + AL++  EM    +  DT TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 371 RTFIDGLCVRPQVR 384
            + I G C + + +
Sbjct: 489 SSLIQGFCEQRRTK 502



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 194/398 (48%), Gaps = 21/398 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+++  L +      V  +   +N  G   D  TY+ LI  +CK G      V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR    P+V+T+TSLI  +C    +  A     +++  G  PN  TY TL++G  +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + +EM N NG     F P+ VTY+ +I+G C  G ++ A  +   MK + L
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VV+Y++++ GFC + D +EA  +  EMV++G++P+ ++ + ++   C+  +   A  
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M++  + P+ FTY  L++ +C+ G + +  +L   M   G   D  +Y++LING  
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR---------------QAERALK 353
           K     EA  L  +L ++   P+ VTY+TL      I                    A +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           +F  M G +   D   Y   I G C    +R  Y   K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 207/400 (51%), Gaps = 45/400 (11%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  + K  + +  +    ++   GL P+  TY+ L++ F + G ++ 
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +  + F+P+VVT+ +LI G C   ++ +A A+   +K  G  P+V++Y+T+++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G CR+     AL + +EM     E G+  KP+T+TYS +I G C++    +A +L+ +M 
Sbjct: 459 GFCRSYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEML 512

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              L P+  TYT+LI+ +C   D  +A  L  EMV++GV P+VV+ +V++N L K  +  
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSME 289
            A RLL  +   +  P+  TY+TL++               GFC+ G +    ++F SM 
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF------ 343
               K D  +YNI+I+G+C+  ++ +A +LY E+   G     VT   L   L       
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692

Query: 344 -------------EIRQAERALKLFVEM---QGN-DVAAD 366
                        E+ +AE+A K+ VE+   +GN DV  D
Sbjct: 693 ELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLD 731



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 21/271 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+    + +       L++ +  +GL PD +TY+ LIN +C  G +     +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN---- 124
              ++     P+VVT++ LI GL  +SR  EA  L  KL      P+ +TY+TLI     
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 125 -----------GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
                      G C  G    A  +F+ M   N       KP+   Y+I+I G C+ G +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN------HKPDGTAYNIMIHGHCRAGDI 656

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            KA  L+ +M       + VT  +L+         NE   +++ ++          + V+
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVL 716

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           +    + G MD    +L  M +    PN  +
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 198/371 (53%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+    +  + +  L +   +   G  PD+YTY+ LI+  CK+G+      I
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320

Query: 69  FGR-ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             + ILR C +PN VT+ +LI  LC E+ I  A  L   L + G  P+V T+NTLI GLC
Sbjct: 321 LQQMILREC-SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC 379

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + +  +A+ +F+EM N         KP+  TYSI+ID LC E  + +A  L  +M+   
Sbjct: 380 LSKNQDIAMEMFEEMKNKGC------KPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N V Y +LI G C +    +A+ +  +M   GV  + V+ N +++ LCKN +++ AS
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L+D M+   ++P+ FTYN+L+  FC  G I +  ++  +M S GC+ D F+Y  LI G 
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGL 553

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+   V+ A  L   +  KGI  T   YN +   LF  ++ +  ++LF EM       D 
Sbjct: 554 CRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDA 613

Query: 368 CTYRTFIDGLC 378
            T++    GLC
Sbjct: 614 LTHKIVFRGLC 624



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 202/376 (53%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + +NI L  L ++     V  L  ++ + G+  D+ T+++LI   CK  Q+    ++
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ +TFT+L++G   E  +  A  +  ++  +GC    ++   L+NG C+
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL    E++         F P+ VT++ +++G C+ G V+ A ++   M  +  
Sbjct: 241 EGRVEEALRFVLEVSEEG------FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY SLI G C   ++ +A  +L +M+ +   PN V+ N +++ LCK  +++ A+ 
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  ++V   + P+  T+NTL+ G CL+   +   E+F  M++ GCK D+F+Y+ILI+  C
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + ++EAL L  E+   G     V YNTL  GL + R+ E A ++F +M+   V+  + 
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 369 TYRTFIDGLCVRPQVR 384
           TY T IDGLC   +V 
Sbjct: 475 TYNTLIDGLCKNKRVE 490



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 41/403 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS-------------------- 50
           VS+FN+L+  L K       + + + + + GL PD  T++                    
Sbjct: 158 VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKK 217

Query: 51  ---------------ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
                          +L+N FCK G+V         +    F+P+ VTF SL+ G C   
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
            + +A  +   +   G +P+V TYN+LI+G+C+ G    A+ + ++M      I     P
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM------ILRECSP 331

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           NTVTY+ +I  LCKE  ++ A +L   +  + L P+V T+ +LI G C + + + A  + 
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMF 391

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM ++G +P+  + +++++ LC   ++  A  LL  M       NA  YNTL+DG C +
Sbjct: 392 EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            +I   +E+F  ME +G      +YN LI+G CKNK VEEA  L +++  +G+KP   TY
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N+L      +   E+A  +   M  N    D  TY T I GLC
Sbjct: 512 NSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S  +L+    K    +  L     ++  G  PD  T++ L+N FC++G V+    I   +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   F P+V T+ SLI G+C      +A  +  ++    C PN +TYNTLI+ LC+    
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI 349

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L + + +          P+  T++ +I GLC     D A E+F +MK +   P+ 
Sbjct: 350 EAATDLARILVSKG------LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY+ LI   C+     EA  LL EM   G   N V  N +++ LCK+ ++++A  + D 
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V  ++ TYNTL+DG C   ++    +L   M   G K D F+YN L+  +C+  +
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  +   +   G +P + TY TL  GL    + + A KL   +Q   +      Y  
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583

Query: 373 FIDGLCVRPQVR 384
            I  L +R + +
Sbjct: 584 VIQALFMRKRTK 595



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 191/381 (50%), Gaps = 14/381 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           HP PP  +    LL  L ++  +D++ +L K+L S G  P+  T++ LI  F    ++  
Sbjct: 53  HPLPPNET----LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIEN 108

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I    L   F P+   +   +  L  ++++     L +K+   G   +V T+N LI 
Sbjct: 109 LLKILENELG--FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIK 166

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM- 183
            LC+      A+ + +EM N         KP+ +T++ ++ G  +EG ++ A ++  QM 
Sbjct: 167 ALCKAHQLRPAILMLEEMANHG------LKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
            Y  L  NV +   L++GFC      EA   ++E+ ++G  P+ V+ N ++N  C+ G +
Sbjct: 221 GYGCLLTNV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           ++A  ++D M++    P+ +TYN+L+ G C  G+  +  E+   M    C  +  +YN L
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+  CK  E+E A  L   L  KG+ P V T+NTL  GL   +  + A+++F EM+    
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399

Query: 364 AADTCTYRTFIDGLCVRPQVR 384
             D  TY   ID LC   +++
Sbjct: 400 KPDEFTYSILIDSLCYERRLK 420



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K    +    L + L S GL PD+ T++ LI   C      +   +
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T++ LI  LC E R+ EA  L  ++++ GC  N + YNTLI+GLC+
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A  +F +M      +GV    ++VTY+ +IDGLCK   V++A +L  QM  E L
Sbjct: 451 SRRIEDAEEIFDQME----LLGV--SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY SL+  FC   D  +A  ++  M   G +P++ +   ++  LC+ G++D AS+
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +      YN ++    +  +      LF  M       D  ++ I+  G C
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624

Query: 309 KNK-EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
                ++EA+    E+  KGI P   ++  L  GL  +   +  ++L
Sbjct: 625 NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIEL 671



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 158/345 (45%), Gaps = 9/345 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L  +K+ D  + +F+ + + G  PD +TYSILI+  C   ++    ++
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  A N V + +LI GLC   RI +A  +F +++  G   + +TYNTLI+GLC+
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  +M      I    KP+  TY+ ++   C+ G ++KA ++   M     
Sbjct: 486 NKRVEEASQLMDQM------IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TY +LI G C A   + A  LL  +  +G+     + N ++  L    +     R
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFC-LTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           L   M++    P+A T+  +  G C   G I    +  V M   G   +  S+  L  G 
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           C     +  + L N +  K       T  ++  G  +IR+   AL
Sbjct: 660 CSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFNDAL 702


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 200/351 (56%), Gaps = 7/351 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  L+S  +  + +   I   C  K  ++S+ +    +IL++ + P+ +T T+ IKG C
Sbjct: 216 LFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTP-PKILKNGYEPDTITLTTFIKGFC 274

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            + +I +A     K+ A G   + ++Y TLINGLC+ G T  AL L +         G +
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRND------GKL 328

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+ V Y+ IIDG+CK+  V+ A +L+ +   + + P+V TY +LI GFC      +A 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  +M  + + P+V + +++++  CK+G +  A  +L +M++  ++P+  TY++LMDG+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           CL  ++N+ + +F +M   G   +  SYNI+ING+CK K V+EA+ L+ E+  K I P V
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +TY++L  GL +  +   AL+L  EM       D  TY + +D LC +  V
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 192/359 (53%), Gaps = 8/359 (2%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL    H    L    ++ ++G   D  +Y  LIN  CK+G+      +  R       P
Sbjct: 274 CLKGQIH--QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQP 331

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +VV + ++I G+C +  + +A  L+++  +    P+V TYN LI+G C  G    A++LF
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLF 391

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            +MT+ N        P+  T+SI++DG CK+G + +AK +   M  +++ P+VVTY+SL+
Sbjct: 392 NKMTSKN------IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G+C  N+ N+A+ +   M  +GV  NV S N+++N  CK   +D A +L   M    + 
Sbjct: 446 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  TY++L+DG C +G+I+   EL   M   G + D  +YN +++  CK   V++A++L
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +L  +GI+P + TY  L  GL +  + E A K+F ++       D   Y   I G C
Sbjct: 566 LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC 624



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 205/387 (52%), Gaps = 18/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  + K+KH +    L+    S  +FPD++TY+ LI+ FC +G++     +
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+V TF+ L+ G C +  I EA  +   +     +P+V+TY++L++G C 
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M++     GV    N  +Y+I+I+G CK   VD+A +LF +M ++ +
Sbjct: 451 VNEVNKAESIFNTMSHR----GVT--ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY+SLI G C +   + A  L+ EM  +G QP++++ N I++ LCK   +D A  
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAIT 564

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +RP+  TY  L+ G C +GK+   +++F  +   G   D ++Y ++I G+C
Sbjct: 565 LLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC 624

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--------QG 360
                +EAL+L +++   G  P   TY  +   LFE  + + A KL  EM          
Sbjct: 625 DKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +D+ A     RT+    C R  +  T+
Sbjct: 685 DDLVASILVRRTW----CARLALWVTF 707



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 206/431 (47%), Gaps = 57/431 (13%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+PP +  F  +LG L K+KHY TVLSL +++   G+  +    +ILIN FC++G +   
Sbjct: 106 PTPPDIE-FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFA 164

Query: 66  FVIFGR------ILRSCFAPN--------------VVTFTSLIKGLCAESRI-------- 97
           F +  R      IL+ CF                 +  F  L      +SR+        
Sbjct: 165 FSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFK 224

Query: 98  --VEAAALFTK----LKAF--------------GCEPNVITYNTLINGLCRTGHTIVALN 137
             +E    F K    LK+F              G EP+ IT  T I G C  G    AL+
Sbjct: 225 ILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALH 284

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
              ++      I + F  + V+Y  +I+GLCK G    A EL  +   + + P+VV Y +
Sbjct: 285 FHDKV------IAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNT 338

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I G C     N+A  L  E V + + P+V + N +++  C  GK+ +A  L + M   +
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKN 398

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + P+ +T++ L+DGFC  G I   K +   M     K D  +Y+ L++GYC   EV +A 
Sbjct: 399 IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAE 458

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           S++N +  +G+   V +YN + +G  +I+  + A+KLF EM    +  D  TY + IDGL
Sbjct: 459 SIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGL 518

Query: 378 CVRPQVRFTYA 388
           C     R +YA
Sbjct: 519 C--KSGRISYA 527



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+  L K       L L +R +   + PD+  Y+ +I+  CK   V+  F ++   
Sbjct: 300 SYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P+V T+ +LI G C   ++ +A  LF K+ +    P+V T++ L++G C+ G+ 
Sbjct: 360 VSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNI 419

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N+   M   +       KP+ VTYS ++DG C    V+KA+ +F  M +  +  NV
Sbjct: 420 KEAKNVLAMMMKQS------IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 473

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +Y  +I+GFC     +EA  L  EM  + + P+V++ + +++ LCK+G++  A  L+D 
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M     +P+  TYN+++D  C    +++   L   ++  G + D  +Y IL+ G C++ +
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  ++ +L  KG    V  Y  +  G  +    + AL L  +M+ N    D  TY  
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653

Query: 373 FIDGL 377
            I  L
Sbjct: 654 IILSL 658



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P + ++N +L  L K  H D  ++L  +L   G+ PD+ TY+IL+   C+ G++
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +L   +  +V  +T +I+G C +    EA AL +K++  GC P+  TY  +
Sbjct: 595 EDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L       +A  L +EM
Sbjct: 655 ILSLFEKDENDMAEKLLREM 674


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+    K  +  +   LF  +    + PD  TY+ +I   C+ G+V     +
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     P+ VT+T+LI G C E ++ EA +L  ++   G  PN++TY  L +GLC+
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM     E+      N  TY+ +++GLCK G +D+A +L   M+    
Sbjct: 476 CGEVDTANELLHEMCRKGLEL------NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VTYT+L+  +C + +   A  LL +M+D+ +QP VV+ NV+MN  C +G +++  +
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M++  + PNA TYN+L+  +C+   +    E++  M + G   D  +YNILI G+C
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++EA  L+ ++  KG   TV +YN L  G ++ ++   A +LF +M+   + AD  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 369 TYRTFID 375
            Y  F D
Sbjct: 710 IYNIFAD 716



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 197/381 (51%), Gaps = 6/381 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +S+NI+   L +         L  ++   G  PD+ +YS +IN +C++G++     +   
Sbjct: 254 ASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEE 313

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +      PN  T+  +I  LC   ++ EA  +  ++ + G  P+ + Y TLI+G C+ G+
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  LF EM            P+ +TY+ +I GLC+ G V +A +LF +M  + L P+
Sbjct: 374 VSSAYRLFDEMQKRK------ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTYT+LI G+C      EA  L  +M+  G+ PN+V+   + + LCK G++D A+ LL 
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  +  N +TYN+L++G C  G I++  +L   ME  G   D  +Y  L++ YCK++
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           E+  A  L  ++  + ++PTVVT+N L +G       E   KL   M    +  +  TY 
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 372 TFIDGLCVRPQVRFTYARRKG 392
           + I   C+R  +R T    +G
Sbjct: 608 SLIKQYCIRNNMRATTEIYRG 628



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 191/371 (51%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ ++    +      VL L + +   GL P+ YTY+ +I   CK G+V+    +
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    AP+ V +T+LI G C    +  A  LF +++     P+ ITY  +I GLC+
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  LF EM     E      P+ VTY+ +IDG CKEG + +A  L  QM    L
Sbjct: 406 TGRVMEADKLFHEMVCKRLE------PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTYT+L  G C   + + A  LL EM  +G++ N+ + N ++N LCK G +D A +
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M      P+A TY TLMD +C + ++ R  EL   M     +    ++N+L+NG+C
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA-LKLFVEMQGNDVAADT 367
            +  +E+   L   +  KGI P   TYN+L    + IR   RA  +++  M    V  D 
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ-YCIRNNMRATTEIYRGMCAKGVVPDG 638

Query: 368 CTYRTFIDGLC 378
            TY   I G C
Sbjct: 639 NTYNILIKGHC 649



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 192/403 (47%), Gaps = 32/403 (7%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK-MGQVSLG 65
           S P V  F+I    L +    D    LF ++ + GL   + + ++ I+   + +  + + 
Sbjct: 180 SDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA 237

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F          N  ++  +   LC   R+VEA  L  +++  GC P+VI+Y+T+ING
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 126 LCRTGHTIVALNLFKEMT---------NGNGEIGVVFK--------------------PN 156
            C+ G     L L +EM            NG I ++ K                    P+
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V Y+ +IDG CK G V  A  LF +M+   ++P+ +TYT++I G C      EA  L  
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV + ++P+ V+   +++  CK GKM  A  L + M+Q  + PN  TY  L DG C  G
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +++   EL   M   G + + ++YN L+NG CK   +++A+ L  ++   G  P  VTY 
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           TL     + R+  RA +L  +M   ++     T+   ++G C+
Sbjct: 538 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 580



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 9/282 (3%)

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           K +G +P V  ++     L   G    A  LF +M N     G++   ++   ++ I  L
Sbjct: 176 KDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLN----YGLLISVDSC--NLFISHL 227

Query: 168 CKE-GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            ++   +  A ++F++     +  N  +Y  + H  C      EA  LL++M  +G  P+
Sbjct: 228 SEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPD 287

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V+S + ++N  C+ G++    +L++ M    ++PN +TYN ++   C TGK+   + +  
Sbjct: 288 VISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLR 347

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M S G   D   Y  LI+G+CK   V  A  L++E+  + I P  +TY  +  GL +  
Sbjct: 348 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG 407

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           +   A KLF EM    +  D  TY   IDG C   +++  ++
Sbjct: 408 RVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 181/310 (58%), Gaps = 10/310 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+VVTFT+L+ GLC E R+++A AL  ++   G +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             +M   +       K + V Y+ IID LCK+G    A+ LF +M  + + P+V+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I  FC +  W +A+ LL +M+++ + P+VV+ + ++N L K GK+  A  +   M++  +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            P   TYN+++DGFC   ++N  K +  SM S  C  D  +++ LINGYCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++ E+  +GI    VTY TL HG  ++   + A  L   M  + VA +  T+++ +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 379 VRPQVRFTYA 388
            + ++R  +A
Sbjct: 298 SKKELRKAFA 307



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 172/322 (53%), Gaps = 10/322 (3%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ T++ L+N  C  G+V     +  R++     P    + ++I GLC       A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L +K++    + +V+ YN +I+ LC+ GH I A NLF EM +       +F P+ +TY
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG-----IF-PDVITY 114

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +ID  C+ G    A++L   M    +NP+VVT+++LI+        +EA+ +  +M+ 
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+ P  ++ N +++  CK  ++++A R+LD M      P+  T++TL++G+C   +++ 
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             E+F  M   G   +  +Y  LI+G+C+  +++ A  L N +   G+ P  +T+ ++  
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294

Query: 341 GLFEIRQAERALKLFVEMQGND 362
            L   ++  +A  +  ++Q ++
Sbjct: 295 SLCSKKELRKAFAILEDLQKSE 316



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 33/316 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L         L+L  R+   G  P    Y  +IN  CKMG       +
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +    +VV + ++I  LC +   + A  LFT++   G  P+VITY+ +I+  CR
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
           +G    A  L ++M        VV                               P T+T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +IDG CK+  ++ AK +   M  ++ +P+VVT+++LI+G+C A   +    +  EM 
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+  N V+   +++  C+ G +D A  LL++M+   V PN  T+ +++   C   ++ 
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303

Query: 280 RVKELFVSMESMGCKH 295
           +   +   ++     H
Sbjct: 304 KAFAILEDLQKSEGHH 319



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 33/208 (15%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV----------------------- 254
           MV+ G +P+VV+   +MN LC  G++  A  L+D MV                       
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60

Query: 255 --------QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                   +  ++ +   YN ++D  C  G     + LF  M   G   D  +Y+ +I+ 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C++    +A  L  ++  + I P VVT++ L + L +  +   A +++ +M    +   
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 367 TCTYRTFIDGLCVRPQVRFTYARRKGNS 394
           T TY + IDG C   Q R   A+R  +S
Sbjct: 181 TITYNSMIDGFC--KQDRLNDAKRMLDS 206


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 185/341 (54%), Gaps = 9/341 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L + G  PD+ TY++LI  +CK G++     +  R+     AP+VVT+ ++++ LC   +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA  +  +     C P+VITY  LI   C       A+ L  EM           KP+
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPD 278

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+++I+G+CKEG +D+A +    M      PNV+T+  ++   C    W +A+ LL 
Sbjct: 279 VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+ +G  P+VV+ N+++N LC+   +  A  +L+ M +    PN+ +YN L+ GFC   
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK 398

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K++R  E    M S GC  D  +YN L+   CK+ + + A+ + N+L  KG  P ++TYN
Sbjct: 399 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           T+  GL ++ + E A +L  EM+   +  D  TY T + GL
Sbjct: 459 TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 197/375 (52%), Gaps = 11/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+G   K+   D  L + +R++   + PD+ TY+ ++   C  G++     +
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 231

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R + R C+ P+V+T+T LI+  C +S + +A  L  +++  GC+P+V+TYN LING+C
Sbjct: 232 LDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+     M           +PN +T++II+  +C  G    A+ L   M  + 
Sbjct: 291 KEGRLDEAIKFLNNMPLYG------CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++  C+  KMD A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L++MV     P+  TYNTL+   C  GK +   E+   + S GC     +YN +I+G 
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  + E A  L  E+  KG+KP ++TY+TL  GL    + + A+K+F +M+G  +    
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 368 CTYRTFIDGLCVRPQ 382
            TY   + GLC   Q
Sbjct: 525 VTYNAIMLGLCKAQQ 539



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L  +      + +  R      +PD+ TY+ILI   C    V     +
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+VVT+  LI G+C E R+ EA      +  +GC+PNVIT+N ++  +C 
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG  + A  L  +M            P+ VT++I+I+ LC++  + +A ++  +M     
Sbjct: 327 TGRWMDAERLLADMLRKG------CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 380

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  L+HGFC     + A   L  MV +G  P++V+ N ++  LCK+GK D A  
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +      P   TYNT++DG    GK     EL   M   G K D  +Y+ L+ G  
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +V+EA+ +++++    IKP+ VTYN +  GL + +Q  RA+     M          
Sbjct: 501 CEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 561 TYTILIEGI 569



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 47  YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
           +  +I +    + G++  G     R++     P+V+  TSLI+G C   +  +A  +   
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           L+  G  P+VITYN LI G C++G    AL + + M+           P+ VTY+ I+  
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---------VAPDVVTYNTILRS 218

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC  G + +A E+  +       P+V+TYT LI   C+ +   +A  LL EM  +G +P+
Sbjct: 219 LCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 278

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV+ NV++N +CK G++D A + L+ M     +PN  T+N ++   C TG+    + L  
Sbjct: 279 VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   GC     ++NILIN  C+ + +  A+ +  ++P  G  P  ++YN L HG  + +
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK 398

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +RA++    M       D  TY T +  LC
Sbjct: 399 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 430



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 6/198 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    + K  D  +   + + S G +PD+ TY+ L+   CK G+   
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++     +P ++T+ ++I GL    +   AA L  +++  G +P++ITY+TL+ 
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL   G    A+ +F +M       G+  KP+ VTY+ I+ GLCK     +A +    M 
Sbjct: 498 GLGCEGKVDEAIKIFHDME------GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 551

Query: 185 YENLNPNVVTYTSLIHGF 202
            +   P   TYT LI G 
Sbjct: 552 EKGCKPTKATYTILIEGI 569



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 38/83 (45%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           ++F+ NI +    +N E+EE L     + ++G  P V+   +L  G     +  +A ++ 
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
             ++ +    D  TY   I G C
Sbjct: 166 EILENSGAVPDVITYNVLIGGYC 188


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 181/310 (58%), Gaps = 10/310 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+VVTFT+L+ GLC E R+++A AL  ++   G +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             +M   +       K + V Y+ IID LCK+G    A+ LF +M  + + P+V+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I  FC +  W +A+ LL +M+++ + P+VV+ + ++N L K GK+  A  +   M++  +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            P   TYN+++DGFC   ++N  K +  SM S  C  D  +++ LINGYCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++ E+  +GI    VTY TL HG  ++   + A  L   M  + VA +  T+++ +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 379 VRPQVRFTYA 388
            + ++R  +A
Sbjct: 298 SKKELRKAFA 307



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 173/323 (53%), Gaps = 10/323 (3%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ T++ L+N  C  G+V     +  R++     P    + ++I GLC       A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L +K++    + +V+ YN +I+ LC+ GH I A NLF EM +       +F P+ +TY
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG-----IF-PDVITY 114

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +ID  C+ G    A++L   M    +NP+VVT+++LI+        +EA+ +  +M+ 
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+ P  ++ N +++  CK  ++++A R+LD M      P+  T++TL++G+C   +++ 
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             E+F  M   G   +  +Y  LI+G+C+  +++ A  L N +   G+ P  +T+ ++  
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294

Query: 341 GLFEIRQAERALKLFVEMQGNDV 363
            L   ++  +A  +  ++Q ++V
Sbjct: 295 SLCSKKELRKAFAILEDLQKSEV 317



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 161/325 (49%), Gaps = 10/325 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L         L+L  R+   G  P    Y  +IN  CKMG       +
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +    +VV + ++I  LC +   + A  LFT++   G  P+VITY+ +I+  CR
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  L ++M      I     P+ VT+S +I+ L KEG V +A+E++  M    +
Sbjct: 124 SGRWTDAEQLLRDM------IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  +TY S+I GFC  +  N+AK +L  M  +   P+VV+ + ++N  CK  ++DN   
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  +  N  TY TL+ GFC  G ++  ++L   M S G   +  ++  ++   C
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
             KE+ +A ++  +L    + P +V
Sbjct: 298 SKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 6/222 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++    ++  +     L + +    + PD+ T+S LIN   K G+VS    I
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +G +LR    P  +T+ S+I G C + R+ +A  +   + +  C P+V+T++TLING C+
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + +F EM       G+V   NTVTY+ +I G C+ G +D A++L   M    +
Sbjct: 229 AKRVDNGMEIFCEMHRR----GIV--ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
            PN +T+ S++   C   +  +A  +L ++    V P +V +
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIVQA 324



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 33/208 (15%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV----------------------- 254
           MV+ G +P+VV+   +MN LC  G++  A  L+D MV                       
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60

Query: 255 --------QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                   +  ++ +   YN ++D  C  G     + LF  M   G   D  +Y+ +I+ 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C++    +A  L  ++  + I P VVT++ L + L +  +   A +++ +M    +   
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 367 TCTYRTFIDGLCVRPQVRFTYARRKGNS 394
           T TY + IDG C   Q R   A+R  +S
Sbjct: 181 TITYNSMIDGFC--KQDRLNDAKRMLDS 206


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 198/371 (53%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++   + + H+     +F+++ S GL PD  T+S  ++  CK G+      I
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++V+++ L+ G   E R  +   LF  +   G   N    N LI+   +
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +F EM  G G      +PN VTYS +I   C+ G +  A E F QM    +
Sbjct: 420 RGMMDEAMLVFTEM-QGQG-----VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMDNAS 247
            PN   Y SLIHGFC   D  +AK  + EM+ +G+ +PN+V  + I++ LC  G++ +A 
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            + +L++    RP   T+N+L+DG+CL GK+ +   +  +M S+G + D  + N L++GY
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGY 593

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+ ++++ L L+ E+  K +KPT VTYN +  GL    +   A K+F EM  +  A D 
Sbjct: 594 CKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDI 653

Query: 368 CTYRTFIDGLC 378
            TY+  + GLC
Sbjct: 654 DTYKILLKGLC 664



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ILL   A    +  + +LF  +   G+  + +  +ILI+   K G +    ++
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLV 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+++LI   C   R+ +A   F+++ + G EPN   Y++LI+G C 
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A     EM +       + +PN V +S II  LC EG V  A+++F  + +   
Sbjct: 490 HGDLVKAKEFISEMMSKG-----LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGD 544

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P +VT+ SLI G+C      +A G+L  MV  G++P+VV++N +++  CK+GK+D+   
Sbjct: 545 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLI 604

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V+P   TYN ++DG    G+ +  K++F  M   G   D  +Y IL+ G C
Sbjct: 605 LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA++L+++L     K  +   NT+ + L+++R+ E A  LF  +  + +  +  
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVS 724

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 725 TYGVMIRNL 733



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 193/376 (51%), Gaps = 9/376 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P  V ++ IL+ C  + +  D   +   RL   GL       +  + C C   +     
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLI 123
            V+  R+      P+ +++ ++IK LC +SR  EA  +  ++   G  C P+V+++NT+I
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G    A NLF EM     + GVV  P+  TY+ I+D LCK   +DKA+ +  QM
Sbjct: 240 HGFFKQGEVSKACNLFNEMV----QKGVV--PDVGTYNSIVDALCKARAMDKAEFVLRQM 293

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + + P+ VTY ++IHG+  +  W E+  +  +M  +G+ P+ V+ +  M+ LCK+G+ 
Sbjct: 294 VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +A  +   M      P+  +Y+ L+ G+   G+   +  LF SM   G   +    NIL
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+ + K   ++EA+ ++ E+  +G++P VVTY+TL      + +   A++ F +M    +
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 364 AADTCTYRTFIDGLCV 379
             +T  Y + I G C+
Sbjct: 474 EPNTAVYHSLIHGFCM 489



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 175/355 (49%), Gaps = 7/355 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            NIL+   AK    D  + +F  +   G+ P++ TYS LI+ FC+MG+++     F +++
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                PN   + SLI G C    +V+A    +++ + G   PN++ ++++I+ LC  G  
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A ++F      N  I +  +P  VT++ +IDG C  G ++KA  +   M    + P+V
Sbjct: 530 MDAQDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 583

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT  +L+ G+C +   ++   L  EM+ + V+P  V+ N++++ L + G+   A ++   
Sbjct: 584 VTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHE 643

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+      +  TY  L+ G C     +    LF  + +M CK D    N +IN   K + 
Sbjct: 644 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRR 703

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            EEA  L+  +   G+ P V TY  +   L +    E A  +F  M+ +  A  +
Sbjct: 704 REEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 6/269 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+         +    +   + S+G+ PD+ T + L++ +CK G++  G ++
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P  VT+  ++ GL    R   A  +F ++   G   ++ TY  L+ GLCR
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  A+ LF ++    G +   F  +    + +I+ L K    ++A +LF  +    L
Sbjct: 666 NDLTDEAITLFHKL----GAMDCKF--DITILNTMINALYKVRRREEANDLFAAISTSGL 719

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  +I          EA  +   M   G  P+    N I+  L + G +  A  
Sbjct: 720 VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 779

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
            +  +    +   A T + LM  F   GK
Sbjct: 780 YMSKVDGTIISLEASTTSLLMSLFSSKGK 808


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 204/367 (55%), Gaps = 6/367 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P    +  L+    K          F  ++S  + PD+ TY+ +I+ FC++G +     +
Sbjct: 772  PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  +L     P+++TFT L+ G C    I +A  +   +   GC PNV+TY TLI+GLC+
Sbjct: 832  FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  L  EM     +IG+  +PN  TY+ I++GLCK G +++A +L  + +   L
Sbjct: 892  EGDLDSANELLHEM----WKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            N + VTYT+L+  +C + + ++A+ +L EM+ +G+QP +V+ NV+MN  C +G +++  +
Sbjct: 946  NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LL+ M+   + PNA T+N L+  +C+   +     ++  M S G + D  +Y  L+ G+C
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              + ++EA  L+ E+  KG   +V TY+ L  G F+ ++   A ++F +M+ + +AAD  
Sbjct: 1066 NARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKE 1125

Query: 369  TYRTFID 375
             +  F D
Sbjct: 1126 IFDFFSD 1132



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 200/371 (53%), Gaps = 7/371 (1%)

Query: 11  VSSFNILLGCLAKN-KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V S N+ L  L+K+     T + +F+    +G+  ++ +Y+I+I+  C++G+++    + 
Sbjct: 633 VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL 692

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +    + P+V++++++I G C    + +   L  K+K  G +PN  TY ++I  LCR 
Sbjct: 693 LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A   F EM      IG    P+T+ Y+ ++DG CK G +  A + F +M   ++ 
Sbjct: 753 CKLAEAEEAFSEM------IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT 806

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V+TYT++I GFC   D  EA  L  EM+ +G++P++++   +MN  CK G + +A R+
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            + M+Q    PN  TY TL+DG C  G ++   EL   M  +G + + F+YN ++NG CK
Sbjct: 867 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 926

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  +EEA+ L  E    G+    VTY TL     +  + ++A ++  EM G  +     T
Sbjct: 927 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVT 986

Query: 370 YRTFIDGLCVR 380
           +   ++G C+ 
Sbjct: 987 FNVLMNGFCLH 997



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 191/382 (50%), Gaps = 8/382 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   ++  ++G L +          F  +   G+ PD   Y+ L++ FCK G +      
Sbjct: 737  PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  +      P+V+T+T++I G C    +VEA  LF ++   G EP++IT+  L+NG C+
Sbjct: 797  FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCK 856

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             GH   A  +   M            PN VTY+ +IDGLCKEG +D A EL  +M    L
Sbjct: 857  AGHIKDAFRVHNHMIQAGCS------PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             PN+ TY S+++G C + +  EA  L+ E    G+  + V+   +M+  CK+G+MD A  
Sbjct: 911  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +L  M+   ++P   T+N LM+GFCL G +   ++L   M + G   +  ++N L+  YC
Sbjct: 971  ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                ++ A ++Y ++  +G++P   TY  L  G    R  + A  LF EM+G   +    
Sbjct: 1031 IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVS 1090

Query: 369  TYRTFIDGLCVRPQVRFTYARR 390
            TY   I G   R   +F  AR 
Sbjct: 1091 TYSVLIKGFFKRK--KFVEARE 1110



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 202/378 (53%), Gaps = 6/378 (1%)

Query: 11   VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            V+S+NI++  + +    +    L   +   G  PD+ +YS +IN +C+ G++   + +  
Sbjct: 669  VASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIE 728

Query: 71   RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++ +    PN  T+ S+I  LC   ++ EA   F+++   G  P+ I Y TL++G C+ G
Sbjct: 729  KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 131  HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                A   F EM + +        P+ +TY+ II G C+ G + +A +LF +M    L P
Sbjct: 789  DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP 842

Query: 191  NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            +++T+T L++G+C A    +A  +   M+  G  PNVV+   +++ LCK G +D+A+ LL
Sbjct: 843  DIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 902

Query: 251  DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
              M +  ++PN FTYN++++G C +G I    +L    E+ G   D  +Y  L++ YCK+
Sbjct: 903  HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962

Query: 311  KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             E+++A  +  E+  KG++PT+VT+N L +G       E   KL   M    +A +  T+
Sbjct: 963  GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022

Query: 371  RTFIDGLCVRPQVRFTYA 388
               +   C+R  ++   A
Sbjct: 1023 NCLVKQYCIRNNLKAATA 1040



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 29/320 (9%)

Query: 33   LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
            LF  +   GL PD+ T++ L+N +CK G +   F +   ++++  +PNVVT+T+LI GLC
Sbjct: 831  LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890

Query: 93   AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG------- 145
             E  +  A  L  ++   G +PN+ TYN+++NGLC++G+   A+ L  E           
Sbjct: 891  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950

Query: 146  -----------NGE-----------IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                       +GE           +G   +P  VT++++++G C  G ++  ++L   M
Sbjct: 951  TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010

Query: 184  KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              + + PN  T+  L+  +C  N+   A  +  +M  +GV+P+  +   ++   C    M
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070

Query: 244  DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
              A  L   M       +  TY+ L+ GF    K    +E+F  M   G   D   ++  
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFF 1130

Query: 304  INGYCKNKEVEEALSLYNEL 323
             +   K K  +  +   +E+
Sbjct: 1131 SDTKYKGKRPDTIVDPIDEI 1150



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           EA+ +  +M++ G+  +V S NV +  L K+  K   A  +     +  V  N  +YN +
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIV 675

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   C  G+IN    L + ME  G   D  SY+ +INGYC+  E+++   L  ++  KG+
Sbjct: 676 IHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGL 735

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           KP   TY ++   L  I +   A + F EM G  +  DT  Y T +DG C R  +R
Sbjct: 736 KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 217/413 (52%), Gaps = 30/413 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+  L    H    LS+ + +   G  P++ TY+ L+  F + G+V     +
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +L     PN+VTF S++ G+C   ++ +A  +F ++   G  P+ ++YNTL+ G C+
Sbjct: 208 VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCK 267

Query: 129 TGHTIVALNLFKEMTN--------------------GNGEIGVVF---------KPNTVT 159
            G +  AL++F EMT                     GN E  V           + N VT
Sbjct: 268 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT 327

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +IDG CK+GF+D A      M+   + P+VV Y +LI+G+C     +EA+ LL EM 
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P+VV+ + I++  CKN    +A  L   M++  V P+A TY++L+   C   +++
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLS 447

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF +M  +G + D+F+Y  LI+G+CK   VE ALSL++++   G+ P VVTY+ L 
Sbjct: 448 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLI 507

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           +GL +  +A  A +L  ++   +       Y   +   C + +++   A  KG
Sbjct: 508 NGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH-CCRKAELKSVLALLKG 559



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 196/370 (52%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L+ +    +    F  + S G+ P++YTY+ILI   C  G       I
Sbjct: 114 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNVVT+ +L+        +  A  L   +   G +PN++T+N+++NG+C+
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F EM            P+ V+Y+ ++ G CK G   +A  +F +M  + +
Sbjct: 233 AGKMEDARKVFDEMMREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+TSLIH  C A +   A  L+ +M ++G+Q N V+   +++  CK G +D+A  
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M QC ++P+   YN L++G+C+ G+++  +EL   ME+ G K D  +Y+ +I+ YC
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +   A  L  ++  KG+ P  +TY++L   L E ++   A  LF  M    +  D  
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 369 TYRTFIDGLC 378
           TY + IDG C
Sbjct: 467 TYTSLIDGHC 476



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 192/383 (50%), Gaps = 23/383 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  + K  + +  ++L +++   GL  +  T++ LI+ FCK G +    + 
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R +R C   P+VV + +LI G C   R+ EA  L  +++A G +P+V+TY+T+I+  C
Sbjct: 348 V-RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  A  L ++M     E GV+  P+ +TYS +I  LC+E  +  A  LF  M    
Sbjct: 407 KNCDTHSAFELNQQML----EKGVL--PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TYTSLI G C   +   A  L  +MV  GV P+VV+ +V++N L K+ +   A 
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520

Query: 248 RLL---------------DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +LL               D ++ C  +    +   L+ GFC+ G +N   +++ SM    
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D   Y++LI+G+C+   V +ALS + ++  +G  P   +  +L  GLFE      A 
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640

Query: 353 KLFVEMQGNDVAADTCTYRTFID 375
           ++  ++      AD    +  ID
Sbjct: 641 QVIQQLLNCCSLADAEASKALID 663



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 155/338 (45%), Gaps = 21/338 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+         D    L   + + GL PD+ TYS +I+ +CK       F +
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+ +T++SLI+ LC E R+ +A  LF  +   G +P+  TY +LI+G C+
Sbjct: 418 NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 477

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  +M       GV+  P+ VTYS++I+GL K     +A++L  ++ +E  
Sbjct: 478 EGNVERALSLHDKMVKA----GVL--PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 189 NPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            P    Y +L+H               GFC     NEA  +   M+D+    +    +V+
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 591

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  C+ G +  A      M+Q    PN+ +  +L+ G    G +    ++   + +   
Sbjct: 592 IHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCS 651

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
             D  +   LI+       V+  L + + +   G+ P+
Sbjct: 652 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 216/413 (52%), Gaps = 30/413 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+  L    H    LS+ + +   G  P++ TY+ L+  F + G+V     +
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      PN+VTF S++ G+C   ++ +A  +F ++   G  P+ ++YNTL+ G C+
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307

Query: 129 TGHTIVALNLFKEMTN--------------------GNGEIGVVF---------KPNTVT 159
            G +  AL++F EMT                     GN E  V           + N VT
Sbjct: 308 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +IDG CK+GF+D A      MK   + P+VV Y +LI+G+C     +EA+ LL EM 
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P+VV+ + I++  CKN    +A  L   M++  V P+A TY++L+   C   +++
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF +M  +G + D+F+Y  LI+G+CK   VE ALSL++++   G+ P VVTY+ L 
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           +GL +  +A  A +L  ++   D       Y   +   C + +++   A  KG
Sbjct: 548 NGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVLALLKG 599



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 196/370 (52%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L  L+ +    +    F  + S G+ P++YTY+IL+   C  G       I
Sbjct: 154 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNVVT+ +L+        +  A  L   ++  G +PN++T+N+++NG+C+
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F EM            P+ V+Y+ ++ G CK G   +A  +F +M  + +
Sbjct: 273 AGKMEDARKVFDEMVREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+TSLIH  C A +   A  L+ +M ++G+Q N V+   +++  CK G +D+A  
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M QC ++P+   YN L++G+C+ G+++  +EL   ME+ G K D  +Y+ +I+ YC
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +   A  L  ++  KG+ P  +TY++L   L   ++   A  LF  M    +  D  
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 369 TYRTFIDGLC 378
           TY + IDG C
Sbjct: 507 TYTSLIDGHC 516



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 189/383 (49%), Gaps = 23/383 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  + K  + +  ++L +++   GL  +  T++ LI+ FCK G +    + 
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R ++ C   P+VV + +LI G C   R+ EA  L  +++A G +P+V+TY+T+I+  C
Sbjct: 388 V-RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T  A  L ++M     E GV+  P+ +TYS +I  LC E  +  A  LF  M    
Sbjct: 447 KNCDTHSAFELNQQML----EKGVL--PDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TYTSLI G C   +   A  L  +MV  GV P+VV+ +V++N L K+ +   A 
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560

Query: 248 RLLDLMVQCDVRPNAFTYNTLM---------------DGFCLTGKINRVKELFVSMESMG 292
           +LL  +   D  P    Y+ LM                GFC+ G +N   +++ SM    
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D   Y++LI+G+C+   V +ALS + ++   G  P   +  +L  GLFE      A 
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEAD 680

Query: 353 KLFVEMQGNDVAADTCTYRTFID 375
           ++  ++      AD    +  ID
Sbjct: 681 QVIQQLLNYCSLADAEASKALID 703



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 156/338 (46%), Gaps = 21/338 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+         D    L   + + GL PD+ TYS +I+ +CK       F +
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+ +T++SLI+ LC E R+ +A  LF  +   G +P+  TY +LI+G C+
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+L  +M       GV+  P+ VTYS++I+GL K     +A++L  ++ +E+ 
Sbjct: 518 EGNVESALSLHDKMVKA----GVL--PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 189 NPNVVTYTSLIH---------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            P    Y +L+H               GFC     NEA  +   M+D+    +    +V+
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  C+ G +  A      M+Q    PN+ +  +L+ G    G +    ++   + +   
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCS 691

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
             D  +   LI+       V+  L + + +   G+ P+
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 192/372 (51%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++         D    L   + ++ + PD YTY+ LI   C  G+      +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRL---VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR    P+VVT+T L++  C  S   +A  L  +++  GC P+++TYN ++NG+C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+   K + +   E      PNTV+Y+I++ GLC     + A++L  +M  +  
Sbjct: 235 EGRVDDAMEFLKSLPSYGCE------PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVT+  LI   C       A  +L ++   G  PN +S N I++  CK  KMD A  
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            ++LMV     P+  +YNTL+   C  G+++   EL   ++  GC     SYN +I+G  
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + EEAL L NE+  KG++P ++TY+T+  GL    + E A+K F ++Q   +  +T 
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTV 468

Query: 369 TYRTFIDGLCVR 380
            Y   + GLC R
Sbjct: 469 LYNAILLGLCKR 480



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 180/372 (48%), Gaps = 6/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L      D  L++   +   G  PD+ TY+IL+   CK       
Sbjct: 147 PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +     AP++VT+  ++ G+C E R+ +A      L ++GCEPN ++YN ++ G
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM+           PN VT++++I  LC+ G V+ A E+  Q+  
Sbjct: 267 LCTAERWEDAEKLMAEMSRKG------RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK 320

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN ++Y  ++H FC     + A   +  MV  G  P++VS N ++  LC+ G++D 
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDA 380

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  +      P   +YNT++DG    GK     EL   M + G + D  +Y+ + +
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISS 440

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +EEA+  + ++   GI+P  V YN +  GL + R    A+ LF  M  N    
Sbjct: 441 GLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMP 500

Query: 366 DTCTYRTFIDGL 377
           +  TY   I+GL
Sbjct: 501 NESTYTILIEGL 512



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 162/361 (44%), Gaps = 78/361 (21%)

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI--------------------------- 117
            +LIK LCA  R  EA  +        CEP+V+                           
Sbjct: 94  AALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM 148

Query: 118 -----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI---------- 162
                TYNTLI GLC  G T  AL +  +M       G V  P+ VTY+I          
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR----GCV--PDVVTYTILLEATCKRSG 202

Query: 163 -------------------------IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
                                    +++G+C+EG VD A E    +      PN V+Y  
Sbjct: 203 YKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNI 262

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           ++ G C A  W +A+ L+ EM  +G  PNVV+ N++++ LC+ G ++ A  +LD + +  
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             PN+ +YN ++  FC   K++R       M S GC  D  SYN L+   C+  EV+ A+
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L ++L  KG  P +++YNT+  GL +  + E AL+L  EM    +  D  TY T   GL
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442

Query: 378 C 378
           C
Sbjct: 443 C 443



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 16/200 (8%)

Query: 190 PNVVTYTSL-----IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKM 243
           PN V + S      +       D  EA  L+  M   G++P+       ++ +LC +G+ 
Sbjct: 49  PNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRT 106

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A R+L     C+  P+  +YN ++ G+C+TG+++  + L  +M     + D ++YN L
Sbjct: 107 AEARRVL---ASCE--PDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTL 158

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I G C     + AL++ +++  +G  P VVTY  L     +    ++A+KL  EM+    
Sbjct: 159 IRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGC 218

Query: 364 AADTCTYRTFIDGLCVRPQV 383
           A D  TY   ++G+C   +V
Sbjct: 219 APDIVTYNVVVNGICQEGRV 238



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 35/159 (22%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N ++  L K    +  L L   + + GL PD+ TYS + +  C+ G++      
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454

Query: 69  FGRILRSCFAPNVV-----------------------------------TFTSLIKGLCA 93
           F ++      PN V                                   T+T LI+GL  
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAY 514

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           E  + EA  +  +L + G     +     I  L  T HT
Sbjct: 515 EGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLDGTMHT 553


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 50/389 (12%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNK-HYDTVLSLFKRLNSIGLFPDLYTYSILINCFC-K 58
           MRH     P +  FN +L  L K K HY TVLSL  ++ S G+ PDL+T SILINC+  K
Sbjct: 199 MRHT----PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYYFK 254

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           MG                + PN +T T+LIKGLC   ++ EA      + A G   N +T
Sbjct: 255 MG----------------YEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVT 298

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y  LINGLC+ G T  AL + +++       G +   N V YS +IDGLCK+  V  A  
Sbjct: 299 YGILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTVIDGLCKDKLVIDAYG 352

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L+ +M  + + P VVT+              +A  L  EMV + + PNV + N++++ LC
Sbjct: 353 LYSEMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNILVDALC 398

Query: 239 KNGKMDNASRL--------LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           K+GK+  A  +        L+L  +   +PN  +YNTL+DGFC +G+++   +L   M  
Sbjct: 399 KDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRD 458

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   +  +YN L++  CKN  V++A++L N    +GI+P + TYNTL  GL +  + + 
Sbjct: 459 RGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKD 518

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           A  +F ++        T TY   I+GLC+
Sbjct: 519 AQLIFQDLLIKGYNLPTWTYNIMINGLCL 547



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 22/247 (8%)

Query: 9   PPVSSFNILLGCLAKN-----------KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           P V +FNIL+  L K+           K  D  L+LF  ++     P+  +Y+ LI+ FC
Sbjct: 385 PNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCK---PNTVSYNTLIDGFC 441

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K G++S  + +  ++      PNV+T+ SL+  LC    + +A AL    K  G +P++ 
Sbjct: 442 KSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMH 501

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYNTL++GLC+ G    A  +F+++          +   T TY+I+I+GLC EG +D+A+
Sbjct: 502 TYNTLVDGLCKQGRLKDAQLIFQDLLIKG------YNLPTWTYNIMINGLCLEGLLDEAE 555

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ--PNVVSSNVIMN 235
            L  +M+     P+VVTY ++IH     ++ ++A+ L+ E++ +  +  P  +     + 
Sbjct: 556 TLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRVFRKSPTDIRDGRYLT 615

Query: 236 ELCKNGK 242
            L + GK
Sbjct: 616 TLTQRGK 622


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 186/372 (50%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++  +++  L      D    L + +   G+  +  TYS L++  CK  ++     +
Sbjct: 72  PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 131

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     AP VVT+ S+I G C   R+ EA     ++ A GC P++ITY  LI G C+
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +      L L  E+T         F P+ VTYS +IDGLCK G +  A ++F +M   + 
Sbjct: 192 SRDVGRGLELLGEVTRRG------FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SC 242

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  +TY SLI G+C A D +EA  LL +MVD    P+VV+   +M+  CK G++D+A  
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   + P+  T+ +L+DG C  G++    EL   +   GC    ++YN +++GYC
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAAD 366
           K  +V +A  L  +   +G  P  VTYN L  G     + ++AL+   ++  +G      
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 367 TCTYRTFIDGLC 378
              Y   +D LC
Sbjct: 423 VAMYAIILDALC 434



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 178/352 (50%), Gaps = 11/352 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    + +  D      +++ + G  PD+ TY+ LI  FCK   V  G  +
Sbjct: 142 PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLEL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + R  F P++VT++++I GLC   R+ +A  +F ++    C P  ITYN+LI G CR
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCR 258

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  +M +          P+ VTY+ ++   CK G +D A ELF QM    L
Sbjct: 259 AGDMDEAIRLLGKMVDDK------CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVT+TSL+ G C      +A  LL E+  +G  P + + N +++  CK  ++  A  
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILING 306
           L+         PN  TYN L+ G C  G+ ++  +    + S G  C      Y I+++ 
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            C++   ++A+  Y E+  +G  P   T+ T+   L +  Q ++A +L  EM
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 10/370 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N+++G L +       L +++++N     PD  TY+ L++   K  ++     +   ++ 
Sbjct: 9   NVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           +   P+  T T +++ LC   R+ +A  L  ++   G   N ITY+ L++GLC+      
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 127

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A+ L + M     E G    P  VTY+ II G C+   VD+A     QM  E  +P+++T
Sbjct: 128 AVALVETM----AERGCA--PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           YT+LI GFC + D      LL E+  +G  P++V+ + +++ LCK G++ +A   +D+  
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFE 238

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +    P A TYN+L+ G+C  G ++    L   M    C  D  +Y  L++ +CK   ++
Sbjct: 239 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A  L+ ++    + P VVT+ +L  GL    + E AL+L  E+          TY   +
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 375 DGLCVRPQVR 384
           DG C   QVR
Sbjct: 359 DGYCKANQVR 368



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 137/265 (51%), Gaps = 10/265 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P  + +N +I GLCR G    AL ++++M + +        P+ +TY+ ++ GL K   +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-------PPDFLTYTKLVHGLSKARRL 55

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A ++  +M      P+  T T ++   C  +  ++A+ L+ EM+ +G+  N ++ + +
Sbjct: 56  RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCK  ++D A  L++ M +    P   TYN+++ GFC   +++        M + GC
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +Y  LI G+CK+++V   L L  E+  +G  P +VTY+T+  GL +  +   A+ 
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +F EM     A    TY + I G C
Sbjct: 236 IFEEMS---CAPTAITYNSLIGGYC 257



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 1/230 (0%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P T+ ++++I GLC+ G +  A  ++ QM  +   P+ +TYT L+HG   A    +A  +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L EMV     P+  +  V++  LC   ++D+A  L++ M+   +  NA TY+ L+DG C 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             +++    L  +M   GC     +YN +I G+C+ + V+EA     ++  +G  P ++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           Y  L  G  + R   R L+L  E+       D  TY T IDGLC   ++R
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 231



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 41/277 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+G   +    D  + L  ++      PD+ TY+ L++ FCKMG++   + +
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP-------------- 114
           F +++ +  +P+VVTFTSL+ GLC E R+ +A  L  ++   GC P              
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363

Query: 115 ---------------------NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                N +TYN L+ G CR G T  AL    ++ +  G      
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC---- 419

Query: 154 KPNTVT-YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            P +V  Y+II+D LC++G  D A + + +M      P   T+ +++   C A+   +A 
Sbjct: 420 -PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAH 478

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            LL EM+  G  P   + + +++  C+ G +  A  L
Sbjct: 479 ELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 10/180 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N ++    K         L     S G  P+  TY+IL+   C+ G+      
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 68  IFGRILRSCFAP---NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              + L S   P   +V  +  ++  LC + R  +A   + ++   G  P   T+ T++ 
Sbjct: 408 YLDQ-LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 466

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+      A  L +EM      I     P   T   ++   C+ G + KA EL  +++
Sbjct: 467 ALCKAHQPQQAHELLEEM------IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 197/397 (49%), Gaps = 31/397 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +FNI++  L +   +         +   G+ P++ TY+ +IN +C  G+      IF 
Sbjct: 217 IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFK 276

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+  T+ S I  LC E RI EA+ +  KL   G  PN +TYN LI+G C  G
Sbjct: 277 TMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKG 336

Query: 131 HTIVALNLFKEMTNGNGEIGVVF------------------------------KPNTVTY 160
               A     EM N  G +  VF                              +P+ VTY
Sbjct: 337 DLDKAFAYRDEMMN-RGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTY 395

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +I I+G C+ G   KA  LF +M  +N+ P V TYTSLI  F   N  +EA+    + + 
Sbjct: 396 NIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK 455

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+ P+++  N +++  C NG +D A +LL  M    V P+  T+NTLM G+C   K+  
Sbjct: 456 EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEE 515

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            K+L   M+  G K D  SYN LI+GY K  ++++AL +++E+   G  PT++TYN L  
Sbjct: 516 AKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQ 575

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           G  +I +A+ A +L  EMQ   +  D  TY   I+ +
Sbjct: 576 GYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 190/400 (47%), Gaps = 29/400 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++LL    + +  D  L     +    + P   T + L++   K+ ++ + + ++  ++
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +     ++VTF  +I  LC E +  +A      ++ +G +PNV+TYNT+ING C  G   
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 134 VALNLFKEMTNGN----------------------GEIGVVFK-------PNTVTYSIII 164
            A  +FK M + N                         GV+ K       PN VTY+ +I
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DG C +G +DKA     +M    +  +V TY  LIH         EA+ ++ EM ++GV+
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+VV+ N+ +N  C+ G    A  L D MV+ ++RP   TY +L+D F    +++  +E 
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F      G   D   +N LI+G+C N  ++ A  L  E+    + P  VT+NTL  G   
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            R+ E A KL  EM+   +  D  +Y T I G   R  ++
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 29/336 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L K +  +    +  +L   GL P+  TY+ LI+  C  G +   F  
Sbjct: 285 PDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAY 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      +V T+  LI  L  E RI EA  +  +++  G EP+V+TYN  ING CR
Sbjct: 345 RDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCR 404

Query: 129 TGHTIVALNLFKEMTNGN---------------------GEIGVVFK--------PNTVT 159
            G+   AL+LF EM   N                      E    FK        P+ + 
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +IDG C  G +D+A +L  +M    + P+ VT+ +L+ G+C      EAK LL EM 
Sbjct: 465 FNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK 524

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G++P+ +S N +++   K G M +A  + D M+     P   TYN L+ G+   G+ +
Sbjct: 525 ERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEAD 584

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             +EL   M+S G   DD +Y  +I     N ++ E
Sbjct: 585 HAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 184/378 (48%), Gaps = 17/378 (4%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL----NSIGLFPDLYTYSILINCFCKMGQ 61
           PSP P  SF+IL   L    H  T   +F  L    N + +   L  + +L++ +C+  +
Sbjct: 110 PSPKP--SFHILQPIL----HTTTPTVIFNELSLARNRLNVKTTL-VFDLLLSAYCQFRK 162

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                     +  +   P   T  SL+  L   ++I  A  ++ ++     + +++T+N 
Sbjct: 163 PDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNI 222

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +IN LCR G    A +       G+ E+  V KPN VTY+ +I+G C  G  + A ++F 
Sbjct: 223 MINILCREGKWKKAKDFI-----GHMEVYGV-KPNVVTYNTVINGYCLRGKFEAASKIFK 276

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            MK +NL P+  TY S I   C      EA G+L ++++ G+ PN V+ N +++  C  G
Sbjct: 277 TMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKG 336

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D A    D M+   +  + FTYN L+    L  +I   +++   M   G + D  +YN
Sbjct: 337 DLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYN 396

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I INGYC+    ++ALSL++E+  K I+PTV TY +L     +  +   A + F +    
Sbjct: 397 IQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE 456

Query: 362 DVAADTCTYRTFIDGLCV 379
            +  D   +   IDG CV
Sbjct: 457 GMLPDIIMFNALIDGHCV 474



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+  +C     +EA   L  M +  + P   + N +++ L K  K+  A  + + MV+ +
Sbjct: 153 LLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMN 212

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++ +  T+N +++  C  GK  + K+    ME  G K +  +YN +INGYC   + E A 
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            ++  +  K +KP   TYN+    L + R+ E A  +  ++  + +  +  TY   IDG 
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGC 332

Query: 378 CVRPQVRFTYARR 390
           C +  +   +A R
Sbjct: 333 CNKGDLDKAFAYR 345


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 209/391 (53%), Gaps = 13/391 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L K+++ +    L + + S G  PD  TY+ +++  C+MG+VS     F  +
Sbjct: 82  AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLINGLCRTG 130
               ++P+VV +  L+  L  E ++ EA  LF  +        P++ITYNTLI+G CR  
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A+ LFK++      I   + P+TVTY+ I+ GL ++  +D+A+E+F +M      P
Sbjct: 202 KTDEAMKLFKDV------IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  TY+ ++ G C   +      L  EM ++   P+V+  N +++ LCK  K+D+A ++L
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVL 315

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +    P+  TYN L+DG C T  +++  ELF +M   GC  D  SY++++NG CK 
Sbjct: 316 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V +A  L++ +  + + P VVT+N L  GL +  + + A  L   M  ++V  D  T 
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435

Query: 371 RTFIDGLC----VRPQVR-FTYARRKGNSGN 396
            T + GLC        VR F Y   KG   +
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 205/421 (48%), Gaps = 47/421 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++N LL  L K         LFK ++     + PDL TY+ LI+ FC++ +     
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAM 207

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++   + P+ VT+ S++ GL  +S + EA  +F K+   GC PN  TY+ +++G 
Sbjct: 208 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G+    L L++EMT         F P+ +  + +ID LCK   VD A ++  +M   
Sbjct: 268 CRVGNMARCLELYEEMTEKR------FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+VVTY  L+ G C  N  ++A  L   MVD G  P++VS +V++N LCK  K+ +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L D M++  + P+  T+N LMDG C  GK++  K+L   M       D  +   L++G
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441

Query: 307 YCKNKEVEEALSLYNELPFKG-------------------------------------IK 329
            C++K  +EA+ L+  +  KG                                       
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYAR 389
           P VVTY TL + L E  + ++A+  F +M G+  A D   Y T ++GL  R Q R   A 
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL--RKQGRHIQAD 559

Query: 390 R 390
           R
Sbjct: 560 R 560



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 190/372 (51%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K       L + + +   G+ PD+ TY+I+++  C+ G+V     +
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    + N V + +LI GLC +  I  A  L  ++ + G EP+ ITYNT+++GLCR
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMKYE 186
            G    A   F  M +        + P+ V Y+ ++D L KEG V +A  LF  + M   
Sbjct: 128 MGKVSEAKQFFDSMPSRG------YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+++TY +LI GFC     +EA  L  +++ +G  P+ V+ N I+  L +   MD A
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +   MV     PN  TY+ ++ G C  G + R  EL+  M       D    N +I+ 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK K+V++A  +  E+   G  P VVTYN L  GL +    ++A +LF  M  N  A D
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 367 TCTYRTFIDGLC 378
             +Y   ++GLC
Sbjct: 362 IVSYSVVLNGLC 373



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 8/340 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ TYS +I+  CK G+V+    +   +      P+V T+T ++  LC   ++ EA
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF K+   GC  N + YN LINGLC+  +   A  L +EM +        ++P+ +TY
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG------YEPDNITY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL--IEM 218
           + I+ GLC+ G V +AK+ F  M     +P+VV Y  L+          EA GL   ++M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            D+ V P++++ N +++  C+  K D A +L   ++     P+  TYN+++ G      +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +  +E+F  M   GC  +  +Y+I+++G+C+   +   L LY E+  K   P V+  N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              L + ++ + A K+  EM       D  TY   +DGLC
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC 338



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 177/351 (50%), Gaps = 32/351 (9%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V+  +ILLG LA+  + D    +FK++   G  P+  TYSI+++  C++G ++    
Sbjct: 220 PDTVTYNSILLG-LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLE 278

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  +    F+P+V+   ++I  LC   ++ +A  +  ++   G  P+V+TYN L++GLC
Sbjct: 279 LYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC 338

Query: 128 RTGHTIVALNLFKEM---------------------TNGNGEIGVVFK--------PNTV 158
           +T     A  LF  M                     TN   +  V+F         P+ V
Sbjct: 339 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 398

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T++I++DGLCK G +D+AK+L   M   N+ P+ VT T+L+HG C     +EA  L   M
Sbjct: 399 TFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD--VRPNAFTYNTLMDGFCLTG 276
           V++G   +V+  N+++  LC+ GK+  A      MV+ D    P+  TY TL++     G
Sbjct: 459 VEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++++  + F  M   GC  D  +YN L+NG  K     +A  L   +  KG
Sbjct: 519 RVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 8/309 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F P+VVT++++I GLC   ++ EA  +  ++   G  P+V TY  +++ LCR G    A 
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            LF +M     E G     NTV Y+ +I+GLCK+  +++A +L  +M  +   P+ +TY 
Sbjct: 66  ELFHKMI----ERGC--SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +++ G C     +EAK     M  +G  P+VV+ N +++ L K GK+  A  L   M   
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 257 D--VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           D  V P+  TYNTL+DGFC   K +   +LF  + + G   D  +YN ++ G  +   ++
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA  ++ ++   G  P   TY+ +  G   +    R L+L+ EM     + D       I
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 375 DGLCVRPQV 383
           D LC   +V
Sbjct: 300 DMLCKAKKV 308



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 2/198 (1%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  +   P+VVTY+++I G C      EA  ++ EM ++GV P+V +  +I++ LC+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D A  L   M++     N   YN L++G C    I R  +L   M S G + D+ +YN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF--VEMQG 360
           +++G C+  +V EA   ++ +P +G  P VV YN L   L++  +   A  LF  ++M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 361 NDVAADTCTYRTFIDGLC 378
             VA D  TY T IDG C
Sbjct: 181 RKVAPDLITYNTLIDGFC 198



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G + D  +Y+ +I+G CK  +V EAL +  E+  KG+ P V TY  +   L    +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            + A +LF +M     +A+T  Y   I+GLC    +   Y
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAY 100


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 199/376 (52%), Gaps = 7/376 (1%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R M  SP   +   IL G L + + +D+V   ++ + S GL PD++ YS+L  C  K G 
Sbjct: 190 REMRCSPDSKACLAILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGF 248

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
            S    +   +      PNV  +T  I+ LC E+++ EA  +F  +K  G  PN+ TY+ 
Sbjct: 249 PSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSA 308

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+G C+TG+   A  L+KE+            PN V +  ++DG CK   +  A+ LF+
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVAARSLFV 362

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M    ++PN+  Y  LIHG C + +  EA GLL EM    + P+V +  +++N LC   
Sbjct: 363 HMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEE 422

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           ++  A+RL   M    + P++ TYN+L+ GFC    I +  +L   M S G + +  +++
Sbjct: 423 RLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFS 482

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+GYCK + ++ A+ LY E+  KGI P VVTY TL    F+    + AL+L+ +M   
Sbjct: 483 TLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEA 542

Query: 362 DVAADTCTYRTFIDGL 377
            +  +  T+   +DG 
Sbjct: 543 GIHPNDHTFACLVDGF 558



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 179/403 (44%), Gaps = 84/403 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + I +  L +    +    +F+ +   G+ P+LYTYS +I+ +CK G +   + +
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL +   PNVV F +L+ G C    +V A +LF  +  FG +PN+  YN LI+G C+
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+ + A+ L  EM + N        P+  TY+I+I+GLC E  + +A  LF +MK E +
Sbjct: 386 SGNMLEAMGLLSEMESLN------LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERI 439

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK--------- 239
            P+ VTY SLIHGFC   +  +A  L  EM   GV+PN+++ + +++  CK         
Sbjct: 440 FPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMG 499

Query: 240 --------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF- 272
                                        M  A RL   M++  + PN  T+  L+DGF 
Sbjct: 500 LYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 559

Query: 273 ------------------------------------------CLTGKINRVKELFVSMES 290
                                                     C  G I R    F  M+S
Sbjct: 560 KEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKS 619

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            G   D +SY  ++  + + K + + + L+ ++   GI P ++
Sbjct: 620 GGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLM 662



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 15/340 (4%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           SIG+F      S+LI  F +MG       +  R +R   +P+     +++ GL    R  
Sbjct: 165 SIGVF------SLLIMEFLEMGLFEDALWV-SREMRC--SPDSKACLAILNGLVRRRRFD 215

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
                +  + + G  P+V  Y+ L     + G       L  EMT+    +GV  KPN  
Sbjct: 216 SVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTS----LGV--KPNVY 269

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+I I  LC+E  +++A+++F  MK   + PN+ TY+++I G+C   +  +A GL  E+
Sbjct: 270 IYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEI 329

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +   + PNVV    +++  CK  ++  A  L   MV+  V PN + YN L+ G C +G +
Sbjct: 330 LVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNM 389

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L   MES+    D F+Y ILING C  + + EA  L+  +  + I P+ VTYN+L
Sbjct: 390 LEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSL 449

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HG  +    E+AL L  EM  + V  +  T+ T IDG C
Sbjct: 450 IHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYC 489



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P++     I++GL +    D     +  M    L P+V  Y+ L          ++ + L
Sbjct: 196 PDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKL 255

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L EM   GV+PNV    + + +LC+  KM+ A ++ +LM    V PN +TY+ ++DG+C 
Sbjct: 256 LDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCK 315

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           TG + +   L+  +       +   +  L++G+CK +E+  A SL+  +   G+ P +  
Sbjct: 316 TGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYV 375

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           YN L HG  +      A+ L  EM+  +++ D  TY   I+GLC   ++
Sbjct: 376 YNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERL 424



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 117/240 (48%), Gaps = 2/240 (0%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K  + +  L L   + S G+ P++ T+S LI+ +CK+  +     +
Sbjct: 441 PSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGL 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +      P+VVT+T+LI     E+ + EA  L++ +   G  PN  T+  L++G  +
Sbjct: 501 YFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 560

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKP--NTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            G    A++ + E         +V +     V ++ +I+GLC+ G++ +A   F  MK  
Sbjct: 561 EGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSG 620

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P++ +Y S++          +   L  +M+  G+ PN++ + ++     +NG + +A
Sbjct: 621 GVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 29/225 (12%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGL---LIEMVDQGVQPNVVSS----------------- 230
           ++ +++++IH    A+ +  A+ L   LIE + +  +P  +S                  
Sbjct: 108 DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIG 167

Query: 231 --NVIMNELCKNGKMDNASRLLDLMVQCDVR--PNAFTYNTLMDGFCLTGKINRVKELFV 286
             ++++ E  + G  ++A     L V  ++R  P++     +++G     + + V   + 
Sbjct: 168 VFSLLIMEFLEMGLFEDA-----LWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQ 222

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M S G   D   Y++L     K     +   L +E+   G+KP V  Y      L    
Sbjct: 223 LMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCREN 282

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           + E A K+F  M+ + V  +  TY   IDG C    +R  Y   K
Sbjct: 283 KMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYK 327


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 188/378 (49%), Gaps = 7/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P P S  N LL  L+K    D     FK + + G+   ++TY+I+I+  CK G
Sbjct: 211 MRKFRVFPKPRSC-NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 269

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            + +   +F ++  + F P++VT+ SLI G      + E   +F ++K   C+P+VITYN
Sbjct: 270 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 329

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LIN  C+      A     EM   NG      KPN VTYS  ID  CKEG + +A + F
Sbjct: 330 ALINCFCKFERMPKAFEFLHEM-KANG-----LKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           + M+   L PN  TYTSLI   C A +  EA  L+ E++  G++ NVV+   +++ LC+ 
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+M  A  +   M+   V PN  TY  L+ GF    ++   K++   M+    K D   Y
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             ++ G C    +EEA  L  E+   GI    V Y TL    F+  QA  AL L  EM  
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 361 NDVAADTCTYRTFIDGLC 378
             + A   TY   IDGLC
Sbjct: 564 LGLIATEVTYCALIDGLC 581



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K    D  + +F+++      PD+ TY+ LINCFCK  ++   F  
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNVVT+++ I   C E  + EA   F  ++     PN  TY +LI+  C+
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL L +E+           K N VTY+ ++DGLC+EG + +A+E+F  M    +
Sbjct: 408 AGNLAEALKLVEEILQAG------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+L+HGF  A +   AK +L EM ++ ++P+++    I+  LC   +++ A  
Sbjct: 462 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  + +  +  NA  Y TLMD +  +G+      L   M  +G    + +Y  LI+G C
Sbjct: 522 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLC 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  V+EA+  +  +   G++P V  Y  L  GL +    E A KLF EM    +  D  
Sbjct: 582 KSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 641

Query: 369 TYRTFIDG 376
            Y   IDG
Sbjct: 642 AYTALIDG 649



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 176/366 (48%), Gaps = 6/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++  +    K       +  F  +  + L P+ +TY+ LI+  CK G ++    +
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              IL++    NVVT+T+L+ GLC E R+ EA  +F  +   G  PN  TY  L++G  +
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ KEM           KP+ + Y  I+ GLC E  +++AK L  ++K   +
Sbjct: 478 AKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N N V YT+L+  +  +    EA  LL EM+D G+    V+   +++ LCK+G +  A  
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMH 591

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  ++PN   Y  L+DG C        K+LF  M   G   D  +Y  LI+G  
Sbjct: 592 HFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  ++EAL+L + +   G++  +  Y  L  GL    Q ++A  L  EM G  V  D  
Sbjct: 652 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 711

Query: 369 TYRTFI 374
            Y   I
Sbjct: 712 VYMCLI 717



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 6/318 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++  LL  L +         +F+ + + G+ P+  TY+ L++ F K  ++     I  
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +   C  P+++ + +++ GLC ESR+ EA  L  ++K  G   N + Y TL++   ++G
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L +EM +    +G++     VTY  +IDGLCK G V +A   F +M    L P
Sbjct: 550 QATEALTLLEEMLD----LGLI--ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP 603

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV  YT+L+ G C  N +  AK L  EM+D+G+ P+ ++   +++   K+G +  A  L 
Sbjct: 604 NVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 663

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++  +  +   Y  L+ G   +G++ + + L   M   G   D+  Y  LI  Y   
Sbjct: 664 DRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 723

Query: 311 KEVEEALSLYNELPFKGI 328
            +V+EAL L NE+  +G+
Sbjct: 724 GKVDEALELQNEMAKRGM 741



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 153/313 (48%), Gaps = 6/313 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P    F +L   L     + EA+  F K++ F   P   + N L++ L + G   
Sbjct: 178 RNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGD 237

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           ++   FK+M    G  G+  K +  TY+I+ID LCKEG ++ A+ LF QMK     P++V
Sbjct: 238 LSRKFFKDM----GAAGI--KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 291

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY SLI G       +E   +  +M D    P+V++ N ++N  CK  +M  A   L  M
Sbjct: 292 TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               ++PN  TY+T +D FC  G +    + FV M  +    ++F+Y  LI+  CK   +
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EAL L  E+   GIK  VVTY  L  GL E  + + A ++F  M    VA +  TY   
Sbjct: 412 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471

Query: 374 IDGLCVRPQVRFT 386
           + G     ++ + 
Sbjct: 472 VHGFIKAKEMEYA 484


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-V 67
           P V ++NIL+ C  +        +LF R    GL  D+   +IL+ C C   +      V
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLING 125
           +  R+      P+ +++++++K LC +SR   A  L   +  K+ GC PNV++YNT+I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             R G    A NLF EM     + GVV  P+ VTYS  ID LCK   +DKA+ +  QM  
Sbjct: 237 FFREGEVSKACNLFHEMM----QQGVV--PDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+ VTY  +IHG+     W E  G+  EM  +G+ P++ + N  M+ LCK+GK   
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+   D M     +P+  TY+ L+ G+   G +  +  LF SME  G   D   YNILI+
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            Y K   ++EA+ ++ ++  +G+ P   TY T+      + +   A+  F +M    +  
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 366 DTCTYRTFIDGLCV 379
           DT  Y + I G C+
Sbjct: 471 DTIVYNSLIQGFCM 484



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 203/401 (50%), Gaps = 32/401 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++  +  L K +  D    + +++ S G  PD  TY+ +I+ +  +GQ      +
Sbjct: 260 PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGM 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P++ T  S +  LC   +  EAA  F  + A G +P+++TY+ L++G   
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAA 379

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVFK--------PNTV 158
            G+ +  LNLF  M  GNG                      E  ++F         P+  
Sbjct: 380 EGYVVDMLNLFNSM-EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY  +I    + G +  A + F QM    L P+ + Y SLI GFC   +  +AK L+ EM
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 219 VDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           + +G+ +PN V  N I+N LCK G++  A  + DL++    RP+  T+N+L+DG+ L GK
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +  +M S+G + D  +Y+ L++GYC+N  +++ L L+ E+  KG+KPT +TY  
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + HGLF   +   A K+  EM  +    D  T    + GLC
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 192/369 (52%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++++LL   A   +   +L+LF  +   G+  D   Y+ILI+ + K G +    +I
Sbjct: 365 PDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLI 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+  T+ ++I       R+ +A   F ++ A G +P+ I YN+LI G C 
Sbjct: 425 FTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCM 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ + A  L  EM +       + +PNTV ++ II+ LCKEG V +A+++F  + +   
Sbjct: 485 HGNLVKAKELISEMMSRG-----IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGE 539

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+T+ SLI G+       +A G+L  M+  G++P+VV+ + +++  C+NG++D+   
Sbjct: 540 RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLI 599

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V+P   TY  ++ G    G+    K++   M   G   D  +  I++ G C
Sbjct: 600 LFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA++L+ +L    +K  +   NT+   ++++R+ E A +LF  +    +  +  
Sbjct: 660 RNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAS 719

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 720 TYGVMITNL 728



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 181/388 (46%), Gaps = 30/388 (7%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S +NIL+    K    D  + +F ++   G+ PD +TY  +I  F +MG+++     F +
Sbjct: 403 SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTG 130
           ++     P+ + + SLI+G C    +V+A  L +++ + G   PN + +N++IN LC+ G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 131 HTIVALNLFK---------------EMTNGNGEIG--------------VVFKPNTVTYS 161
             + A ++F                 + +G G +G              V  +P+ VTYS
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            ++DG C+ G +D    LF +M  + + P  +TY  ++HG  +      AK +  EM++ 
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G   ++ +  +I+  LC+N   D A  L   +   +V+ N    NT++D      K    
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            ELF S+ + G   +  +Y ++I    K   VEEA ++++ +   G  P+    N +   
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRV 762

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCT 369
           L E  +  +A     ++ G  ++ +  T
Sbjct: 763 LLEKGEISKAGNYLSKVDGKTISLEAST 790



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 3/200 (1%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA-SR 248
           P V TY  L+   C A+       L    +  G++ +V+ +N+++  LC   + D+A + 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILING 306
           LL  M +  V P+  +Y+T++   C   +  R  +L  +M  +S GC  +  SYN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + +  EV +A +L++E+  +G+ P VVTY++    L + R  ++A  +  +M  N    D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 367 TCTYRTFIDGLCVRPQVRFT 386
             TY   I G  +  Q + T
Sbjct: 297 KVTYNCMIHGYSILGQWKET 316



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 9/290 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+         +    +   + S+G+ PD+ TYS L++ +C+ G++  G ++
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P  +T+  ++ GL  + R V A  +  ++   G   ++ T   ++ GLCR
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LFK++    G + V F  N    + +ID + K    ++A ELF  +    L
Sbjct: 661 NNCDDEAIALFKKL----GAMNVKF--NIAIINTMIDAMYKVRKREEANELFDSISATGL 714

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY  +I          EA  +   M   G  P+    N I+  L + G++  A  
Sbjct: 715 VPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGN 774

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            L  +    +   A T + ++  F   GK    +E   S+ +M    D+F
Sbjct: 775 YLSKVDGKTISLEASTASLMLSLFSRKGK---YREQIKSLPAMYQFFDEF 821


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 204/384 (53%), Gaps = 12/384 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++NIL+   CLA N   D  L  F R+   G  P++ TY+ LI+ +CK+ ++  GF
Sbjct: 203 PNVFTYNILIRGFCLAGN--LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGF 260

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +      PN++++  +I GLC E R+ E + + T++   G   + +TYNTLI G 
Sbjct: 261 ELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGY 320

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G+   AL +  EM            P+ +TY+ +I  +CK G +++A E   QM+  
Sbjct: 321 CKEGNFHQALVMHAEMLRHG------LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN  TYT+L+ GF      NEA  +L EM+D G  P+VV+ N ++N  C  GKM +A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L+ M +  + P+  +Y+T++ GFC +  ++    +   M + G K D  +Y+ LI G
Sbjct: 435 IAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQG 494

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+ +  +EA  L++E+   G+ P   TY  L +        ++A++L  EM    V  D
Sbjct: 495 FCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPD 554

Query: 367 TCTYRTFIDGLCVRPQVRFTYARR 390
             TY   I+GL    Q R   A+R
Sbjct: 555 VVTYSVLINGL--NKQARTREAKR 576



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 204/385 (52%), Gaps = 7/385 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNK-HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           +   H   P V S+N +L    ++K +     ++FK +    + P+++TY+ILI  FC  
Sbjct: 159 LSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLA 218

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G + +    F R+ +    PNVVT+ +LI G C   +I +   L   +   G EPN+I+Y
Sbjct: 219 GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N +INGLCR G       +  EM N  G     +  + VTY+ +I G CKEG   +A  +
Sbjct: 279 NVVINGLCREGRMKEISFVLTEM-NKRG-----YSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M    L+P+V+TYTSLIH  C A + N A   L +M  +G+ PN  +   +++   +
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G M+ A R+L  M+     P+  TYN L++G C+ GK+     +   M+  G   D  S
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ +++G+C++ +V+EAL +  ++  KGIKP  +TY++L  G  E R+ + A  LF EM 
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
              +  D  TY   I+  C+   ++
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQ 537



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 206/400 (51%), Gaps = 45/400 (11%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  + K  + +       ++   GL P+  TY+ L++ F + G ++ 
Sbjct: 339 HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   ++ + F+P+VVT+ +LI G C   ++V+A A+   +K  G  P+V++Y+T+++
Sbjct: 399 AYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLS 458

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G CR+     AL + ++M      +    KP+T+TYS +I G C++    +A +LF +M 
Sbjct: 459 GFCRSYDVDEALRVKRKM------VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              L P+  TYT+LI+ +C   D  +A  L  EMV++GV P+VV+ +V++N L K  +  
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSME 289
            A RLL  +   +  P+  TY+TL++               GFC+ G +    ++F SM 
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF------ 343
               K D  +YN++I+G+C+  ++ +A SLY E+   G     VT   L   L       
Sbjct: 633 EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN 692

Query: 344 -------------EIRQAERALKLFVEM---QGN-DVAAD 366
                        E+ +AE+A K+ VE+   +GN DV  D
Sbjct: 693 ELNSVIANVLRSCELSEAEQA-KVLVEINHREGNMDVVLD 731



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 192/398 (48%), Gaps = 21/398 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+++  L +      +  +   +N  G   D  TY+ LI  +CK G      V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR   +P+V+T+TSLI  +C    +  A     +++  G  PN  TY TL++G  +
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + KEM + NG     F P+ VTY+ +I+G C  G +  A  +   MK + L
Sbjct: 393 KGYMNEAYRVLKEMID-NG-----FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+Y++++ GFC + D +EA  +  +MV +G++P+ ++ + ++   C+  +   A  
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M++  + P+ FTY  L++ +C+ G + +  +L   M   G   D  +Y++LING  
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR---------------QAERALK 353
           K     EA  L  +L ++   P+ VTY+TL      I                    A +
Sbjct: 567 KQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           +F  M   +   D   Y   I G C    +R  Y+  K
Sbjct: 627 VFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYK 664



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 7/297 (2%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VALNLFKEM 142
           F  ++K       I +A ++    +A G  P V++YN +++   R+   I  A N+FKEM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                       PN  TY+I+I G C  G +D A   F +M+ +   PNVVTY +LI G+
Sbjct: 197 LQSQ------VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGY 250

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C     ++   LL  M  +G++PN++S NV++N LC+ G+M   S +L  M +     + 
Sbjct: 251 CKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE 310

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TYNTL+ G+C  G  ++   +   M   G      +Y  LI+  CK   +  A    ++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +  +G+ P   TY TL  G  +      A ++  EM  N  +    TY   I+G C+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 21/269 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+    + +       LF  +  +GL PD +TY+ LIN +C  G +     +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL 542

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN---- 124
              ++     P+VVT++ LI GL  ++R  EA  L  KL      P+ +TY+TLI     
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 125 -----------GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
                      G C  G    A  +F+ M   N       KP+   Y+++I G C+ G +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLEKN------HKPDGTAYNVMIHGHCRGGDI 656

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            KA  L+ +M       + VT  +L+         NE   ++  ++          + V+
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVL 716

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           +    + G MD    +L  M +    PN 
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKDGFLPNG 745


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 193/372 (51%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++         D    L   +  + + PD YTY+ LI   C  G+     V+
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRL---VADMPMEPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR    P+VVT+T L++  C  S   +A  L  +++A GC P++ITYN ++NG+C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+   K + +   E      PNTV+Y+I++ GLC     + A++L  +M  +  
Sbjct: 239 EGRVDDAIEFLKSLPSHGCE------PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVT+  LI   C       A  +L ++   G  PN +S N I++  CK  KMD A  
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            ++LMV     P+  +YNTL+   C  G+++   EL   ++  GC     SYN +I+G  
Sbjct: 353 FVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +EAL L NE+  KG++P ++TY+T+  GL    + E A++ F ++Q   +  +T 
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472

Query: 369 TYRTFIDGLCVR 380
            Y   + GLC R
Sbjct: 473 LYNAILLGLCKR 484



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 181/372 (48%), Gaps = 6/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L         L +   +   G  PD+ TY+IL+   CK       
Sbjct: 151 PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 210

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +     AP+++T+  ++ G+C E R+ +A      L + GCEPN ++YN ++ G
Sbjct: 211 MKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKG 270

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM+         + PN VT++++I  LC+ G V+ A E+  Q+  
Sbjct: 271 LCTAERWEDAEKLMAEMSQKG------YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK 324

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN ++Y  ++H FC     + A   +  MV +G  P++VS N ++  LC+ G++D 
Sbjct: 325 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDA 384

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  +      P   +YNT++DG    GK     EL   M + G + D  +Y+ + +
Sbjct: 385 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISS 444

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +EEA+  + ++   GI+P  V YN +  GL + R+   A+ LF+ M  N    
Sbjct: 445 GLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMP 504

Query: 366 DTCTYRTFIDGL 377
           +  TY   I+GL
Sbjct: 505 NESTYTILIEGL 516



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL    K   Y   + L   + + G  PD+ TY++++N  C+ G+V      
Sbjct: 189 PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  ++KGLC   R  +A  L  ++   G  PNV+T+N LI+ LCR
Sbjct: 249 LKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCR 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +  ++            PN+++Y+ I+   CK+  +D+A      M     
Sbjct: 309 RGLVEPAMEVLDQIPKYG------CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGC 362

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V+Y +L+   C   + + A  LL ++ D+G  P ++S N +++ L K GK   A  
Sbjct: 363 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ MV   ++P+  TY+T+  G C   +I      F  ++ MG + +   YN ++ G C
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC 482

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K +E   A+ L+  +   G  P   TY  L  GL      + A +L  E+
Sbjct: 483 KRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 161/355 (45%), Gaps = 66/355 (18%)

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            +LIK LCA  R  EA  +        CEP+V+ YN ++ G C TG    A  L  +M  
Sbjct: 98  AALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM 152

Query: 145 ---------------GNGEIG---VVFK--------PNTVTYSI---------------- 162
                          G G  G   VV          P+ VTY+I                
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212

Query: 163 -------------------IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                              +++G+C+EG VD A E    +      PN V+Y  ++ G C
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A  W +A+ L+ EM  +G  PNVV+ N++++ LC+ G ++ A  +LD + +    PN+ 
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           +YN ++  FC   K++R       M S GC  D  SYN L+   C+  EV+ A+ L ++L
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             KG  P +++YNT+  GL +  + + AL+L  EM    +  D  TY T   GLC
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 6/288 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+NI+L  L   + ++    L   ++  G  P++ T+++LI+  C+ G V  
Sbjct: 255 HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEP 314

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  +I +    PN +++  ++   C + ++  A A    + + GC P++++YNTL+ 
Sbjct: 315 AMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLT 374

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LCR G    A+ L  ++ +          P  ++Y+ +IDGL K G   +A EL  +M 
Sbjct: 375 ALCRGGEVDAAVELLHQLKDKG------CTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+++TY+++  G C  +   EA     ++ D G++PN V  N I+  LCK  +  
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETH 488

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           NA  L   M+     PN  TY  L++G    G +   +EL   + S G
Sbjct: 489 NAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 16/201 (7%)

Query: 189 NPNVVTYTSL----IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS--NVIMNELCKNGK 242
           +PN V + ++    + G     D  EA  L+  M   G++P+        ++ +LC +G+
Sbjct: 52  SPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGR 109

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A R+L     C+  P+   YN ++ G+C+TG+++  + L   M     + D ++YN 
Sbjct: 110 TAEARRVL---AACE--PDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNT 161

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI G C       AL + +++  +G  P VVTY  L     +    ++A+KL  EM+   
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
            A D  TY   ++G+C   +V
Sbjct: 222 CAPDIITYNVVVNGICQEGRV 242



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 55/124 (44%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ +   L +    +  +  F ++  +G+ P+   Y+ ++   CK  +      +
Sbjct: 434 PDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   PN  T+T LI+GL  E  + EA  L  +L + G     +     I  L  
Sbjct: 494 FIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLDG 553

Query: 129 TGHT 132
           T HT
Sbjct: 554 TTHT 557


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 205/384 (53%), Gaps = 7/384 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K +       L + +   GL P+L +Y+++IN  C+ GQ+     I
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +  + P+ VTF +LI G C      +A  L  ++   G  PNV+TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+    +M +          PN  TY+ +IDG  ++GF+ +A ++  +M     
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P ++TY +LI+G C      +A GLL EM+++G  P+VVS + I++  C+N +++ A +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   + P+  TY++L+ G C   ++  V +LF  M S+G   D+ +Y  LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++++AL L++E+  KG  P +VTYN L +G  +  + + A +L +++   +   +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 369 TYRTFIDGLCVRPQVRFTYARRKG 392
           TY T ID  C   + +   A  KG
Sbjct: 590 TYNTLIDN-CNNLEFKSALALMKG 612



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 194/366 (53%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFVIFGRI 72
           F++++   A+    +  LS+     S G  P + +Y+ +++   +  Q V +   IF  +
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + S  +PNV T+  LI+G C    +      F +++  GC PNV+TYNT+I+  C+    
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L + M            PN ++Y+++I+GLC+EG + +  E+  +M      P+ 
Sbjct: 255 GEAFKLLRLMALKG------LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+ +LI+G+C+  ++++A  L  EMV  G+ PNVV+   ++N +CK G ++ A   LD 
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + PN  TY TL+DGF   G + +  ++   M   G      +YN LING+C    
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  L  E+  +G  P VV+Y+T+  G    ++ E+A +L VEM    ++ D  TY +
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 373 FIDGLC 378
            I GLC
Sbjct: 489 LIQGLC 494



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 180/350 (51%), Gaps = 21/350 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  + K  + +  +    ++   GL P+  TY+ LI+ F + G +   + I
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ + F P ++T+ +LI G C   R+ +A+ L  ++   G  P+V++Y+T+I+G CR
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM      +     P+  TYS +I GLCK+  + +  +LF +M    L
Sbjct: 461 NQELEKAFQLKVEM------VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYTSLI+ +C   D ++A  L  EM+ +G  P++V+ NV++N   K  +   A R
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSMESMGC 293
           LL  ++  +  PN  TYNTL+D               GFC+ G +N    +  SM   G 
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           K ++  YN++I+G+ K   +E+A +LY E+   G  P  VT   L   L+
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 177/384 (46%), Gaps = 21/384 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+       ++   L L   +   GL P++ TY+ LIN  CK G ++     
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN  T+T+LI G   +  + +A  +  ++   G  P +ITYN LING C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L +EM      I   F P+ V+YS II G C+   ++KA +L ++M  + +
Sbjct: 426 LGRMEDASGLLQEM------IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY+SLI G C      E   L  EM+  G+ P+ V+   ++N  C  G +D A R
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN--- 305
           L D M+Q    P+  TYN L++GF    +    K L + +       ++ +YN LI+   
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 306 ------------GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                       G+C    + EA  +   +  KG K     YN + HG  ++   E+A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 354 LFVEMQGNDVAADTCTYRTFIDGL 377
           L+ EM  +  A  + T       L
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSL 683



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 8/295 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI-VALNLFKEMTN 144
           L+   CA   ++  A     L K++G  P V++YN +++ + RT  ++ +A  +FKEM  
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV- 195

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
              E GV   PN  TY+I+I G C  G ++     F +M+     PNVVTY ++I  +C 
Sbjct: 196 ---ESGV--SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                EA  LL  M  +G+ PN++S NV++N LC+ G+M   S +L+ M +    P+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           +NTL++G+C  G  ++   L   M   G   +  +Y  LIN  CK   +  A+   +++ 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +G+ P   TY TL  G  +    ++A ++  EM  N       TY   I+G C+
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 21/292 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+         +    L + +   G  PD+ +YS +I+ FC+  ++   F +
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    +P+V T++SLI+GLC + R+ E   LF ++ + G  P+ +TY +LIN  C 
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCI 530

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L  EM      I   F P+ VTY+++I+G  K+    +AK L L++ YE  
Sbjct: 531 EGDLDKALRLHDEM------IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 189 NPNVVTYTSLI---------------HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            PN +TY +LI                GFC     NEA  +L  M+ +G + N    NVI
Sbjct: 585 VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVI 644

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   K G ++ A  L   M+     P++ T   L       GK   + +L 
Sbjct: 645 IHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 25/260 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV- 67
           P V S++ ++    +N+  +    L   + + G+ PD+ TYS LI   CK  Q  LG V 
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK--QRRLGEVC 503

Query: 68  -IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P+ VT+TSLI   C E  + +A  L  ++   G  P+++TYN LING 
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID---------------GLCKEG 171
            +   T  A  L  ++            PN +TY+ +ID               G C +G
Sbjct: 564 NKQSRTKEAKRLLLKLLYEES------VPNEITYNTLIDNCNNLEFKSALALMKGFCMKG 617

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +++A  +   M  +    N   Y  +IHG     +  +A  L  EM+  G  P+ V+  
Sbjct: 618 LMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIM 677

Query: 232 VIMNELCKNGKMDNASRLLD 251
            +   L   GK    ++LLD
Sbjct: 678 ALAKSLYHEGKEVELNQLLD 697



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 3/208 (1%)

Query: 174 DKAKELF--LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
           +  ++LF  L+  Y     +   +  ++      N  N+A  ++      G  P V+S N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 232 VIMNELCKNGK-MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            I++ + +  + +  A  +   MV+  V PN +TYN L+ GFC  G +      F  ME 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER 231

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  +  +YN +I+ YCK +++ EA  L   +  KG+ P +++YN + +GL    Q + 
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE 291

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++  EM       D  T+ T I+G C
Sbjct: 292 TSEILEEMSKRRYVPDRVTFNTLINGYC 319



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE-LFVSMESMGCKHDDFSYN 301
           ++ A  +++L       P   +YN ++D    T +  ++ E +F  M   G   + ++YN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI G+C    +E  L  + E+   G  P VVTYNT+     ++R+   A KL   M   
Sbjct: 208 ILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 362 DVAADTCTYRTFIDGLCVRPQVRFT 386
            +  +  +Y   I+GLC   Q++ T
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKET 292



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 21/179 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+         D  L L   +   G  PD+ TY++LIN F K  +      
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 68  IFGRILRSCFAPNVVTFTSLI---------------KGLCAESRIVEAAALFTKLKAFGC 112
           +  ++L     PN +T+ +LI               KG C +  + EA  +   +   G 
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           + N   YN +I+G  + G+   A NL+KEM +        F P++VT   +   L  EG
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG------FAPHSVTIMALAKSLYHEG 687


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 13/379 (3%)

Query: 3   HMH---PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           HMH   P  P   ++N ++  L +       L     +   G  PD YT++ LI  +C+ 
Sbjct: 142 HMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRT 201

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
            QV +   +F ++    FA +VV++ +LI+GLC   RI EA  LF ++     +P++  Y
Sbjct: 202 NQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMY 257

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             L+ GLC        L + + M     E+G  ++P+T  Y+ ++D  C+E    +A+E+
Sbjct: 258 AALVKGLCNAERGEEGLLMLRRMK----ELG--WRPSTRAYAAVVDFRCRERKAKEAEEM 311

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M  + L P VVT T++I+ +C     ++A  +L  M  +G +PNV + N ++   C 
Sbjct: 312 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 371

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GK+  A  LL+ M  C V P+A TYN L+ G C+ G I     L   ME  G   D ++
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LIN  CK+   ++A SL++ L  +GIKP  VT+N+L +GL +  +A+ A K   +M 
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 DT TY +FI+ LC
Sbjct: 492 SAGCTPDTYTYSSFIEHLC 510



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 183/416 (43%), Gaps = 50/416 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++    + +       + + +   GL P + T + +IN +CK G++S    +
Sbjct: 287 PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV 346

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + LR C  PNV T+ +L++G C E ++ +A  L  K++A G  P+ +TYN LI G C
Sbjct: 347 LELMKLRGC-KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQC 405

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVF------------------------------KPNT 157
             GH   A  L + M  G+G I   +                              KPN 
Sbjct: 406 IDGHIESAFRLLRLM-EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VT++ +I+GLCK G  D A +   +M      P+  TY+S I   C      E    + E
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+ + V+P+ V+  +++++L K       +R    MV     P+  TY T M  +C+ G+
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N  + + + M   G   D  +YN L++G+    + + A+S+  ++      P   TY  
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644

Query: 338 LFHGLFEIRQAERALK-----------------LFVEMQGNDVAADTCTYRTFIDG 376
           L   L  +R  E  L                  LF  M+ N+   ++ TY + ++G
Sbjct: 645 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 700



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 58/421 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+     + H ++   L + +   GL  D YTY+ LIN  CK G+      +
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTF SLI GLC   +   A     K+ + GC P+  TY++ I  LC+
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +   L+   EM   +       KP+TV Y+I+I  L KE         + +M     
Sbjct: 512 MKGSQEGLSFIGEMLQKD------VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+VVTYT+ +  +C     NEA+ +L+EM   GV  + ++ N +M+     G+ D+A  
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 249 LL----------------------------------------------------DLMVQC 256
           +L                                                    D+M + 
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 685

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           +  PN+ TY+++++GF   G+      L   M+      ++  Y  L+  +CK+K   +A
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 745

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L   +   G  P +++Y  L  GL    Q ++A ++F+  +  D + D   ++  IDG
Sbjct: 746 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 805

Query: 377 L 377
           L
Sbjct: 806 L 806



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 158/389 (40%), Gaps = 23/389 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L K+   D      +++ S G  PD YTYS  I   CKM     G   
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 521

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +L+    P+ V +T +I  L  E      A  + ++ + GC P+V+TY T +   C 
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A N+  EM+      GV    +T+ Y+ ++DG    G  D A  +  QM     
Sbjct: 582 EGRLNEAENVLMEMSKN----GVTV--DTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 635

Query: 189 NPNVVTYTSLIH-----------------GFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            PN  TY  L+                  G   A +  +  GL   M      PN  + +
Sbjct: 636 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 695

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            I+    ++G+ + A+ L+ LM +  +  N   Y  L+  FC + +      L  SM   
Sbjct: 696 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 755

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G      SY  L++G     + ++A  ++    +K   P  + +  +  GL +   ++ +
Sbjct: 756 GFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 815

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            ++ + ++  +      TY    + L  R
Sbjct: 816 REMIIMLERMNCRPSHQTYAMLTEELPDR 844


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/371 (35%), Positives = 200/371 (53%), Gaps = 10/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L  LA+N+    V  LF  L      P+++T++I+I+  CK G++     
Sbjct: 166 PPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARA 221

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+     +P+VVT+ SLI G      + E   L ++++  GC  +V+TYN LIN   
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFS 281

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A + F EM       GVV   N VT+S  +D  CKEG V +A +LF QM+   
Sbjct: 282 KFGRMEKAYSYFGEMKRQ----GVV--ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN  TYTSL+ G C A   ++A  LL EMV QG+ PNVV+  V+++ LCK GK+  A 
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L LM +  V+ N   Y TL+ G  +     R  +L   M++ G + D   Y  LI G 
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+++V+EA SL +++   G++P  V Y T+   LF+  +   A+ L  ++  +    + 
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515

Query: 368 CTYRTFIDGLC 378
            TY   IDGLC
Sbjct: 516 VTYCALIDGLC 526



 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 194/380 (51%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    + V  L   +   G   D+ TY+ LINCF K G++   +  
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG + R     NVVTF++ +   C E  + EA  LF +++  G  PN  TY +L++G C+
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  EM +     G+V  PN VTY++++DGLCKEG V +A  +   M+   +
Sbjct: 353 AGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV 406

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + YT+LIHG    N+   A  LL +M ++G++ +V     ++  LCK+ K+D A  
Sbjct: 407 KANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKS 466

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M  C +RPN   Y T+MD     GK +    L   +   G + +  +Y  LI+G C
Sbjct: 467 LLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLC 526

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA+S +N++   G+ P V  Y  L  G  +I    +A+ L  EM    ++ D  
Sbjct: 527 KAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKV 586

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            Y + IDG   +  ++  +A
Sbjct: 587 VYTSLIDGYMKQANLQDAFA 606



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 6/364 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F+  +    K       + LF ++   G+ P+ +TY+ L++  CK G++    V+  
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PNVVT+T ++ GLC E ++ EA  + + ++  G + N + Y TLI+G     
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           ++  AL+L  +M N   E+ V        Y  +I GLCK+  VD+AK L  +M    L P
Sbjct: 425 NSERALDLLNQMKNKGMELDVSL------YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP 478

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V YT+++     A   +EA  LL +++D G QPNVV+   +++ LCK G +  A    
Sbjct: 479 NTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHF 538

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + PN   Y  L+DGFC  G +N+   L   M   G   D   Y  LI+GY K 
Sbjct: 539 NKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQ 598

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +++A +L  ++   G++  +  Y     G   +   + A  +  EM G  +  D   Y
Sbjct: 599 ANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVY 658

Query: 371 RTFI 374
              I
Sbjct: 659 NCLI 662



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 41/350 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K    D  + L   +   GL P++ TY+++++  CK G+V+    +
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397

Query: 69  FGRILRSCFAPNVVTFTSLIKG-----------------------------------LCA 93
              + R     N + +T+LI G                                   LC 
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + ++ EA +L  K+   G  PN + Y T+++ L + G    A+ L  ++ +        F
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG------F 511

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +PN VTY  +IDGLCK G + +A   F +M+   L+PNV  YT+LI GFC     N+A  
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+ EM+D+G+  + V    +++   K   + +A  L   M++  ++ + + Y   + GFC
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
               +   + +   M   G   D   YN LI  Y K   +EEA SL NE+
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 8/276 (2%)

Query: 24  NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
           N + +  L L  ++ + G+  D+  Y  LI   CK  +V     +  ++      PN V 
Sbjct: 423 NNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVI 482

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +T+++  L    +  EA AL  K+   G +PNV+TY  LI+GLC+ G    A++ F +M 
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
               E+G    PN   Y+ +IDG CK G ++KA  L  +M  + ++ + V YTSLI G+ 
Sbjct: 543 ----ELG--LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              +  +A  L  +M++ G+Q ++      ++  C    M  A  +L  M+   + P+  
Sbjct: 597 KQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 656

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDD 297
            YN L+  +   G +     L   MES+   C  DD
Sbjct: 657 VYNCLIRKYQKLGNMEEASSLQNEMESVLSSCTEDD 692



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 190 PNVV-TYTSLI--HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           P+VV T  SL+  HG       ++A   L  +    V PN  + N I+  L +N +    
Sbjct: 134 PSVVDTLLSLLADHGL-----LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLV 188

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            RL DL+      PN FT+N ++D  C  G++   + LFV M++MGC  D  +YN LI+G
Sbjct: 189 RRLFDLLPV----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDG 244

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K  ++EE   L +E+   G    VVTYN L +   +  + E+A   F EM+   V A+
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304

Query: 367 TCTYRTFIDGLC 378
             T+ TF+D  C
Sbjct: 305 VVTFSTFVDAFC 316



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 96/194 (49%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV T+  +I   C   +  EA+ L + M   G  P+VV+ N +++   K G ++   +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           +  M +     +  TYN L++ F   G++ +    F  M+  G   +  +++  ++ +CK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              V+EA+ L+ ++  +G+ P   TY +L  G  +  + + A+ L  EM    +  +  T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 370 YRTFIDGLCVRPQV 383
           Y   +DGLC   +V
Sbjct: 378 YTVMVDGLCKEGKV 391


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 205/384 (53%), Gaps = 7/384 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K +       L + +   GL P+L +Y+++IN  C+ GQ+     I
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +  + P+ VTF +LI G C      +A  L  ++   G  PNV+TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+    +M +          PN  TY+ +IDG  ++GF+ +A ++  +M     
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P ++TY +LI+G C      +A GLL EM+++G  P+VVS + I++  C+N +++ A +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   + P+  TY++L+ G C   ++  V +LF  M S+G   D+ +Y  LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++++AL L++E+  KG  P +VTYN L +G  +  + + A +L +++   +   +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 369 TYRTFIDGLCVRPQVRFTYARRKG 392
           TY T ID  C   + +   A  KG
Sbjct: 590 TYNTLIDN-CNNLEFKSALALMKG 612



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 194/366 (53%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFVIFGRI 72
           F++++   A+    +  LS+     S G  P + +Y+ +++   +  Q V +   IF  +
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + S  +PNV T+  LI+G C    +      F +++  GC PNV+TYNT+I+  C+    
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L + M            PN ++Y+++I+GLC+EG + +  E+  +M      P+ 
Sbjct: 255 GEAFKLLRLMALKG------LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+ +LI+G+C+  ++++A  L  EMV  G+ PNVV+   ++N +CK G ++ A   LD 
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + PN  TY TL+DGF   G + +  ++   M   G      +YN LING+C    
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  L  E+  +G  P VV+Y+T+  G    ++ E+A +L VEM    ++ D  TY +
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 373 FIDGLC 378
            I GLC
Sbjct: 489 LIQGLC 494



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 180/350 (51%), Gaps = 21/350 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  + K  + +  +    ++   GL P+  TY+ LI+ F + G +   + I
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ + F P ++T+ +LI G C   R+ +A+ L  ++   G  P+V++Y+T+I+G CR
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM      +     P+  TYS +I GLCK+  + +  +LF +M    L
Sbjct: 461 NQELEKAFQLKVEM------VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYTSLI+ +C   D ++A  L  EM+ +G  P++V+ NV++N   K  +   A R
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 249 LLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSMESMGC 293
           LL  ++  +  PN  TYNTL+D               GFC+ G +N    +  SM   G 
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           K ++  YN++I+G+ K   +E+A +LY E+   G  P  VT   L   L+
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 177/384 (46%), Gaps = 21/384 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+       ++   L L   +   GL P++ TY+ LIN  CK G ++     
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN  T+T+LI G   +  + +A  +  ++   G  P +ITYN LING C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L +EM      I   F P+ V+YS II G C+   ++KA +L ++M  + +
Sbjct: 426 LGRMEDASGLLQEM------IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY+SLI G C      E   L  EM+  G+ P+ V+   ++N  C  G +D A R
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN--- 305
           L D M+Q    P+  TYN L++GF    +    K L + +       ++ +YN LI+   
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 306 ------------GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                       G+C    + EA  +   +  KG K     YN + HG  ++   E+A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 354 LFVEMQGNDVAADTCTYRTFIDGL 377
           L+ EM  +  A  + T       L
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSL 683



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 8/295 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI-VALNLFKEMTN 144
           L+   CA   ++  A     L K++G  P V++YN +++ + RT  ++ +A  +FKEM  
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV- 195

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
              E GV   PN  TY+I+I G C  G ++     F +M+     PNVVTY ++I  +C 
Sbjct: 196 ---ESGV--SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                EA  LL  M  +G+ PN++S NV++N LC+ G+M   S +L+ M +    P+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           +NTL++G+C  G  ++   L   M   G   +  +Y  LIN  CK   +  A+   +++ 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +G+ P   TY TL  G  +    ++A ++  EM  N       TY   I+G C+
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 21/292 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+         +    L + +   G  PD+ +YS +I+ FC+  ++   F +
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    +P+V T++SLI+GLC + R+ E   LF ++ + G  P+ +TY +LIN  C 
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCI 530

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L  EM      I   F P+ VTY+++I+G  K+    +AK L L++ YE  
Sbjct: 531 EGDLDKALRLHDEM------IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 189 NPNVVTYTSLI---------------HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            PN +TY +LI                GFC     NEA  +L  M+ +G + N    NVI
Sbjct: 585 VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVI 644

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   K G ++ A  L   M+     P++ T   L       GK   + +L 
Sbjct: 645 IHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 25/260 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV- 67
           P V S++ ++    +N+  +    L   + + G+ PD+ TYS LI   CK  Q  LG V 
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK--QRRLGEVC 503

Query: 68  -IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P+ VT+TSLI   C E  + +A  L  ++   G  P+++TYN LING 
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID---------------GLCKEG 171
            +   T  A  L  ++            PN +TY+ +ID               G C +G
Sbjct: 564 NKQSRTKEAKRLLLKLLYEES------VPNEITYNTLIDNCNNLEFKSALALMKGFCMKG 617

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +++A  +   M  +    N   Y  +IHG     +  +A  L  EM+  G  P+ V+  
Sbjct: 618 LMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIM 677

Query: 232 VIMNELCKNGKMDNASRLLD 251
            +   L   GK    ++LLD
Sbjct: 678 ALAKSLYHEGKEVELNQLLD 697



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 3/208 (1%)

Query: 174 DKAKELF--LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
           +  ++LF  L+  Y     +   +  ++      N  N+A  ++      G  P V+S N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 232 VIMNELCKNGK-MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            I++ + +  + +  A  +   MV+  V PN +TYN L+ GFC  G +      F  ME 
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER 231

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  +  +YN +I+ YCK +++ EA  L   +  KG+ P +++YN + +GL    Q + 
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE 291

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++  EM       D  T+ T I+G C
Sbjct: 292 TSEILEEMSKRRYVPDRVTFNTLINGYC 319



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE-LFVSMESMGCKHDDFSYN 301
           ++ A  +++L       P   +YN ++D    T +  ++ E +F  M   G   + ++YN
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN 207

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI G+C    +E  L  + E+   G  P VVTYNT+     ++R+   A KL   M   
Sbjct: 208 ILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 362 DVAADTCTYRTFIDGLCVRPQVRFT 386
            +  +  +Y   I+GLC   Q++ T
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKET 292



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 21/179 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+         D  L L   +   G  PD+ TY++LIN F K  +      
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574

Query: 68  IFGRILRSCFAPNVVTFTSLI---------------KGLCAESRIVEAAALFTKLKAFGC 112
           +  ++L     PN +T+ +LI               KG C +  + EA  +   +   G 
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           + N   YN +I+G  + G+   A NL+KEM +        F P++VT   +   L  EG
Sbjct: 635 KLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG------FAPHSVTIMALAKSLYHEG 687


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+I++NC CK GQ+     I
Sbjct: 288 PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ TF +LI  LC+ +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF+EM +          P+ VTY+ +ID LC  G + KA +L  +M+    
Sbjct: 408 VGDPQLALRLFEEMKSSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGC 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTY ++I G C      EA+ +  +M  QG+  N ++ N +++ LCK+ ++D+A++
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING C
Sbjct: 522 LISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + AL L   +  KG++ T   YN +   LF       A+ LF EM       D  
Sbjct: 582 KAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAF 641

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 642 TYKIVFRGLC 651



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 195/376 (51%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L    +P  VT   LI G C   R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL +   M     +      P+  TY+I+++ LCK G +++AK +  QM     
Sbjct: 303 NGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC 356

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+ +LI   C  N   EA  L  ++  +G+ P+V + N+++N LCK G    A R
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYNTL+D  C  GK+ +  +L   MES GC     +YN +I+G C
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI    +T+NTL  GL + ++ + A +L  +M    +  +  
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 537 TYNSILTHYCKQGDIK 552



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 186/379 (49%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FN L+  L      +  L L +++   GL PD+YT++ILIN  CK+G   L   +
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+ +LI  LC+  ++ +A  L  ++++ GC  + +TYNT+I+GLC+
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M             N +T++ +IDGLCK+  +D A +L  QM  E L
Sbjct: 478 KMRIEEAEEVFDQMDLQG------ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGL 531

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 532 QPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALK 591

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    +R     YN ++              LF  M  +G   D F+Y I+  G C
Sbjct: 592 LLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLC 651

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    + EA     E+  KG  P   ++  L  GL  +   +   RA+++ +E   +  +
Sbjct: 652 RGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDS 711

Query: 362 DVAA--DTCTYRTFIDGLC 378
           DV+A       R F D L 
Sbjct: 712 DVSAIRGYLKIRKFYDALA 730



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 186/384 (48%), Gaps = 7/384 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M  SP  V+  N+L+    K    +  L   ++  + G  PD  TY+  +N  C+ G
Sbjct: 246 MLEMGCSPTKVT-VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     +   +++    P+V T+  ++  LC   ++ EA  +  ++   GC P++ T+N
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI  LC       AL+L +++T           P+  T++I+I+ LCK G    A  LF
Sbjct: 365 TLIVALCSGNRLEEALDLARQVTLKG------LSPDVYTFNILINALCKVGDPQLALRLF 418

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +MK     P+ VTY +LI   C      +A  LL EM   G   + V+ N I++ LCK 
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            +++ A  + D M    +  NA T+NTL+DG C   +I+   +L   M S G + ++ +Y
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N ++  YCK  ++++A  +   +   G +  VVTY TL +GL +  + + ALKL   M+ 
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
             + A    Y   I  L  R   R
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTR 622



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 179/357 (50%), Gaps = 7/357 (1%)

Query: 28  DTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           D V  +  +L+ + G+  D   Y+ L+N   +  ++ L   ++  +      P+VVTF +
Sbjct: 131 DAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNT 190

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+K LC   ++  A  +  ++ + G  P+  T+ TL+ G    G    AL +   M    
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML--- 247

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E+G    P  VT +++I+G CK G V+ A     Q       P+ +TY + ++G C   
Sbjct: 248 -EMGC--SPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A  ++  MV +G  P+V + N+++N LCKNG+++ A  +L+ MV+    P+  T+N
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+   C   ++    +L   +   G   D +++NILIN  CK  + + AL L+ E+   
Sbjct: 365 TLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSS 424

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  P  VTYNTL   L  + +  +AL L  EM+       T TY T IDGLC + ++
Sbjct: 425 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 207/390 (53%), Gaps = 10/390 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNS---IGLFPDLYTYSILINCFC 57
           M + +P P  V  FN +L  +AK + YD V++L+KR+ +   I + PDLYT +IL+NCFC
Sbjct: 1   MAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFC 59

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +  Q S      G++++    P++VT +SL+ G C  + I +A  +  +++  G + +V+
Sbjct: 60  RCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVV 119

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
               LI+ LC+    + AL + K M +          PN VTYS +I GLCK G +  A+
Sbjct: 120 VDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAE 173

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
               +M  + +NPNV+T+++LI  +      ++   +   M+   + PNV + + ++  L
Sbjct: 174 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 233

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C + ++D A ++LDLM+     PN  TY+TL +GF  + +++   +L   M   G   + 
Sbjct: 234 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 293

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            S N LI GY +  +++ AL ++  +   G+ P + +YN +  GLF   + E+AL  F  
Sbjct: 294 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 353

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           MQ      D  TY   I G+C    V+  Y
Sbjct: 354 MQKTRNDLDIITYTIMIHGMCKACMVKEAY 383



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 6/289 (2%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           IL+  L KN+     L + KR+   G+ P++ TYS LI   CK G+++        +   
Sbjct: 123 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 182

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              PNV+TF++LI       ++ +  +++  +     +PNV TY++LI GLC       A
Sbjct: 183 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 242

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + +   M +          PN VTYS + +G  K   VD   +L   M    +  N V+ 
Sbjct: 243 IKMLDLMISKGCT------PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 296

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LI G+  A   + A G+   M   G+ PN+ S N+++  L  NG+++ A    + M +
Sbjct: 297 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 356

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                +  TY  ++ G C    +    +LF  ++    + D  +Y I+I
Sbjct: 357 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 7/253 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+   AK      V S++K +  + + P+++TYS LI   C   +V     +
Sbjct: 186 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 245

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+++L  G    SR+ +   L   +   G   N ++ NTLI G  +
Sbjct: 246 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 305

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL +F  MT+ NG I     PN  +Y+I++ GL   G V+KA   F  M+    
Sbjct: 306 AGKIDLALGVFGYMTS-NGLI-----PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 359

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +++TYT +IHG C A    EA  L  ++  + V+P+  +  +++ EL + G M   + 
Sbjct: 360 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-MRTEAD 418

Query: 249 LLDLMVQCDVRPN 261
            L+   Q  VR N
Sbjct: 419 ALNRFYQKHVRQN 431


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 196/394 (49%), Gaps = 29/394 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FNI++  L K             + ++G+ P++ TY+ +I+  C  G+     VIF  +
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH- 131
                 P+  T+ S I GLC E R+ EA+ L  K+   G  PN +TYN LI+G C  G  
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337

Query: 132 -----------------TIVALNLFKEMTNGNGEIGVV-----------FKPNTVTYSII 163
                            ++V  NLF       G +G               P+ VT++I+
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I+G C+ G   +A  L  +M  + + P +VTYTSLI+     N   EA  L  ++  +G+
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+++  N +++  C NG +D A +LL  M    V P+  TYNTLM G+C  GK+   ++
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M+  G K D  SYN LI+GY K  ++++A  + +E+   G  PT++TYN L  GL 
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + ++ E A +L  EM    +  D  TY + I+ +
Sbjct: 578 KNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 76/435 (17%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + K  +  L  F  +   G  P++ T + +++ F K+ +  + +V++  + 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R     ++ TF  +I  LC E ++ +A      ++  G +PNV+TYNT+I+G C  G   
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M +   E      P+  TY+  I GLCKEG +++A  L  +M    L PN V
Sbjct: 269 RARVIFQTMKDKGLE------PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 194 TYTSLIHGFCHANDWNEA---------KGLLI--------------------------EM 218
           TY +LI G+C+  D ++A         KG++                           EM
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY------------- 265
            ++G+ P+ V+ N+++N  C+ G    A  LLD MV   ++P   TY             
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 266 ----------------------NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                                 N L+DG C  G I+R  +L   M++M    D+ +YN L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + GYC+  +VEEA  L +E+  +GIKP  ++YNTL  G  +    + A ++  EM     
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562

Query: 364 AADTCTYRTFIDGLC 378
                TY   I GLC
Sbjct: 563 DPTILTYNALIQGLC 577



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 6/331 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +L+  +C++ + +     F  I    F PN+ T   ++      +R   A  L+ ++ 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
                 ++ T+N +IN LC+ G     L   KE       +GV  KPN VTY+ II G C
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEG----KLKKAKEFIGHMETLGV--KPNVVTYNTIIHGHC 262

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
             G   +A+ +F  MK + L P+  TY S I G C      EA GL+ +M++ G+ PN V
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +++  C  G +D A    D M+   +  +  TYN  +    + G++     +   M
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   D  ++NILINGYC+  + + A  L +E+  KGI+PT+VTY +L + L +  + 
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           + A  LF ++Q   +  D   +   IDG C 
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCA 473



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 109/221 (49%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T+ + +++   C+    ++A E F  +K +   PN+ T   ++  F   N    A  L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM    ++ ++ + N+++N LCK GK+  A   +  M    V+PN  TYNT++ G CL G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K  R + +F +M+  G + D ++YN  I+G CK   +EEA  L  ++   G+ P  VTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L  G       ++A     EM    + A   TY  FI  L
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 96/193 (49%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+  +C     NEA      + ++G  PN+ + N +++   K  +   A  L   M + +
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +R + +T+N +++  C  GK+ + KE    ME++G K +  +YN +I+G+C   + + A 
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            ++  +  KG++P   TYN+   GL +  + E A  L  +M    +  +  TY   IDG 
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGY 331

Query: 378 CVRPQVRFTYARR 390
           C +  +   YA R
Sbjct: 332 CNKGDLDKAYAYR 344


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 190/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL  L+K+ +   V   F  +   G+ P ++TY+++I+  CK G +     +
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++     +P+VVT+ SLI G      + E A+LF ++K  GC P++ITYN LIN  C+
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   F EM N NG      KPN VTYS +ID  CKEG +  A +LF+ M+   L
Sbjct: 372 FEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGL 425

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI   C A +  EA  LL +M+  GV+ N+V+   +++ LCK G+M  A  
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 485

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M++  + PN   Y  L+ G+    ++    ++   M     K D   Y  +I G+C
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 545

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++EE   +  E+  +GI    V   T+    F+  ++  AL  F EMQ   V A   
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605

Query: 369 TYRTFIDGLC 378
           TY   IDGLC
Sbjct: 606 TYCVLIDGLC 615



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 191/376 (50%), Gaps = 7/376 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR M  SP  V ++N L+    K    + V SLF  +  +G  PD+ TY+ LINC+CK  
Sbjct: 315 MREMGLSPD-VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 373

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F  F  +  +   PNVVT+++LI   C E  +  A  LF  ++  G  PN  TY 
Sbjct: 374 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYT 433

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+  C+ G+   A  L  +M       GV  K N VTY+ ++DGLCK G + +A+E+F
Sbjct: 434 SLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVF 487

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + ++PN   YT+L+HG+  A    +A  +L +M +  ++P+++    I+   C  
Sbjct: 488 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 547

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            K++    +L+ M    +  N     T++D +   GK +     F  M+ +G +    +Y
Sbjct: 548 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 607

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            +LI+G CK   VE A+  +  +   G++P V  Y +L  GL +    E A KLF EMQ 
Sbjct: 608 CVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667

Query: 361 NDVAADTCTYRTFIDG 376
             +  D   +   IDG
Sbjct: 668 RGMTPDITAFTALIDG 683



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K       + LF  +   GL P+ +TY+ LI+  CK G ++  + +
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L++    N+VT+T+L+ GLC   R++EA  +F  +   G  PN   Y  L++G  +
Sbjct: 452 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ + K+MT  N       KP+ + Y  II G C +  +++ K +  +MK   +
Sbjct: 512 AERMEDAMKILKQMTECN------IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N V  T++I  +  A   ++A     EM D GV+  +V+  V+++ LCK G ++ A  
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+   ++PN   Y +L+DG C    I   K+LF  M+  G   D  ++  LI+G  
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+  ++EAL L + +    I+  +  Y +L  G  +  +  +A K F EM
Sbjct: 686 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 735



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 145/278 (52%), Gaps = 6/278 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA   F++++ F   P   + N L++ L ++G+  +    F +M      IG    P+  
Sbjct: 237 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVF 290

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+++ID LCKEG ++ ++ LF+QM+   L+P+VVTY SLI G+       E   L  EM
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            D G  P++++ N ++N  CK  KM  A      M    ++PN  TY+TL+D FC  G +
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               +LFV M   G   ++F+Y  LI+  CK   + EA  L N++   G+K  +VTY  L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             GL +  +   A ++F  M  + ++ +   Y   + G
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 6/339 (1%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            + +L + F ++G +      F R+      P   +   L+  L            F  +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              G  P+V TYN +I+ LC+ G    +  LF +M     E+G+   P+ VTY+ +IDG 
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR----EMGL--SPDVVTYNSLIDGY 334

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K G +++   LF +MK     P+++TY  LI+ +C       A     EM + G++PNV
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ + +++  CK G M  A +L   M +  + PN FTY +L+D  C  G +    +L   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G K +  +Y  L++G CK   + EA  ++  +   GI P    Y  L HG  +  +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            E A+K+  +M   ++  D   Y + I G C + ++  T
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEET 553



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 160/318 (50%), Gaps = 6/318 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  LL  L K         +F+ +   G+ P+   Y+ L++ + K  ++     I  
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+++ + S+I G C++ ++ E   +  ++K+ G   N +   T+I+   + G
Sbjct: 524 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG 583

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            +  ALN F+EM     ++GV  +   VTY ++IDGLCK G V+ A + F +M    L P
Sbjct: 584 KSSDALNFFQEMQ----DVGV--EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV  YTSLI G C  N    AK L  EM  +G+ P++ +   +++   K+G +  A  L+
Sbjct: 638 NVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 697

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  +  +   Y +L+ GF   G++++ ++ F  M   G   ++     L+  Y K 
Sbjct: 698 SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKR 757

Query: 311 KEVEEALSLYNELPFKGI 328
            +++EA+ L NE+   G+
Sbjct: 758 GQLDEAIELKNEMERMGL 775


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 205/373 (54%), Gaps = 13/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FN +L  L +        +L  ++   G+  + +T +I I   C+ G++     +
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R + +  AP+VVT+ +L++GLC +S++ EAA    ++   GC P+  TYNT+I+G C+
Sbjct: 269 VER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           +G    A  L K+          VFK   P+ VTY  +I+GLC EG +++A ELF + + 
Sbjct: 328 SGMLQEATELLKD---------AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           ++L P++V Y SL+ G C       A  ++ EMV++G  P++ + N+I+N LCK G + +
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +++  +     P+ FT+NTL+DG+C   K++   +L   M + G   D  +YN ++N
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK  + +E    + E+  KG +P  +TYN L     +I Q E A  + V M  + +  
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558

Query: 366 DTCTYRTFIDGLC 378
           D  ++ T I G C
Sbjct: 559 DAVSFNTLIHGFC 571



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 192/380 (50%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K+           R+ + G  PD +TY+ +I+ +CK G +     +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+ VT+ SLI GLCAE  I  A  LF + +A   +P+++ YN+L+ GLCR
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM     E G    P+  TY+III+GLCK G +  A  +      +  
Sbjct: 398 QGLILHALQVMNEMV----EEGC--HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C     + A  L+  M   G+ P+V++ N ++N LCK GK    + 
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M+    RPNA TYN L++ FC   ++     + V M   G   D  S+N LI+G+C
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N +++ A  L+ +L  KG   T  T+N L          + A K+F EM       D  
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TYR  +DGLC    V   YA
Sbjct: 632 TYRILVDGLCKAANVDRAYA 651



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 183/384 (47%), Gaps = 18/384 (4%)

Query: 3   HMHPS----PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPD----LYTYSILIN 54
           H  PS       + ++  L+  L      D V +      S  L PD    LY  SI   
Sbjct: 23  HAEPSSELTASTIPAYRALIRELVSAGRLDDVDAALASARS-HLAPDSLQPLYVASI--Q 79

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            + + G++      F R+      P    + +++  L   +   +A  ++ ++ A G  P
Sbjct: 80  AYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAP 139

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           +  T+   +   C TG   VAL L + ++    E G   KP    Y  ++ GL   G   
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLS----ERGCDAKP--AAYCTVVRGLYAHGHGY 193

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            A+ LF +M   ++ P+V T+ +++H  C   D  E+  LL +++ +G+  N  + N+ +
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC++G+++ A  L++ M    V P+  TYNTLM G C   K+    +    M + GC 
Sbjct: 254 RGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            DDF+YN +I+GYCK+  ++EA  L  +  FKG  P  VTY +L +GL      ERAL+L
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F E Q  D+  D   Y + + GLC
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLC 396



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 7/357 (1%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNV 81
           A+       +  F+R++     P    Y+ +++             ++ R+L +  AP+ 
Sbjct: 82  ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
            T T  +K  C   R   A  L   L   GC+     Y T++ GL   GH   A +LF E
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M      +G    P+  T++ ++  LC++G V ++  L  ++    ++ N  T    I G
Sbjct: 202 M------LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRG 255

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C      EA   L+E +   V P+VV+ N +M  LCK+ K+  A++ L  M+     P+
Sbjct: 256 LCEDGRLEEAVA-LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            FTYNT++DG+C +G +    EL       G   D  +Y  LING C   ++E AL L+N
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN 374

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E   K +KP +V YN+L  GL        AL++  EM       D  TY   I+GLC
Sbjct: 375 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 163/325 (50%), Gaps = 6/325 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L +       L +   +   G  PD++TY+I+IN  CKMG +S   V+
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV 442

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF +LI G C   ++  A  L  ++  +G  P+VITYN+++NGLC+
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        F+EM      I    +PN +TY+I+I+  CK   +++A  + ++M  + L
Sbjct: 503 AGKAKEVNETFEEM------ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V++ +LIHGFC   D + A  L  ++ ++G      + N+++        M  A +
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+    +P+ +TY  L+DG C    ++R       M S G      ++  ++N   
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
            N  V EA+++ + +   G+ P VV
Sbjct: 677 MNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 41/276 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D+ L L +R+ + G+ PD+ TY+ ++N  CK G+       
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN +T+  LI+  C  +++ EA+ +  ++   G  P+ +++NTLI+G CR
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572

Query: 129 TGHTIVALNLFKEMTNGN----------------------------GE-IGVVFKPNTVT 159
            G    A  LF+++                                GE I   +KP+  T
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y I++DGLCK   VD+A     +M  +   P++ T+  +++     +  +EA  ++  MV
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692

Query: 220 DQGVQPNVVSS------------NVIMNELCKNGKM 243
             GV P VV +             +++ EL K G +
Sbjct: 693 RMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHI 728



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 7/240 (2%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y   I    + G +  A + F +M      P    Y +++    +A   ++A  + + M+
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGK 277
             GV P+  +  V +   C  G+   A RLL  + +  CD +P A  Y T++ G    G 
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAA--YCTVVRGLYAHGH 191

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
               + LF  M       D  ++N +++  C+  +V E+ +L  ++  +G+     T N 
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR--FTYARRKGNSG 395
              GL E  + E A+ L VE  G  VA D  TY T + GLC   +V+    Y  R  N G
Sbjct: 252 WIRGLCEDGRLEEAVAL-VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG 310



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 7/196 (3%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLI----EMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  Y +LI     A   ++    L      +    +QP  V+S   +    + G++  A 
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVAS---IQAYARAGRLRAAV 91

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
              + M      P A  YN +MD        ++  +++V M + G   D  ++ + +  +
Sbjct: 92  DAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF 151

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C       AL L   L  +G       Y T+  GL+       A  LF EM G DV  D 
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211

Query: 368 CTYRTFIDGLCVRPQV 383
            T+   +  LC +  V
Sbjct: 212 ATFNNVLHALCQKGDV 227


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL   AK    D V   FK +   G  P ++TY+I+I+C CK G V     +
Sbjct: 93  PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+ S+I G     R+ +    F ++K   CEP+VITYN LIN  C+
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 212

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   + L  ++EM  GNG      KPN V+YS ++D  CKEG + +A + ++ M+   L
Sbjct: 213 FGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 266

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI   C   + ++A  L  EM+  GV+ NVV+   +++ LC   +M  A  
Sbjct: 267 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 326

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V PN  +YN L+ GF     ++R  EL   ++  G K D   Y   I G C
Sbjct: 327 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 386

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++E A  + NE+   GIK   + Y TL    F+       L L  EM+  D+     
Sbjct: 387 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 446

Query: 369 TYRTFIDGLC 378
           T+   IDGLC
Sbjct: 447 TFCVLIDGLC 456



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L      +  +  F ++    +FP   + + L++ F K+G+       
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   P V T+  +I  +C E  +  A  LF ++K  G  P+ +TYN++I+G  +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     +  F+EM +      +  +P+ +TY+ +I+  CK G +    E + +MK   L
Sbjct: 178 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y++L+  FC      +A    ++M   G+ PN  +   +++  CK G + +A R
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+Q  V  N  TY  L+DG C   ++   +ELF  M++ G   +  SYN LI+G+ 
Sbjct: 292 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K ++ AL L NEL  +GIKP ++ Y T   GL  + + E A  +  EM+   + A++ 
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411

Query: 369 TYRTFIDG 376
            Y T +D 
Sbjct: 412 IYTTLMDA 419



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 201/405 (49%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    D  +  F+ +  +   PD+ TY+ LINCFCK G++ +G   
Sbjct: 163 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 222

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  +   PNVV++++L+   C E  + +A   +  ++  G  PN  TY +LI+  C+
Sbjct: 223 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L  EM     ++GV +  N VTY+ +IDGLC    + +A+ELF +M    +
Sbjct: 283 IGNLSDAFRLGNEML----QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 336

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ +Y +LIHGF  A + + A  LL E+  +G++P+++     +  LC   K++ A  
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 396

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK-------INRVKELFVSMESMG--------C 293
           +++ M +C ++ N+  Y TLMD +  +G        ++ +KEL + +  +         C
Sbjct: 397 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 456

Query: 294 KH--------------DDFS-------YNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           K+              +DF        +  +I+G CK+ +VE A +L+ ++  KG+ P  
Sbjct: 457 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 516

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             Y +L  G F+      AL L  +M    +  D   Y + + GL
Sbjct: 517 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 41/340 (12%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P    F +L   L     + EA   F+K+K F   P   + N L++   + G T 
Sbjct: 53  RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                FK+M      IG   +P   TY+I+ID +CKEG V+ A+ LF +MK+  L P+ V
Sbjct: 113 DVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 166

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY S+I GF      ++      EM D   +P+V++ N ++N  CK GK+         M
Sbjct: 167 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 226

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKHDDF 298
               ++PN  +Y+TL+D FC  G + +  + +V M  +G               CK  + 
Sbjct: 227 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 286

Query: 299 S--------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           S                    Y  LI+G C  + ++EA  L+ ++   G+ P + +YN L
Sbjct: 287 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HG  + +  +RAL+L  E++G  +  D   Y TFI GLC
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 386



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 174/382 (45%), Gaps = 42/382 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K       +  +  +  +GL P+ YTY+ LI+  CK+G +S  F +
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+     NVVT+T+LI GLC   R+ EA  LF K+   G  PN+ +YN LI+G  +
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL L  E+  G G      KP+ + Y   I GLC    ++ AK +  +MK   +
Sbjct: 353 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMV----------------------------- 219
             N + YT+L+  +  + +  E   LL EM                              
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 466

Query: 220 -------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                  D G+Q N      +++ LCK+ +++ A+ L + MVQ  + P+   Y +LMDG 
Sbjct: 467 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 526

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G +     L   M  +G K D  +Y  L+ G     ++++A S   E+  +GI P  
Sbjct: 527 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 586

Query: 333 VTYNTLFHGLFEIRQAERALKL 354
           V   ++    +E+   + A++L
Sbjct: 587 VLCISVLKKHYELGCIDEAVEL 608



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 40/282 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++S+N L+    K K+ D  L L   L   G+ PDL  Y   I   C + ++    V+
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N + +T+L+          E   L  ++K    E  V+T+  LI+GLC+
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++ F  ++N  G      + N   ++ +IDGLCK+  V+ A  LF QM  + L
Sbjct: 458 NKLVSKAVDYFNRISNDFG-----LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 512

Query: 189 NPN-----------------------------------VVTYTSLIHGFCHANDWNEAKG 213
            P+                                   ++ YTSL+ G  H N   +A+ 
Sbjct: 513 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 572

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            L EM+ +G+ P+ V    ++ +  + G +D A  L   +++
Sbjct: 573 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 194/380 (51%), Gaps = 12/380 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      D    LF+ + S  + PD++TY+ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R   APNVVT+T+LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN + Y +LI GFC     +EA+ +  +M ++G  PNV + + +++ L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D A ++L  M++    PN   Y  ++DG C  GK +    L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K  +V++ L L  ++  KG  P  VTY  L +        + A +L  E
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M+          YR  I+G 
Sbjct: 837 MKQTYWPKHMAGYRKVIEGF 856



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 22/379 (5%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L  CL     ++   S+ + + S G  PD  TYS +I   C   +V   F++F  +  + 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V T+T LI   C    + +A   F ++   GC PNV+TY  LI+   +      A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK----------YE 186
            LF EM    G I     PN VTY+ +IDG CK G ++KA +++ +M+          Y 
Sbjct: 571 ELF-EMMLSEGCI-----PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624

Query: 187 NLN------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++      PN+ TY +L+ G C A+   EA+ LL  M  +G +PN +  + +++  CK 
Sbjct: 625 KIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKV 684

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  +   M +    PN +TY++L+D      +++   ++   M    C  +   Y
Sbjct: 685 GKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIY 744

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +I+G CK  + +EA  L + +  KG  P VVTY  +  G  +  + ++ L+L  +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 361 NDVAADTCTYRTFIDGLCV 379
              A +  TYR  I+  C 
Sbjct: 805 KGCAPNFVTYRVLINHCCA 823



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 203/432 (46%), Gaps = 73/432 (16%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSI----GLFPDLYTYSILINCFCKMGQVS 63
           P V ++ ILL GCL K +     L   KR+ S+    G +P    ++ LI+ +C+ G  S
Sbjct: 332 PNVVTYRILLCGCLRKRQ-----LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYS 386

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG------------ 111
             + +  ++      P  V +  LI G+C   ++     L    KA+G            
Sbjct: 387 YAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 112 ---------CE--------------------PNVITYNTLINGLCRTGHTIVALNLFKEM 142
                    C                     P+  TY+ +I  LC       A  LF+EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + +    VV  P+  TY+I+ID  CK G + +A++ F +M  +   PNVVTYT+LIH +
Sbjct: 507 KSNH----VV--PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL------------L 250
             A   + A  L   M+ +G  PNVV+   +++  CK+G+++ A ++            +
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV 620

Query: 251 DLMVQCD---VR-PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           D+  + D   +R PN FTY  L+DG C   K+   ++L   M   GC+ +   Y+ LI+G
Sbjct: 621 DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA  ++ ++  +G  P V TY++L   LF+ ++ + ALK+   M  N  A +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 367 TCTYRTFIDGLC 378
              Y   IDGLC
Sbjct: 741 VIIYTEMIDGLC 752



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 188/405 (46%), Gaps = 65/405 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K +   +   LF+ + S G  P++ TY+ LI+  CK GQ+     I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+  +                   PN+ T+ +L+ GLC   ++ EA  L   +   GC
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGE--------IGVVFK--------- 154
           EPN I Y+ LI+G C+ G    A  +F +M+  G G         I  +FK         
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN + Y+ +IDGLCK G  D+A  L   M+ +  +PNVVTYT++I GF 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++   L+ +M  +G  PN V+  V++N  C  G +D+A +LLD M Q     +  
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF------SYNILINGYCKNKEVEEAL 317
            Y  +++GF      NR  E  +S+  +    ++       +Y ILI+ +CK   +E AL
Sbjct: 848 GYRKVIEGF------NR--EFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 899

Query: 318 SLYNEL----PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            L+  +     +      +  Y++L   L    + ++A +L+ +M
Sbjct: 900 ELHKXMSSCTSYSAADKDL--YSSLIESLSLASKVDKAFELYADM 942



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 187/421 (44%), Gaps = 51/421 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    DT   + + ++  G   D YT    ++  CK G+      +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              I +  F  + V +T +I GLC  S   EA    +++++  C PNV+TY         
Sbjct: 290 ---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+LI+  CR+G    A  L K+M    G+ G   
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCGC-- 400

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           +P  V Y+I+I G+C          ++ A++ + +M   ++  N V  ++L    C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ +G  P+  + + ++  LC   K+DNA  L + M    V P+ FTY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+D FC  G + + ++ F  M   GC  +  +Y  LI+ Y K +++  A  L+  +  +G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             P VVTY  L  G  +  Q E+A +++  M+GN    D   Y    DG    P + FTY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI-FTY 639

Query: 388 A 388
            
Sbjct: 640 G 640



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 6/198 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++    K    D  L L +++ + G  P+  TY +LIN  C  G +     +
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++ +  ++  +  +I+G   E   + +  L  ++      P +  Y  LI+  C+
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNRE--FIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL L K M++           +   YS +I+ L     VDKA EL+  M     
Sbjct: 892 AGRLELALELHKXMSSCTSYSAA----DKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 189 NPNVVTYTSLIHGFCHAN 206
            P +  +  L+ G    N
Sbjct: 948 IPELSIFFYLVKGLIRIN 965



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 9/202 (4%)

Query: 182 QMKYENLNPNVVTYTSLIHGF-CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           Q+ Y +  P    Y +L+    C  ND    +  L E+ D+  +      NV++ + C+N
Sbjct: 155 QIGYGHTGP---VYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRN 210

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G  + A   L  +     +P+  TYN L+  F    +++    +   M   G   D ++ 
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
              ++  CK     EAL+L  +  F   K   V Y  +  GL E    E A+     M+ 
Sbjct: 271 GCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327

Query: 361 NDVAADTCTYRTFIDGLCVRPQ 382
           +    +  TYR  + G C+R +
Sbjct: 328 SSCIPNVVTYRILLCG-CLRKR 348


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 194/380 (51%), Gaps = 12/380 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      D    LF+ + S  + PD++TY+ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R   APNVVT+T+LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN + Y +LI GFC     +EA+ +  +M ++G  PNV + + +++ L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D A ++L  M++    PN   Y  ++DG C  GK +    L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K  +V++ L L  ++  KG  P  VTY  L +        + A +L  E
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M+          YR  I+G 
Sbjct: 837 MKQTYWPKHMAGYRKVIEGF 856



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 22/379 (5%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L  CL     ++   S+ + + S G  PD  TYS +I   C   +V   F++F  +  + 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V T+T LI   C    + +A   F ++   GC PNV+TY  LI+   +      A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK----------YE 186
            LF EM    G I     PN VTY+ +IDG CK G ++KA +++ +M+          Y 
Sbjct: 571 ELF-EMMLSEGCI-----PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624

Query: 187 NLN------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++      PN+ TY +L+ G C A+   EA+ LL  M  +G +PN +  + +++  CK 
Sbjct: 625 KIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKV 684

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  +   M +    PN +TY++L+D      +++   ++   M    C  +   Y
Sbjct: 685 GKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIY 744

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +I+G CK  + +EA  L + +  KG  P VVTY  +  G  +  + ++ L+L  +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 361 NDVAADTCTYRTFIDGLCV 379
              A +  TYR  I+  C 
Sbjct: 805 KGCAPNFVTYRVLINHCCA 823



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 203/432 (46%), Gaps = 73/432 (16%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSI----GLFPDLYTYSILINCFCKMGQVS 63
           P V ++ ILL GCL K +     L   KR+ S+    G +P    ++ LI+ +C+ G  S
Sbjct: 332 PNVVTYRILLCGCLRKRQ-----LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYS 386

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG------------ 111
             + +  ++      P  V +  LI G+C   ++     L    KA+G            
Sbjct: 387 YAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 112 ---------CE--------------------PNVITYNTLINGLCRTGHTIVALNLFKEM 142
                    C                     P+  TY+ +I  LC       A  LF+EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + +    VV  P+  TY+I+ID  CK G + +A++ F +M  +   PNVVTYT+LIH +
Sbjct: 507 KSNH----VV--PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL------------L 250
             A   + A  L   M+ +G  PNVV+   +++  CK+G+++ A ++            +
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV 620

Query: 251 DLMVQCD---VR-PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           D+  + D   +R PN FTY  L+DG C   K+   ++L   M   GC+ +   Y+ LI+G
Sbjct: 621 DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA  ++ ++  +G  P V TY++L   LF+ ++ + ALK+   M  N  A +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 367 TCTYRTFIDGLC 378
              Y   IDGLC
Sbjct: 741 VIIYTEMIDGLC 752



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 185/426 (43%), Gaps = 80/426 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K +   +   LF+ + S G  P++ TY+ LI+  CK GQ+     I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+  +                   PN+ T+ +L+ GLC   ++ EA  L   +   GC
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGE--------IGVVFK--------- 154
           EPN I Y+ LI+G C+ G    A  +F +M+  G G         I  +FK         
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN + Y+ +IDGLCK G  D+A  L   M+ +  +PNVVTYT++I GF 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC------- 256
            A   ++   L+ +M  +G  PN V+  V++N  C  G +D+A +LLD M Q        
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 257 ---------------------DVRPNAF-----TYNTLMDGFCLTGKINRVKELFVSMES 290
                                ++  N        Y  L+D FC  G++    EL   M S
Sbjct: 848 GYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS 907

Query: 291 MG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
                  D   Y+ LI       +V++A  LY ++  +G  P +  +  L  GL  I + 
Sbjct: 908 CTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRW 967

Query: 349 ERALKL 354
           E AL+L
Sbjct: 968 EEALQL 973



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 187/421 (44%), Gaps = 51/421 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    DT   + + ++  G   D YT    ++  CK G+      +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              I +  F  + V +T +I GLC  S   EA    +++++  C PNV+TY         
Sbjct: 290 ---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+LI+  CR+G    A  L K+M    G+ G   
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCGC-- 400

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           +P  V Y+I+I G+C          ++ A++ + +M   ++  N V  ++L    C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ +G  P+  + + ++  LC   K+DNA  L + M    V P+ FTY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+D FC  G + + ++ F  M   GC  +  +Y  LI+ Y K +++  A  L+  +  +G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             P VVTY  L  G  +  Q E+A +++  M+GN    D   Y    DG    P + FTY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI-FTY 639

Query: 388 A 388
            
Sbjct: 640 G 640



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 9/202 (4%)

Query: 182 QMKYENLNPNVVTYTSLIHGF-CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           Q+ Y +  P    Y +L+    C  ND    +  L E+ D+  +      NV++ + C+N
Sbjct: 155 QIGYGHTGP---VYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRN 210

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G  + A   L  +     +P+  TYN L+  F    +++    +   M   G   D ++ 
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
              ++  CK     EAL+L  +  F   K   V Y  +  GL E    E A+     M+ 
Sbjct: 271 GCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327

Query: 361 NDVAADTCTYRTFIDGLCVRPQ 382
           +    +  TYR  + G C+R +
Sbjct: 328 SSCIPNVVTYRILLCG-CLRKR 348


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 202/371 (54%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K K  D      + +   GL P+L T++++IN  C+ G++     +
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R  + P+ VT+ +L+ G C E    +A  L  ++   G  PNV+TY +LIN +C+
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G+   A+  F +M   G         PN  TY+ II+G  ++G +D+A  +  +M    
Sbjct: 136 AGNLNRAMEFFDQMHVRG-------LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++VTY +LI+G C      EA GLL +MV +GV P+VVS + I++   +N ++D A 
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++   M+   V P+A TY++L+ G C   ++    ++F  M ++    D+F+Y  LIN Y
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  ++ +AL L++E+  KG  P  VTYN L +GL +  +++ A +L +++  +D     
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368

Query: 368 CTYRTFIDGLC 378
            TY T I+  C
Sbjct: 369 VTYNTLIENCC 379



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 165/315 (52%), Gaps = 6/315 (1%)

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +G   F  + R+   PNVVT+ ++I G C   R  EA      +   G EPN+IT+N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLCR G       +  EM+         + P+ VTY+ +++G CKEG   +A  L  +M
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKG------YVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+PNVVTYTSLI+  C A + N A     +M  +G+ PN  +   I+N   + G +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A R+L+ M +    P+  TYN L++G C+ G++     L   M   G   D  SY+ +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+ +N+E++ A  +  E+  K + P  VTY++L  GL E R+   A  +F EM    +
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 364 AADTCTYRTFIDGLC 378
             D  TY T I+  C
Sbjct: 295 PPDEFTYTTLINAYC 309



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 181/370 (48%), Gaps = 28/370 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  + K  + +  +  F +++  GL P+  TY+ +IN F + G +   + +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + RS F P++VT+ +LI G C   R+ EA  L   +   G  P+V++Y+T+I+G  R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  EM      IG    P+ VTYS +I GLC++  + +A ++F +M    L
Sbjct: 241 NQELDRAFQMKVEM------IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+LI+ +C   D N+A  L  EM+ +G  P+ V+ NV++N L K  +   A R
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI-LINGY 307
           LL  +   D  P+A TYNTL++  C                     + +F   + L+ G+
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIENCC---------------------NIEFKSAVALVKGF 393

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    ++EA  ++  +  K  KP    YN + HG   I    +A KL+ EM   D    T
Sbjct: 394 CMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHT 453

Query: 368 CTYRTFIDGL 377
            T    +  L
Sbjct: 454 VTVLALVKAL 463


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 194/379 (51%), Gaps = 12/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      D    LF+ + S  + PD++TY+ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R   APNVVT+T+LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN + Y +LI GFC     +EA+ +  +M ++G  PNV + + +++ L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D A ++L  M++    PN   Y  ++DG C  GK +    L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K  +V++ L L  ++  KG  P  VTY  L +        + A +L  E
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 358 MQGNDVAADTCTYRTFIDG 376
           M+          YR  I+G
Sbjct: 837 MKQTYWPKHMAGYRKVIEG 855



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 22/379 (5%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L  CL     ++   S+ + + S G  PD  TYS +I   C   +V   F++F  +  + 
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V T+T LI   C    + +A   F ++   GC PNV+TY  LI+   +      A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK----------YE 186
            LF EM    G I     PN VTY+ +IDG CK G ++KA +++ +M+          Y 
Sbjct: 571 ELF-EMMLSEGCI-----PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624

Query: 187 NLN------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++      PN+ TY +L+ G C A+   EA+ LL  M  +G +PN +  + +++  CK 
Sbjct: 625 KIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKV 684

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  +   M +    PN +TY++L+D      +++   ++   M    C  +   Y
Sbjct: 685 GKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIY 744

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +I+G CK  + +EA  L + +  KG  P VVTY  +  G  +  + ++ L+L  +M  
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804

Query: 361 NDVAADTCTYRTFIDGLCV 379
              A +  TYR  I+  C 
Sbjct: 805 KGCAPNFVTYRVLINHCCA 823



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 203/432 (46%), Gaps = 73/432 (16%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSI----GLFPDLYTYSILINCFCKMGQVS 63
           P V ++ ILL GCL K +     L   KR+ S+    G +P    ++ LI+ +C+ G  S
Sbjct: 332 PNVVTYRILLCGCLRKRQ-----LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYS 386

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG------------ 111
             + +  ++      P  V +  LI G+C   ++     L    KA+G            
Sbjct: 387 YAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 112 ---------CE--------------------PNVITYNTLINGLCRTGHTIVALNLFKEM 142
                    C                     P+  TY+ +I  LC       A  LF+EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + +    VV  P+  TY+I+ID  CK G + +A++ F +M  +   PNVVTYT+LIH +
Sbjct: 507 KSNH----VV--PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL------------L 250
             A   + A  L   M+ +G  PNVV+   +++  CK+G+++ A ++            +
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV 620

Query: 251 DLMVQCD---VR-PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           D+  + D   +R PN FTY  L+DG C   K+   ++L   M   GC+ +   Y+ LI+G
Sbjct: 621 DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA  ++ ++  +G  P V TY++L   LF+ ++ + ALK+   M  N  A +
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 367 TCTYRTFIDGLC 378
              Y   IDGLC
Sbjct: 741 VIIYTEMIDGLC 752



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 185/426 (43%), Gaps = 80/426 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K +   +   LF+ + S G  P++ TY+ LI+  CK GQ+     I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+  +                   PN+ T+ +L+ GLC   ++ EA  L   +   GC
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGE--------IGVVFK--------- 154
           EPN I Y+ LI+G C+ G    A  +F +M+  G G         I  +FK         
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN + Y+ +IDGLCK G  D+A  L   M+ +  +PNVVTYT++I GF 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC------- 256
            A   ++   L+ +M  +G  PN V+  V++N  C  G +D+A +LLD M Q        
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 257 ---------------------DVRPNAF-----TYNTLMDGFCLTGKINRVKELFVSMES 290
                                ++  N        Y  L+D FC  G++    EL   M S
Sbjct: 848 GYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS 907

Query: 291 MG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
                  D   Y+ LI       +V++A  LY ++  +G  P +  +  L  GL  I + 
Sbjct: 908 CTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRW 967

Query: 349 ERALKL 354
           E AL+L
Sbjct: 968 EEALQL 973



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 187/421 (44%), Gaps = 51/421 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    DT   + + ++  G   D YT    ++  CK G+      +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              I +  F  + V +T +I GLC  S   EA    +++++  C PNV+TY         
Sbjct: 290 ---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+LI+  CR+G    A  L K+M    G+ G   
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCGC-- 400

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           +P  V Y+I+I G+C          ++ A++ + +M   ++  N V  ++L    C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ +G  P+  + + ++  LC   K+DNA  L + M    V P+ FTY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+D FC  G + + ++ F  M   GC  +  +Y  LI+ Y K +++  A  L+  +  +G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             P VVTY  L  G  +  Q E+A +++  M+GN    D   Y    DG    P + FTY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI-FTY 639

Query: 388 A 388
            
Sbjct: 640 G 640



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 4/152 (2%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           NV++ + C+NG  + A   L  +     +P+  TYN L+  F    +++    +   M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D ++    ++  CK     EAL+L  +  F   K   V Y  +  GL E    E 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           A+     M+ +    +  TYR  + G C+R +
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCG-CLRKR 348


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 182/335 (54%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ LIN FCKM ++     +  R+    F+P+ VT+  +I  LC+  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L +  C+P VITY  LI      G    AL L  EM +         KP+  TY+ I
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG VD+A E+   ++ +   P+V++Y  L+    +   W E + L+ +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNVV+ ++++  LC++GK++ A  LL LM +  + P+A++Y+ L+  FC  G+++   E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              +M S GC  D  +YN ++   CKN + ++AL ++ +L   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL + +EM  N +  D  TY + I  LC
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 183/377 (48%), Gaps = 7/377 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    SP  V+ +NI++G L      D  L +  +L S    P + TY+ILI      G
Sbjct: 184 MRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     +   +L     P++ T+ ++I+G+C E  +  A  +   L+  GCEP+VI+YN
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L+  L   G       L  +M +   +      PN VTYSI+I  LC++G +++A  L 
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCD------PNVVTYSILITTLCRDGKIEEAMNLL 356

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             MK + L P+  +Y  LI  FC     + A   L  M+  G  P++V+ N ++  LCKN
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK D A  +   + +    PN+ +YNT+      +G   R   + + M S G   D+ +Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +I+  C+   V+EA  L  ++      P+VVTYN +  G  +  + E A+ +   M G
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536

Query: 361 NDVAADTCTYRTFIDGL 377
           N    +  TY   I+G+
Sbjct: 537 NGCRPNETTYTVLIEGI 553



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    D    +  R+ S    PD  TY+I+I   C  G++ L   +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + + +     E      P+ ++Y+I++  L  +G  ++ ++L  +M  E  
Sbjct: 276 EGMVDRAFEMVRNLELKGCE------PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNVVTY+ LI   C      EA  LL  M ++G+ P+  S + ++   C+ G++D A  
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ M+     P+   YNT++   C  GK ++  E+F  +  +GC  +  SYN + +   
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            + +   AL +  E+   GI P  +TYN++   L      + A +L V+M+  +      
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 369 TYRTFIDGLC 378
           TY   + G C
Sbjct: 510 TYNIVLLGFC 519



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+  L ++   +  ++L K +   GL PD Y+Y  LI  FC+ G++ +    
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P++V + +++  LC   +  +A  +F KL   GC PN  +YNT+ + L  
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  I AL++  EM + NG       P+ +TY+ +I  LC+EG VD+A EL + M+    
Sbjct: 451 SGDKIRALHMILEMMS-NG-----IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY  ++ GFC A+   +A  +L  MV  G +PN  +  V++  +   G    A  
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           L + +V+ D   + +++  L   F L   + R  + F
Sbjct: 565 LANDLVRIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 6/276 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NILL  L     ++    L  ++ S    P++ TYSILI   C+ G++     +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++  LI   C E R+  A      + + GC P+++ YNT++  LC+
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F ++    GE+G    PN+ +Y+ +   L   G   +A  + L+M    +
Sbjct: 416 NGKADQALEIFGKL----GEVGC--SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ +TY S+I   C     +EA  LL++M      P+VV+ N+++   CK  ++++A  
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           +L+ MV    RPN  TY  L++G    G      EL
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 7/287 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C     +E+  L   +   G  P+VI    LI G     +   A+ +  E+    G+   
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQ--- 155

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+   Y+ +I+G CK   +D A  +  +M+ ++ +P+ VTY  +I   C     + A
Sbjct: 156 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L +++    QP V++  +++      G +D A +L+D M+   ++P+ FTYNT++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G ++R  E+  ++E  GC+ D  SYNIL+       + EE   L  ++  +   P 
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VVTY+ L   L    + E A+ L   M+   +  D  +Y   I   C
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 34/180 (18%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQ----CDV------------------------------ 258
           I +  C++G    +  LL+ MV+     DV                              
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +P+ F YN L++GFC   +I+    +   M S     D  +YNI+I   C   +++ AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + N+L     +PTV+TY  L          + ALKL  EM    +  D  TY T I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +G       L  +M   G   D      LI G+   + + +A+ +   L   G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             YN L +G  ++ + + A ++   M+  D + DT TY   I  LC R ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 196/366 (53%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N +L  L K      V S++K +    +  ++ T+ ++IN  CK+G+      +   +
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               F+P+V+T+ ++I G C   ++ +A AL  ++ A    PN IT+N LI+G CR  + 
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +F+EM           +PN VTY+ +I+GLC  G +D+A  L  +M    L PNV
Sbjct: 316 TAAKKVFEEMQRQG------LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI+GFC      EA+ +L ++  +G+ PNV++ N +++   K G+MD+A  L  +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   V PN  TYN L+ GFC  G +   ++L   ME  G K D  +YNIL++  CK  E
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             +A+ L +E+   G+ P+ +TYN L  G F    +  AL +   M+     A+  TY  
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549

Query: 373 FIDGLC 378
            I G C
Sbjct: 550 LIKGFC 555



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 180/336 (53%), Gaps = 6/336 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K        +L K + +  + P+  T++ILI+ FC+   V+    +
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PNVVT+ SLI GLC+  ++ EA  L  K+   G +PNV+TYN LING C+
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  L   +EM +  G+ G+   PN +T++ +ID   K G +D A  L   M    +
Sbjct: 382 KK----MLKEAREMLDDIGKRGLA--PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  LI GFC   +  EA+ L  EM   G++ ++V+ N++++ LCK G+   A R
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M +  + P+  TYN L+DG+   G       +   ME  G + +  +YN+LI G+C
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFC 555

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              ++EEA  L NE+  KG+ P   TY+ L   + E
Sbjct: 556 NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 591



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 194/384 (50%), Gaps = 9/384 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF--PDLYTYSILINCFCKMG 60
           H+  +    +    LL   AKN HY    ++F  L+ +G +   +     +L+  + K G
Sbjct: 115 HLLANAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNG 173

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++ L    F R     F  + ++   ++  L  E RI    +++ ++       NV+T++
Sbjct: 174 EMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFD 233

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +INGLC+ G    A ++ ++M          F P+ +TY+ IIDG CK G + KA  L 
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWG------FSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN +T+  LI GFC   +   AK +  EM  QG+QPNVV+ N ++N LC N
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  L D M    ++PN  TYN L++GFC    +   +E+   +   G   +  ++
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+ Y K   +++A  L + +   G+ P V TYN L  G       + A KL  EM+G
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
           N + AD  TY   +D LC + + R
Sbjct: 468 NGLKADLVTYNILVDALCKKGETR 491



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 41/268 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L  N   D  L L  +++ +GL P++ TY+ LIN FCK   +     +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I +   APNV+TF +LI       R+ +A  L + +   G  PNV TYN LI G CR
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L KEM  GNG      K + VTY+I++D LCK+G   KA  L  +M    L
Sbjct: 452 EGNVKEARKLAKEM-EGNG-----LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGL 505

Query: 189 NP-----------------------------------NVVTYTSLIHGFCHANDWNEAKG 213
           NP                                   N+VTY  LI GFC+     EA  
Sbjct: 506 NPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR 565

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           LL EM+++G+ PN  + +++ +E+ + G
Sbjct: 566 LLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 6/165 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS++N L+    +  +      L K +   GL  DL TY+IL++  CK G+      +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ +T+ +LI G   E     A  + T ++  G   N++TYN LI G C 
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
            G    A  L  EM     E G++  PN  TY I+ D + ++GF+
Sbjct: 557 KGKLEEANRLLNEML----EKGLI--PNRTTYDILRDEMMEKGFI 595


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 207/390 (53%), Gaps = 10/390 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNS---IGLFPDLYTYSILINCFC 57
           M + +P P  V  FN +L  +AK + YD V++L+KR+ +   I + PDLYT +IL+NCFC
Sbjct: 76  MAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFC 134

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +  Q S      G++++    P++VT +SL+ G C  + I +A  +  +++  G + +V+
Sbjct: 135 RCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVV 194

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
               LI+ LC+    + AL + K M +          PN VTYS +I GLCK G +  A+
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAE 248

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
               +M  + +NPNV+T+++LI  +      ++   +   M+   + PNV + + ++  L
Sbjct: 249 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 308

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C + ++D A ++LDLM+     PN  TY+TL +GF  + +++   +L   M   G   + 
Sbjct: 309 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 368

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            S N LI GY +  +++ AL ++  +   G+ P + +YN +  GLF   + E+AL  F  
Sbjct: 369 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 428

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           MQ      D  TY   I G+C    V+  Y
Sbjct: 429 MQKTRNDLDIITYTIMIHGMCKACMVKEAY 458



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 162/341 (47%), Gaps = 38/341 (11%)

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R     F+   + +  +++      +  +A  LF  +      P+++ +N ++  + +  
Sbjct: 40  RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              V +NL+K + N     G+   P+  T +I+++  C+      A     +M    + P
Sbjct: 100 MYDVVINLWKRIENAE---GIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEP 156

Query: 191 NVVTYTSLIHGFCHANDWNEA------------------KGLLIE--------------- 217
           ++VT +SL++GFC +N   +A                    +LI+               
Sbjct: 157 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 216

Query: 218 --MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             M D+G+ PNVV+ + ++  LCK+G++ +A R L  M    + PN  T++ L+D +   
Sbjct: 217 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 276

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK+++V  ++  M  M    + F+Y+ LI G C +  V+EA+ + + +  KG  P VVTY
Sbjct: 277 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +TL +G F+  + +  +KL  +M    VAA+T +  T I G
Sbjct: 337 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 377



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 6/289 (2%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           IL+  L KN+     L + KR+   G+ P++ TYS LI   CK G+++        +   
Sbjct: 198 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 257

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              PNV+TF++LI       ++ +  +++  +     +PNV TY++LI GLC       A
Sbjct: 258 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 317

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + +   M +          PN VTYS + +G  K   VD   +L   M    +  N V+ 
Sbjct: 318 IKMLDLMISKGCT------PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 371

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LI G+  A   + A G+   M   G+ PN+ S N+++  L  NG+++ A    + M +
Sbjct: 372 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                +  TY  ++ G C    +    +LF  ++    + D  +Y I+I
Sbjct: 432 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 480



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 7/253 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+   AK      V S++K +  + + P+++TYS LI   C   +V     +
Sbjct: 261 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 320

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+++L  G    SR+ +   L   +   G   N ++ NTLI G  +
Sbjct: 321 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 380

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL +F  MT+ NG I     PN  +Y+I++ GL   G V+KA   F  M+    
Sbjct: 381 AGKIDLALGVFGYMTS-NGLI-----PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +++TYT +IHG C A    EA  L  ++  + V+P+  +  +++ EL + G M   + 
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-MRTEAD 493

Query: 249 LLDLMVQCDVRPN 261
            L+   Q  VR N
Sbjct: 494 ALNRFYQKHVRQN 506


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 182/335 (54%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ LIN FCKM ++     +  R+    F+P+ VT+  +I  LC+  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L +  C+P VITY  LI      G    AL L  EM +         KP+  TY+ I
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG VD+A E+   ++ +   P+V++Y  L+    +   W E + L+ +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNVV+ ++++  LC++GK++ A  LL LM +  + P+A++Y+ L+  FC  G+++   E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              +M S GC  D  +YN ++   CKN + ++AL ++ +L   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL + +EM  N +  D  TY + I  LC
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    D    +  R+ S    PD  TY+I+I   C  G++ L   +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A  + + +     E  V+                               PN VT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YSI+I  LC++G +++A  L   MK + L P+  +Y  LI  FC     + A   L  M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P++V+ N ++  LCKNGK D A  +   + +    PN+ +YNT+      +G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R   + + M S G   D+ +YN +I+  C+   V+EA  L  ++      P+VVTYN + 
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G  +  + E A+ +   M GN    +  TY   I+G+
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+  L ++   +  ++L K +   GL PD Y+Y  LI  FC+ G++ +    
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P++V + +++  LC   +  +A  +F KL   GC PN  +YNT+ + L  
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  I AL++  EM + NG       P+ +TY+ +I  LC+EG VD+A EL + M+    
Sbjct: 451 SGDKIRALHMILEMMS-NG-----IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY  ++ GFC A+   +A  +L  MV  G +PN  +  V++  +   G    A  
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           L + +V+ D   + +++  L   F L   + R  + F
Sbjct: 565 LANDLVRIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 6/278 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V S+NILL  L     ++    L  ++ S    P++ TYSILI   C+ G++    
Sbjct: 294 SEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +      P+  ++  LI   C E R+  A      + + GC P+++ YNT++  L
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    AL +F ++    GE+G    PN+ +Y+ +   L   G   +A  + L+M   
Sbjct: 414 CKNGKADQALEIFGKL----GEVGC--SPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            ++P+ +TY S+I   C     +EA  LL++M      P+VV+ N+++   CK  ++++A
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
             +L+ MV    RPN  TY  L++G    G      EL
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 9/288 (3%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C     +E+  L   +   G  P+VI    LI G     +   A+ +         EI  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM--------EILE 151

Query: 152 VF-KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            F +P+   Y+ +I+G CK   +D A  +  +M+ ++ +P+ VTY  +I   C     + 
Sbjct: 152 KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +L +++    QP V++  +++      G +D A +L+D M+   ++P+ FTYNT++ 
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C  G ++R  E+  ++E  G + D  SYNIL+       + EE   L  ++  +   P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VVTY+ L   L    + E A+ L   M+   +  D  +Y   I   C
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 34/180 (18%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQ----CDV------------------------------ 258
           I +  C++G    +  LL+ MV+     DV                              
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +P+ F YN L++GFC   +I+    +   M S     D  +YNI+I   C   +++ AL 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + N+L     +PTV+TY  L          + ALKL  EM    +  D  TY T I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +G       L  +M   G   D      LI G+   + + +A+ +   L   G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             YN L +G  ++ + + A ++   M+  D + DT TY   I  LC R ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 182/335 (54%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ LIN FCKM ++     +  R+    F+P+ VT+  +I  LC+  ++  A  +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L +  C+P VITY  LI      G    AL L  EM +         KP+  TY+ I
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFTYNTI 265

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG VD+A E+   ++ +   P+V++Y  L+    +   W E + L+ +M  +  
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNVV+ ++++  LC++GK++ A  LL LM +  + P+A++Y+ L+  FC  G+++   E
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              +M S GC  D  +YN ++   CKN + ++AL ++ +L   G  P   +YNT+F  L+
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL + +EM  N +  D  TY + I  LC
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLC 480



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 183/377 (48%), Gaps = 7/377 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    SP  V+ +NI++G L      D  L +  +L S    P + TY+ILI      G
Sbjct: 180 MRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEG 238

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     +   +L     P++ T+ ++I+G+C E  +  A  +   L+  GCEP+VI+YN
Sbjct: 239 GVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L+  L   G       L  +M +   +      PN VTYSI+I  LC++G +++A  L 
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCD------PNVVTYSILITTLCRDGKIEEAMNLL 352

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             MK + L P+  +Y  LI  FC     + A   L  M+  G  P++V+ N ++  LCKN
Sbjct: 353 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 412

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK D A  +   + +    PN+ +YNT+      +G   R   + + M S G   D+ +Y
Sbjct: 413 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITY 472

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +I+  C+   V++A  L  ++      P+VVTYN +  G  +  + E A+ +   M G
Sbjct: 473 NSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVG 532

Query: 361 NDVAADTCTYRTFIDGL 377
           N    +  TY   I+G+
Sbjct: 533 NGCRPNETTYTVLIEGI 549



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    D    +  R+ S    PD  TY+I+I   C  G++ L   +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + + +     E      P+ ++Y+I++  L  +G  ++ ++L  +M  E  
Sbjct: 272 EGMVDRAFEMIRNLELKGCE------PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNVVTY+ LI   C      EA  LL  M ++G+ P+  S + ++   C+ G++D A  
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ M+     P+   YNT++   C  GK ++  E+F  +  +GC  +  SYN + +   
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            + +   AL +  E+   GI P  +TYN++   L      ++A +L V+M+  +      
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505

Query: 369 TYRTFIDGLC 378
           TY   + G C
Sbjct: 506 TYNIVLLGFC 515



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+  L ++   +  ++L K +   GL PD Y+Y  LI  FC+ G++ +    
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P++V + +++  LC   +  +A  +F KL   GC PN  +YNT+ + L  
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  I AL++  EM + NG       P+ +TY+ +I  LC+EG VDKA EL + M+    
Sbjct: 447 SGDKIRALHMILEMVS-NG-----IDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEF 500

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTY  ++ GFC A+   +A  +L  MV  G +PN  +  V++  +   G    A  
Sbjct: 501 HPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 560

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           L + +V+ +   + +++  L   F L   + R  + F
Sbjct: 561 LANDLVRINA-ISEYSFKRLHRTFPLLNVLQRSSQTF 596



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 6/276 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NILL  L     ++    L  ++ S    P++ TYSILI   C+ G++     +
Sbjct: 292 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++  LI   C E R+  A      + + GC P+++ YNT++  LC+
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 411

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F ++    GE+G    PN+ +Y+ +   L   G   +A  + L+M    +
Sbjct: 412 NGKADQALEIFGKL----GEVGC--SPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGI 465

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ +TY S+I   C     ++A  LL++M      P+VV+ N+++   CK  ++++A  
Sbjct: 466 DPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAID 525

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           +LD MV    RPN  TY  L++G    G      EL
Sbjct: 526 VLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 7/287 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C     +E+  L   +   G  P+VI    LI G     +   A+ +  E+    G+   
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQ--- 151

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+   Y+ +I+G CK   +D A  +  +M+ ++ +P+ VTY  +I   C     + A
Sbjct: 152 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L +++    QP V++  +++      G +D A +LLD M+   ++P+ FTYNT++ G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G ++R  E+  ++E  GC+ D  SYNIL+       + EE   L  ++  +   P 
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VVTY+ L   L    + E A+ L   M+   +  D  +Y   I   C
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 34/180 (18%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQ----CDV------------------------------ 258
           I +  C++G    +  LL+ MV+     DV                              
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +P+ F YN L++GFC   +I+    +   M S     D  +YNI+I   C   +++ AL 
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + ++L     +PTV+TY  L          + ALKL  EM    +  D  TY T I G+C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +G       L  +M   G   D      LI G+   + V +A+ +   L   G +P V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             YN L +G  ++ + + A ++   M+  D + DT TY   I  LC R ++
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 205


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 197/366 (53%), Gaps = 7/366 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH    P  VS F+ L+G  A+    D  ++  + +   GL PD   Y+++I  FC+ G
Sbjct: 287 MRHRGIKPDLVS-FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 345

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +S    +   ++     P+VVT+ +L+ GLC E R+++A  L  +++  G  P++ T+ 
Sbjct: 346 LMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFT 405

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G C  G    AL LF  M N         +P+ VTY+ +IDG+C++G +DKA +L+
Sbjct: 406 TLIHGYCIEGKLDKALQLFDTMLNQR------LRPDIVTYNTLIDGMCRQGDLDKANDLW 459

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    + PN VTY+ LI   C      +A G L EM+++G+ PN+++ N I+   C++
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +    + L  M+   V P+  TYNTL+ G+    K++   +L   ME    + D  +Y
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N+LING+  +  V+EA  ++ ++  KGI+P   TY ++ +G      ++ A +L  EM  
Sbjct: 580 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 639

Query: 361 NDVAAD 366
              A D
Sbjct: 640 RGFAPD 645



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 198/376 (52%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N +L  L ++  +D    +FK ++  G+ PD+ +++ILI  FC++G++     I
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +      P++V+F+ LI       ++  A A   +++ FG  P+ + Y  +I G CR
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +  EM      +G    P+ VTY+ +++GLCKE  +  A+ L  +M+   +
Sbjct: 344 AGLMSDALRVRDEM------VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+T+LIHG+C     ++A  L   M++Q ++P++V+ N +++ +C+ G +D A+ 
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M   ++ PN  TY+ L+D  C  G++         M + G   +  +YN +I GYC
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  V +      ++    + P ++TYNTL HG  +  +   A KL   M+   V  D  
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   I+G  V   V+
Sbjct: 578 TYNMLINGFSVHGNVQ 593



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 201/370 (54%), Gaps = 10/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SF IL+G   +    +  L ++K +   G+ PDL ++S LI  F + G++      
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA- 317

Query: 69  FGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           + R +R CF   P+ V +T +I G C    + +A  +  ++   GC P+V+TYNTL+NGL
Sbjct: 318 YLREMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+    + A  L  EM     E GV   P+  T++ +I G C EG +DKA +LF  M  +
Sbjct: 377 CKERRLLDAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 430

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P++VTY +LI G C   D ++A  L  +M  + + PN V+ +++++  C+ G++++A
Sbjct: 431 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
              LD M+   + PN  TYN+++ G+C +G +++ ++    M       D  +YN LI+G
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K  ++ +A  L N +  + ++P VVTYN L +G       + A  +F +M    +  D
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 610

Query: 367 TCTYRTFIDG 376
             TY + I+G
Sbjct: 611 RYTYMSMING 620



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 198/393 (50%), Gaps = 29/393 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++    K   +D V ++   +    +FPD+ T++++++   + G       +   +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P +VT+ S++KGLC      +A  +F ++  FG  P+V ++  LI G CR G  
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 133 IVALNLFKEMTNGNGE---------IGVVFK--------------------PNTVTYSII 163
             AL ++KEM +   +         IG+  +                    P+ V Y+++
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G C+ G +  A  +  +M      P+VVTY +L++G C      +A+GLL EM ++GV
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P++ +   +++  C  GK+D A +L D M+   +RP+  TYNTL+DG C  G +++  +
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L+  M S     +  +Y+ILI+ +C+  +VE+A    +E+  KGI P ++TYN++  G  
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                 +  K   +M  N V+ D  TY T I G
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N  T   ++   C      +  A+ ++++     P+V+T+N +++   R G    A+ L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
             M +         KP  VTY+ ++ GLC+ G  DKA E+F +M    + P+V ++T LI
Sbjct: 215 DSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 268

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            GFC   +  EA  +  EM  +G++P++VS + ++    + GKMD+A   L  M    + 
Sbjct: 269 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 328

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+   Y  ++ GFC  G ++    +   M   GC  D  +YN L+NG CK + + +A  L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            NE+  +G+ P + T+ TL HG     + ++AL+LF  M    +  D  TY T IDG+C
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 447



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L K +       L   +   G+ PDL T++ LI+ +C  G++     +
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P++VT+ +LI G+C +  + +A  L+  + +    PN +TY+ LI+  C 
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 483

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A     EM N     G++  PN +TY+ II G C+ G V K ++   +M    +
Sbjct: 484 KGQVEDAFGFLDEMINK----GIL--PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+++TY +LIHG+   +  ++A  LL  M  + VQP+VV+ N+++N    +G +  A  
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           + + M    + P+ +TY ++++G    G      +L   M   G   DD
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 6/280 (2%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           AA  +  + +   E N  T N +++  C+         +  EM     E   VF P+ VT
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-----EKRCVF-PDVVT 193

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +++++D   + G  + A  L   M  + L P +VTY S++ G C +  W++A  +  EM 
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D GV P+V S  +++   C+ G+++ A ++   M    ++P+  +++ L+  F   GK++
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                   M   G   D   Y ++I G+C+   + +AL + +E+   G  P VVTYNTL 
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +GL + R+   A  L  EM+   V  D CT+ T I G C+
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 413


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 180/311 (57%), Gaps = 17/311 (5%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
            NVVTFT+L+ GLC E R+++A AL  ++   G +P+ +TY T++NG+C+ G T+ ALN+
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
            ++M           K N V YS I+D LCK+G   KA+ +F +M  + + PNV+TY  +
Sbjct: 68  LRKMDESQ------IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM 121

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I G+C    W++A+ LL +M+++ + P+VV+ + ++N   K GK+  A  L   M++ ++
Sbjct: 122 IDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE------ 312
            P   TY++++DGFC   ++   K +F  M S GC  D  + N LI+G C+ K       
Sbjct: 182 FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGF 241

Query: 313 -----VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                V  A  L+ E+   G+ P +VT NTL  GL E  + E+AL++F   Q + +  DT
Sbjct: 242 CQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDT 301

Query: 368 CTYRTFIDGLC 378
            T    I+G+C
Sbjct: 302 ATCNIIINGMC 312



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 206/387 (53%), Gaps = 17/387 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++        +     L + +    + PD+ T+S LIN F K G+VS    +
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +LR    P  +T++S+I G C  SR+ +A  +F  + + GC P++IT NTLI+G CR
Sbjct: 173 YREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232

Query: 129 T-----------GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
                       G+  VA +LF+EM + NG       P+ VT + ++ GLC+ G ++KA 
Sbjct: 233 AKRHLIHGFCQVGNVNVAQDLFQEMIS-NG-----VSPDIVTCNTLLAGLCENGKLEKAL 286

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E+F   +   ++ +  T   +I+G C  N  +EA  L   +   GV+ +VV+ N+++   
Sbjct: 287 EMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVF 346

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K G    A  +   M+   + P+  TYN+++DGFC   ++   +++  SM S GC  D 
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +++ LI GYCK   V++ L L++E+  +G+    +TYN L HG  ++     A  +F E
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           M  + V  DT T+R+ + GLC + +++
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQ 493



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 199/398 (50%), Gaps = 19/398 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V +F  L+  L +       L+L  R+   G  PD  TY  ++N  CK+G       
Sbjct: 7   PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++  S    NVV +++++  LC +   ++A  +FT++   G  PNV+TYN +I+G C
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L ++M   N        P+ VT+S +I+   KEG V  A+EL+ +M   N
Sbjct: 127 SYGKWSDAEQLLRDMIERN------IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN------- 240
           + P  +TY+S+I GFC  +   +AK +   MV +G  P++++ N +++  C+        
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 241 ----GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
               G ++ A  L   M+   V P+  T NTL+ G C  GK+ +  E+F   +      D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             + NI+ING CK  +V+EA  L+N LP  G++  VVTYN L     +     RA  +++
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNS 394
           EM    +   T TY + +DG C   Q R   AR+  +S
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFC--KQNRLEEARQMVDS 396



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 83/166 (50%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV+ G   NVV+   +MN LC+ G++  A  L+D MV+   +P+A TY T+++G C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                 +   M+    K +   Y+ +++  CK+    +A +++ E+  KGI P V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  G     +   A +L  +M   ++  D  T+   I+      +V
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKV 166


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 200/359 (55%), Gaps = 8/359 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+G LA+N H    L  F+ +   G+ PD   Y+ILI+ FC+ G +S    +
Sbjct: 395 PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +L R CF  +VVT+ + + GLC +    +A  LF ++   G  P+  T+ TLI G C
Sbjct: 455 RDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   ALNLF+ M   N       KP+ VTY+ +IDG CK G + +AKEL+  M  ++
Sbjct: 514 KDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ ++Y ++++GFC +    EA  L  +M+++G++PN+V+ N ++   C++G M  A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  M+   + P++F+YNTL+DG+     + +   L   ME  G + +  +YN+++NG+
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           C   +++EA  +  ++   GI P   TY++L +G       + A +   EM    +  D
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 202/371 (54%), Gaps = 12/371 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N LL  + +  +      +F  ++  G+ PDL ++S LI    + G +    + 
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + RS   P+ V +T LI G C    + +A  +  ++ A GC  +V+TYNT +NGLC+
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EM     E G+V  P+  T++ +I G CK+G +DKA  LF  M   NL
Sbjct: 480 KKMFADADMLFNEMV----ERGMV--PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +LI GFC A +   AK L  +M+ + + P+ +S   ++N  C +G +  A  
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M++  +RPN  T NTL+ G+C +G + +  E    M S G   D FSYN LI+GY 
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVEMQGNDVAA 365
           K   +E+A  L NE+  +G++  ++TYN + +G     ++++AE+ L+  +E+  N    
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN---P 710

Query: 366 DTCTYRTFIDG 376
           D  TY + I+G
Sbjct: 711 DGATYSSLING 721



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 207/401 (51%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF---- 66
           V + NI++  L K++ ++ V+     +   G+F D+ TY+ LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 67  ----------------VIFG---------------RILRSCFAPNVVTFTSLIKGLCAES 95
                           +++G                +L+    PN  T+ +L+  +C   
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
            I+EA  +F ++   G  P+++++++LI  L R GH   AL  F+EM       G+V  P
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--P 430

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V Y+I+IDG C+ G +  A ++  +M       +VVTY + ++G C    + +A  L 
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EMV++G+ P+  +   ++   CK+G MD A  L + MV+ +++P+  TYNTL+DGFC  
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G++ R KEL+  M       D  SY  ++NG+C +  + EAL+L +++  KGI+P +VT 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  G        +A +   +M  N +  D+ +Y T IDG
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+    + G V L + I+G ++R     NV T   ++  LC + +        + ++  G
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
              +++TYNTLIN  CR G    A  L    ++   E      P  +TY+ I+ GLCK G
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCKIG 341

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
             D+AK++ ++M    L PN  TY +L+   C  ++  EA+ +  EM  +GV P++VS +
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++  L +NG +  A      M +  + P+   Y  L+DGFC  G ++   ++   M + 
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC  D  +YN  +NG CK K   +A  L+NE+  +G+ P   T+ TL  G  +    ++A
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L LF  M   ++  D  TY T IDG C
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFC 548



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 11/358 (3%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           +++ K  ++++S      S+GL      Y +L+  + +  ++  G   F  + R   + +
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLI-----YDLLVRTYVQAKKLREGSEAFQILRRKGVSVS 221

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           +     L+ GL     +  A  ++ ++   G E NV T N ++N LC+       +    
Sbjct: 222 INACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLS 281

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           +M  G G    VF  + VTY+ +I+  C+EG V++A +L        + P ++TY ++++
Sbjct: 282 DM-EGKG----VF-ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G C    ++ AK +LIEM+  G+ PN  + N ++ E+C+   +  A  + D M +  V P
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  ++++L+      G + +    F  ME  G   D+  Y ILI+G+C+N  + +AL + 
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +E+  +G    VVTYNT  +GL + +    A  LF EM    +  D  T+ T I G C
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + Y  L+  +  A    E       +  +GV  ++ + N ++  L + G +D A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +V+  +  N +T N +++  C   K   V      ME  G   D  +YN LIN YC+   
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           VEEA  L N    +G++P ++TYN + +GL +I + +RA  + +EM    +  +  TY T
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 373 FIDGLCVRPQV 383
            +  +C R  +
Sbjct: 368 LLVEICRRDNI 378


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 200/359 (55%), Gaps = 8/359 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+G LA+N H    L  F+ +   G+ PD   Y+ILI+ FC+ G +S    +
Sbjct: 395 PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +L R CF  +VVT+ + + GLC +    +A  LF ++   G  P+  T+ TLI G C
Sbjct: 455 RDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   ALNLF+ M   N       KP+ VTY+ +IDG CK G + +AKEL+  M  ++
Sbjct: 514 KDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ ++Y ++++GFC +    EA  L  +M+++G++PN+V+ N ++   C++G M  A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  M+   + P++F+YNTL+DG+     + +   L   ME  G + +  +YN+++NG+
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           C   +++EA  +  ++   GI P   TY++L +G       + A +   EM    +  D
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 202/371 (54%), Gaps = 12/371 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N LL  + +  +      +F  ++  G+ PDL ++S LI    + G +    + 
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + RS   P+ V +T LI G C    + +A  +  ++ A GC  +V+TYNT +NGLC+
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EM     E G+V  P+  T++ +I G CK+G +DKA  LF  M   NL
Sbjct: 480 KKMFADADMLFNEMV----ERGMV--PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY +LI GFC A +   AK L  +M+ + + P+ +S   ++N  C +G +  A  
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M++  +RPN  T NTL+ G+C +G + +  E    M S G   D FSYN LI+GY 
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVEMQGNDVAA 365
           K   +E+A  L NE+  +G++  ++TYN + +G     ++++AE+ L+  +E+  N    
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN---P 710

Query: 366 DTCTYRTFIDG 376
           D  TY + I+G
Sbjct: 711 DGATYSSLING 721



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 207/401 (51%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF---- 66
           V + NI++  L K++ ++ V+     +   G+F D+ TY+ LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 67  ----------------VIFG---------------RILRSCFAPNVVTFTSLIKGLCAES 95
                           +++G                +L+    PN  T+ +L+  +C   
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
            I+EA  +F ++   G  P+++++++LI  L R GH   AL  F+EM       G+V  P
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--P 430

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V Y+I+IDG C+ G +  A ++  +M       +VVTY + ++G C    + +A  L 
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EMV++G+ P+  +   ++   CK+G MD A  L + MV+ +++P+  TYNTL+DGFC  
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G++ R KEL+  M       D  SY  ++NG+C +  + EAL+L +++  KGI+P +VT 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  G        +A +   +M  N +  D+ +Y T IDG
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+    + G V L + I+G ++R     NV T   ++  LC + +        + ++  G
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
              +++TYNTLIN  CR G    A  L    ++   E      P  +TY+ I+ GLCK G
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCKIG 341

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
             D+AK++ ++M    L PN  TY +L+   C  ++  EA+ +  EM  +GV P++VS +
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++  L +NG +  A      M +  + P+   Y  L+DGFC  G ++   ++   M + 
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC  D  +YN  +NG CK K   +A  L+NE+  +G+ P   T+ TL  G  +    ++A
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L LF  M   ++  D  TY T IDG C
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFC 548



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 11/358 (3%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           +++ K  ++++S      S+GL      Y +L+  + +  ++  G   F  + R   + +
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLI-----YDLLVRTYVQAKKLREGSEAFQILRRKGVSVS 221

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           +     L+ GL     +  A  ++ ++   G E NV T N ++N LC+       +    
Sbjct: 222 INACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLS 281

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           +M  G G    VF  + VTY+ +I+  C+EG V++A +L        + P ++TY ++++
Sbjct: 282 DM-EGKG----VF-ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G C    ++ AK +LIEM+  G+ PN  + N ++ E+C+   +  A  + D M +  V P
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  ++++L+      G + +    F  ME  G   D+  Y ILI+G+C+N  + +AL + 
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +E+  +G    VVTYNT  +GL + +    A  LF EM    +  D  T+ T I G C
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYC 513



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + Y  L+  +  A    E       +  +GV  ++ + N ++  L + G +D A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +V+  +  N +T N +++  C   K   V      ME  G   D  +YN LIN YC+   
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           VEEA  L N    +G++P ++TYN + +GL +I + +RA  + +EM    +  +  TY T
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 373 FIDGLCVRPQV 383
            +  +C R  +
Sbjct: 368 LLVEICRRDNI 378


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 201/380 (52%), Gaps = 11/380 (2%)

Query: 5   HPSPPPVSSFNILLGCLAK-----NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           H   P V S+N +L  L +     ++ YD    +F+ +   G+ P++YTY+++I      
Sbjct: 161 HGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQ 220

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G +  G     ++ +   +PNVVT+ +LI   C + ++ EA AL   +   G   N+I+Y
Sbjct: 221 GDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISY 280

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N++INGLC  G       L +EM  G G +     P+ VTY+ +++G CKEG + +   L
Sbjct: 281 NSVINGLCGKGRMSEVGELVEEM-RGKGLV-----PDEVTYNTLVNGFCKEGNLHQGLVL 334

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M  + L+PNVVTYT+LI+  C A + + A  +  +M  +G++PN  +   +++  C+
Sbjct: 335 LSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQ 394

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G M+ A ++L  M+     P+  TYN L+ G+C  G++     +   M   G   D  S
Sbjct: 395 KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVS 454

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ +I G+C+ +E+ +A  +  E+  KG+ P  VTY++L  GL   ++   A  LF EM 
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514

Query: 360 GNDVAADTCTYRTFIDGLCV 379
              +  D  TY + I+  CV
Sbjct: 515 RRGLPPDEVTYTSLINAYCV 534



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 201/382 (52%), Gaps = 8/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++  +      +  L   +++   G+ P++ TY+ LI+  CK  +V     +
Sbjct: 205 PNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMAL 264

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     A N++++ S+I GLC + R+ E   L  +++  G  P+ +TYNTL+NG C+
Sbjct: 265 LRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCK 324

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+    L L  EM      +G    PN VTY+ +I+ +CK G + +A E+F QM+   L
Sbjct: 325 EGNLHQGLVLLSEM------VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGL 378

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+LI GFC     NEA  +L EM+  G  P+VV+ N +++  C  G++  A  
Sbjct: 379 RPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVG 438

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  MV+  + P+  +Y+T++ GFC   ++ +  ++   M   G   D  +Y+ LI G C
Sbjct: 439 ILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLC 498

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++ EA  L+ E+  +G+ P  VTY +L +      +  +AL+L  EM       D  
Sbjct: 499 LQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNV 558

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           TY   I+GL    + R   A+R
Sbjct: 559 TYSVLINGL--NKKARTKVAKR 578



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 205/377 (54%), Gaps = 8/377 (2%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           MR M      P V ++N L+    K K     ++L + +   G+  +L +Y+ +IN  C 
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G++S    +   +      P+ VT+ +L+ G C E  + +   L +++   G  PNV+T
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TLIN +C+ G+   A+ +F +M           +PN  TY+ +IDG C++G +++A +
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRG------LRPNERTYTTLIDGFCQKGLMNEAYK 403

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +  +M     +P+VVTY +L+HG+C      EA G+L  MV++G+ P+VVS + ++   C
Sbjct: 404 VLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFC 463

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           +  ++  A ++ + MV+  V P+  TY++L+ G CL  K+    +LF  M   G   D+ 
Sbjct: 464 RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LIN YC + E+ +AL L++E+  +G  P  VTY+ L +GL +  + + A +L +++
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583

Query: 359 QGNDVAADTCTYRTFID 375
              +   D  TY T I+
Sbjct: 584 FYEESVPDDVTYNTLIE 600



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 209/394 (53%), Gaps = 18/394 (4%)

Query: 2   RHMHPS----PPPVSS---FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILIN 54
           RH+H +      P SS   F++++  L++       L+L    N  G  P + +Y+ +++
Sbjct: 116 RHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLD 175

Query: 55  CFCKMGQVSL-----GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
              +    +         +F  ++R+  +PNV T+  +I+G+ ++  + +      K++ 
Sbjct: 176 ALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEK 235

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
            G  PNV+TYNTLI+  C+      A+ L + M  G    GV    N ++Y+ +I+GLC 
Sbjct: 236 EGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG----GVA--ANLISYNSVINGLCG 289

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +G + +  EL  +M+ + L P+ VTY +L++GFC   + ++   LL EMV +G+ PNVV+
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
              ++N +CK G +  A  + D M    +RPN  TY TL+DGFC  G +N   ++   M 
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G      +YN L++GYC    V+EA+ +   +  +G+ P VV+Y+T+  G    R+  
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +A ++  EM    V  DT TY + I GLC++ ++
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 183/385 (47%), Gaps = 21/385 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K  +    L L   +   GL P++ TY+ LINC CK G +S    I
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      PN  T+T+LI G C +  + EA  + +++   G  P+V+TYN L++G C 
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + + M     E G+   P+ V+YS +I G C+E  + KA ++  +M  + +
Sbjct: 430 LGRVQEAVGILRGMV----ERGL--PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY+SLI G C      EA  L  EM+ +G+ P+ V+   ++N  C +G++  A R
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN--- 305
           L D MVQ    P+  TY+ L++G     +    K L + +       DD +YN LI    
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCS 603

Query: 306 ------------GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                       G+C    + EA  ++  +  +  KP    YN + HG        +A  
Sbjct: 604 NNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYN 663

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L++E++ +  A  T      +  L 
Sbjct: 664 LYMELEHSSFACHTVAVIALVKALA 688



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 29/263 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S++ ++    + +       + + +   G+ PD  TYS LI   C   ++   F 
Sbjct: 449 PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  ++R    P+ VT+TSLI   C +  + +A  L  ++   G  P+ +TY+ LINGL 
Sbjct: 509 LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLN 568

Query: 128 RTGHTIVA----LNLFKEMTNGNGEIGVVFKPNTVTYSIIID---------------GLC 168
           +   T VA    L LF E +           P+ VTY+ +I+               G C
Sbjct: 569 KKARTKVAKRLLLKLFYEES----------VPDDVTYNTLIENCSNNEFKSVEGLVKGFC 618

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            +G +++A  +F  M   N  PN   Y  +IHG     + ++A  L +E+       + V
Sbjct: 619 MKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTV 678

Query: 229 SSNVIMNELCKNGKMDNASRLLD 251
           +   ++  L + G  D  SRLL 
Sbjct: 679 AVIALVKALAREGMNDELSRLLQ 701


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 195/371 (52%), Gaps = 10/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L CLA+ +  +    LF++L +    P+++T++I+I+  CK G ++    
Sbjct: 160 PPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARA 215

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R+     +P+VVT+ SLI G      + E   L  +++  GC P+V+TYN L+N  C
Sbjct: 216 LLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFC 275

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A + F EM       GV+   N VT+S  +D  CK G V +A +LF QM+ + 
Sbjct: 276 KFGRMERAYSYFAEMKRE----GVM--ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKG 329

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN VTYT L+ G C A   ++A  L  EMV QGV  NVV+  V+++ LCK GK+  A 
Sbjct: 330 MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAE 389

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +  LM +  +R N   Y TL+ G  +     R   L   M+  G + D   Y  LI G 
Sbjct: 390 DVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGL 449

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C  ++++EA SL N++   G+KP  V Y  +    F+ R+   A+ L  +M  +    + 
Sbjct: 450 CNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNI 509

Query: 368 CTYRTFIDGLC 378
            TY   +DGLC
Sbjct: 510 VTYCALVDGLC 520



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    + V  L   +   G  PD+ TY+ L+NCFCK G++   +  
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY 286

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R     NVVTF++ +   C    + EA  LF +++  G +PN +TY  L++G C+
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L  EM     + GV    N VTY++++DGLCKEG V +A+++F  M+   +
Sbjct: 347 AGRLDDALVLTNEMV----QQGVPL--NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGI 400

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + YT+LIHG     +   A  LL EM D+G++ +V     ++  LC   K+D A  
Sbjct: 401 RANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKS 460

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M +C ++PN   Y  +MD      K +    L   M   G + +  +Y  L++G C
Sbjct: 461 LLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA+S +N++   G++P V  Y  L  GL +  + ++A+ L  EM    ++ D  
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV 580

Query: 369 TYRTFIDG 376
              + +DG
Sbjct: 581 VCTSLMDG 588



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 178/365 (48%), Gaps = 6/365 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F+  +    KN      + LF ++   G+ P+  TY+ L++  CK G++    V+  
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +++     NVVT+T L+ GLC E ++ EA  +F  ++  G   N + Y TLI+G     
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           ++  AL+L  EM +   E+ V        Y  +I GLC    +D+AK L  +M    L P
Sbjct: 419 NSERALSLLSEMKDKGMELDVSL------YGALIWGLCNLQKLDEAKSLLNKMDECGLKP 472

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V YT+++     A   +EA  LL +M+D G +PN+V+   +++ LCK G +D A    
Sbjct: 473 NNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF 532

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + MV   + PN   Y  L+DG C  G++++   L   M   G   D+     L++G+ K 
Sbjct: 533 NKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ 592

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +++A +L  ++   G++  +  Y     G   +   + A ++  EM  N +  D   Y
Sbjct: 593 GNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652

Query: 371 RTFID 375
              I+
Sbjct: 653 NCLIN 657



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 186/412 (45%), Gaps = 58/412 (14%)

Query: 3   HMHPSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           H+   P P S+   L    LA+ + +    SL  RL + G  P L     L++   +   
Sbjct: 61  HLLSHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHLAAS--LVDLLHR-AA 117

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           ++LG        R    P+VV   +L+  L     + +A     +++     PN  T N 
Sbjct: 118 LALGP-------RRSALPSVVD--TLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNH 168

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           ++  L R   + +A  LF+++            PN  T++I+ID LCKEG + +A+ L  
Sbjct: 169 ILLCLARERSSELAWRLFEQLP----------APNVFTFNIMIDFLCKEGDLAEARALLA 218

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +MK    +P+VVTY SLI G+    +  E + L+ EM   G +P+VV+ N ++N  CK G
Sbjct: 219 RMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFG 278

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           +M+ A      M +  V  N  T++T +D FC  G +    +LF  M   G K ++ +Y 
Sbjct: 279 RMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYT 338

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVT--------------------------- 334
            L++G CK   +++AL L NE+  +G+   VVT                           
Sbjct: 339 CLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERA 398

Query: 335 --------YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                   Y TL HG F  + +ERAL L  EM+   +  D   Y   I GLC
Sbjct: 399 GIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLC 450



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 121/247 (48%), Gaps = 9/247 (3%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PNT T + I+  L +E   + A  LF Q+      PNV T+  +I   C   D  EA+ L
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L  M   G  P+VV+ N +++   K G+++   +L+  M  C  RP+  TYN L++ FC 
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCK 276

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G++ R    F  M+  G   +  +++  ++ +CKN  V EA+ L+ ++  KG+KP  VT
Sbjct: 277 FGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVT 336

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           Y  L  G  +  + + AL L  EM    V  +  TY   +DGLC   +V      F    
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396

Query: 390 RKGNSGN 396
           R G   N
Sbjct: 397 RAGIRAN 403



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 7/274 (2%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K+ +  LSL   +   G+  D+  Y  LI   C + ++     +  ++      PN V +
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           T+++       +  EA AL  K+   G  PN++TY  L++GLC+ G    A++ F +M  
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKM-- 535

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
               + +  +PN   Y+ ++DGLCK G +DKA  L  +M  + ++ + V  TSL+ G   
Sbjct: 536 ----VDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             +  +A  L  +M++ G+Q ++      +   C    +  A  +L  M++  + P+A  
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651

Query: 265 YNTLMDGFCLTGKINRVKELFVSMES-MGCKHDD 297
           YN L++     G +     L   MES + C + D
Sbjct: 652 YNCLINKCQKLGNMEEAAILQNEMESLLSCTNAD 685



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V PN  + N I+  L +    + A RL + +      PN FT+N ++D  C  G +   +
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEAR 214

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M+++GC  D  +YN LI+GY K  E+EE   L  E+   G +P VVTYN L +  
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
            +  + ERA   F EM+   V A+  T+ TF+D  C    VR     F   R KG   N
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPN 333


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 205/398 (51%), Gaps = 33/398 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             + ++G+ P++ TY+ +I+ +C  G+V    +IF 
Sbjct: 191 VVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFD 250

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+  T+ S I G+C E ++ EA+ +  K+K  G  P  +TYNTLI+G C  G
Sbjct: 251 LMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG 310

Query: 131 HT-------------------------IVALNLFKEMTNGNG------EIGVVFKPNTVT 159
           +                          I AL L  +M   +G      E G+V  P++VT
Sbjct: 311 NLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV--PDSVT 368

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+I+G C+ G V KA  L  +M  + + P  VTYTSLI+         +A  L  ++V
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIV 428

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+++  N +++  C NG MD A  +L  M Q  V P+  T+NTLM G C  GK+ 
Sbjct: 429 RKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +EL   M+S G K D  SYN LI+GY K  ++++A  + +E+   G  PT++TYN L 
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL +  + + A +L  EM    +  +  TY + I+G+
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L    K+   +    L+  +  + +   + T++I+IN  CK G++      
Sbjct: 154 PHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEF 213

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      PNVVT+ ++I G C+  R+  A  +F  +K  G +P+  TY + I+G+C+
Sbjct: 214 IGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK 273

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + ++M     EIG+  +P  VTY+ +IDG C +G ++ A +   +M  E L
Sbjct: 274 EGKLEEASGMLEKMK----EIGL--RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TY  LIH        +EA G++ EM ++G+ P+ V+ N+++N  C+ G +  A  
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P   TY +L+      G++ +  +LF  +   G   D   +N LI+G+C
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHC 447

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  ++ A ++  E+    + P  VT+NTL  G     + E A +L  EM+   +  D  
Sbjct: 448 ANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHI 507

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   R  ++  +  R
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVR 529



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 6/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L+    + K  D     F  +   G+ P ++  + +++ F K  +    +V++  + 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R     +VVTF  +I  LC E ++ +A      ++A G +PNV+TYNT+I+G C  G   
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F  M           KP++ TY   I G+CKEG +++A  +  +MK   L P  V
Sbjct: 244 GARMIFDLMKCRG------VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G+C+  +   A     +MV +G+ P V + N++++ L  + KMD A  ++  M
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P++ TYN L++G+C  G + +   L   M S G +    +Y  LI    K   +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++A  L+ ++  KGI P ++ +N L  G       +RA  +  EM    V  D  T+ T 
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 374 IDGLCVRPQVR 384
           + G C   +V 
Sbjct: 478 MQGRCREGKVE 488



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 6/343 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           Y +LI   C++ +    F  F  +      P+V     ++      +R  +A  L+ ++ 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
               + +V+T+N +IN LC+ G     L   KE       +G+  KPN VTY+ II G C
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEG----KLKKAKEFIGLMEALGI--KPNVVTYNTIIHGYC 237

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
             G V+ A+ +F  MK   + P+  TY S I G C      EA G+L +M + G++P  V
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +++  C  G ++ A    D MV+  + P   TYN L+    L  K++    +   M
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   D  +YNILINGYC+   V++A +L++E+  KGI+PT VTY +L + L +  + 
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           ++A  LF ++    +  D   +   IDG C    +   +A  K
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 3/241 (1%)

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +F E+    G +G+      V Y ++I   C+    D A E F  MK + + P+V    
Sbjct: 104 EVFNELGVARGVLGI---KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACN 160

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            ++  F  +N   +A  L  EM    ++ +VV+ N+++N LCK GK+  A   + LM   
Sbjct: 161 DMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL 220

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            ++PN  TYNT++ G+C  G++   + +F  M+  G K D ++Y   I+G CK  ++EEA
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +  ++   G++PT VTYNTL  G       E A     +M    +     TY   I  
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340

Query: 377 L 377
           L
Sbjct: 341 L 341



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L+K         LF+++   G+FPDL  ++ LI+  C  G +   F +
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAM 458

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+ VTF +L++G C E ++  A  L  ++K+ G +P+ I+YNTLI+G  +
Sbjct: 459 LKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSK 518

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  EM      + + F P  +TY+ +I GLCK    D A++L  +M  + +
Sbjct: 519 RGDMKDAFRVRDEM------LSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572

Query: 189 NPNVVTYTSLIHGF 202
            PN  TY SLI G 
Sbjct: 573 TPNDNTYLSLIEGI 586



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 97/198 (48%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V Y  LI   C     ++A      M  +GV P+V + N +++   K+ + + A  L   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++ +  T+N +++  C  GK+ + KE    ME++G K +  +YN +I+GYC    
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           VE A  +++ +  +G+KP   TY +   G+ +  + E A  +  +M+   +     TY T
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 373 FIDGLCVRPQVRFTYARR 390
            IDG C +  +   +  R
Sbjct: 302 LIDGYCNKGNLEMAFDYR 319


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 203/400 (50%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +++ ++  L K +  D   +  +++ + G+ P+ +TY+ LI  +   GQ      
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVT + L+  LC   +I EA  +F  +   G  PNV +Y  ++NG  
Sbjct: 311 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYA 370

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 371 TKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G+  ++V  + I+N LCK G++ +A  + DL V   + P A  Y+ LMDG+CL GK
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +D  Y  L+NGYCK   ++E LSL+ E+  KGIKP+ + YN 
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 609

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLFE  +   A   F EM  + +A + CTY   + GL
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 191/390 (48%), Gaps = 45/390 (11%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    N++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             L+KG C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  P+ V YS +IDG  KEG V+KA +LF +M    + P+ VTY+S++H  C
Sbjct: 210 EG----GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 204 HANDWNEAKGLLIEMVDQGVQPN-----------------------------------VV 228
            A   ++A+  L +MV++GV PN                                   VV
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + +++M  LCK GK+  A  + D M      PN F+Y  +++G+   G +  + +LF  M
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM 385

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   D +++N+LI  Y     +++A+ ++NE+   G+KP VVTY T+   L  I + 
Sbjct: 386 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + A++ F +M    VA D   Y   I G C
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 179/374 (47%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+ I+L   A       +  LF  +   G+ PD+YT+++LI  +   G + 
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   Y+ LI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +S II+ LCK G V  A+ +F   
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVF------FSSIINNLCKLGRVMDAQNIFDLT 525

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P  V Y+ L+ G+C      +A  +   MV  G++PN V    ++N  CK G++
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   YN ++DG    G+    K  F  M   G   +  +YNI+
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 364 AADTCTYRTFIDGL 377
                TY   I  L
Sbjct: 706 VPCVVTYSIMITNL 719



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 187/373 (50%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V + ++L+G L K         +F  +   G  P++++Y+I++N +   G +  
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +L    AP++ TF  LIK       + +A  +F +++  G +P+V+TY T+I 
Sbjct: 378 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LCR G    A+  F +M +     GV   P+   Y  +I G C  G + KAKEL  ++ 
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYHCLIQGFCTHGSLLKAKELISEIM 491

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              ++ ++V ++S+I+  C      +A+ +    V+ G+ P  V  +++M+  C  GKM+
Sbjct: 492 NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKME 551

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A R+ D MV   + PN   Y TL++G+C  G+I+    LF  M   G K     YNI+I
Sbjct: 552 KALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 611

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  +      A   ++E+   GI     TYN +  GLF+ R  + A+ LF E++  +V 
Sbjct: 612 DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVK 671

Query: 365 ADTCTYRTFIDGL 377
            +  T  T I G+
Sbjct: 672 INIITLNTMIAGM 684



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 202/418 (48%), Gaps = 50/418 (11%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S++ILL  L    K+   D +L +     ++   PD+  YS +I+ 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPDVVAYSTVIDG 228

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P+ VT++S++  LC    + +A A   ++   G  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT S+++  LCK G + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKIKE 342

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NPNV +YT +++G+                                 
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 402

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           + + Y+ L+ GFC  G + + KEL   + + G   D   ++ +IN  CK   V +A +++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +     G+ PT V Y+ L  G   + + E+AL++F  M    +  +   Y T ++G C
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN+L+   A     D  + +F  +   G+ PD+ TY  +I   C++G++      
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    AP+   +  LI+G C    +++A  L +++   G   +++ ++++IN LC+
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F    N      V   P  V YS+++DG C  G ++KA  +F  M    +
Sbjct: 512 LGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V Y +L++G+C     +E   L  EM+ +G++P+ +  N+I++ L + G+   A  
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  N  TYN ++ G       +    LF  + +M  K +  + N +I G  
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + + VEEA  L+  +   G+ P VVTY+ +   L +    E A  +F  MQ      D+
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y  LI  FC  G +  
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F+S+I  LC   R+++A  +F      G  P  + Y+ L++
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIGRIDEGLSLFREML 596

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+ + Y  +I G   A     AK    EM + G+  N  + N+++  L KN   D
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ N  T NT++ G   T ++   K+LF S+   G      +Y+I+I
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R  +RF  A+
Sbjct: 777 LEHLTTMLLVDLFSSKGTC-REHIRFLPAK 805



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 143

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            N +  + ++ G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 144 VNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+ + +++   K G ++ A  L   MVQ  + P+  TY++++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M + G   ++++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT + L   L +  + + A  +F  M       +  +Y   ++G   +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATK 372


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 198/380 (52%), Gaps = 35/380 (9%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M+   P +  F  +   L K  H+ TV+SL  ++   G+  DL   +IL+NCFC +GQV 
Sbjct: 1   MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQV- 59

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
                                       C   ++ E       + A G + N ++Y TLI
Sbjct: 60  ----------------------------CLNDKVKETLHFHDDVIAKGFQLNQVSYGTLI 91

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GLC+ G T  A+ + + +       G++ +PN V YS II  LCK+  V  A +L+ QM
Sbjct: 92  DGLCKAGETRAAMQVLRNID------GLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + ++P+V+TY +L++G        EA GL  +M+ + ++P++ + N++++ LCK G+M
Sbjct: 146 LLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEM 205

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  +L +M++  V P+  TYN+LMDG+ L  + N+   +F +M   G   D  SY+++
Sbjct: 206 KKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVM 265

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING CK K V+EA++L  E+  K + P  VTY++L  GL +  +   A  L  EM     
Sbjct: 266 INGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQ 325

Query: 364 AADTCTYRTFIDGLCVRPQV 383
            AD  TY + +D LC   QV
Sbjct: 326 PADVITYNSLLDALCKNHQV 345



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 170/321 (52%), Gaps = 22/321 (6%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V ++N L+ GCL   +  + V  LF ++    + PD+YT++IL++  CK G++     
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAV-GLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARN 210

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +++    P+V+T+ SL+ G     +  +A  +F  +   G  P+V +Y+ +INGLC
Sbjct: 211 VLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLC 270

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +T     A+NL KEM + +        PNTVTYS +IDGL K G +  A +L  +M    
Sbjct: 271 KTKMVDEAVNLLKEMHSKS------MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRG 324

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              +V+TY SL+   C  +  ++A  LL ++ DQG+QP++ +  ++++ LCKNG++ +A 
Sbjct: 325 QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQ 384

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +  ++              L+ G+ L    ++   L   ME  GC  +  ++ ILI   
Sbjct: 385 EVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRAL 430

Query: 308 CKNKEVEEALSLYNELPFKGI 328
            +N   ++A+ L  E+  +G+
Sbjct: 431 FENDMNDKAVELLREMIARGL 451



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN------ELCKN 240
           N  P +  +  +       N ++    L  +M  +G+Q ++V+ N+++N      ++C N
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            K+       D ++    + N  +Y TL+DG C  G+     ++  +++ +  + +   Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + +I   CK+K V +A  LY+++  K I P V+TYNTL +G   + + + A+ LF +M  
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
            ++  D  T+   +DGLC   +++
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMK 206



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 14/140 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  V ++N LL  L KN   D  ++L  ++   G+ PD+YTY+IL++  CK G++
Sbjct: 321 HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRL 380

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                ++ +IL             LIKG   +S   +A +L +K++  GC PN +T+  L
Sbjct: 381 KDAQEVY-QIL-------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEIL 426

Query: 123 INGLCRTGHTIVALNLFKEM 142
           I  L        A+ L +EM
Sbjct: 427 IRALFENDMNDKAVELLREM 446


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 193/379 (50%), Gaps = 12/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +    LFK +   G+ PD+YTY+ILI+CF K G +      
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P VVT+T+LI       ++  A  LF  + A GC PNVITY  LI+G C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +G+   A  ++  M  G+ +I            V  KPN VTY  ++DGLCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  +   PN + Y +LI GFC A   +EA+ +  +MV++G  PNV + + +++ L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D   ++L  M++    PN   Y  ++DG     K +   +L + ME  GCK + 
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K  +V++ L L+ E+  KG  P  VTY  L +        + A  L  E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 358 MQGNDVAADTCTYRTFIDG 376
           M+         +Y   I+G
Sbjct: 846 MKQTYWPKHVSSYCKVIEG 864



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 178/385 (46%), Gaps = 22/385 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     ++    +   +   G  PD  TYS +I   C   +V   F +F  +  +   P
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI        I +A     ++   GCEP V+TY TLI+   +     VA  LF
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN------------ 187
           + M      I     PN +TY+ +IDG CK G ++KA +++ +M+ +             
Sbjct: 583 ELM------IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636

Query: 188 ----LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 PNVVTY +L+ G C A+   +A+ LL  M   G +PN +  + +++  CK  K+
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  +   MV+    PN +TY++L+D      +++ V ++   M    C  +   Y  +
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G  K  + +EA  L   +  KG KP VVTY  +  G  +  + ++ L+LF EM     
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 364 AADTCTYRTFIDGLCVRPQVRFTYA 388
           A +  TY   I+  C    +   YA
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYA 841



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 24/366 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + + G FP++ TY+ LI+ +CK G +     I
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616

Query: 69  FGRI--------------LRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+              +++  A  PNVVT+ +L+ GLC   ++ +A  L   +   GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           EPN I Y+ LI+G C+      A  +F +M          + PN  TYS +ID L K+  
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG------YNPNVYTYSSLIDRLFKDKR 730

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D   ++  +M   +  PN+V YT +I G       +EA  L++ M ++G +PNVV+   
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K GK+D    L   M      PN  TY  L++  C TG ++    L   M+   
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
                 SY  +I GY   +E   +L L  E+   G  PT++ Y  L     +  + E AL
Sbjct: 851 WPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVAL 908

Query: 353 KLFVEM 358
           +L  E+
Sbjct: 909 ELHKEV 914



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 196/431 (45%), Gaps = 73/431 (16%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSI----GLFPDLYTYSILINCFCKMGQVS 63
           P V ++ ILL GCL K +     L   KR+ S+    G +P    ++ L++ +CK    S
Sbjct: 341 PNVQTYRILLCGCLNKKQ-----LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALFTKL 107
             + +  ++ +    P  V +  LI  +C                A + ++ A  +  K+
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 108 ----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
                           KA+         G  P+  TY+ +I  LC       A  LFKEM
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                  GVV  P+  TY+I+ID   K G + +A     +M  +   P VVTYT+LIH +
Sbjct: 516 KG----TGVV--PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV-QCDV--- 258
             A   + A  L   M+ +G  PNV++   +++  CK+G ++ A ++   M    D+   
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDV 629

Query: 259 ------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                       +PN  TY  L+DG C   K+   ++L  +M   GC+ +   Y+ LI+G
Sbjct: 630 DMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDG 689

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA  +++++  +G  P V TY++L   LF+ ++ +  LK+  +M  N  A +
Sbjct: 690 FCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPN 749

Query: 367 TCTYRTFIDGL 377
              Y   IDGL
Sbjct: 750 IVIYTEMIDGL 760



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 155/317 (48%), Gaps = 10/317 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    ++ L+    K    D    +F ++   G  P++YTYS LI+   K  ++ L   +
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L +  APN+V +T +I GL   ++  EA  L   ++  GC+PNV+TY  +I+G  +
Sbjct: 738 LSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGK 797

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L LF+EM    G  G    PN VTY+++I+  C  G +D+A  L  +MK    
Sbjct: 798 AGKVDKCLELFREM----GSKGCA--PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 851

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V +Y  +I G+    ++  + GLL E+   G  P ++   V+++   K G+++ A  
Sbjct: 852 PKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALE 909

Query: 249 LLDLMVQCDVRPNAFT--YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           L   ++   +   A    Y +L+  F    KI+   ELF  M   G   D  ++  L+ G
Sbjct: 910 LHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMG 969

Query: 307 YCKNKEVEEALSLYNEL 323
             + +  EEAL L + L
Sbjct: 970 LIRVRRWEEALQLSDSL 986



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 177/462 (38%), Gaps = 101/462 (21%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    DT   + + ++ +GL  D +T        CK+G+      +
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              I +  F PN + +  +I GLC  S   EA     ++++  C PNV TY         
Sbjct: 299 ---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C++     A  L K+M           
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC------ 409

Query: 154 KPNTVTYSIIIDGLCKEGFV---------------------------------------- 173
           KP  V Y+I+I  +C  G +                                        
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 174 -DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            +KA ++  +M      P+  TY+ +I   C+A+    A  L  EM   GV P+V +  +
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K G +  A   LD MV+    P   TY TL+  +    K++   ELF  M + G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYN-----------ELPFK-----GIKPTVVTYN 336
           C  +  +Y  LI+GYCK+  +E+A  +Y            ++ FK       KP VVTY 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  GL +  + + A  L   M  +    +T  Y   IDG C
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 15/331 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +LI   C+ G  ++     GR+    + P  +T+ +L++      ++  A  +  ++   
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   +  T       LC+ G    AL+L ++           F PNT+ Y+ +I GLC+ 
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEKED---------FVPNTILYNKMISGLCEA 321

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
            F ++A +   +M+  +  PNV TY  L+ G  +       K +L  M+ +G  P+    
Sbjct: 322 SFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIF 381

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI------NRVKEL 284
           N +++  CK+     A +LL  M +C+ +P    YN L+   C  G++         ++ 
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 441

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M S G   +  +        C   + E+A  + +E+   G  P   TY+ +   L  
Sbjct: 442 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             + E A  LF EM+G  V  D  TY   ID
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILID 532



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K+K  D VL +  ++      P++  Y+ +I+   K+ +    + +
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNVVT+T++I G     ++ +   LF ++ + GC PN +TY  LIN  C 
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832

Query: 129 TGHTIVALNLFKEMTN-----------------------GNGEIGVVFK----PNTVTYS 161
           TGH   A  L +EM                           G +  V K    P  + Y 
Sbjct: 833 TGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYK 892

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT--YTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ID   K G ++ A EL  ++   +++       YTSLI+ F +A+  + A  L  +M+
Sbjct: 893 VLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMI 952

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
             GV P++ +   ++  L +  + + A +L D + Q D+
Sbjct: 953 RDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           NV++ + C+NG  + A   L  +     +P   TYN L+  F    K++  + +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +G   D+F+        CK  +  EALSL  +  F    P  + YN +  GL E    E 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNKMISGLCEASFFEE 326

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A+     M+      +  TYR  + G   + Q+
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 3/190 (1%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI   C    WN A   L  + D G +P  ++ N ++    +  K+D A  +   M +  
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +  + FT        C   K+ + +E    +E      +   YN +I+G C+    EEA+
Sbjct: 272 LSMDEFTLGFFAQALC---KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              N +      P V TY  L  G    +Q  R  ++   M           + + +   
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 378 CVRPQVRFTY 387
           C      + Y
Sbjct: 389 CKSDDFSYAY 398


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL   AK    D V   FK +   G  P ++TY+I+I+C CK G V     +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+ S+I G     R+ +    F ++K   CEP+VITYN LIN  C+
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   + L  ++EM  GNG      KPN V+YS ++D  CKEG + +A + ++ M+   L
Sbjct: 345 FGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI   C   + ++A  L  EM+  GV+ NVV+   +++ LC   +M  A  
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V PN  +YN L+ GF     ++R  EL   ++  G K D   Y   I G C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++E A  + NE+   GIK   + Y TL    F+       L L  EM+  D+     
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578

Query: 369 TYRTFIDGLC 378
           T+   IDGLC
Sbjct: 579 TFCVLIDGLC 588



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L      +  +  F ++    +FP   + + L++ F K+G+       
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   P V T+  +I  +C E  +  A  LF ++K  G  P+ +TYN++I+G  +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     +  F+EM +      +  +P+ +TY+ +I+  CK G +    E + +MK   L
Sbjct: 310 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y++L+  FC      +A    ++M   G+ PN  +   +++  CK G + +A R
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+Q  V  N  TY  L+DG C   ++   +ELF  M++ G   +  SYN LI+G+ 
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K ++ AL L NEL  +GIKP ++ Y T   GL  + + E A  +  EM+   + A++ 
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 369 TYRTFIDG 376
            Y T +D 
Sbjct: 544 IYTTLMDA 551



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 201/405 (49%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    D  +  F+ +  +   PD+ TY+ LINCFCK G++ +G   
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  +   PNVV++++L+   C E  + +A   +  ++  G  PN  TY +LI+  C+
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L  EM     ++GV +  N VTY+ +IDGLC    + +A+ELF +M    +
Sbjct: 415 IGNLSDAFRLGNEML----QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ +Y +LIHGF  A + + A  LL E+  +G++P+++     +  LC   K++ A  
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK-------INRVKELFVSMESMG--------C 293
           +++ M +C ++ N+  Y TLMD +  +G        ++ +KEL + +  +         C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588

Query: 294 KH--------------DDFS-------YNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           K+              +DF        +  +I+G CK+ +VE A +L+ ++  KG+ P  
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             Y +L  G F+      AL L  +M    +  D   Y + + GL
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K       +  +  +  +GL P+ YTY+ LI+  CK+G +S  F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+     NVVT+T+LI GLC   R+ EA  LF K+   G  PN+ +YN LI+G  +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL L  E+  G G      KP+ + Y   I GLC    ++ AK +  +MK   +
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + YT+L+  +  + +  E   LL EM +  ++  VV+  V+++ LCKN  +  A  
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 249 LLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             + +     ++ NA  +  ++DG C   ++     LF  M   G   D  +Y  L++G 
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            K   V EAL+L +++   G+K  ++ Y +L  GL    Q ++A     EM G  +  D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 161/346 (46%), Gaps = 41/346 (11%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P    F +L   L     + EA   F+K+K F   P   + N L++   + G T 
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                FK+M      IG   +P   TY+I+ID +CKEG V+ A+ LF +MK+  L P+ V
Sbjct: 245 DVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY S+I GF      ++      EM D   +P+V++ N ++N  CK GK+         M
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKHDDF 298
               ++PN  +Y+TL+D FC  G + +  + +V M  +G               CK  + 
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418

Query: 299 S--------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           S                    Y  LI+G C  + ++EA  L+ ++   G+ P + +YN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            HG  + +  +RAL+L  E++G  +  D   Y TFI GLC   ++ 
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 40/282 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++S+N L+    K K+ D  L L   L   G+ PDL  Y   I   C + ++    V+
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N + +T+L+          E   L  ++K    E  V+T+  LI+GLC+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++ F  ++N  G      + N   ++ +IDGLCK+  V+ A  LF QM  + L
Sbjct: 590 NKLVSKAVDYFNRISNDFG-----LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644

Query: 189 NPN-----------------------------------VVTYTSLIHGFCHANDWNEAKG 213
            P+                                   ++ YTSL+ G  H N   +A+ 
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            L EM+ +G+ P+ V    ++ +  + G +D A  L   +++
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N ++  L K +  D   +  +++ +  + P+ +TY+ LI  +   GQ      
Sbjct: 254 PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVR 313

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVT + L+  LC   +I EA  +F  +   G  P+V +YN ++NG  
Sbjct: 314 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 373

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 374 TKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 433 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 492

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G+  ++V  + I+N LCK G++ +A  + DL V   + P+A  YN LMDG+CL GK
Sbjct: 493 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 552

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  +GIKP+ + Y+ 
Sbjct: 553 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 612

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLFE  +   A   F EM  + +A D CTY   + GL
Sbjct: 613 IIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    N++  
Sbjct: 93  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 152

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             L++G C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M 
Sbjct: 153 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 212

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  PN V Y+ +IDG  KEG V+KA +LF +M    + P++VTY S++H  C
Sbjct: 213 EG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 268

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++ V PN  + N ++      G+   A R+   M +  + P+  
Sbjct: 269 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 328

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T + LM   C  GKI   +++F +M   G   D FSYNI++NGY     + +   L++ +
Sbjct: 329 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 388

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P   T+N L          ++A+ +F EM+ + V  D  TYRT I  LC
Sbjct: 389 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 189/399 (47%), Gaps = 11/399 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+NI+L   A       +  LF  +   G+ PD YT+++LI  +   G + 
Sbjct: 355 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 414

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   YN LI
Sbjct: 415 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +S II+ LCK G V  A+ +F   
Sbjct: 475 QGFCTHGSLLKAKELISEIMNNGMHLDIVF------FSSIINNLCKLGRVMDAQNIFDLT 528

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+ V Y  L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 588

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   Y+ ++DG    G+    K  F  M   G   D  +YNI+
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIV 648

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 649 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 708

Query: 364 AADTCTYRTFI-----DGLCVRPQVRFTYARRKGNSGNT 397
                TY   I     +GL    +  F+  +  G   N+
Sbjct: 709 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 207/452 (45%), Gaps = 85/452 (18%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S++ILL  L    K+   D +L +     ++   P++  Y+ +I+ 
Sbjct: 173 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDG 231

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT+ S++  LC    + +A A   ++      PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT S+++  LCK G + +
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKIKE 345

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +Y  +++G+                                 
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK----------- 294
           + + YN L+ GFC  G + + KEL   + + G               CK           
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525

Query: 295 ---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                     D   YN+L++GYC   ++E+AL +++ +   GI+P VV Y TL +G  +I
Sbjct: 526 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 585

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +  L LF EM    +   T  Y   IDGL
Sbjct: 586 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y+ LI  FC  G +  
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 485

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F+S+I  LC   R+++A  +F      G  P+ + YN L++
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIGRIDEGLSLFREML 599

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+ + Y+ +I G   A     AK    EM + G+  ++ + N+++  L KN   D
Sbjct: 600 QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 659

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ N  T NT++DG   T ++   K+LF S+          +Y+I+I
Sbjct: 660 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 719

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 720 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 779

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R Q+RF  A+
Sbjct: 780 LEHLTAMLLVDLFSSKGTC-REQIRFLPAK 808



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 93  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 146

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            N +  + +++G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 147 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    PNVV+ N +++   K G ++ A  L   MVQ  + P+  TYN+++  
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M +     ++++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT + L   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 375


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 40/403 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN +L  L K +      ++FKR    G  P++ TYS LI+   KM ++     +
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++      N VT+++++ GL    R+ +A  +  +++  GC P+ +TYNTLI+G  +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L +EM          F P+ VTY+ +  GLC+ G  D+A E+   M     
Sbjct: 626 RQRLREAVGLLREMLEAG------FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            PN +TY+S++ G C A    EA G   +M  D+ V P+V++ + +++ LCK G++D A 
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L+ M++    P+  T++ L++G C  G+I+   ELF  M   GCK D ++YN +IN Y
Sbjct: 740 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVT--------------------------------- 334
           C   E   A +L  E+   GI    VT                                 
Sbjct: 800 CLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEIS 859

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YNTL   L   R++E+AL+L   M  +  + D C Y T +DGL
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL 902



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 184/347 (53%), Gaps = 9/347 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P L TY+ L+    K G V     +   ++ S  +P+V+TF S++ GLC E RI++A  +
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F +    GC PNV+TY+TLI+GL +      AL L  +M     E+G   + NTVTYS +
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELGC--RANTVTYSTV 584

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +DGL K G ++ A  +  QM+     P+ VTY +LI GF       EA GLL EM++ G 
Sbjct: 585 VDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 644

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+VV+   + + LC++G+ D A  +LD M      PNA TY++++DG C  G++     
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704

Query: 284 LFVSM--ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            F  M  + +   H   +Y+ LI+G CK   ++EA      +   G  P VVT++ L +G
Sbjct: 705 YFEKMARDEVVAPHV-IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           L +  + +  L+LF  M      AD   Y   I+  C++ +    YA
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYA 810



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 197/391 (50%), Gaps = 19/391 (4%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P V  FN L+  L + +  D    LF  +   G   D+ TY+IL+   CK+ ++   
Sbjct: 305 PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364

Query: 66  F--VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF-GCEPNVITYNTL 122
           +  V   R    C +PNVVTF++LI+GLC   R+ +A  ++ ++ A  G  PN  TY  L
Sbjct: 365 YRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFL 423

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGE---------------IGVVFKPNTVTYSIIIDGL 167
           + GLC+ G +      F++M                     +  V +P  VTY+ ++ GL
Sbjct: 424 LEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGL 483

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K G V  A  L   M    L+P+V+T+ S++ G C      +A  +    +++G +PNV
Sbjct: 484 SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 543

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ + +++ L K  KMD A +LL  MV+   R N  TY+T++DG    G++     +   
Sbjct: 544 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   GC  D  +YN LI+G+ K + + EA+ L  E+   G  P+VVTY TL HGL    +
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + A+++   M     A +  TY + +DGLC
Sbjct: 664 FDEAVEILDYMAARGCAPNAITYSSIVDGLC 694



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 182/379 (48%), Gaps = 20/379 (5%)

Query: 18  LGCLAKNKHYDTVLS-------------LFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           LGC A    Y TV+              + +++   G  PD  TY+ LI+ F K  ++  
Sbjct: 572 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +L + F P+VVT+T+L  GLC   R  EA  +   + A GC PN ITY+++++
Sbjct: 632 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G    AL  F++M         V  P+ + YS +IDGLCK G +D+A E   +M 
Sbjct: 692 GLCKAGRVTEALGYFEKMARDE-----VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+VVT++ LI+G C A   +    L   M ++G + ++ + N ++N  C  G+  
Sbjct: 747 RAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFS 806

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL+ M    +  N  T+  ++   C   +I+     F S+    C+ D+ SYN LI
Sbjct: 807 AAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCR-DEISYNTLI 864

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
                ++  E+AL L   +   G  P    Y T+  GLF+    E A KL  EM+    +
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            D  TY   I GL    Q+
Sbjct: 925 PDLRTYTIMISGLSKAKQL 943



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 200/429 (46%), Gaps = 56/429 (13%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL-- 64
           S P V +F I +  L+K  +       F  +   G+ P+  TY  LI+  CK G++ +  
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266

Query: 65  ----------GFVIFGRILRS-CFA----------------PNVVTFTSLIKGLCAESRI 97
                     G   F  +L   C A                PNVV F SL+ GLC   R+
Sbjct: 267 GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRV 326

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            EA  LF  +K  GC  +VITYN L+ GLC+      A    + M    G       PN 
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG-----CSPNV 381

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHAND--------- 207
           VT+S +I GLC  G V++A E++ +M   E ++PN  TY  L+ G C A D         
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441

Query: 208 ------WNEAKGLLIE------MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
                 W  +    I       ++ Q  +P +V+ N ++  L K+G + +A  LL+ M++
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIE 501

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + P+  T+N+++DG C   +I     +F      GC+ +  +Y+ LI+G  K  +++E
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 561

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           AL L  ++   G +   VTY+T+  GL ++ + E A+ +  +M+      D  TY T ID
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 376 GLCVRPQVR 384
           G   R ++R
Sbjct: 622 GFFKRQRLR 630



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 185/367 (50%), Gaps = 14/367 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+L+  L K        + F++    G  P + TYS +I+  C+  +V  G  +   +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                APN VT+ +L+  L  + R  EA +L  ++ A GC P +IT+  +I GLC+ G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +  EM +        F P+   +++++  LC+ G VD+A   F Q+      P+ 
Sbjct: 123 EAAFRVVDEMVDRG------FVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VTY +++ G   A    EA G++++++ +    P V +  + ++ L K G +  A    D
Sbjct: 177 VTYNTMVDGLYKAGRL-EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M Q  V PN  TY+ L+DG C  GK++    L     S   +   F+++ L++G C+  
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS---QAGMFAFSSLLHGLCQAH 292

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +EEA+ L   +P     P VV +N+L +GL + R+ + A +LF  M+ +  +AD  TY 
Sbjct: 293 RLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349

Query: 372 TFIDGLC 378
             + GLC
Sbjct: 350 ILLKGLC 356



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 187/378 (49%), Gaps = 26/378 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L          SL +R+ + G  P+L T+ ++I   CK G++   F +
Sbjct: 69  PNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRV 128

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++   F P+V   T L+  LC   R+ EA   F ++   G  P+ +TYNT+++GL +
Sbjct: 129 VDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK 188

Query: 129 TGHTIVA---LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            G    A   L L  E  +          P   T++I +DGL K G +  A E F  M  
Sbjct: 189 AGRLEAAGMVLQLLAESFS---------SPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             ++PN VTY +LI G C A   + A GLL    D+  Q  + + + +++ LC+  +++ 
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEE 296

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +LL  M      PN   +N+LM+G C   +++   ELF  M+  GC  D  +YNIL+ 
Sbjct: 297 AIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353

Query: 306 GYCKNKEVEEALSLYNELPF----KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           G CK + + EA   Y  +      +G  P VVT++TL  GL    +  +A +++  M   
Sbjct: 354 GLCKLRRIPEA---YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410

Query: 362 D-VAADTCTYRTFIDGLC 378
           + ++ +  TY   ++GLC
Sbjct: 411 EGISPNRFTYAFLLEGLC 428



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 174/356 (48%), Gaps = 20/356 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +F +++  L K    +    +   +   G  PD+  +++L++  C++G+V   + 
Sbjct: 103 PPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWF 162

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F ++L   F P+ VT+ +++ GL    R+  A  +   L      P V T+   ++GL 
Sbjct: 163 FFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLS 222

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A   F  M     + GV   PNTVTY  +IDGLCK G +D A  L   ++ +N
Sbjct: 223 KAGNLTGAYEFFDSMP----QTGV--SPNTVTYDALIDGLCKAGKLDIALGL---LRDKN 273

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
               +  ++SL+HG C A+   EA  LL  M      PNVV  N +MN LC+  ++D A 
Sbjct: 274 SQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAF 330

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM----GCKHDDFSYNIL 303
            L D+M +     +  TYN L+ G C   K+ R+ E +  +E M    GC  +  +++ L
Sbjct: 331 ELFDVMKESGCSADVITYNILLKGLC---KLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387

Query: 304 INGYCKNKEVEEALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           I G C    V +A  +Y  +   +GI P   TY  L  GL +   + R  + F +M
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 196/403 (48%), Gaps = 34/403 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTV---LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           V ++NILL  L K +        + L +R    G  P++ T+S LI   C  G+V+  + 
Sbjct: 345 VITYNILLKGLCKLRRIPEAYRHVELMRRTE--GCSPNVVTFSTLIQGLCNAGRVNQAWE 402

Query: 68  IFGRILR-SCFAPNVVTFTSLIKGLC--AESRIVEA---AALFTKLKAFG---------- 111
           ++ R++     +PN  T+  L++GLC   +SR +E      L  + ++            
Sbjct: 403 VYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVD 462

Query: 112 ------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
                 C P ++TYNTL+ GL ++G    AL L + M            P+ +T++ ++D
Sbjct: 463 FLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG------LSPDVITFNSVLD 516

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLCKE  +  A  +F +       PNVVTY++LI G       +EA  LL +MV+ G + 
Sbjct: 517 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 576

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N V+ + +++ L K G+M++A  +L  M      P+A TYNTL+DGF    ++     L 
Sbjct: 577 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 636

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G      +Y  L +G C++   +EA+ + + +  +G  P  +TY+++  GL + 
Sbjct: 637 REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 696

Query: 346 RQAERALKLFVEMQGNDVAA-DTCTYRTFIDGLCVRPQVRFTY 387
            +   AL  F +M  ++V A     Y   IDGLC   ++   Y
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 35/398 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V    +LL  L +    D     F+++  IG  PD  TY+ +++   K G++    ++
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  +P V TFT  + GL     +  A   F  +   G  PN +TY+ LI+GLC+
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL L ++  +  G            +S ++ GLC+   +++A +L   M     
Sbjct: 259 AGKLDIALGLLRDKNSQAG---------MFAFSSLLHGLCQAHRLEEAIQLLKAMP---C 306

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV + SL++G C A   +EA  L   M + G   +V++ N+++  LCK  ++  A R
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-GCKHDDFSYNILING 306
            ++LM + +   PN  T++TL+ G C  G++N+  E++  M ++ G   + F+Y  L+ G
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426

Query: 307 YCK---NKEVEEALSLYNELPFKG------------------IKPTVVTYNTLFHGLFEI 345
            CK   ++ +E+      E  ++                    +PT+VTYNTL  GL + 
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS 486

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                AL L   M  + ++ D  T+ + +DGLC   ++
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRI 524



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 127/263 (48%), Gaps = 6/263 (2%)

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           ++TYN LINGLC+ G    A   F++       I   F+P  VTYS +IDGLC++  VDK
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKA------IQFGFRPTVVTYSTVIDGLCRDNEVDK 54

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
             +L  +M      PN VTY +L++         EA  LL  M   G  P +++  +I+ 
Sbjct: 55  GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIK 114

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCK G+++ A R++D MV     P+   +  L+   C  G+++     F  +  +G   
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  +YN +++G  K   +E A  +   L      PTV T+     GL +      A + F
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF 234

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
             M    V+ +T TY   IDGLC
Sbjct: 235 DSMPQTGVSPNTVTYDALIDGLC 257



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 11/315 (3%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V +F+IL+  L      DT L LF  +   G   D+Y Y+ +IN +C  G+ S  + +
Sbjct: 752  PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +     A N VT   +IK LC   RI EA + F  +    C  + I+YNTLI  L  
Sbjct: 812  LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCR-DEISYNTLITSLVA 869

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +  +  AL L + M    G       P+   Y  ++DGL K G  + A +L  +M+    
Sbjct: 870  SRRSEQALELLRAMVADGG------SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +P++ TYT +I G   A     A     EM+ + ++P+ +  + +++  CK  K+D+A +
Sbjct: 924  SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWK 983

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LL       + P    Y+T++D  C     ++  E+   M+S  C+     +  L   Y 
Sbjct: 984  LLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYV 1040

Query: 309  KNKEVEEALSLYNEL 323
                V+EA+ L N+L
Sbjct: 1041 AEGRVDEAVKLVNDL 1055



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%)

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN L++G C  G++      F      G +    +Y+ +I+G C++ EV++   L  E+
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +G  P  VTYNTL + L    +A+ A  L   M  N    +  T+   I GLC   ++
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 384 RFTY 387
              +
Sbjct: 123 EAAF 126


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 9/381 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R +    P V ++N ++         D    L   +    + PD YTY+ LI   C  G+
Sbjct: 117 RVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGR 173

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
            +    +   +LR    P+VVT+T L++  C  S   +A  L  +++  GC P+++TYN 
Sbjct: 174 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 233

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           ++NG+C+ G    A+   K + +   E      PNTV+Y+I++ GLC     + A+EL  
Sbjct: 234 VVNGICQEGRVDDAIEFLKNLPSYGCE------PNTVSYNIVLKGLCTAERWEDAEELMG 287

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  +   PNVVT+  LI   C       A  +L ++   G  PN +S N +++  CK  
Sbjct: 288 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 347

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           KMD A   LDLMV     P+  +YNTL+   C +G+++   EL   ++  GC     SYN
Sbjct: 348 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 407

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +I+G  K  + +EAL L NE+  KG++P ++TY+T+  GL    + E A++ F ++Q  
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467

Query: 362 DVAADTCTYRTFIDGLCVRPQ 382
            +  +T  Y   I GLC R +
Sbjct: 468 GIRPNTVLYNAIILGLCKRRE 488



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L         L++   +      PD+ TY+IL+   CK       
Sbjct: 153 PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 212

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      P++VT+  ++ G+C E R+ +A      L ++GCEPN ++YN ++ G
Sbjct: 213 MKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 272

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM    G+ G    PN VT++++I  LC++G V+ A E+  Q+  
Sbjct: 273 LCTAERWEDAEELMGEM----GQKGC--PPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 326

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN ++Y  L+H FC     ++A   L  MV +G  P++VS N ++  LC++G++D 
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  +      P   +YNT++DG    GK     EL   M S G + D  +Y+ +  
Sbjct: 387 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +E+A+  + ++   GI+P  V YN +  GL + R+   A+ LF  M GN    
Sbjct: 447 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 506

Query: 366 DTCTYRTFIDGL 377
           +  TY   I+GL
Sbjct: 507 NESTYTILIEGL 518



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 29/349 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL    K   Y   + L   +   G  PD+ TY++++N  C+ G+V      
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  ++KGLC   R  +A  L  ++   GC PNV+T+N LI+ LCR
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310

Query: 129 TGHTIVALNLF-------------------------KEMTNGNGEIGVVFK----PNTVT 159
            G    AL +                          K+M      + ++      P+ V+
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++  LC+ G VD A EL  Q+K +   P +++Y ++I G   A    EA  LL EMV
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+QP++++ + I   LC+  ++++A R    +    +RPN   YN ++ G C   + +
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
              +LF  M   GC  ++ +Y ILI G      ++EA  L +EL  +G+
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 14/313 (4%)

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R++ S   P+  T  +LIK L A  R  EA  +        C P+V+ YN ++ G C  G
Sbjct: 86  RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGAG 140

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM           +P+  TY+ +I GLC  G    A  +  +M      P
Sbjct: 141 QLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVP 191

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTYT L+   C  + + +A  LL EM D+G  P++V+ NV++N +C+ G++D+A   L
Sbjct: 192 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 251

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             +      PN  +YN ++ G C   +    +EL   M   GC  +  ++N+LI+  C+ 
Sbjct: 252 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 311

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             VE AL +  ++P  G  P  ++YN L H   + ++ ++A+     M       D  +Y
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371

Query: 371 RTFIDGLCVRPQV 383
            T +  LC   +V
Sbjct: 372 NTLLTALCRSGEV 384



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + +V    +P+  +   ++ +L  +G+   A R+L     C   P+   YN ++ G+C  
Sbjct: 85  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL---AACG--PDVMAYNAMVAGYCGA 139

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++  + L   M     + D ++YN LI G C       AL++ +E+  +   P VVTY
Sbjct: 140 GQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTY 196

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L     +    ++A+KL  EM+      D  TY   ++G+C   +V
Sbjct: 197 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++  L K +  D    + +++ + G  PD  TYS +I+ +  +G++     +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PN+VT  S +  LC   R  EAA  F  + A G +P++ +Y TL++G   
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYAS 417

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVF----------------------------KPNTVT 159
            G     + LF  M +NG      VF                             P+ VT
Sbjct: 418 EGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I    + G +  A E F QM    + PN   Y+S+I GFC      +AK L+ EM+
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537

Query: 220 DQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           ++G+ +P++V  + ++N LCK+G++ +A  + DL      RP   T+N+L+DG+CL GK+
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++  ++  +ME +G + D  +YN L++GY KN  + + L+L+ E+  KG+KP  VTY  +
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF   +   A K F EM  +        Y   + GLC
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 191/374 (51%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-V 67
           P   ++NIL+ C  + +  D  L+LF  +   GL  D  T + L+ C C   +      V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLING 125
           +  R+      PN V+++ ++K LC  S    A  L   +   G  C P+V+ Y+T+I+G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
               G T  A +LF EMT          KP+ VTY++IID LCK   +DKA+ +  QM  
Sbjct: 275 FFNEGETGKACSLFHEMTRQG------VKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   P+ VTY+ +IHG+       EA  +  EM  +G+ PN+V+ N  +  LCK+G+   
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+   D M     +P+ F+Y TL+ G+   G    +  LF SM+S G   +   + ILI+
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            Y K   V++A+ ++ E+  +G+ P VVTY+T+      + +   A++ F +M    +  
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 366 DTCTYRTFIDGLCV 379
           +T  Y + I G C+
Sbjct: 509 NTAVYSSIIQGFCM 522



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 187/366 (51%), Gaps = 5/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+  LL   A    +  ++ LF  + S G+  + + ++ILI+ + K G V    +I
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   +P+VVT++++I       R+ +A   F ++ A G +PN   Y+++I G C 
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM N       + +P+ V +S +I+ LCK+G V  A ++F        
Sbjct: 523 HGGLVKAKELVSEMINKG-----IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE 577

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+T+ SLI G+C     ++A  +L  M   GV+P++V+ N +++   KNG++++   
Sbjct: 578 RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLT 637

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  V+PN  TY  ++ G    G+    ++ F  M   G       Y I++ G C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA+ L+ +L    +K ++   NT+ + ++++++ E A +LF  +  + +  +  
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 369 TYRTFI 374
           TY   I
Sbjct: 758 TYGVMI 763



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 7/351 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F IL+   AK    D  + +F  +   G+ PD+ TYS +I+ F +MG+++     F +++
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                PN   ++S+I+G C    +V+A  L +++   G   P+++ ++++IN LC+ G  
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A ++F ++    GE     +P  +T++ +IDG C  G +DKA ++   M+   + P++
Sbjct: 563 MDAHDIF-DLATDIGE-----RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +L+ G+      N+   L  EM  +GV+PN V+  +++  L + G+   A +    
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M++         Y  ++ G C     +    LF  + +M  K      N +IN   K + 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            EEA  L+  +   G+ P   TY  +   L +    E A  +F  M+ + +
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGI 787



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 199/472 (42%), Gaps = 115/472 (24%)

Query: 15  NILLGCLA-KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC--KMGQVSLGFVIFGR 71
           N LL CL   N+  + V  L  R++ +G  P+  +YSI++   C   M Q +L  +    
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
                 +P+VV ++++I G   E    +A +LF ++   G +P+V+TYN +I+ LC+   
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + ++MT    +      P+TVTYS +I G    G + +A ++F +MK   L PN
Sbjct: 316 MDKAELVLRQMTTDGAQ------PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369

Query: 192 VVT-----------------------------------YTSLIHGFCHANDWNEAKGLLI 216
           +VT                                   Y +L+HG+     + +  GL  
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNA-----------------------------S 247
            M   G+  N     ++++   K G +D+A                              
Sbjct: 430 SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489

Query: 248 RLLDL------MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--------- 292
           RL D       MV   ++PN   Y++++ GFC+ G + + KEL   M + G         
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFF 549

Query: 293 -------CK-------HDDF-------------SYNILINGYCKNKEVEEALSLYNELPF 325
                  CK       HD F             ++N LI+GYC   ++++A  + + +  
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G++P +VTYNTL  G F+  +    L LF EMQ   V  +T TY   + GL
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 146/318 (45%), Gaps = 9/318 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ ++  L K+        +F     IG  P + T++ LI+ +C +G++   F I
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P++VT+ +L+ G     RI +   LF +++  G +PN +TY  ++ GL R
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T+ A   F EM      + V        Y II+ GLC+    D+A  LF ++   N+
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSI------YGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++    ++I+         EAK L   +   G+ PN  +  V++  L K+G +++A+ 
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANN 777

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  + P +   N ++      G+I +       ++      +  + +++++ + 
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFS 837

Query: 309 KNKEVEEALSLYNELPFK 326
           +  + +E + L   LP K
Sbjct: 838 RKGKYQEDIKL---LPAK 852



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 29/276 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+         D    +   +  +G+ PD+ TY+ L++ + K G+++ G  +
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL 638

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN VT+  ++ GL    R V A   F ++   G    V  Y  ++ GLCR
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698

Query: 129 TGHTIVALNLFKEM---------TNGNGEIGVVFK--------------------PNTVT 159
                 A+ LF+++         T  N  I  ++K                    PN  T
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y ++I  L K+G V+ A  +F  M+   + P       +I       +  +A   L ++ 
Sbjct: 759 YGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD 818

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            + +     +++++++   + GK     +LL    Q
Sbjct: 819 GKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQ 854


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+    K          F  ++S  + PD+ TY+ +I+ FC++G +     +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VTFT LI G C    + +A  +   +   GC PNV+TY TLI+GLC+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM     +IG+  +PN  TY+ I++GLCK G +++A +L  + +   L
Sbjct: 469 EGDLDSANELLHEM----WKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N + VTYT+L+  +C + + ++A+ +L EM+ +G+QP +V+ NV+MN  C +G +++  +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M+   + PNA T+N+L+  +C+   +     ++  M S G   D  +Y  L+ G+C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++EA  L+ E+  KG   +V TY+ L  G  + ++   A ++F +M+   +AAD  
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702

Query: 369 TYRTFID 375
            +  F D
Sbjct: 703 IFDFFSD 709



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 186/368 (50%), Gaps = 11/368 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   G+ PD   Y+ LI+ FCK G +      F  +      P+V+T+T++I G C 
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              +VEA  LF ++   G EP+ +T+  LING C+ GH   A  +   M           
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS----- 453

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN VTY+ +IDGLCKEG +D A EL  +M    L PN+ TY S+++G C + +  EA  
Sbjct: 454 -PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+ E    G+  + V+   +M+  CK+G+MD A  +L  M+   ++P   T+N LM+GFC
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           L G +   ++L   M + G   +  ++N L+  YC    ++ A ++Y ++  +G+ P   
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
           TY  L  G  + R  + A  LF EM+G   +    TY   I G   R +       F   
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692

Query: 389 RRKGNSGN 396
           RR+G + +
Sbjct: 693 RREGLAAD 700



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 200/378 (52%), Gaps = 6/378 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+S+NI++  + +         L   +   G  PD+ +YS ++N +C+ G++   + +  
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R    PN   + S+I  LC   ++ EA   F+++   G  P+ + Y TLI+G C+ G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A   F EM + +        P+ +TY+ II G C+ G + +A +LF +M  + L P
Sbjct: 366 DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VT+T LI+G+C A    +A  +   M+  G  PNVV+   +++ LCK G +D+A+ LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++PN FTYN++++G C +G I    +L    E+ G   D  +Y  L++ YCK+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            E+++A  +  E+  KG++PT+VT+N L +G       E   KL   M    +A +  T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599

Query: 371 RTFIDGLCVRPQVRFTYA 388
            + +   C+R  ++   A
Sbjct: 600 NSLVKQYCIRNNLKAATA 617



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 197/370 (53%), Gaps = 7/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYD-TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V S N+ L  L+K+ +   T + +F+    +G+  ++ +Y+I+I+  C++G++     + 
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +    + P+V+++++++ G C    + +   L   +K  G +PN   Y ++I  LCR 
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A   F EM       G++  P+TV Y+ +IDG CK G +  A + F +M   ++ 
Sbjct: 330 CKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V+TYT++I GFC   D  EA  L  EM  +G++P+ V+   ++N  CK G M +A R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            + M+Q    PN  TY TL+DG C  G ++   EL   M  +G + + F+YN ++NG CK
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  +EEA+ L  E    G+    VTY TL     +  + ++A ++  EM G  +     T
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563

Query: 370 YRTFIDGLCV 379
           +   ++G C+
Sbjct: 564 FNVLMNGFCL 573



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 46/360 (12%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P V ++  ++    +         LF  +   GL PD  T++ LIN +CK G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              F +   ++++  +PNVVT+T+LI GLC E  +  A  L  ++   G +PN+ TYN++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497

Query: 123 INGLCRTGHTIVALNLFKEMTNG------------------NGE-----------IGVVF 153
           +NGLC++G+   A+ L  E                      +GE           +G   
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P  VT++++++G C  G ++  ++L   M  + + PN  T+ SL+  +C  N+   A  
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +  +M  +GV P+  +   ++   CK   M  A  L   M       +  TY+ L+ GF 
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K    +E+F  M   G   D                 +E    +++  +KG +P  +
Sbjct: 678 KRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDTI 720



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 1/176 (0%)

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           EA+ +  +M++ G+  +V S NV +  L K+  K   A  +     +  V  N  +YN +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   C  G+I     L + ME  G   D  SY+ ++NGYC+  E+++   L   +  KG+
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           KP    Y ++   L  I +   A + F EM    +  DT  Y T IDG C R  +R
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 192/379 (50%), Gaps = 12/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +    LFK +   G+ PD+YTY+ILI+CF K G +      
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P VVT+T+LI       ++  A  LF  + A GC PNVITY  LI+G C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +G+   A  ++  M  G+ +I            V  KPN VTY  ++DGLCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  +   PN + Y +LI GFC A   +EA+ +  +MV+ G  PNV + + +++ L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D   ++L  M++    PN   Y  ++DG     K +   +L + ME  GCK + 
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K  +V++ L L+ E+  KG  P  VTY  L +        + A  L  E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 358 MQGNDVAADTCTYRTFIDG 376
           M+         +Y   I+G
Sbjct: 846 MKQTYWPKHVSSYCKVIEG 864



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 178/385 (46%), Gaps = 22/385 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     ++    +   +   G  PD  TYS +I   C   +V   F +F  +  +   P
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI        I +A     ++   GCEP V+TY TLI+   +     VA  LF
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN------------ 187
           + M      I     PN +TY+ +IDG CK G ++KA +++ +M+ +             
Sbjct: 583 ELM------IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636

Query: 188 ----LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 PNVVTY +L+ G C A+   +A+ LL  M   G +PN +  + +++  CK  K+
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  +   MV+    PN +TY++L+D      +++ V ++   M    C  +   Y  +
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G  K  + +EA  L   +  KG KP VVTY  +  G  +  + ++ L+LF EM     
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 364 AADTCTYRTFIDGLCVRPQVRFTYA 388
           A +  TY   I+  C    +   YA
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYA 841



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 185/404 (45%), Gaps = 34/404 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + + G FP++ TY+ LI+ +CK G +     I
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616

Query: 69  FGRI--------------LRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+              +++  A  PNVVT+ +L+ GLC   ++ +A  L   +   GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           EPN I Y+ LI+G C+      A  +F +M          + PN  TYS +ID L K+  
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG------YNPNVYTYSSLIDRLFKDKR 730

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D   ++  +M   +  PN+V YT +I G       +EA  L++ M ++G +PNVV+   
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K GK+D    L   M      PN  TY  L++  C TG ++    L   M+   
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
                 SY  +I GY   +E   +L L  E+   G  P ++ Y  L     +  + E AL
Sbjct: 851 WPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 353 KLFVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNS 394
           +L  E+      +AA    Y + I          F+YA + G++
Sbjct: 909 ELHKEVISASMSMAAKKNLYTSLI--------YSFSYASKIGHA 944



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 73/431 (16%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSI----GLFPDLYTYSILINCFCKMGQVS 63
           P V ++ ILL GCL K +     L   KR+ S+    G +P    ++ L++ +CK    S
Sbjct: 341 PNVQTYRILLCGCLNKKQ-----LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALFTKL 107
             + +  ++ +    P  V +  LI  +C                A + ++ A  +  K+
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 108 ----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
                           KA+         G  P+  TY+ +I  LC       A  LFKEM
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                  GVV  P+  TY+I+ID   K G + +A     +M  +   P VVTYT+LIH +
Sbjct: 516 KG----TGVV--PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV-QCDV--- 258
             A   + A  L   M+ +G  PNV++   +++  CK+G ++ A ++   M    D+   
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDV 629

Query: 259 ------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                       +PN  TY  L+DG C   K+   ++L  +M   GC+ +   Y+ LI+G
Sbjct: 630 DMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDG 689

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA  +++++   G  P V TY++L   LF+ ++ +  LK+  +M  N  A +
Sbjct: 690 FCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPN 749

Query: 367 TCTYRTFIDGL 377
              Y   IDGL
Sbjct: 750 IVIYTEMIDGL 760



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 10/317 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    ++ L+    K    D    +F ++   G  P++YTYS LI+   K  ++ L   +
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L +  APN+V +T +I GL   ++  EA  L   ++  GC+PNV+TY  +I+G  +
Sbjct: 738 LSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGK 797

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L LF+EM    G  G    PN VTY+++I+  C  G +D+A  L  +MK    
Sbjct: 798 AGKVDKCLELFREM----GSKGCA--PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 851

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V +Y  +I G+    ++  + GLL E+   G  P ++   V+++   K G+++ A  
Sbjct: 852 PKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALE 909

Query: 249 LLDLMVQCDVRPNAFT--YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           L   ++   +   A    Y +L+  F    KI    ELF  M   G   D  ++  L+ G
Sbjct: 910 LHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMG 969

Query: 307 YCKNKEVEEALSLYNEL 323
             + +  EEAL L + L
Sbjct: 970 LIRVRRWEEALQLSDSL 986



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 177/462 (38%), Gaps = 101/462 (21%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    DT   + + ++ +GL  D +T        CK+G+      +
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              I +  F PN + +  +I GLC  S   EA     ++++  C PNV TY         
Sbjct: 299 ---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C++     A  L K+M           
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC------ 409

Query: 154 KPNTVTYSIIIDGLCKEGFV---------------------------------------- 173
           KP  V Y+I+I  +C  G +                                        
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 174 -DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            +KA ++  +M      P+  TY+ +I   C+A+    A  L  EM   GV P+V +  +
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++   K G +  A   LD MV+    P   TY TL+  +    K++   ELF  M + G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYN-----------ELPFK-----GIKPTVVTYN 336
           C  +  +Y  LI+GYCK+  +E+A  +Y            ++ FK       KP VVTY 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  GL +  + + A  L   M  +    +T  Y   IDG C
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 15/331 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +LI   C+ G  ++     GR+    + P  +T+ +L++      ++  A  +  ++   
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   +  T       LC+ G    AL+L ++           F PNT+ Y+ +I GLC+ 
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEKED---------FVPNTILYNKMISGLCEA 321

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
            F ++A +   +M+  +  PNV TY  L+ G  +       K +L  M+ +G  P+    
Sbjct: 322 SFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIF 381

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI------NRVKEL 284
           N +++  CK+     A +LL  M +C+ +P    YN L+   C  G++         ++ 
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 441

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M S G   +  +        C   + E+A  + +E+   G  P   TY+ +   L  
Sbjct: 442 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 501

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             + E A  LF EM+G  V  D  TY   ID
Sbjct: 502 ASRVENAFFLFKEMKGTGVVPDVYTYTILID 532



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 29/283 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++ L+  L K+K  D VL +  ++      P++  Y+ +I+   K+ +   
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     ++ +   LF ++ + GC PN +TY  LIN
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828

Query: 125 GLCRTGHTIVALNLFKEMTN-----------------------GNGEIGVVFK----PNT 157
             C TGH   A  L +EM                           G +  V K    P  
Sbjct: 829 HCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPII 888

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT--YTSLIHGFCHANDWNEAKGLL 215
           + Y ++ID   K G ++ A EL  ++   +++       YTSLI+ F +A+    A  L 
Sbjct: 889 LLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELF 948

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
            +M+  GV P++ +   ++  L +  + + A +L D + Q D+
Sbjct: 949 YDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           NV++ + C+NG  + A   L  +     +P   TYN L+  F    K++  + +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +G   D+F+        CK  +  EALSL  +  F    P  + YN +  GL E    E 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNKMISGLCEASFFEE 326

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A+     M+      +  TYR  + G   + Q+
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 3/190 (1%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI   C    WN A   L  + D G +P  ++ N ++    +  K+D A  +   M +  
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +  + FT        C   K+ + +E    +E      +   YN +I+G C+    EEA+
Sbjct: 272 LSMDEFTLGFFAQALC---KVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              N +      P V TY  L  G    +Q  R  ++   M           + + +   
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 378 CVRPQVRFTY 387
           C      + Y
Sbjct: 389 CKSDDFSYAY 398


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P    +  L+    K          F  ++S  + PD+ TY+ +I+ FC++G +     +
Sbjct: 792  PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  +      P+ VTFT LI G C    + +A  +   +   GC PNV+TY TLI+GLC+
Sbjct: 852  FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  L  EM     +IG+  +PN  TY+ I++GLCK G +++A +L  + +   L
Sbjct: 912  EGDLDSANELLHEM----WKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            N + VTYT+L+  +C + + ++A+ +L EM+ +G+QP +V+ NV+MN  C +G +++  +
Sbjct: 966  NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LL+ M+   + PNA T+N+L+  +C+   +     ++  M S G   D  +Y  L+ G+C
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 1085

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            K + ++EA  L+ E+  KG   +V TY+ L  G  + ++   A ++F +M+   +AAD  
Sbjct: 1086 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 1145

Query: 369  TYRTFID 375
             +  F D
Sbjct: 1146 IFDFFSD 1152



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 186/368 (50%), Gaps = 11/368 (2%)

Query: 34   FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
            F  +   G+ PD   Y+ LI+ FCK G +      F  +      P+V+T+T++I G C 
Sbjct: 782  FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841

Query: 94   ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
               +VEA  LF ++   G EP+ +T+  LING C+ GH   A  +   M           
Sbjct: 842  IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS----- 896

Query: 154  KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             PN VTY+ +IDGLCKEG +D A EL  +M    L PN+ TY S+++G C + +  EA  
Sbjct: 897  -PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 214  LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            L+ E    G+  + V+   +M+  CK+G+MD A  +L  M+   ++P   T+N LM+GFC
Sbjct: 956  LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015

Query: 274  LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            L G +   ++L   M + G   +  ++N L+  YC    ++ A ++Y ++  +G+ P   
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075

Query: 334  TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
            TY  L  G  + R  + A  LF EM+G   +    TY   I G   R +       F   
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135

Query: 389  RRKGNSGN 396
            RR+G + +
Sbjct: 1136 RREGLAAD 1143



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 11   VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            V+S+NI++  + +         L   +   G  PD+ +YS ++N +C+ G++   + +  
Sbjct: 689  VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748

Query: 71   RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             + R    PN   + S+I  LC   ++ EA   F+++   G  P+ + Y TLI+G C+ G
Sbjct: 749  VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808

Query: 131  HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                A   F EM + +        P+ +TY+ II G C+ G + +A +LF +M  + L P
Sbjct: 809  DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 862

Query: 191  NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            + VT+T LI+G+C A    +A  +   M+  G  PNVV+   +++ LCK G +D+A+ LL
Sbjct: 863  DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922

Query: 251  DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
              M +  ++PN FTYN++++G C +G I    +L    E+ G   D  +Y  L++ YCK+
Sbjct: 923  HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982

Query: 311  KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             E+++A  +  E+  KG++PT+VT+N L +G       E   KL   M    +A +  T+
Sbjct: 983  GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042

Query: 371  RTFIDGLCVR 380
             + +   C+R
Sbjct: 1043 NSLVKQYCIR 1052



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 197/370 (53%), Gaps = 7/370 (1%)

Query: 11   VSSFNILLGCLAKNKHYD-TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
            V S N+ L  L+K+ +   T + +F+    +G+  ++ +Y+I+I+  C++G++     + 
Sbjct: 653  VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 712

Query: 70   GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
              +    + P+V+++++++ G C    + +   L   +K  G +PN   Y ++I  LCR 
Sbjct: 713  LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 772

Query: 130  GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                 A   F EM       G++  P+TV Y+ +IDG CK G +  A + F +M   ++ 
Sbjct: 773  CKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826

Query: 190  PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            P+V+TYT++I GFC   D  EA  L  EM  +G++P+ V+   ++N  CK G M +A R+
Sbjct: 827  PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886

Query: 250  LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
             + M+Q    PN  TY TL+DG C  G ++   EL   M  +G + + F+YN ++NG CK
Sbjct: 887  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 946

Query: 310  NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            +  +EEA+ L  E    G+    VTY TL     +  + ++A ++  EM G  +     T
Sbjct: 947  SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006

Query: 370  YRTFIDGLCV 379
            +   ++G C+
Sbjct: 1007 FNVLMNGFCL 1016



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 29/320 (9%)

Query: 33   LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
            LF  +   GL PD  T++ LIN +CK G +   F +   ++++  +PNVVT+T+LI GLC
Sbjct: 851  LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910

Query: 93   AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG------- 145
             E  +  A  L  ++   G +PN+ TYN+++NGLC++G+   A+ L  E           
Sbjct: 911  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970

Query: 146  -----------NGE-----------IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                       +GE           +G   +P  VT++++++G C  G ++  ++L   M
Sbjct: 971  TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030

Query: 184  KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              + + PN  T+ SL+  +C  N+   A  +  +M  +GV P+  +   ++   CK   M
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090

Query: 244  DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
              A  L   M       +  TY+ L+ GF    K    +E+F  M   G   D   ++  
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150

Query: 304  INGYCKNKEVEEALSLYNEL 323
             +   K K  +  +   +E+
Sbjct: 1151 SDTKYKGKRPDTIVDPIDEI 1170



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 1/177 (0%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNASRLLDLMVQCDVRPNAFTYNT 267
            EA+ +  +M++ G+  +V S NV +  L K+  K   A  +     +  V  N  +YN 
Sbjct: 635 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 694

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++   C  G+I     L + ME  G   D  SY+ ++NGYC+  E+++   L   +  KG
Sbjct: 695 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +KP    Y ++   L  I +   A + F EM    +  DT  Y T IDG C R  +R
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N LL    + K       LFK        PD  TYS LIN FCK       + +   + +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+   + ++IKGLC   R+  A   +  ++   C P+VITY  L++ LC++     
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  + ++M     E G    PN VTY+ +I+G CK G +D+A  LF QM   + +P+V T
Sbjct: 121 ASLILEDMI----EAGCA--PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI G+C      +   LL EMV  G +PN ++ N +M+ L K+GK  +A  L  +M+
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           + D +P+ FT+N ++D FC  G+++   ELF  M   GC  D ++YNI+I+G C+   ++
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A  L   +   G  P VVTYN++  GL +  Q + A +++  ++      D  T  T I
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 375 DGLC 378
           DGLC
Sbjct: 355 DGLC 358



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 191/380 (50%), Gaps = 7/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+    K + +     L   +   G+ P    Y+ +I   C  G+V    V 
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + R C AP+V+T+T L+  LC  +RI +A+ +   +   GC PNV+TYNTLING C+
Sbjct: 91  YRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF +M   +        P+  TY+I+IDG CK+       +L  +M     
Sbjct: 150 LGNMDEAVVLFNQMLENSCS------PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY +L+     +  + +A  L   M+ +  +P+  + N++++  CK G++D A  
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  LM      P+ +TYN ++ G C   +I+  ++L   M   GC  D  +YN +++G C
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V+EA  +Y  L   G    VVT +TL  GL + R+ + A KL  EM+ N  A D  
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 383

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            Y   I G C   Q+  + A
Sbjct: 384 AYTILIHGFCKADQLDKSLA 403



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 181/356 (50%), Gaps = 32/356 (8%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           RH  PS   V ++ IL+  L K+        + + +   G  P++ TY+ LIN FCK+G 
Sbjct: 96  RHCAPS---VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 152

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +    V+F ++L +  +P+V T+  LI G C + R  + A L  ++  +GCEPN ITYNT
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212

Query: 122 LINGLCRTGHTIVALNLFKEMTNGN------------------GEIGVVFK--------- 154
           L++ L ++G  I A NL + M   +                  G++ + ++         
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272

Query: 155 --PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+  TY+I+I G C+   +D A++L  +M      P+VVTY S++ G C A+  +EA 
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +   + + G   +VV+ + +++ LCK+ ++D+A +LL  M +    P+   Y  L+ GF
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           C   ++++    F  M   GC     +Y+I+I+  CK+  V +   L   +  +G+
Sbjct: 393 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 193/377 (51%), Gaps = 10/377 (2%)

Query: 5   HPS-PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP+  P   S+ +L+  L  ++  D  + L + + S G+  D+ TY  LI   C   +V 
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               + G +  S   PNVV ++SL++G C   R  +   +F ++   G EP+V+ Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           + LC+ G    A  +   M           +PN VTY+++I+ +CKEG V +A  +  +M
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRG------LEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNG 241
             + + P+VVTY +LI G     + +EA  LL EMV     V+PNVV+ N ++  LC  G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           +M  A ++  +M +     N  TYN L+ G     K+ +  EL   M S+G + D F+Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI G+CK  +V+ A  L + +  +GI+P +  Y  L   + E    ERA  LF EM  N
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-N 460

Query: 362 DVAADTCTYRTFIDGLC 378
           +   D   Y T I G C
Sbjct: 461 NFPLDVVAYSTMIHGAC 477



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 175/356 (49%), Gaps = 19/356 (5%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-------CFAPNVVTFTSLIK 89
           L+++    D  +Y+ ++   C+ G         G +LR+          PN V++T L++
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRA----GALLRAMSLEPHPACRPNAVSYTVLMR 123

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
            LCA+    +A  L   +++ G   +V+TY TLI GLC       A+ L  EM     E 
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ES 179

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+  +PN V YS ++ G CK G  +   ++F++M  + + P+VV YT LI   C      
Sbjct: 180 GI--EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A G++  MV +G++PNVV+ NV++N +CK G +  A  +L  M +  V P+  TYNTL+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 270 DGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
            G     +++    L   M       K +  ++N +I G C    + +A  +   +   G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +VTYN L  GL  + +  +A++L  EM    +  D+ TY   I G C   QV
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 13/311 (4%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAF---GCEPNVITYNTLINGLCRTGHTIVAL 136
           + V++ +++  LC       A AL   +       C PN ++Y  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L + M +         + + VTY  +I GLC    VDKA EL  +M    + PNVV Y+
Sbjct: 136 GLLRSMRSAG------VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SL+ G+C +  W +   + +EM ++G++P+VV    +++ LCK GK   A  ++D+MV+ 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PN  TYN L++  C  G +     +   M   G   D  +YN LI G     E++EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 317 LSLYNELPFKG---IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + L  E+  +G   +KP VVT+N++  GL +I +  +A ++   M+      +  TY   
Sbjct: 310 MWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 374 IDGLCVRPQVR 384
           I GL    +VR
Sbjct: 369 IGGLLRVHKVR 379



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA +L   L +     + ++YNT++  LCR GH   A  L + M+    E     +PN V
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAV 116

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y++++  LC +   D+A  L   M+   +  +VVTY +LI G C A + ++A  L+ EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            + G++PNVV  + ++   CK+G+ ++  ++   M +  + P+   Y  L+D  C  GK 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +   +   M   G + +  +YN+LIN  CK   V+EA+ +  ++  KG+ P VVTYNTL
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 339 FHGLFEIRQAERALKLFVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
             GL ++ + + A+ L  EM    N V  +  T+ + I GLC   ++R  +  R
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 9/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+ C+ K       + + K+++  G+ PD+ TY+ LI     + ++     +
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 69  FGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              ++R  +   PNVVTF S+I+GLC   R+ +A  +   ++  GC  N++TYN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R      A+ L  EMT+      +  +P++ TYSI+I G CK   VD+A++L   M+  
Sbjct: 373 LRVHKVRKAMELMDEMTS------LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P +  Y  L+   C       A+ L  EM D     +VV+ + +++  CK G +  A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             LL  +V   + P+A TY+ +++ F  +G +     +   M + G   D   ++ LI G
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG 545

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           Y    E+ + L L  E+  K I       +TL   L    + +  L+
Sbjct: 546 YSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQ 592



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V +++ ++    K     T   L K +   GL PD  TYSI+IN F K G +     
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRI 97
           +  ++  S F P+V  F SLI+G   +  I
Sbjct: 523 VLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 202/398 (50%), Gaps = 33/398 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             + ++G+ P++ TY+ +I+ +C  G+V    ++  
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+  T+ SLI G+C   ++ EA+ +  K+K  G  P  +TYNTLI+G C  G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 131 HTIVALN-----------------------LFKE--------MTNGNGEIGVVFKPNTVT 159
             + A                         LF E        M    G+ G+V  P+++T
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV--PDSIT 413

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+I+G C+ G   KA  L  +M  + + P +VTYTSLI+     N    A  L  +++
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+++  N +++  C NG +D A  LL  M + ++ P+  TYNTLM G C  GK+ 
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +EL   M+  G + D  SYN LI+GY K  ++ +A ++ +E+   G  PT++TYN L 
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL + +Q + A +L  EM    +  D  TY + I+G+
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN +L    K    +TV  L+  +  + +   +YT++I+IN  CK G++      
Sbjct: 199 PKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDF 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      PNVVT+ ++I G C+  R+  A  +   +K  G EP+  TY +LI+G+C+
Sbjct: 259 IGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCK 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + ++M     EIG++  P  VTY+ +IDG C +G + KA     +M    +
Sbjct: 319 GGKLEEASGILEKMK----EIGLL--PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TY  LIH        +EA G++ +M D G+ P+ ++ N+++N  C+ G    A  
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFN 432

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P   TY +L+       ++    +LF  +   G   D   +N LI+G+C
Sbjct: 433 LHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHC 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  ++ A +L  E+  + I P  VTYNTL  G     + E A +L  EM+   +  D  
Sbjct: 493 ANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHI 552

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   R  +   +  R
Sbjct: 553 SYNTLISGYSKRGDINDAFTIR 574



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  + K    +    + +++  IGL P   TY+ LI+ +C  G +   F  
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P V T+  LI  L  E ++ EA  +   +   G  P+ ITYN LING CR
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A NL  EM      I    +P  VTY+ +I  L K   +  A +LF ++  E  
Sbjct: 424 CGNAKKAFNLHDEM------ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+++ + +LI G C   + + A  LL EM  + + P+ V+ N +M   C+ GK++ A  
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  +RP+  +YNTL+ G+   G IN    +   M S+G      +YN LI G C
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           KN++ + A  L  E+  KGI P   TY +L  G+ ++  +  A
Sbjct: 598 KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 6/340 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +LI   C++ +    F  F  +      P + TF +++      ++      L+ ++ 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
               +  V T+N +IN LC+ G    A +    M N    +GV  KPN VTY+ +I G C
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMEN----LGV--KPNVVTYNTVIHGYC 282

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
             G V+ A+ +   MK   + P+  TY SLI G C      EA G+L +M + G+ P  V
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +++  C  G +  A    D MV+  + P   TYN L+    L GK++    +   M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   D  +YNILINGYC+    ++A +L++E+  KGI+PT+VTY +L + L +  + 
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           + A  LF ++     + D   +   IDG C    +   +A
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 3/241 (1%)

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           ++F E+      +G     +++ + ++I   C+    D A E F  MK + + P + T+ 
Sbjct: 149 DVFHELAITRDRLGT---KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +++  F   N       L  EM    ++  V + N+++N LCK GK+  A   +  M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            V+PN  TYNT++ G+C  G++   + +   M++ G + D ++Y  LI+G CK  ++EEA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +  ++   G+ PT VTYNTL  G        +A     EM    +     TY   I  
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385

Query: 377 L 377
           L
Sbjct: 386 L 386



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 92/186 (49%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + +  LI   C     ++A      M ++GV P + + N +++   K  + +    L   
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++   +T+N +++  C  GK+ + K+   SME++G K +  +YN +I+GYC    
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           VE A  + + +  +G++P   TY +L  G+ +  + E A  +  +M+   +     TY T
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 373 FIDGLC 378
            IDG C
Sbjct: 347 LIDGYC 352


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 10/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + K    D  + +F+ +      PD++TY  L++  CK  ++    ++
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + +  CF P+ VTF  LI GLC +  +V    L   +   GC PN +TYNT+INGLC
Sbjct: 246 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++L   M      +     PN VTY  +I+GL K+G       L   ++   
Sbjct: 305 LKGKLDKAVSLLDRM------VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + N   Y++LI G        EA GL  +MV++G QPN+V  + +++ LC+ GK+D A 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  MV     PNAFTY++L+ GF  TG   +   ++  M    C  ++  Y++LI+G 
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAA 365
           C++ ++ EA+ ++  +  +G++P VV Y+++ HGL      E  LKLF EM  Q +D   
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 366 DTCTYRTFIDGLC 378
           D  TY   +  LC
Sbjct: 539 DVVTYNILLRALC 551



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 181/372 (48%), Gaps = 10/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFV 67
           P V ++  L+  L K    D  + L   +   G FP   T+++LIN  CK G  V +  +
Sbjct: 221 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 280

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +    L+ C  PN VT+ ++I GLC + ++ +A +L  ++ A  C PN +TY TLINGL 
Sbjct: 281 VDNMFLKGC-VPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G ++  ++L   +             N   YS +I GL KE   ++A  L+ +M  + 
Sbjct: 340 KQGRSVDGVHLLSSLEERG------HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+V Y++LI G C     +EAK +L EMV++G  PN  + + ++    K G    A 
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+   M + +  PN   Y+ L+ G C  GK+     ++  M   G + D  +Y+ +I+G 
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 308 CKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           C    VE  L L+NE+  +    +P VVTYN L   L +      A+ L   M       
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573

Query: 366 DTCTYRTFIDGL 377
           D  T   F++ L
Sbjct: 574 DLITCNIFLNAL 585



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 173/349 (49%), Gaps = 8/349 (2%)

Query: 33  LFKRLNSIGLFP--DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           +FK  + +G +   D   YS++ N +   G     F +F R+ R         F  + + 
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIEN-YANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRA 124

Query: 91  LCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
                   +A  LF ++   F C   V ++N+++N + + G    AL  ++    G   I
Sbjct: 125 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI 184

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                PN ++++++I  +CK G VD+A E+F +M  +   P+V TY +L+ G C  +  +
Sbjct: 185 S----PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL EM  +G  P+ V+ NV++N LCK G M   ++L+D M      PN  TYNT++
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G CL GK+++   L   M +  C  +D +Y  LING  K     + + L + L  +G  
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                Y+TL  GLF+  ++E A+ L+ +M       +   Y   IDGLC
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 409



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 162/307 (52%), Gaps = 6/307 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           +PNV++F  +IK +C    +  A  +F ++    CEP+V TY TL++GLC+      A+ 
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L  EM     +I   F P++VT++++I+GLCK+G + +  +L   M  +   PN VTY +
Sbjct: 245 LLDEM-----QIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I+G C     ++A  LL  MV     PN V+   ++N L K G+  +   LL  + +  
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
              N + Y+TL+ G     K      L+  M   GC+ +   Y+ LI+G C+  +++EA 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  E+  KG  P   TY++L  G F+   +++A++++ EM  N+   +   Y   I GL
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 378 CVRPQVR 384
           C   ++R
Sbjct: 479 CEDGKLR 485



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 29/292 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+  L K +  +  + L+K++   G  P++  YS LI+  C+ G++     I   +
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN  T++SLIKG        +A  ++ ++    C PN I Y+ LI+GLC  G  
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM--KYENLNP 190
             A+ ++  M      +G   +P+ V YS +I GLC  G V+   +LF +M  +  +  P
Sbjct: 485 REAMMMWTHM------LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--------------- 235
           +VVTY  L+   C  N  + A  LL  M+D+G  P++++ N+ +N               
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF 598

Query: 236 ------ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
                  L K  ++  A++++++M+Q  + PNA T+  ++   C   K+  +
Sbjct: 599 LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 650



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 3/234 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K    T+  +I+     G      ++F +MK E        +  +   +  A+   +A 
Sbjct: 76  YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAI 135

Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV--QCDVRPNAFTYNTLM 269
            L   MVD+   +  V S N ++N + + G    A    +  V  + ++ PN  ++N ++
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVI 195

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
              C  G ++R  E+F  M    C+ D F+Y  L++G CK   ++EA+ L +E+  +G  
Sbjct: 196 KAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF 255

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           P+ VT+N L +GL +     R  KL   M       +  TY T I+GLC++ ++
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 195/358 (54%), Gaps = 7/358 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH    P  VS F+ L+G  A+    D  ++  + +   GL PD   Y+++I  FC+ G
Sbjct: 226 MRHRGIKPDLVS-FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 284

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +S    +   ++     P+VVT+ +L+ GLC E R+++A  L  +++  G  P++ T+ 
Sbjct: 285 LMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFT 344

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G C  G    AL LF  M N         +P+ VTY+ +IDG+C++G +DKA +L+
Sbjct: 345 TLIHGYCIEGKLDKALQLFDTMLNQR------LRPDIVTYNTLIDGMCRQGDLDKANDLW 398

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    + PN VTY+ LI   C      +A G L EM+++G+ PN+++ N I+   C++
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +    + L  M+   V P+  TYNTL+ G+    K++   +L   ME    + D  +Y
Sbjct: 459 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           N+LING+  +  V+EA  ++ ++  KGI+P   TY ++ +G      ++ A +L  EM
Sbjct: 519 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 198/376 (52%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N +L  L ++  +D    +FK ++  G+ PD+ +++ILI  FC++G++     I
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +      P++V+F+ LI       ++  A A   +++ FG  P+ + Y  +I G CR
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +  EM      +G    P+ VTY+ +++GLCKE  +  A+ L  +M+   +
Sbjct: 283 AGLMSDALRVRDEM------VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+T+LIHG+C     ++A  L   M++Q ++P++V+ N +++ +C+ G +D A+ 
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M   ++ PN  TY+ L+D  C  G++         M + G   +  +YN +I GYC
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  V +      ++    + P ++TYNTL HG  +  +   A KL   M+   V  D  
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   I+G  V   V+
Sbjct: 517 TYNMLINGFSVHGNVQ 532



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 201/370 (54%), Gaps = 10/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SF IL+G   +    +  L ++K +   G+ PDL ++S LI  F + G++      
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA- 256

Query: 69  FGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           + R +R CF   P+ V +T +I G C    + +A  +  ++   GC P+V+TYNTL+NGL
Sbjct: 257 YLREMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+    + A  L  EM     E GV   P+  T++ +I G C EG +DKA +LF  M  +
Sbjct: 316 CKERRLLDAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 369

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P++VTY +LI G C   D ++A  L  +M  + + PN V+ +++++  C+ G++++A
Sbjct: 370 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
              LD M+   + PN  TYN+++ G+C +G +++ ++    M       D  +YN LI+G
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K  ++ +A  L N +  + ++P VVTYN L +G       + A  +F +M    +  D
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 549

Query: 367 TCTYRTFIDG 376
             TY + I+G
Sbjct: 550 RYTYMSMING 559



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 198/393 (50%), Gaps = 29/393 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++    K   +D V ++   +    +FPD+ T++++++   + G       +   +
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P +VT+ S++KGLC      +A  +F ++  FG  P+V ++  LI G CR G  
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 133 IVALNLFKEMTNGNGE---------IGVVFK--------------------PNTVTYSII 163
             AL ++KEM +   +         IG+  +                    P+ V Y+++
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G C+ G +  A  +  +M      P+VVTY +L++G C      +A+GLL EM ++GV
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P++ +   +++  C  GK+D A +L D M+   +RP+  TYNTL+DG C  G +++  +
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L+  M S     +  +Y+ILI+ +C+  +VE+A    +E+  KGI P ++TYN++  G  
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                 +  K   +M  N V+ D  TY T I G
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N  T   ++   C      +  A+ ++++     P+V+T+N +++   R G    A+ L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
             M +         KP  VTY+ ++ GLC+ G  DKA E+F +M    + P+V ++T LI
Sbjct: 154 DSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 207

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            GFC   +  EA  +  EM  +G++P++VS + ++    + GKMD+A   L  M    + 
Sbjct: 208 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 267

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+   Y  ++ GFC  G ++    +   M   GC  D  +YN L+NG CK + + +A  L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            NE+  +G+ P + T+ TL HG     + ++AL+LF  M    +  D  TY T IDG+C
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 6/280 (2%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           AA  +  + +   E N  T N +++  C+         +  EM     E   VF P+ VT
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-----EKRCVF-PDVVT 132

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +++++D   + G  + A  L   M  + L P +VTY S++ G C +  W++A  +  EM 
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D GV P+V S  +++   C+ G+++ A ++   M    ++P+  +++ L+  F   GK++
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                   M   G   D   Y ++I G+C+   + +AL + +E+   G  P VVTYNTL 
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +GL + R+   A  L  EM+   V  D CT+ T I G C+
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCI 352



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 7/250 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  + +    D    L+  ++S  +FP+  TYSILI+  C+ GQV   F  
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN++T+ S+IKG C    + +      K+      P++ITYNTLI+G  +
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   M           +P+ VTY+++I+G    G V +A  +F +M  + +
Sbjct: 493 EDKMHDAFKLLNMMEKEK------VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY S+I+G   A +  EA  L  EM+ +G +    +  V    + +N        
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNI-QNSAESLKQM 605

Query: 249 LLDLMVQCDV 258
            +DL V C +
Sbjct: 606 PMDLKVTCSI 615


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 197/378 (52%), Gaps = 8/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R M P P  V+   ++ G  A+ +    +  + +     G+ PD YTY+ LI+ +CK+G
Sbjct: 139 LRQM-PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 61  QVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           ++     +F  +L +   AP+ V + +LI G C   ++  A      +   G    V TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N L++ L        A  + +EM   NG     F P+  TY+I+I+G CKEG   KA E+
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQK-NG-----FSPDVFTYNILINGYCKEGNEKKALEV 311

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +M  + +    VTYTSLI+ F       E   L    V +G++P+VV  N ++N  C 
Sbjct: 312 FEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCT 371

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G M+ A  ++  M +  + P+  TYNTLM GFCL G+++  + L   M   G + D  S
Sbjct: 372 GGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVS 431

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI+GY    ++++AL + +E+  KG  PT++TYN L  GL +IRQ + A  L  EM 
Sbjct: 432 YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV 491

Query: 360 GNDVAADTCTYRTFIDGL 377
              +  D  TY + I+GL
Sbjct: 492 AKGITPDDSTYISLIEGL 509



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 12/369 (3%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     +   
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 72  IL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRT 129
           +  R   AP+  T+ +LI G C   R+ +A  +F ++   G   P+ + YN LI G C  
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G   VAL   ++M     + G+       TY++++  L  +     A  +  +M+    +
Sbjct: 233 GKLDVALQYREDMV----QRGIAM--TVATYNLLMHALFMDARASDAYAVLEEMQKNGFS 286

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V TY  LI+G+C   +  +A  +  EM  +GV+   V+   ++    + G++    RL
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            ++ V+  +RP+   YN L++  C  G + R  E+   ME      DD +YN L+ G+C 
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              ++EA +L +E+  +GI+P +V+YNTL  G       + AL++  EM          T
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466

Query: 370 YRTFIDGLC 378
           Y   I GLC
Sbjct: 467 YNALIQGLC 475



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 174/378 (46%), Gaps = 14/378 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+S + LL  L     +    +LF  +  + L     T++I++   C  G+      
Sbjct: 82  PIPVASLHPLLSSLPSAPAF----ALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRAL- 136

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGL 126
               +LR    PN VT+ ++I G CA  R+  A  +  +++  G   P+  TY TLI+G 
Sbjct: 137 ---ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGW 193

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A+ +F EM    GE+     P+ V Y+ +I G C  G +D A +    M   
Sbjct: 194 CKIGRMEDAVKVFDEMLT-KGEVA----PSAVMYNALIGGYCDVGKLDVALQYREDMVQR 248

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +   V TY  L+H        ++A  +L EM   G  P+V + N+++N  CK G    A
Sbjct: 249 GIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKA 308

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + + M Q  VR  A TY +L+  F   G++     LF      G + D   YN LIN 
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS 368

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C   ++E A  +  E+  K I P  +TYNTL  G   + + + A  L  EM    +  D
Sbjct: 369 HCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428

Query: 367 TCTYRTFIDGLCVRPQVR 384
             +Y T I G  ++  ++
Sbjct: 429 LVSYNTLISGYSMKGDIK 446



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-E 289
           N+++  LC  GK     R L+L+ Q   RPNA TYNT++ GFC  G++    E+   M E
Sbjct: 120 NIMLRHLCATGK---PVRALELLRQMP-RPNAVTYNTVIAGFCARGRVQAALEVMREMRE 175

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHGLFEIRQA 348
             G   D ++Y  LI+G+CK   +E+A+ +++E+  KG + P+ V YN L  G  ++ + 
Sbjct: 176 RGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKL 235

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           + AL+   +M    +A    TY   +  L +  +    YA
Sbjct: 236 DVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 32/401 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+   +     D  + L + + S G   +   ++ L+   C  G+V      
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + + C AP+V+T+T+L+  LC   +  EA  +  ++ A GC P+ +T++TLI+GLC+
Sbjct: 67  FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 129 TGHTIVALNLFKEMTN---GNGE-----------------------IGVV----FKPNTV 158
            G    A  + +++     GN +                       +GVV    F P  +
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            ++++I+G CK   +D A +L   M  +   PNV T+T LI G C AN   EA+ LL +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V  G  PNVV+ + ++N LCK G++D+A  L  LM + +  PN  T+N L+DG C   +I
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT-VVTYNT 337
              ++L+  M   GC  D  +YN LI+G CK+ +V+EA  L+  +P  G+     VTY+T
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           LFHG   + +   A ++F  +     + D  TY + I   C
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 406



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 180/342 (52%), Gaps = 8/342 (2%)

Query: 43  FPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
            P+ +TY ILI  F   G + +   +   +  + F  N V  T+L+KGLC   R+VEA  
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
            F  + A  C P+V+TY  L++ LC+ G    A  + +EM      I     P+TVT+S 
Sbjct: 66  HFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREM------IARGCAPDTVTFST 118

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA-NDWNEAKGLLIEMVDQ 221
           +IDGLCK G  ++A  +   +    +  +   + ++I   C+  N    A  +L  ++ +
Sbjct: 119 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P V+  N+++N  CK   +D+A +LL++M++    PN FT+  L+ G C   ++   
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           ++L   M + GC  +  +Y+ +ING CK  +V++A  L+  +  +   P VVT+N L  G
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L + ++ E A +L+  M+    A D  TY + IDGLC   QV
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 340



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 182/406 (44%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P V ++  L+  L K   +D    + + + + G  PD  T+S LI+  CK G        
Sbjct: 76  PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRV 135

Query: 62  -----------------------------VSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
                                        V L   + G ++   F P V+ F  +I G C
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +  A  L   +   GC PNV T+  LI GLC+      A  L ++M  G       
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG------ 249

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN VTYS +I+GLCK+G VD A ELF  M+  N  PNVVT+  LI G C A    EA+
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP-NAFTYNTLMDG 271
            L   M + G  P++++ N +++ LCK+ ++D A +L   + +  V   NA TY+TL  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +   G++     +F  +   G   D  +Y  LI  YCK     E + L  E+  KG  P 
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           V T + +  GLFE    ERA++LF  M       D   Y   ++G+
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 176/408 (43%), Gaps = 43/408 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F IL+  L K         L +++ + G  P++ TYS +IN  CK GQV   + +
Sbjct: 217 PNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL 276

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PNVVT   LI GLC   RI EA  L+ +++  GC P++ITYN+LI+GLC+
Sbjct: 277 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A  LF+ +         V   N VTYS +  G    G +  A  +F  +  +  
Sbjct: 337 SFQVDEAFQLFQTIPESG-----VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 391

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TYTSLI  +C  +   E   L+ EM  +G  P V + + ++  L +    + A +
Sbjct: 392 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 451

Query: 249 LLDLMVQCDVRPNAFTYNTLMDG------------------------------------- 271
           L D M       +A  YN +++G                                     
Sbjct: 452 LFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVE 511

Query: 272 -FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  G+ +  K+L   M   G      SYN L++G  + +  +EA  ++  +   G  P
Sbjct: 512 SLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAP 571

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + T N +   L    + + A +L   M       D  T  T I G C
Sbjct: 572 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 619



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 10/355 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V + NIL+  L K K  +    L+ R+   G  PD+ TY+ LI+  CK  QV   F 
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345

Query: 68  IFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +F  I  S   A N VT+++L  G  A  R+ +A  +F+ L   G  P++ TY +LI   
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+T   +  + L +EM +        F P   T S ++ GL +    ++A +LF  M   
Sbjct: 406 CKTSRAVEVVELVEEMASKG------FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ---GVQPNVVSSNVIMNELCKNGKM 243
               + + Y  ++ G   A+  N+A  +L +++D+      P+  + + ++  LC+ G+ 
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRT 519

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A +LL  M +        +YN L+ G     + +   ++F +M S G   +  + N++
Sbjct: 520 DDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 579

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           I+  C   +V++A  L   +   G  P + T NTL  G  +  +A+ A KL  EM
Sbjct: 580 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 634



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 149/279 (53%), Gaps = 12/279 (4%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C PN  TY  LI G    G   +A+ L +EM + NG     F+ N V ++ ++ GLC  G
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS-NG-----FEGNAVVHTTLMKGLCDAG 58

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V +A E F  M  ++  P+V+TYT+L+H  C A  ++EA+G+L EM+ +G  P+ V+ +
Sbjct: 59  RVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK---ELFVSM 288
            +++ LCK G  + A R+L+ ++Q  +  +   + T++   C   K N V+   ++   +
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC--NKYNSVELASKVLGVV 175

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            + G       +N++ING+CK K+++ A  L   +  KG  P V T+  L  GL +  + 
Sbjct: 176 IAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRV 235

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             A +L  +M     + +  TY T I+GLC + QV   Y
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAY 274


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 193/377 (51%), Gaps = 10/377 (2%)

Query: 5   HPS-PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP+  P   S+ +L+  L  ++  D  + L + + S G+  D+ TY  LI   C   +V 
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               + G +  S   PNVV ++SL++G C   R  +   +F ++   G EP+V+ Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           + LC+ G    A  +   M           +PN VTY+++I+ +CKEG V +A  +  +M
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRG------LEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNG 241
             + + P+VVTY +LI G     + +EA  LL EMV     V+PNVV+ N ++  LC  G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           +M  A ++  +M +     N  TYN L+ G     K+ +  EL   M S+G + D F+Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ILI G+CK  +V+ A  L + +  +GI+P +  Y  L   + E    ERA  LF EM  N
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-N 460

Query: 362 DVAADTCTYRTFIDGLC 378
           +   D   Y T I G C
Sbjct: 461 NFPLDVVAYSTMIHGAC 477



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 175/356 (49%), Gaps = 19/356 (5%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-------CFAPNVVTFTSLIK 89
           L+++    D  +Y+ ++   C+ G         G +LR+          PN V++T L++
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRA----GALLRAMSLEPHPACRPNAVSYTVLMR 123

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
            LCA+    +A  L   +++ G   +V+TY TLI GLC       A+ L  EM     E 
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ES 179

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+  +PN V YS ++ G CK G  +   ++F++M  + + P+VV YT LI   C      
Sbjct: 180 GI--EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A G++  MV +G++PNVV+ NV++N +CK G +  A  +L  M +  V P+  TYNTL+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 270 DGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
            G     +++    L   M       K +  ++N +I G C    + +A  +   +   G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +VTYN L  GL  + +  +A++L  EM    +  D+ TY   I G C   QV
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 13/311 (4%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAF---GCEPNVITYNTLINGLCRTGHTIVAL 136
           + V++ +++  LC       A AL   +       C PN ++Y  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L + M +         + + VTY  +I GLC    VDKA EL  +M    + PNVV Y+
Sbjct: 136 GLLRSMRSAG------VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SL+ G+C +  W +   + +EM ++G++P+VV    +++ LCK GK   A  ++D+MV+ 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PN  TYN L++  C  G +     +   M   G   D  +YN LI G     E++EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 317 LSLYNELPFKG---IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + L  E+  +G   +KP VVT+N++  GL +I +  +A ++   M+      +  TY   
Sbjct: 310 MWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 374 IDGLCVRPQVR 384
           I GL    +VR
Sbjct: 369 IGGLLRVHKVR 379



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA +L   L +     + ++YNT++  LCR GH   A  L + M+    E     +PN V
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAV 116

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y++++  LC +   D+A  L   M+   +  +VVTY +LI G C A + ++A  L+ EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            + G++PNVV  + ++   CK+G+ ++  ++   M +  + P+   Y  L+D  C  GK 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +   +   M   G + +  +YN+LIN  CK   V+EA+ +  ++  KG+ P VVTYNTL
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 339 FHGLFEIRQAERALKLFVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
             GL ++ + + A+ L  EM    N V  +  T+ + I GLC   ++R  +  R
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 9/322 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+ C+ K       + + K+++  G+ PD+ TY+ LI     + ++     +
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 69  FGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              ++R  +   PNVVTF S+I+GLC   R+ +A  +   ++  GC  N++TYN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R      A+ L  EMT+      +  +P++ TYSI+I G CK   VD+A++L   M+  
Sbjct: 373 LRVHKVRKAMELMDEMTS------LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P +  Y  L+   C       A+ L  EM D     +VV+ + +++  CK G +  A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             LL  +V   + P+A TY+ +++ F  +G +     +   M + G   D   ++ LI G
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG 545

Query: 307 YCKNKEVEEALSLYNELPFKGI 328
           Y    E+ + L L  E+  K I
Sbjct: 546 YSTKGEINKVLELIREMITKNI 567



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 19/319 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L           +   +   G   +L TY++LI    ++ +V     +
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  T++ LIKG C   ++  A  L + ++  G EP +  Y  L+  +C 
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A NLF EM N        F  + V YS +I G CK G +  AKEL   +  E L
Sbjct: 445 QGMMERARNLFNEMDNN-------FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY+ +I+ F  + D   A G+L +M   G  P+V   + ++      G+++    
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+  ++  ++   +TL      +   N  K L  S+        DFS  I      
Sbjct: 558 LIREMITKNIALDSKIISTLSTSLVAS---NEGKALLQSLP-------DFSAEISKGNIN 607

Query: 309 KNKEVEEALSLYNELPFKG 327
             +E+ +   L+N + FK 
Sbjct: 608 SPQELMKV--LHNAISFKA 624



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V +++ ++    K     T   L K +   GL PD  TYSI+IN F K G +     
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           +  ++  S F P+V  F SLI+G   +  I +   L  ++
Sbjct: 523 VLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 201/400 (50%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ ++  L K +  D   +  +++ + G+ PD +TY+ LI  +   GQ      
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VV   +L+  LC   +I EA  +F  +   G  P+V +Y  ++NG  
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV------------------------------FKPNT 157
             G  +   +LF  M  G+G   V+                               KP+ 
Sbjct: 373 TKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G++ ++V    I+N LCK G++ +A  + DL V   + P+A  YN LMDG+CL GK
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  KGIKP+ + YN 
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLFE  +   A   F EM  + +A + CTY   + GL
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  YTY+IL++C  +  +  L    FG++LR+    + +  
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + L+KG C   R  EA   L  +    GC P+V +YN L+  LC  G +  A +L + M 
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  P+ V Y+ +IDG  KEG V+KA +LF +M    + P++VTY+S++H  C
Sbjct: 212 EG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALC 267

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++GV P+  + N ++      G+   A R+   M +  + P+  
Sbjct: 268 KARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
             NTLM   C  GKI   +++F +M   G   D FSY I++NGY     + +   L++ +
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P + T+N L          ++A+ +F EM+ + V     TY T I  LC
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+G L K         +F  +   G  PD+++Y+I++N +   G +     +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    AP + TF  LIK       + +A  +F +++  G +P+V+TY T+I  LCR
Sbjct: 384 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+  F +M +     GVV  P+   Y  +I G C  G + KAKEL  ++    +
Sbjct: 444 IGKMDDAMEKFNQMIDQ----GVV--PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++V + S+I+  C      +A+ +    V+ G+ P+ V  N++M+  C  GKM+ A R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV   + PN   Y TL++G+C  G+I+    LF  M   G K     YNI+I+G  
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +      A   ++E+   GI     TY+ +  GLF+ R  + A+ LF E++  +V  D  
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 369 TYRTFIDGL 377
           T  T I G+
Sbjct: 678 TLNTMIAGM 686



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 208/452 (46%), Gaps = 85/452 (18%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S+NILL  L    K+   D +L +     ++   PD+  Y+ +I+ 
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-CSPDVVAYNTVIDG 230

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT++S++  LC    + +A A   ++   G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ V  + ++  LCK G + +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPDVVALNTLMGSLCKYGKIKE 344

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +YT +++G+                                 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK----------- 294
           + + Y+ L+ GFC  G + + KEL   + + G               CK           
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 295 ---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                     D   YN+L++GYC   ++E+AL +++ +   GI+P VV Y TL +G  +I
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +  L LF EM    +   T  Y   IDGL
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+ I+L   A       +  LF  +   G+ P + T+++LI  +   G + 
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLD 413

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   Y+ LI
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +  II+ LCK G V  A+ +F   
Sbjct: 474 QGFCTHGSLLKAKELISEIMNNGMRLDIVF------FGSIINNLCKLGRVMDAQNIFDLT 527

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+ V Y  L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   YN ++DG    G+    K  F  M   G   +  +Y+I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 364 AADTCTYRTFIDGL 377
                TY   I  L
Sbjct: 708 VPCAVTYSIMITNL 721



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 173/359 (48%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN+L+   A     D  + +F  +   G+ P + TY  +I   C++G++      
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+   +  LI+G C    +++A  L +++   G   +++ + ++IN LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F    N      V   P+ V Y++++DG C  G ++KA  +F  M    +
Sbjct: 514 LGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y +L++G+C     +E   L  EM+ +G++P+ +  N+I++ L + G+   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  N  TY+ ++ G       +    LF  + +M  K D  + N +I G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + + VEEA  L+  +   G+ P  VTY+ +   L +    E A  +F  MQ      D+
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 175/390 (44%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y  LI  FC  G +  
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F S+I  LC   R+++A  +F      G  P+ + YN L++
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIGRIDEGLSLFREML 598

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+ + Y  +I G   A     AK    EM + G+  N  + ++++  L KN   D
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ +  T NT++ G   T ++   K+LF S+   G      +Y+I+I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R Q+RF  A+
Sbjct: 779 LEHLTAMLLVDLFSSKGTC-REQIRFLPAK 807



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 145

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            + +  S ++ G C+    D+A ++ L    E    P+V +Y  L+   C+     +A  
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+ N +++   K G ++ A  L   MVQ  + P+  TY++++  
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M + G   D+++YN LI GY    + +EA+ ++ E+  + I P 
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VV  NTL   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+LL  L +    D   +L   + S  + PD +TYSIL +   + G       +
Sbjct: 263 PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSL 322

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG  L+        T + L+ GLC + ++ +A  +   L   G  P    YNTLING C+
Sbjct: 323 FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQ 382

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F++M + +       +P+ +TY+ +I+GLCK   + +A++L ++M+   +
Sbjct: 383 VRDLQGAFSIFEQMKSRH------IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGV 436

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V T+ +LI  +  A    +   +L +M D+G++ NV+S   ++   CKNGK+  A  
Sbjct: 437 DPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVA 496

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD M+  DV PNA  YN+++D +  +G   +   L   M+S G     F+YN+L+ G C
Sbjct: 497 ILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLC 556

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +++EA  L   L  +G++P VV+YNT+          +RAL+L  EM   D+     
Sbjct: 557 KNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLR 616

Query: 369 TYRTFIDGL 377
           TY   +  L
Sbjct: 617 TYHPLLSAL 625



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 9/375 (2%)

Query: 7   SP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP P +SS N+LL  L     +  V + F  L + G  PD + ++  +      G +   
Sbjct: 118 SPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEA 177

Query: 66  FVIFGRILRSCFAP--NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             +  R+ RS  AP  +  ++  +I GL    +  +A  +F ++   G  PN ITYNT+I
Sbjct: 178 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G       L  +M   +G      KPN VTY++++ GLC+ G +D+ + L  +M
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQ-DGR-----KPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              ++ P+  TY+ L  G     D      L  E + +GV     + ++++N LCK+GK+
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A ++L+++V   + P    YNTL++G+C    +     +F  M+S   + D  +YN L
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING CK + + EA  L  E+   G+ P+V T+NTL        Q E+   +  +MQ   +
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471

Query: 364 AADTCTYRTFIDGLC 378
            ++  ++ + +   C
Sbjct: 472 KSNVISFGSVVKAFC 486


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 32/401 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+   +     D  + L + + S G   +   ++ L+   C  G+V      
Sbjct: 55  PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + + C AP+V+T+T+L+  LC   +  EA  +  ++ A GC P+ +T++TLI+GLC+
Sbjct: 115 FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173

Query: 129 TGHTIVALNLFKEMTN---GNGE-----------------------IGVV----FKPNTV 158
            G    A  + +++     GN +                       +GVV    F P  +
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            ++++I+G CK   +D A +L   M  +   PNV T+T LI G C AN   EA+ LL +M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V  G  PNVV+ + ++N LCK G++D+A  L  LM + +  PN  T+N L+DG C   +I
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT-VVTYNT 337
              ++L+  M   GC  D  +YN LI+G CK+ +V+EA  L+  +P  G+     VTY+T
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 413

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           LFHG   + +   A ++F  +     + D  TY + I   C
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 454



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 191/374 (51%), Gaps = 8/374 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S N  L  L +       L+LF+   +    P+ +TY ILI  F   G + +   +  
Sbjct: 22  VFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLE 81

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S F  N V  T+L+KGLC   R+VEA   F  + A  C P+V+TY  L++ LC+ G
Sbjct: 82  EMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAG 140

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  + +EM      +     P+TVT+S +IDGLCK G  ++A  +   +    +  
Sbjct: 141 KFDEAQGMLREM------VAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGN 194

Query: 191 NVVTYTSLIHGFCHA-NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           +   + ++I   C+  N    A  +L  ++ +G  P V+  N+++N  CK   +D+A +L
Sbjct: 195 SDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKL 254

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L++M++    PN FT+  L+ G C   ++   ++L   M   GC  +  +Y+ +ING CK
Sbjct: 255 LEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCK 314

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             +V++A  L+  +  +   P VVT+N L  GL + ++ E A +L+  M+    A D  T
Sbjct: 315 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 374

Query: 370 YRTFIDGLCVRPQV 383
           Y + IDGLC   QV
Sbjct: 375 YNSLIDGLCKSFQV 388



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 182/406 (44%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P V ++  L+  L K   +D    + + + + G  PD  T+S LI+  CK G        
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 62  -----------------------------VSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
                                        V L   + G ++   F P V+ F  +I G C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +  A  L   +   GC PNV T+  LI GLC+      A  L ++M  G       
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG------ 297

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN VTYS +I+GLCK+G VD A ELF  M+  N  PNVVT+  LI G C A    EA+
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP-NAFTYNTLMDG 271
            L   M + G  P++++ N +++ LCK+ ++D A +L   + +  V   NA TY+TL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +   G++     +F  +   G   D  +Y  LI  YCK     E + L  E+  KG  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           V T + +  GLFE    ERA++LF  M       D   Y   ++G+
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 523



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 175/408 (42%), Gaps = 43/408 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F IL+  L K         L +++   G  P++ TYS +IN  CK GQV   + +
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PNVVT   LI GLC   RI EA  L+ +++  GC P++ITYN+LI+GLC+
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A  LF+ +         V   N VTYS +  G    G +  A  +F  +  +  
Sbjct: 385 SFQVDEAFQLFQTIPESG-----VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 439

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ TYTSLI  +C  +   E   L+ EM  +G  P V + + ++  L +    + A +
Sbjct: 440 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 499

Query: 249 LLDLMVQCDVRPNAFTYNTLMDG------------------------------------- 271
           L D M       +A  YN +++G                                     
Sbjct: 500 LFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVE 559

Query: 272 -FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  GK +  K+L   M   G      SYN L++G  + +  +EA  ++  +   G  P
Sbjct: 560 SLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAP 619

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + T N +   L    + + A +L   M       D  T  T I G C
Sbjct: 620 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 166/324 (51%), Gaps = 12/324 (3%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++F    RS    NV +    +  LC  +R  EA ALF    A  C PN  TY  LI G 
Sbjct: 8   LLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGF 67

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
              G   +A+ L +EM +        F+ N V ++ ++ GLC  G V +A E F  M  +
Sbjct: 68  SSAGDLDIAIQLLEEMKSSG------FEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-K 120

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           +  P+V+TYT+L+H  C A  ++EA+G+L EMV QG  P+ V+ + +++ LCK G  + A
Sbjct: 121 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK---ELFVSMESMGCKHDDFSYNIL 303
            R+L+ ++Q  +  +   + T++   C   K N V+   ++   + + G       +N++
Sbjct: 181 FRVLEDVIQRGMGNSDAAFETIIQRLC--NKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING+CK K+++ A  L   +  KG  P V T+  L  GL +  +   A +L  +M     
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298

Query: 364 AADTCTYRTFIDGLCVRPQVRFTY 387
           + +  TY T I+GLC + QV   Y
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAY 322



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 10/355 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V + NIL+  L K K  +    L+ R+   G  PD+ TY+ LI+  CK  QV   F 
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 393

Query: 68  IFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +F  I  S   A N VT+++L  G  A  R+ +A  +F+ L   G  P++ TY +LI   
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 453

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+T   +  + L +EM +        F P   T S ++ GL +    ++A +LF  M   
Sbjct: 454 CKTSRAVEVVELVEEMASKG------FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ---GVQPNVVSSNVIMNELCKNGKM 243
               + + Y  ++ G   A+  ++A  +L +++D+      P+  + + ++  LC+ GK 
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKT 567

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A +LL  M +        +YN L+ G     + +   ++F +M S G   +  + N++
Sbjct: 568 DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 627

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           I+  C   +V++A  L   +   G  P + T NTL  G  +  +A+ A KL  EM
Sbjct: 628 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 682


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 200/380 (52%), Gaps = 8/380 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILIN--CFCKMG 60
           H H S   ++ FN  L CL K   + T ++LF + N    F      ++ I   CF  +G
Sbjct: 31  HSHSS---LAHFNKHLTCLMKTNQHSTAIALFNQ-NEYNNFITPCIITLTIIITCFFHLG 86

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            VS  F IFG+IL+  +  + V   +++KGLC    +++A     ++   G   N ++Y 
Sbjct: 87  HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYG 146

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEI--GVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
            LINGLC  G    A+NL + +     +   G   K N V YSI+ID LC+ GFVD+  E
Sbjct: 147 ILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFE 206

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
            + +M    + PN  TY SLI G C    + E  GL+ EM+ +G+  +V    V+++ LC
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLC 266

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KNG +  A  + D MV     PN  T   LM G+CL G ++  +ELF ++   G K D +
Sbjct: 267 KNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVW 326

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN+ I+GYCK   V +A+ +++E+  +G+ P +VTYN+L   L +  +   A ++   M
Sbjct: 327 TYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTM 386

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             + +  D  T    +DGLC
Sbjct: 387 HRSGLTPDIVTCCILLDGLC 406



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++I++ CL +N   D     +  +   G+ P+ +TY  LI   C +G+   GF +  
Sbjct: 185 VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD 244

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R     +V  FT LI GLC    +VEA  +F ++   G EPN++T   L+ G C  G
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKG 304

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +  +A  LF  +    GE G  FK +  TY++ I G CK G V  A  +F +M  E + P
Sbjct: 305 NVDMARELFDAI----GEWG--FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+VTY SLI   C A + + A  ++  M   G+ P++V+  ++++ LCK+ ++D A  L 
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + +V+  + P+ ++Y  L+ G C + ++     L   M          +Y+ LI+G C++
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +  A  L NE+  KG  P  +TY+ L   L++ +  + A+ LF +M    +  D   Y
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538

Query: 371 RTFIDGLCVRPQV 383
              IDG C   ++
Sbjct: 539 TIMIDGYCKSERI 551



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 194/379 (51%), Gaps = 14/379 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSI------GLF--PDLYTYSILINCFCKMGQVSL 64
           S+ IL+  L +N   +  ++L + +         G F   ++  YSI+I+C C+ G V  
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           GF  +  ++ +   PN  T+ SLI+GLC   + +E   L  ++   G + +V  +  LI+
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G  + A  +F EM N        ++PN VT + ++ G C +G VD A+ELF  + 
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRG------YEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                 +V TY   IHG+C      +A  +  EM  +GV PN+V+ N +++ LCK G++ 
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  ++  M +  + P+  T   L+DG C + ++++   LF  +   G   D +SY ILI
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G C ++ + EA++L  ++  K + P +VTY+ L  GL    +   A +L  EM      
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            DT TY   +D L  +  +
Sbjct: 498 PDTITYSILLDALWKKQHL 516



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  F +L+  L KN        +F  + + G  P++ T + L+  +C  G V +   +F 
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I    F  +V T+   I G C   R+ +A  +F ++   G  PN++TYN+LI+ LC+ G
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  + K M            P+ VT  I++DGLCK   +D+A  LF Q+    L P
Sbjct: 375 EVSGAWEIVKTMHRSG------LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP 428

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V +YT LIHG C +    EA  LL +M  + + P++V+ + +++ LC++G++ NA RLL
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M      P+  TY+ L+D       ++    LF  M   G + D   Y I+I+GYCK+
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           + ++EA++L+ E+  K + P +VTY  LF+ +F+
Sbjct: 549 ERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 6/327 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +   L+G      + D    LF  +   G   D++TY++ I+ +CK+G+V     +
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    PN+VT+ SLI  LC    +  A  +   +   G  P+++T   L++GLC+
Sbjct: 348 FDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +     A+ LF ++            P+  +Y+I+I G C    + +A  L   M  +NL
Sbjct: 408 SKRLDQAILLFNQLVESG------LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY+ LI G C +   + A  LL EM  +G  P+ ++ +++++ L K   +D A  
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M++  + P+   Y  ++DG+C + +I+    LF  M       D  +Y IL N   
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTY 335
           K+          N +      P V+ Y
Sbjct: 582 KSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH S   P + +  ILL  L K+K  D  + LF +L   GL PD+++Y+ILI+  C 
Sbjct: 383 VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             ++     +   +      P++VT++ LI GLC   RI  A  L  ++   G  P+ IT
Sbjct: 443 SRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTIT 502

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y+ L++ L +  H   A+ LF +M     E      P+ + Y+I+IDG CK   +D+A  
Sbjct: 503 YSILLDALWKKQHLDEAVFLFNQMIKRGLE------PDVMCYTIMIDGYCKSERIDEAIN 556

Query: 179 LFLQMKYENLNPNVVTYTSL 198
           LF +M  +NL P++VTYT L
Sbjct: 557 LFREMHMKNLVPDIVTYTIL 576



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 124/265 (46%), Gaps = 18/265 (6%)

Query: 130 GHTIVALNLF-KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           GH   + ++F K +  G G        +TV  + ++ GLC  G V KA E   ++     
Sbjct: 86  GHVSFSFSIFGKILKRGYG-------LDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGF 138

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG---------VQPNVVSSNVIMNELCK 239
           + N V+Y  LI+G C     NEA  LL  M+++          V+ NVV  +++++ LC+
Sbjct: 139 SLNEVSYGILINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCR 197

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           NG +D      + M+   V PN FTY +L+ G C  GK      L   M   G     + 
Sbjct: 198 NGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYV 257

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           + +LI+G CKN  + EA  +++E+  +G +P +VT   L  G       + A +LF  + 
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
                 D  TY  FI G C   +VR
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVR 342



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 63/128 (49%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+    P + +++ L+  L ++        L   ++  G  PD  TYSIL++   K   +
Sbjct: 457 HLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHL 516

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F ++++    P+V+ +T +I G C   RI EA  LF ++      P+++TY  L
Sbjct: 517 DEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTIL 576

Query: 123 INGLCRTG 130
            N + ++G
Sbjct: 577 FNAVFKSG 584


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 10/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + K    D  + +F+ +      PD++TY  L++  CK  ++    ++
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + +  CF P+ VTF  LI GLC +  +V    L   +   GC PN +TYNT+INGLC
Sbjct: 230 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++L   M      +     PN VTY  +I+GL K+G       L   ++   
Sbjct: 289 LKGKLDKAVSLLDRM------VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + N   Y++LI G        EA GL  +MV++G QPN+V  + +++ LC+ GK+D A 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  MV     PNAFTY++L+ GF  TG   +   ++  M    C  ++  Y++LI+G 
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAA 365
           C++ ++ EA+ ++  +  +G++P VV Y+++ HGL      E  LKLF EM  Q +D   
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 366 DTCTYRTFIDGLC 378
           D  TY   +  LC
Sbjct: 523 DVVTYNILLRALC 535



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 181/372 (48%), Gaps = 10/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFV 67
           P V ++  L+  L K    D  + L   +   G FP   T+++LIN  CK G  V +  +
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 264

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +    L+ C  PN VT+ ++I GLC + ++ +A +L  ++ A  C PN +TY TLINGL 
Sbjct: 265 VDNMFLKGC-VPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G ++  ++L   +             N   YS +I GL KE   ++A  L+ +M  + 
Sbjct: 324 KQGRSVDGVHLLSSLEERG------HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+V Y++LI G C     +EAK +L EMV++G  PN  + + ++    K G    A 
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+   M + +  PN   Y+ L+ G C  GK+     ++  M   G + D  +Y+ +I+G 
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497

Query: 308 CKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           C    VE  L L+NE+  +    +P VVTYN L   L +      A+ L   M       
Sbjct: 498 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 557

Query: 366 DTCTYRTFIDGL 377
           D  T   F++ L
Sbjct: 558 DLITCNIFLNAL 569



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 8/350 (2%)

Query: 32  SLFKRLNSIGLFP--DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            +FK  + +G +   D   YS++ N +   G     F +F R+ R         F  + +
Sbjct: 49  QIFKSASQMGSYKSGDSTFYSLIEN-YANSGDFGTLFQVFDRMKRERRVFIEKNFILVFR 107

Query: 90  GLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
                    +A  LF ++   F C   V ++N+++N + + G    AL  ++    G   
Sbjct: 108 AYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN 167

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
           I     PN ++++++I  +CK G VD+A E+F +M  +   P+V TY +L+ G C  +  
Sbjct: 168 IS----PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 223

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           +EA  LL EM  +G  P+ V+ NV++N LCK G M   ++L+D M      PN  TYNT+
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++G CL GK+++   L   M +  C  +D +Y  LING  K     + + L + L  +G 
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 Y+TL  GLF+  ++E A+ L+ +M       +   Y   IDGLC
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 393



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 162/307 (52%), Gaps = 6/307 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           +PNV++F  +IK +C    +  A  +F ++    CEP+V TY TL++GLC+      A+ 
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L  EM     +I   F P++VT++++I+GLCK+G + +  +L   M  +   PN VTY +
Sbjct: 229 LLDEM-----QIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I+G C     ++A  LL  MV     PN V+   ++N L K G+  +   LL  + +  
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
              N + Y+TL+ G     K      L+  M   GC+ +   Y+ LI+G C+  +++EA 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  E+  KG  P   TY++L  G F+   +++A++++ EM  N+   +   Y   I GL
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 378 CVRPQVR 384
           C   ++R
Sbjct: 463 CEDGKLR 469



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 29/292 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+  L K +  +  + L+K++   G  P++  YS LI+  C+ G++     I   +
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN  T++SLIKG        +A  ++ ++    C PN I Y+ LI+GLC  G  
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM--KYENLNP 190
             A+ ++  M      +G   +P+ V YS +I GLC  G V+   +LF +M  +  +  P
Sbjct: 469 REAMMMWTHM------LGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--------------- 235
           +VVTY  L+   C  N  + A  LL  M+D+G  P++++ N+ +N               
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF 582

Query: 236 ------ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
                  L K  ++  A++++++M+Q  + PNA T+  ++   C   K+  +
Sbjct: 583 LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAI 634



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 3/234 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K    T+  +I+     G      ++F +MK E        +  +   +  A+   +A 
Sbjct: 60  YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAI 119

Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV--QCDVRPNAFTYNTLM 269
            L   MVD+   +  V S N ++N + + G    A    +  V  + ++ PN  ++N ++
Sbjct: 120 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVI 179

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
              C  G ++R  E+F  M    C+ D F+Y  L++G CK   ++EA+ L +E+  +G  
Sbjct: 180 KAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF 239

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           P+ VT+N L +GL +     R  KL   M       +  TY T I+GLC++ ++
Sbjct: 240 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 188/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL  L+K+ +   V   F  +   G+ P ++TY+++I+  CK G +     +
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++     +P+VVT+ SLI G      + E A+LF ++K  GC P++ITYN LIN  C+
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   F EM N NG      KPN VTYS +ID  CKEG +  A +L   M+   L
Sbjct: 313 FEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI   C A +  EA  LL +M+  GV+ N+V+   +++ LCK G+M  A  
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M++  + PN   Y  L+ G+    ++    ++   M     K D   Y  +I G+C
Sbjct: 427 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++EE   +  E+  +GI    V   T+    F+  ++  AL  F EMQ   V A   
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546

Query: 369 TYRTFIDGLC 378
           TY   IDGLC
Sbjct: 547 TYCVLIDGLC 556



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 189/376 (50%), Gaps = 7/376 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR M  SP  V ++N L+    K    + V SLF  +  +G  PD+ TY+ LINC+CK  
Sbjct: 256 MREMGLSPD-VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 314

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   F  F  +  +   PNVVT+++LI   C E  +  A  L   ++  G  PN  TY 
Sbjct: 315 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYT 374

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+  C+ G+   A  L  +M       GV  K N VTY+ ++DGLCK G + +A+E+F
Sbjct: 375 SLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVF 428

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + ++PN   YT+L+HG+  A    +A  +L +M +  ++P+++    I+   C  
Sbjct: 429 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 488

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            K++    +L+ M    +  N     T++D +   GK +     F  M+ +G +    +Y
Sbjct: 489 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            +LI+G C+   VE A+  +  +   G++P V  Y +L  GL      E A KLF EMQ 
Sbjct: 549 CVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608

Query: 361 NDVAADTCTYRTFIDG 376
             +  D   +   IDG
Sbjct: 609 RGMTPDITAFTALIDG 624



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K       + L   +   GL P+ +TY+ LI+  CK G ++  + +
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKL 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L++    N+VT+T+L+ GLC   R++EA  +F  +   G  PN   Y  L++G  +
Sbjct: 393 LNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 452

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ + K+MT  N       KP+ + Y  II G C +  +++ K +  +MK   +
Sbjct: 453 AERMEDAMKILKQMTECN------IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 506

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N V  T++I  +  A   ++A     EM D GV+  +V+  V+++ LC+ G ++ A  
Sbjct: 507 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVD 566

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M+   ++PN   Y +L+DG C    I   K+LF  M+  G   D  ++  LI+G  
Sbjct: 567 YFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 626

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K+  ++EAL L + +    I+  +  Y +L  G  +  +  +A K F EM
Sbjct: 627 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 676



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA   F++++ F   P   + N L++ L ++G+  +    F +M      IG    P+  
Sbjct: 178 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVF 231

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+++ID LCKEG ++ ++ LF+QM+   L+P+VVTY SLI G+       E   L  EM
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            D G  P++++ N ++N  CK  KM  A      M    ++PN  TY+TL+D FC  G +
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               +L   M   G   ++F+Y  LI+  CK   + EA  L N++   G+K  +VTY  L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             GL +  +   A ++F  M  + ++ +   Y   + G
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            + +L + F ++G +      F R+      P   +   L+  L            F  +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              G  P+V TYN +I+ LC+ G    +  LF +M     E+G+   P+ VTY+ +IDG 
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR----EMGL--SPDVVTYNSLIDGY 275

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K G +++   LF +MK     P+++TY  LI+ +C       A     EM + G++PNV
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ + +++  CK G M  A +LL  M +  + PN FTY +L+D  C  G +    +L   
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G K +  +Y  L++G CK   + EA  ++  +   GI P    Y  L HG  +  +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            E A+K+  +M   ++  D   Y + I G C + ++  T
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEET 494



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 158/313 (50%), Gaps = 6/313 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  LL  L K         +F+ +   G+ P+   Y+ L++ + K  ++     I  
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 464

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+++ + S+I G C++ ++ E   +  ++K+ G   N +   T+I+   + G
Sbjct: 465 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG 524

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            +  ALN F+EM +    +GV  +   VTY ++IDGLC+ G V+ A + F +M    L P
Sbjct: 525 KSSDALNFFQEMQD----VGV--EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV  YTSLI G C  N    AK L  EM  +G+ P++ +   +++   K+G +  A  L+
Sbjct: 579 NVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 638

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  +  +   Y +L+ GF   G++++ ++ F  M   G   ++     L+  Y K 
Sbjct: 639 SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKR 698

Query: 311 KEVEEALSLYNEL 323
            +++EA+ L NE+
Sbjct: 699 GQLDEAIELKNEM 711



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 6/284 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+    K +  +  + + K++    + PDL  Y  +I   C   ++    +I
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     + N V  T++I       +  +A   F +++  G E  ++TY  LI+GLC 
Sbjct: 498 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE 557

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A++ F  M      + +  +PN   Y+ +IDGLC    ++ AK+LF +M+   +
Sbjct: 558 AGIVELAVDYFCRM------LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  +T+LI G     +  EA  L+  M +  ++ ++     +++   + G++  A +
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             + M++  + P       L+  +   G+++   EL   ME M 
Sbjct: 672 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 205/368 (55%), Gaps = 12/368 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN L+  L K +  +  ++  K+++    FP L+TY+ L++ F K+G++    +     
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   F P+ VT+TS+I GLC   R+ E    F +++  G EP+ +TY  LI+G  +    
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  ++++M      +      +TVTY+II+DGLCK G V +A   FL M+       V
Sbjct: 376 PKAHRVYRQMLQSGTVV------STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY++L+ GFC   + + A  L   M+D+G +PN+VS N+I+  LC+ GK+  A    + 
Sbjct: 430 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEK 489

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVK---ELFVSMESMGCKHDDFSYNILINGYCK 309
           ++Q  + P+ +T+N+ + G C   +++ V    ELF SM S G   +  SY+IL++G C+
Sbjct: 490 LLQRRLCPDVYTFNSFLHGLC--QRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICR 547

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +E  L +++E+  +G+ P VV +NTL   L    + + AL++F E++    A D  +
Sbjct: 548 AGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWS 606

Query: 370 YRTFIDGL 377
           Y + +D L
Sbjct: 607 YWSLLDAL 614



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 49/411 (11%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL  L K    D  + L   L+ +   PD+  ++++IN  C+  ++   F +  R +R+ 
Sbjct: 15  LLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ VT+   I GLC   R+ +A  L  K+    C P  +TY  L++GL + G    A+
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 137 NLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            + ++M   GN        P   TY+++IDGL K G V++A+ +F+ M      P+   Y
Sbjct: 132 AILEQMVEKGN-------SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVD----QGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           T+LI G       +EA   L +MV+    +GV+P+VV  N+++ +LC +G +++A    D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 252 ----------------LMVQCDVR------------------PNAFTYNTLMDGFCLTGK 277
                           +   C                     P  FTY +L+DGF   G+
Sbjct: 245 ELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGR 304

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++            G   D  +Y  +I+G CK   VEE    ++E+  +G +P  VTY  
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           L  G  + +   +A +++ +M  +     T TY   +DGLC   +V   YA
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 176/375 (46%), Gaps = 12/375 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLN----SIGLFPDLYTYSILINCFCKMGQVSL 64
           P    +  L+  LAK    D  L    ++     + G+ PD+  ++++I   C  G +  
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
               F   L         TF  L+  LC   R  EA A   K+    C P + TY +L++
Sbjct: 239 ALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G  + G    AL   KE           F P+ VTY+ IIDGLCK G V++  E F +M+
Sbjct: 298 GFLKLGRLDEALLQLKEAVERG------FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+ VTY +LI GF  A    +A  +  +M+  G   + V+ N+I++ LCK G++ 
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M +        TY+ LMDGFC  G ++   ELF  M   GC+ +  SYNI+I
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE-IRQAERALKLFVEMQGNDV 363
            G C+  ++ +A   + +L  + + P V T+N+  HGL + +      ++LF  M     
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGT 531

Query: 364 AADTCTYRTFIDGLC 378
           + +  +Y   +DG+C
Sbjct: 532 SPNLHSYSILMDGIC 546



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 38/407 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K    D  +++ +++   G  P L TY+++I+   K G+V     I
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC----EPNVITYNTLIN 124
           F  +L +   P+   +T+LI GL    ++ EA     ++   GC    EP+V+ +N +I 
Sbjct: 169 FVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIR 228

Query: 125 GLCRTGHTIVALNLFKEMTNG-------------------NGEIGVVFK---------PN 156
            LC +G+   AL  F E+ +                      E  + F          P 
Sbjct: 229 QLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPT 288

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKY---ENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             TY+ ++DG  K G +D+A    LQ+K        P+ VTYTS+I G C      E   
Sbjct: 289 LFTYTSLVDGFLKLGRLDEA---LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 345

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              EM ++G +P+ V+   +++   K   +  A R+   M+Q     +  TYN ++DG C
Sbjct: 346 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 405

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G++      F++ME  GC     +Y+ L++G+C    V  A+ L+  +  +G +P +V
Sbjct: 406 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 465

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +YN +  GL    +  +A   F ++    +  D  T+ +F+ GLC R
Sbjct: 466 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQR 512



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 16/301 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K K       +++++   G      TY+I+++  CK G+V+  +  
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  +  R C A  VVT+++L+ G C+E  +  A  LF ++   GCEPN+++YN +I GLC
Sbjct: 417 FLAMEERGCVA-TVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 475

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQMKYE 186
           R G    A   F+++            P+  T++  + GLC+    V    ELF  M  +
Sbjct: 476 RAGKLAKAYFYFEKLLQRR------LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ 529

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN+ +Y+ L+ G C A        +  EMV +GV P+VV  N ++  LC  G++D A
Sbjct: 530 GTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 589

Query: 247 SRLLDLMVQCDVR--PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--KHDDFSYNI 302
              L++  + + R  P+A++Y +L+D      ++   + L   M+  GC  +H D +   
Sbjct: 590 ---LEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRHYDLTVRF 646

Query: 303 L 303
           L
Sbjct: 647 L 647



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 7/228 (3%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +T   + +++GLCK G +D+A  L  +M     +P++V +T +I+G C     +EA  +L
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
              V  G +P+ V+ NV ++ LCK  ++D+A +LL  M +    P   TY  L+DG    
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++    +   M   G      +Y ++I+G  K   VEEA  ++ ++   G +P    Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGN----DVAADTCTYRTFIDGLCV 379
             L  GL +I + + AL    +M  N     V  D   +   I  LC 
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 192/351 (54%), Gaps = 7/351 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           +  ++L +++ + G  P + TY+ L+N  CKMG++     +  +I+ +   P+VVT+TSL
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I GL  E R  EA  LF ++   G   + + Y  LI  L +TG    A +++K MT+   
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH-- 120

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
             G V  P+ VT S +IDGL K G +  A  +F  M+   L PN V Y++LIHG C A  
Sbjct: 121 --GCV--PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            + A  +L +M      P+ ++ NV+++ LCK+G ++ A    D M++   +P+ +TYN 
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236

Query: 268 LMDGFCLTGKINRVKELFVSMESM-GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           L+ GFC  G  +          ++ GC  D  +Y  +++   KNK++EEA++L  ++   
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           G  PT+ TYN L +GL ++ + E A+ L  ++  N    D  TY + IDGL
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 194/377 (51%), Gaps = 9/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+  L K+   +   + F  +   G  PD+YTY+ILI+ FCK G        
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253

Query: 69  FGR--ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             +   +  C   ++ T+T+++  L    +I EA AL  K+ A GC P + TYN L+NGL
Sbjct: 254 LAQETTINGC-TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGL 312

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A++L +++ + NG       P+ VTY+ +IDGL KE    +A +LF +M   
Sbjct: 313 CKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  + V YT+LI          +A  +   M   G  P+VV+ + +++ L K G++  A
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 426

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+   M    + PN   Y+ L+ G C   K++   E+   M+   C  D  +YNILI+G
Sbjct: 427 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK+ +VE A + ++E+   G KP V TYN L  G  +    + A  +F +M  +  +A+
Sbjct: 487 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSAN 546

Query: 367 TCTYRTFIDGLCVRPQV 383
             TY   I GLC R Q+
Sbjct: 547 VVTYGALISGLCKRRQL 563



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 188/372 (50%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++N LL  L K    +  + L +++   G  PD+ TY+ LI+   K  +    + +
Sbjct: 19  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     A + V +T+LI+ L    +I +A++++  + + GC P+V+T +T+I+GL +
Sbjct: 79  FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +FK M    G       PN V YS +I GLCK   +D A E+  QMK    
Sbjct: 139 AGRIGAAVRIFKSM-EARG-----LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 192

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY  LI G C + D   A+    EM++ G +P+V + N++++  CK G  D AS 
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASH 252

Query: 249 LLDLMVQ---CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            L        C +  +  TY  ++D      KI     L   + + GC     +YN L+N
Sbjct: 253 SLAQETTINGCTI--DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK   +EEA+ L  ++   G  P VVTY +L  GL + +++  A KLF EM    +A 
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370

Query: 366 DTCTYRTFIDGL 377
           DT  Y   I  L
Sbjct: 371 DTVCYTALIREL 382



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%), Gaps = 6/317 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  ++  LAKNK  +  ++L +++ + G  P + TY+ L+N  CKMG++     +  
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I+ +   P+VVT+TSLI GL  E R  EA  LF ++   G   + + Y  LI  L +TG
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +++K MT+     G V  P+ VT S +IDGL K G +  A  +F  M+   L P
Sbjct: 387 KIPQASSVYKTMTSH----GCV--PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V Y++LIHG C A   + A  +L +M      P+ ++ N++++ LCK+G ++ A    
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++   +P+ +TYN L+ GFC  G  +    +F  M S  C  +  +Y  LI+G CK 
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKR 560

Query: 311 KEVEEALSLYNELPFKG 327
           +++ +A   +  +  +G
Sbjct: 561 RQLTKASLYFQHMKERG 577



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 181/393 (46%), Gaps = 42/393 (10%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           S++K + S G  PD+ T S +I+   K G++     IF  +     APN V +++LI GL
Sbjct: 112 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C   ++  A  +  ++K   C P+ ITYN LI+GLC++G    A   F EM         
Sbjct: 172 CKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG----- 226

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNE 210
             KP+  TY+I+I G CK G  D A     Q    N    ++ TYT+++          E
Sbjct: 227 -CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEE 285

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L+ ++   G  P + + N ++N LCK G+++ A  LL  +V     P+  TY +L+D
Sbjct: 286 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 345

Query: 271 GF--------------------------CL---------TGKINRVKELFVSMESMGCKH 295
           G                           C          TGKI +   ++ +M S GC  
Sbjct: 346 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 405

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  + + +I+G  K   +  A+ ++  +  +G+ P  V Y+ L HGL + R+ + AL++ 
Sbjct: 406 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 465

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            +M+      DT TY   IDGLC    V    A
Sbjct: 466 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 498



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 7/294 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           +I EA AL  K+ A GC P + TYN L+NGLC+ G    A++L +++ + NG       P
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTP 54

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + VTY+ +IDGL KE    +A +LF +M    L  + V YT+LI          +A  + 
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             M   G  P+VV+ + +++ L K G++  A R+   M    + PN   Y+ L+ G C  
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            K++   E+   M+   C  D  +YN+LI+G CK+ +VE A + ++E+   G KP V TY
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 336 NTLFHGLFEIRQAERAL-KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           N L  G  +    + A   L  E   N    D  TY   +D L    ++    A
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVA 288



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 6/180 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V + + ++  L+K       + +FK + + GL P+   YS LI+  CK  ++  
Sbjct: 401 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 460

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++ ++   P+ +T+  LI GLC    +  A A F ++   GC+P+V TYN LI+
Sbjct: 461 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 520

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+ G+T  A  +F +M++           N VTY  +I GLCK   + KA   F  MK
Sbjct: 521 GFCKAGNTDAACGVFDDMSSSR------CSANVVTYGALISGLCKRRQLTKASLYFQHMK 574



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 55/103 (53%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++NIL+  L K+   +   + F  +   G  PD+YTY+ILI+ FCK G       +
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 534

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           F  +  S  + NVVT+ +LI GLC   ++ +A+  F  +K  G
Sbjct: 535 FDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 203/400 (50%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ ++  L K +  D   +  +++ + G+ PD +TY+ LI  +   GQ      
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VV   +L+  LC   +I EA  +F  +   G  P+V +Y  ++NG  
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 373 TKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G++ ++V    I+N LCK G++ +A  + DL V   + P+A  YN LMDG+CL GK
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  KGIKP+ + YN 
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLFE  +   A   F EM  + +A + CTY   + GL
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 186/390 (47%), Gaps = 45/390 (11%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  YTY+IL++C  +  +  L    FG++LR+    + +  
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + L+KG C   R  EA   L  +    GC P+V +YN L+  LC  G +  A +L + M 
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  P+ V Y+ +IDG  KEG V+KA +LF +M    + P++VTY+S++H  C
Sbjct: 212 EG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALC 267

Query: 204 HAN-----------------------------------DWNEAKGLLIEMVDQGVQPNVV 228
            A                                     W EA  +  EM  Q + P+VV
Sbjct: 268 KARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 327

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +M  LCK GK+  A  + D M      P+ F+Y  +++G+   G +  + +LF  M
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   D +++N+LI  Y     +++A+ ++NE+   G+KP VVTY T+   L  I + 
Sbjct: 388 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + A++ F +M    V  D   Y   I G C
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+G L K         +F  +   G  PD+++Y+I++N +   G +     +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    AP++ TF  LIK       + +A  +F +++  G +P+V+TY T+I  LCR
Sbjct: 384 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+  F +M +     GVV  P+   Y  +I G C  G + KAKEL  ++    +
Sbjct: 444 IGKMDDAMEKFNQMIDQ----GVV--PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++V + S+I+  C      +A+ +    V+ G+ P+ V  N++M+  C  GKM+ A R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV   + PN   Y TL++G+C  G+I+    LF  M   G K     YNI+I+G  
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +      A   ++E+   GI     TY+ +  GLF+ R  + A+ LF E++  +V  D  
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 369 TYRTFIDGL 377
           T  T I G+
Sbjct: 678 TLNTMIAGM 686



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 179/374 (47%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+ I+L   A       +  LF  +   G+ PD+YT+++LI  +   G + 
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 413

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   Y+ LI
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +  II+ LCK G V  A+ +F   
Sbjct: 474 QGFCTHGSLLKAKELISEIMNNGMRLDIVF------FGSIINNLCKLGRVMDAQNIFDLT 527

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+ V Y  L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   YN ++DG    G+    K  F  M   G   +  +Y+I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 364 AADTCTYRTFIDGL 377
                TY   I  L
Sbjct: 708 VPCAVTYSIMITNL 721



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 208/452 (46%), Gaps = 85/452 (18%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S+NILL  L    K+   D +L +     ++   PD+  Y+ +I+ 
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-CSPDVVAYNTVIDG 230

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT++S++  LC    + +A A   ++   G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ V  + ++  LCK G + +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPDVVALNTLMGSLCKYGKIKE 344

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +YT +++G+                                 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK----------- 294
           + + Y+ L+ GFC  G + + KEL   + + G               CK           
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 295 ---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                     D   YN+L++GYC   ++E+AL +++ +   GI+P VV Y TL +G  +I
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +  L LF EM    +   T  Y   IDGL
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 173/359 (48%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN+L+   A     D  + +F  +   G+ P + TY  +I   C++G++      
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+   +  LI+G C    +++A  L +++   G   +++ + ++IN LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F    N      V   P+ V Y++++DG C  G ++KA  +F  M    +
Sbjct: 514 LGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y +L++G+C     +E   L  EM+ +G++P+ +  N+I++ L + G+   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  N  TY+ ++ G       +    LF  + +M  K D  + N +I G  
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + + VEEA  L+  +   G+ P  VTY+ +   L +    E A  +F  MQ      D+
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 175/390 (44%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y  LI  FC  G +  
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F S+I  LC   R+++A  +F      G  P+ + YN L++
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIGRIDEGLSLFREML 598

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+ + Y  +I G   A     AK    EM + G+  N  + ++++  L KN   D
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ +  T NT++ G   T ++   K+LF S+   G      +Y+I+I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 719 TNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R Q+RF  A+
Sbjct: 779 LEHLTAMLLVDLFSSKGTC-REQIRFLPAK 807



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 145

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            + +  S ++ G C+    D+A ++ L    E    P+V +Y  L+   C+     +A  
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+ N +++   K G ++ A  L   MVQ  + P+  TY++++  
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M + G   D+++YN LI GY    + +EA+ ++ E+  + I P 
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VV  NTL   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 201/377 (53%), Gaps = 14/377 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ILL  L+ +       +LF   +++   PD+ TY++L++ +CK+GQ      +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSL 230

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              IL++ + PNV T++ +I   C   ++ EA  +F K+    C PN +T+NTLI G C+
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 290

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQMKYEN 187
            G    A+ LF EM     +IG   K   VTY+ +ID LCK+ G V  A +LF +++   
Sbjct: 291 AGMLEDAIKLFAEME----KIGC--KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P +VTY SLI GFC A   +EA     EM +    PNV++ +++++ LCK  +M  A+
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAA 403

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           + L+ M      P   TY  L++GFC  G++      F  M+  GC  +   +N LI+G 
Sbjct: 404 KTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGL 463

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK +   + L L   +  +G KP V+TYN L  GL    + E A +LF    G   A + 
Sbjct: 464 CKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---DGMACAPNV 520

Query: 368 CTYRTFIDGLCVRPQVR 384
            T+   I GLC + +V 
Sbjct: 521 TTFNFLIRGLCAQKKVE 537



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 203/402 (50%), Gaps = 46/402 (11%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           N LL  L   + +D  L LFK + + GLF P+ +TY++LI  FCK GQ+     +F  + 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLA-GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S   PN  T  +L+ GLC   ++  A  LF +++A    P   ++N L+ G    G   
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG----FVDKAKELFLQMKYENL- 188
            AL   ++M   +  +       T TY++++ GLC E      +++A E F +MK   + 
Sbjct: 120 DALAHLQDMRKSSSSVA------TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173

Query: 189 -------------------------------NPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                                          +P+++TY  L+ G+C      EA+ L+ E
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           ++  G +PNV + ++I+N  CK  K++ A  +   M++ +  PNA T+NTL+ GFC  G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNK-EVEEALSLYNELPFKGIKPTVVTYN 336
           +    +LF  ME +GCK    +YN LI+  CK +  V  A+ L+N+L   G+ PT+VTYN
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L  G  + R+   A++ F EM+G   A +  TY   IDGLC
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLC 394



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+L+    K        SL K +   G  P+++TYSI+INC+CK+ +V   + +
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF +LI G C    + +A  LF +++  GC+  ++TYNTLI+ LC+
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 129 T-GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++LF ++       G    P  VTY+ +I G C    + +A + F +M+ + 
Sbjct: 326 KRGGVYTAVDLFNKLE------GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK- 378

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PNV+TY+ LI G C      EA   L +M   G  P VV+   ++N  CK G++ +A 
Sbjct: 379 CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSAL 438

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
              + M      PN   +NTL+DG C   + N    L   M + GCK D  +YN LI+G 
Sbjct: 439 LFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGL 498

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           C    VE+A  L++ +      P V T+N L  GL   ++ E A
Sbjct: 499 CSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 11  VSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           + ++N L+  L K +    T + LF +L   GL P + TY+ LI  FC   ++S     F
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF 372

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +   C APNV+T++ LI GLC   R+ EAA     +KA G  P V+TY  LING C+ 
Sbjct: 373 DEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    AL  F++M            PNTV ++ +IDGLCK    +    L   M  E   
Sbjct: 432 GELKSALLFFEKMKLAG------CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCK 485

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V+TY  LI G C AN   +A+ L   M      PNV + N ++  LC   K++ A  +
Sbjct: 486 PDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNI 542

Query: 250 LD 251
           LD
Sbjct: 543 LD 544



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N L+ G     K ++   LF  + +     +  +YN+LI G+CK  ++ +A+S+++++  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
            G+ P   T NTL  GL EI Q   ALKLF EMQ       + ++   + G  +  +VR 
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 386 TYAR----RKGNS 394
             A     RK +S
Sbjct: 121 ALAHLQDMRKSSS 133



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+    K     + L  F+++   G  P+   ++ LI+  CK  + + 
Sbjct: 412 HGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAND 471

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G  +   +      P+V+T+  LI GLC+ +R+ +A  LF       C PNV T+N LI 
Sbjct: 472 GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---DGMACAPNVTTFNFLIR 528

Query: 125 GLCRTGHTIVALNLF 139
           GLC       A N+ 
Sbjct: 529 GLCAQKKVEEARNIL 543


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SFNIL+   A+ +  D  ++ F+ +      PDL+T+ IL++C CK G     F +
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211

Query: 69  FGRILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  ++   F P +    T++++ L    R+ EA  +F +++  G  P+ I YNT+I+GL 
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL +   M      +     P  VTY I+++ LCK G +++A+ELF  M    
Sbjct: 272 KAGHAQEALKVLDNM------LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN V YTSLIHGF  +    EA  L  EMV+ G +P+V++  V+++ LCK+G  + A+
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +  + M++   +PN  TY T++ G    G++     +   M + GC  D  +Y  L++G+
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGF 445

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL-KLFVEMQGNDVAAD 366
           CK   ++EA  L +EL      P +  Y++L +GL +    E+ L  LF + +      D
Sbjct: 446 CKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLD 505

Query: 367 TCTYRTFIDGLC 378
                + I GLC
Sbjct: 506 PGLCCSIIVGLC 517



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 188/381 (49%), Gaps = 13/381 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N ++  LAK  H    L +   + +    P   TY IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +  S F PN V +TSLI G     R+ EA +LF ++   G  P+VIT+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++G+   A   F+EM  G        KPN VTY+ II GL K G V  A  +   M    
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VTY  L+ GFC     +EA  LL E+      PN+   + ++N LC  G ++   
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT- 489

Query: 248 RLLDLMVQCDVRPNAFTYN---TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            L DL  Q              +++ G C TG+++    +F  M S GCK D  +YNILI
Sbjct: 490 -LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 305 NGYCKNKE--VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           NG C+++E  VE A +L ++L   G  P  VTY  L  GL +I + +RA+K+  E     
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
             AD   Y     GLC + QV
Sbjct: 609 WNADVVAYTALCTGLCYQGQV 629



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 192/408 (47%), Gaps = 45/408 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L+K         + K + + G FPD  TY  L++ FCK+G++     +
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLC-------------------AES-------------- 95
              + +   +PN+  ++SL+ GLC                   AE+              
Sbjct: 458 LDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC 517

Query: 96  ---RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV--ALNLFKEMTNGNGEIG 150
              R+ EA  +F ++ + GC+P+  TYN LINGLCR+    V  A  L  ++        
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK------ 571

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V + P+ VTY+ +  GLCK G VD+A ++  +      N +VV YT+L  G C+    + 
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  EMV QG  P+  +   I+N L K  K+++A +  D M+    +P   TY  L+ 
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691

Query: 271 GFCLTGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
             C  G ++     F SM + G        Y+ LI+G+CK  +V+ AL L+ ++  +G  
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           PT VT  +LF GL    + E+A +L  EM          T+   +DGL
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 172/351 (49%), Gaps = 6/351 (1%)

Query: 29  TVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           T +S F+      G   D++TY+ L+N        S  + I   +L++  APN  +F  L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I+      R  +A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM     
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM---- 216

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            +G V  P+   ++ ++  L K   V +A+E+F QM+     P+ + Y ++I G   A  
Sbjct: 217 AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             EA  +L  M+ +   P  V+  +++N LCK G ++ A  L  +M     RPN+  Y +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ GF  +G++     LF  M   G + D  ++ ++I+G CK+   E+A   + E+   G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KP VVTY T+  GL +I +   A ++   M  +    D+ TY   +DG C
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGFVIFGRI 72
           +I++G L K    D    +F+R+ S G  PD  TY+ILIN  C+    +V   F +   +
Sbjct: 511 SIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +  + P+ VT+T L  GLC    +  A  +  +  + G   +V+ Y  L  GLC  G  
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++LF+EM    G       P+   Y  II+GL K   ++ A + F +M  +   P V
Sbjct: 630 DRAVSLFQEMVRQGG------APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            TYT+L+   CHA + +EA      M+ +G +  +V+  + +++  CK  K+D A +L +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M+     P A T  +L DG   +GK  + +EL   M + G      ++  +++G  K+ 
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 312 EVEEALSLYNE 322
           E  + L L  E
Sbjct: 804 ESGKLLKLVQE 814


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 184/376 (48%), Gaps = 23/376 (6%)

Query: 16  ILLGCLAKNKHYDTVLS-------------LFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +L+GC A    +D V+              L  R+ + G  P + TY  L+   C++ Q 
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                + GR+       NVV F ++I G  AE ++ EA  L+  +   GC+P+  TY+ L
Sbjct: 281 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++GLC+ G    A+ L +EM          F PN VTY+I++   CK G  D  + L  +
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + L  N   Y  +I+  C     +EA GL+ EM  QG  P++ S N I+  LC N +
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M+ A  + + +++  V  N  TYNT++      G+      L   M   GC  D  SYN 
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 510

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI   CK+  V+ +L L  E+  KGIKP  V+YN L   L + R+   AL+L  +M    
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570

Query: 363 VAADTCTYRTFIDGLC 378
           +A D  TY T I+GLC
Sbjct: 571 LAPDIVTYNTLINGLC 586



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 174/343 (50%), Gaps = 8/343 (2%)

Query: 14  FNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN ++G CLA+ K  +    L++ +   G  PD +TYSIL++  CK+G++     +   +
Sbjct: 298 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +  FAPNVVT+T ++   C      +  AL  ++ A G   N   YN +I  LC+ G  
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ L +EM +          P+  +Y+ II  LC    +++A+ +F  +  E +  N 
Sbjct: 417 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY ++IH       W +A  L  EM+  G   +VVS N ++  +CK+G +D +  LL+ 
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++PN  +YN L+   C   ++    EL   M + G   D  +YN LING CK   
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  AL+L  +L  + + P ++TYN L     ++R  + A  L 
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N L+  + K+ + D  L L + +   G+ P+  +Y+ILI+  CK  +V     +  
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           ++L    AP++VT+ +LI GLC    +  A  L  KL      P++ITYN LI+  C+
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NIL+  L K +     L L K++ + GL PD+ TY+ LIN  CKMG +     +  ++
Sbjct: 542 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
                 P+++T+  LI   C    + +AA L  +  A  C
Sbjct: 602 HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 38/87 (43%)

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           F++ +     C+    +EAL+L   +   G  P  V Y T+ H L +      A  L  E
Sbjct: 160 FTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNE 219

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           M     AAD  T+   + G+C   +VR
Sbjct: 220 MLLMGCAADVNTFDDVVRGMCGLGRVR 246


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 190/379 (50%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +    LF+ +   G+ P +YTY+ILI+ FCK G +      
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +LR    PNVVT+TSLI       ++ +A  LF  +   G +PNV+TY  LI+G C+
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 129 TGHTIVALNLFKEMTNG--NGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  ++  M     + +I + FK        PN +TY  ++DGLCK   V++A E
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC       A+ + ++M ++G  PN+ + + ++N L 
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  ++D   ++L  M++    PN   Y  ++DG C  GK      L + ME +GC  +  
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVI 750

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+G+ K  ++E+ L LY ++  KG  P  +TY  L +        + A +L  EM
Sbjct: 751 TYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +         +YR  I+G 
Sbjct: 811 KQTYWPRHISSYRKIIEGF 829



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 183/375 (48%), Gaps = 22/375 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    +   + S G  PD  TYS +I   C   +V   F++F  + ++   P
Sbjct: 427 CLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVP 486

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A   F ++    C PNV+TY +LI+   +      A  LF
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK----------YENLN 189
            EM    G      KPN VTY+ +IDG CK G +DKA +++ +M+          Y  L+
Sbjct: 547 -EMMLLEGS-----KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLD 600

Query: 190 ------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 PN++TY +L+ G C AN   EA  LL  M   G +PN +  + +++  CK GK+
Sbjct: 601 DNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKL 660

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +NA  +   M +    PN +TY++L++      +++ V ++   M    C  +   Y  +
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK  + EEA  L  ++   G  P V+TY  +  G  +I + E+ L+L+ +M     
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGC 780

Query: 364 AADTCTYRTFIDGLC 378
           A +  TYR  I+  C
Sbjct: 781 APNFITYRVLINHCC 795



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 192/457 (42%), Gaps = 88/457 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N ++  L +   +   + +  R+ SI   P++ TY IL++     GQ+     I
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN   F SL+   C       A  LF K+   GC+P  + YN  I  +C 
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICS 389

Query: 129 T----GHTIVAL--NLFKEMTN------------------GNGEIGVVFK---------- 154
                G  ++ L    + EM +                  G G+    F+          
Sbjct: 390 NEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGF 449

Query: 155 -PNTVTYS-----------------------------------IIIDGLCKEGFVDKAKE 178
            P+  TYS                                   I+ID  CK G + +A+ 
Sbjct: 450 VPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARN 509

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
            F +M  +N  PNVVTYTSLIH +  A    +A  L   M+ +G +PNVV+   +++  C
Sbjct: 510 WFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHC 569

Query: 239 KNGKMDNASRLLDLMVQCDVR-----------------PNAFTYNTLMDGFCLTGKINRV 281
           K G++D A ++   M Q D+                  PN  TY  L+DG C   ++   
Sbjct: 570 KAGQIDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            EL  +M   GC+ +   Y+ LI+G+CK  ++E A  ++ ++  +G  P + TY++L + 
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           LF+ ++ +  LK+  +M  N    +   Y   IDGLC
Sbjct: 689 LFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 192/425 (45%), Gaps = 67/425 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K +       LF+ +   G  P++ TY+ LI+  CK GQ+     I
Sbjct: 521 PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQI 580

Query: 69  FGRIL----------------RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+                   C  PN++T+ +L+ GLC  +R+ EA  L   +   GC
Sbjct: 581 YARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGC 640

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFK--------- 154
           EPN I Y+ LI+G C+TG    A  +F +M+           +  I  +FK         
Sbjct: 641 EPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLK 700

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN V Y+ +IDGLCK G  ++A  L L+M+     PNV+TYT++I GF 
Sbjct: 701 VLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFG 760

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
                 +   L  +M  +G  PN ++  V++N  C  G +D A RLLD M Q     +  
Sbjct: 761 KIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS 820

Query: 264 TYNTLMDGF-----CLTGKINRVKE-LFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +Y  +++GF        G ++ + E   V +ES+        Y ILI+ + K   +E AL
Sbjct: 821 SYRKIIEGFNREFITSIGLLDELSENESVPVESL--------YRILIDNFIKAGRLEGAL 872

Query: 318 SLYNELPFKGIKPTVVT-----YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +L  E+      P++       Y +L   L    + ++A +L+  M   +V  +  T+  
Sbjct: 873 NLLEEI---SSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVH 929

Query: 373 FIDGL 377
            I GL
Sbjct: 930 LIKGL 934



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 173/376 (46%), Gaps = 19/376 (5%)

Query: 18  LGCLA----KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           LGC A    K       LSL ++   +   PD   Y+ +++  C+         I  R+ 
Sbjct: 243 LGCFAYSLCKAGRCGDALSLLEKEEFV---PDTVFYNRMVSGLCEASLFQEAMDILDRMR 299

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVT+  L+ G   + ++     + + +   GC PN   +N+L++  C++    
Sbjct: 300 SISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYS 359

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK------EGFVDKAKELFLQMKYEN 187
            A  LFK+M      I    +P  + Y+I I  +C          ++ A++ + +M    
Sbjct: 360 YAYKLFKKM------IKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLG 413

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  N V  ++     C A  +++A  ++ EM+ +G  P+  + + ++  LC   K++ A 
Sbjct: 414 VVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAF 473

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L + M +  + P+ +TY  L+D FC  G I + +  F  M    C  +  +Y  LI+ Y
Sbjct: 474 LLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAY 533

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K ++V +A  L+  +  +G KP VVTY  L  G  +  Q ++A +++  MQG+  ++D 
Sbjct: 534 LKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDI 593

Query: 368 CTYRTFIDGLCVRPQV 383
             Y    D  C  P +
Sbjct: 594 DMYFKLDDNDCETPNI 609



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 155/315 (49%), Gaps = 16/315 (5%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ L+    K    +    +F +++  G  P+LYTYS LIN   K  ++ L   +  ++L
Sbjct: 647 YDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKML 706

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +   PNVV +T +I GLC   +  EA  L  K++  GC PNVITY  +I+G  + G   
Sbjct: 707 ENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIE 766

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
             L L+++M +          PN +TY ++I+  C  G +D+A  L  +MK      ++ 
Sbjct: 767 QCLELYRDMCSKGC------APNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS 820

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y  +I GF    ++  + GLL E+ +    P      ++++   K G+++ A   L+L+
Sbjct: 821 SYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGA---LNLL 875

Query: 254 VQCDVRP-----NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +    P     N + Y +L++      K+++  EL+ SM +     +  ++  LI G  
Sbjct: 876 EEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLT 935

Query: 309 KNKEVEEALSLYNEL 323
           +  + +EAL L + +
Sbjct: 936 RVGKWQEALQLSDSI 950



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 153/412 (37%), Gaps = 105/412 (25%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI+  C       A     +LK FG + +  TYN LI    R      A  + +EM+N  
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 147 ------------------GEIGVV--------FKPNTVTYSIIIDGLCKEGFVDKAKELF 180
                             G  G          F P+TV Y+ ++ GLC+     +A ++ 
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDIL 295

Query: 181 LQMKYENLNPNVVTY-----------------------------------TSLIHGFCHA 205
            +M+  +  PNVVTY                                    SL+H +C +
Sbjct: 296 DRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKS 355

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN------------------------- 240
            D++ A  L  +M+  G QP  +  N+ +  +C N                         
Sbjct: 356 RDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVV 415

Query: 241 ----------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
                           GK D A  ++  M+     P+  TY+ ++   C   K+ +   L
Sbjct: 416 LNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLL 475

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M+  G     ++Y ILI+ +CK   +++A + ++E+      P VVTY +L H   +
Sbjct: 476 FEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLK 535

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YARRKGN 393
            R+   A KLF  M       +  TY   IDG C   Q+      YAR +G+
Sbjct: 536 ARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGD 587



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 37/293 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L K K  D VL +  ++      P++  Y+ +I+  CK+G+    + +
Sbjct: 677 PNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRL 736

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNV+T+T++I G     +I +   L+  + + GC PN ITY  LIN  C 
Sbjct: 737 MLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCS 796

Query: 129 TGHTIVALNLFKEMTNG----------------NGE----IGVVFK-------PNTVTYS 161
           TG    A  L  EM                   N E    IG++ +       P    Y 
Sbjct: 797 TGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYR 856

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-----YTSLIHGFCHANDWNEAKGLLI 216
           I+ID   K G ++ A  L  ++   + +P++       YTSLI    HA+  ++A  L  
Sbjct: 857 ILIDNFIKAGRLEGALNLLEEI---SSSPSLAVANKYLYTSLIESLSHASKVDKAFELYA 913

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNT 267
            M+++ V P + +   ++  L + GK   A +L D + Q  C V  N   Y T
Sbjct: 914 SMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHVCSNFVNYKT 966



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 16/263 (6%)

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+   RTG      N  ++      E  VV   N V +       C E F+  ++    Q
Sbjct: 75  ISNAIRTGFGAETQNFLRQFRGRLSEPLVVEVMNLVKHP----EFCVEFFLWASR----Q 126

Query: 183 MKYENLNPNVVTYTSLIHGFC--HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           + Y +     V Y +LI   C    N+   +   L+++ D   +      N ++ + C+N
Sbjct: 127 IGYSH---TPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRN 183

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G  + A   L  +     + +  TYN L+  F    K++    +   M + G + D  + 
Sbjct: 184 GMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTL 243

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
                  CK     +ALSL  +  F    P  V YN +  GL E    + A+ +   M+ 
Sbjct: 244 GCFAYSLCKAGRCGDALSLLEKEEF---VPDTVFYNRMVSGLCEASLFQEAMDILDRMRS 300

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
                +  TYR  + G   + Q+
Sbjct: 301 ISCIPNVVTYRILLSGCLGKGQL 323



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 88/242 (36%), Gaps = 7/242 (2%)

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFV-DKAKELFL-QMKYENLNPNVVTYTSLIHGFCHA 205
           +IG    P  V Y+ +I+ LC      D+    FL Q++ ++          LI   C  
Sbjct: 126 QIGYSHTP--VVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRN 183

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             WN A   L  + D G + +  + N ++    +  K+D A  +   M     R +  T 
Sbjct: 184 GMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTL 243

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
                  C  G+      L    E +    D   YN +++G C+    +EA+ + + +  
Sbjct: 244 GCFAYSLCKAGRCGDALSLLEKEEFVP---DTVFYNRMVSGLCEASLFQEAMDILDRMRS 300

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
               P VVTY  L  G     Q  R  ++   M       +   + + +   C      +
Sbjct: 301 ISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSY 360

Query: 386 TY 387
            Y
Sbjct: 361 AY 362


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 184/376 (48%), Gaps = 23/376 (6%)

Query: 16  ILLGCLAKNKHYDTVLS-------------LFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +L+GC A    +D V+              L  R+ + G  P + TY  L+   C++ Q 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                + GR+       NVV F ++I G  AE ++ EA  L+  +   GC+P+  TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++GLC+ G    A+ L +EM          F PN VTY+I++   CK G  D  + L  +
Sbjct: 353 MHGLCKLGRIGSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + L  N   Y  +I+  C     +EA GL+ EM  QG  P++ S N I+  LC N +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M+ A  + + +++  V  N  TYNT++      G+      L   M   GC  D  SYN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI   CK+  V+ +L L  E+  KGIKP  V+YN L   L + R+   AL+L  +M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 363 VAADTCTYRTFIDGLC 378
           +A D  TY T I+GLC
Sbjct: 587 LAPDIVTYNTLINGLC 602



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 174/343 (50%), Gaps = 8/343 (2%)

Query: 14  FNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN ++G CLA+ K  +    L++ +   G  PD +TYSIL++  CK+G++     +   +
Sbjct: 314 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +  FAPNVVT+T ++   C      +  AL  ++ A G   N   YN +I  LC+ G  
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ L +EM +          P+  +Y+ II  LC    +++A+ +F  +  E +  N 
Sbjct: 433 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY ++IH       W +A  L  EM+  G   +VVS N ++  +CK+G +D +  LL+ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++PN  +YN L+   C   ++    EL   M + G   D  +YN LING CK   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  AL+L  +L  + + P ++TYN L     ++R  + A  L 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 36/302 (11%)

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           + FG +P+  +YN +++ L R      AL L++ M + +        P T T+ +    L
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD-----RVPPTTFTFGVAARAL 185

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+ G  D+A  L   M      P+ V Y ++IH  C      EA  LL EM+  G   +V
Sbjct: 186 CRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADV 245

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC-------------- 273
            + + ++  +C  G++  A+RL+D M+     P   TY  L+ G C              
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 305

Query: 274 -----------------LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
                              GK+    EL+ +M   GC+ D  +Y+IL++G CK   +  A
Sbjct: 306 VPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSA 365

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + L  E+  KG  P VVTY  + H   +    +    L  EM    +  ++  Y   I  
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425

Query: 377 LC 378
           LC
Sbjct: 426 LC 427



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N L+  + K+ + D  L L + +   G+ P+  +Y+ILI+  CK  +V     +  
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           ++L    AP++VT+ +LI GLC    +  A  L  KL      P++ITYN LI+  C+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NIL+  L K +     L L K++ + GL PD+ TY+ LIN  CKMG +     +  ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
                 P+++T+  LI   C    + +AA L  +  A  C
Sbjct: 618 HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 65/178 (36%), Gaps = 41/178 (23%)

Query: 213 GLLIEMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFTYN 266
           G  + ++DQ     GVQP+  S NV+++ L +     +A  L   MV  D V P  FT+ 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
                 C  G+                                    +EAL+L   +   
Sbjct: 180 VAARALCRLGR-----------------------------------ADEALALLRGMARH 204

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G  P  V Y T+ H L +      A  L  EM     AAD  T+   + G+C   +VR
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 190/376 (50%), Gaps = 9/376 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H + P   S+  L+  L   +     + L + + + G+ PD+ TY  LI   C    V  
Sbjct: 107 HETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDK 166

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +  S   PNVV ++ L++G C   R    + +F ++   G EP+V+ Y  LI+
Sbjct: 167 AVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LCR G    A  +  +M           +PN VTY+++I+ +CKEG V +A  L   M 
Sbjct: 227 SLCREGKVKKATQVMDKMMERG------LEPNVVTYNVLINSMCKEGSVKEAMSLRNNML 280

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELCKNGK 242
            + +  + VTY +LI G     + +EA GLL EM+  +  V+PNVV+ N +++ LCK G+
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGR 340

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M  A ++ D+M +     N  T+N L+ G     K+ +  EL   M S G + D F+Y+I
Sbjct: 341 MRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LING+CK  +V+ A SL +++   GI+P +V Y  L   L E    E+A   F EM  N 
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN- 459

Query: 363 VAADTCTYRTFIDGLC 378
              D   Y T I G C
Sbjct: 460 CKLDVVAYSTMIHGAC 475



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 179/394 (45%), Gaps = 40/394 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ LL    K   ++ V  +F+ ++  G+ PD+  Y+ LI+  C+ G+V     +
Sbjct: 181 PNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQV 240

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     PNVVT+  LI  +C E  + EA +L   +   G   + +TYNTLI GL  
Sbjct: 241 MDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSG 300

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
                 A+ L +EM +G      + +PN VT++ +I GLCK G                 
Sbjct: 301 VLEMDEAMGLLEEMIHGE----TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356

Query: 173 -------------------VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                              V KA EL  +M    L P+  TY+ LI+GFC     + A+ 
Sbjct: 357 ACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAES 416

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M   G++P +V    ++  LC+ G M+ A    D M + + + +   Y+T++ G C
Sbjct: 417 LLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGAC 475

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                   +E    M   G   D  +Y++LIN +  + ++  A  +  ++   G  P V 
Sbjct: 476 RLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVA 535

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +++L  G       E+ L+L  EM   D+A D+
Sbjct: 536 VFDSLIKGYGAKGDTEKVLELIREMTAKDIALDS 569



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 13/295 (4%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VALNLFKEMTNGNGEIGVVFKPNT 157
           E+ AL + L +     + ++YNT++  LCR G  +  AL L + M +         +P  
Sbjct: 64  ESPALLSSLPSV---RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHET-------RPTA 113

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V+Y+ ++  LC E    +A  L   M+   + P+VVTY +LI G C A D ++A  LL E
Sbjct: 114 VSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M + G++PNVV  + ++   CK G+ +  S++ + M    + P+   Y  L+D  C  GK
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +  ++   M   G + +  +YN+LIN  CK   V+EA+SL N +  KG+    VTYNT
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNT 293

Query: 338 LFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRTFIDGLCVRPQVRFTYARR 390
           L  GL  + + + A+ L  EM   +  V  +  T+ + I GLC   ++R  +  R
Sbjct: 294 LITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L K         +   +   G   +L T+++LI    ++ +V     +
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   P+  T++ LI G C   ++  A +L +K++  G EP ++ Y  L+  LC 
Sbjct: 383 MDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCE 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A N F EM           K + V YS +I G C+      A+E    M  E L
Sbjct: 443 QGMMEQARNFFDEMHKN-------CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY+ LI+ F ++ D   A+ +L +M   G  P+V   + ++      G  +    
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555

Query: 249 LLDLMVQCDVRPNAFTYNTL 268
           L+  M   D+  ++   +T+
Sbjct: 556 LIREMTAKDIALDSKIISTI 575


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS-LGFV 67
           P V ++NIL+ C  + +      +LF R    GL  D+   SIL+ C     +   +  +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLING 125
           +  R+      P+ +++ +++K LC +SR   A  L   +  K+ GC PNV+TYNT+I+G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G    A NLF EM     + GVV  P+ VTY+ IID LCK   +DKA+ +  QM  
Sbjct: 237 LFREGEVSKACNLFHEMM----QQGVV--PDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN VTY  +IHG+  +  W E  G+  EM  QG+ PN+V+ N  M+ LCK+GK   
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+   D M     +PN  TY+ L+ G+   G    +  LF SME  G   D   +NI+I+
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            Y K   ++E + ++ ++  +G+ P   TY  +      + +   A+  F +M    +  
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 366 DTCTYRTFIDGLCV 379
           +   Y + I G C+
Sbjct: 471 EGIVYHSLIQGFCM 484



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 200/403 (49%), Gaps = 36/403 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K +  D    + +++ S G  P+  TY+ +I+ +   GQ      +
Sbjct: 260 PDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGM 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN+VT  S +  LC   +  EAA  F  + A G +PN++TY+ L++G   
Sbjct: 320 FREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYAT 379

Query: 129 TGHTIVALNLFKEMTNGNG--------------------------------EIGVVFKPN 156
            G  +  LNLF  M  GNG                                E GV+  P+
Sbjct: 380 EGCFVDMLNLFNSM-EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVI--PD 436

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY I+I    + G +  A + F QM    L P  + Y SLI GFC   +  +AK L+ 
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVS 496

Query: 217 EMVDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           EM+ +G+ +PN+V  N I+N LCK G++  A  + D ++    RP+  T+N+L+DG+ L 
Sbjct: 497 EMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLV 556

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GKI +   +  +M S G + D  SYN LI+GYC+N  +++ L L+ E+  KG+KPT +TY
Sbjct: 557 GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITY 616

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + HGLF   +   A K+  EM  +    D  T    + GLC
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 188/369 (50%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++++LL   A    +  +L+LF  +   G+  D   ++I+I+ + K G +    +I
Sbjct: 365 PNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLI 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+  T+  +I       R+ +A   F ++ A G +P  I Y++LI G C 
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCM 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ + A  L  EM +       + +PN V ++ II+ LCKEG V +A ++F  + +   
Sbjct: 485 HGNLVKAKELVSEMMSRG-----IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGE 539

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+T+ SLI G+       +A G+L  M+  G++P+VVS N +++  C+NG++D+   
Sbjct: 540 RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLI 599

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V+P   TY  ++ G    G+    K++   M   G   D  +  I++ G C
Sbjct: 600 LFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA++++ +L    +K  +   NT+   ++++R+ E A +LF  +    +  +  
Sbjct: 660 RNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAS 719

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 720 TYGVMIKNL 728



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 30/386 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNI++    K    D  + +F ++   G+ PD  TY I+I  F +MG+++     F +++
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                P  + + SLI+G C    +V+A  L +++ + G   PN++ +N++IN LC+ G  
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524

Query: 133 IVALNLFK---------------EMTNGNGEIGVVFK--------------PNTVTYSII 163
           + A ++F                 + +G G +G + K              P+ V+Y+ +
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG C+ G +D    LF +M  + + P  +TY  ++HG  +      AK +  EM++ G 
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
             ++ +  +I+  LC+N   D A  +   +   +V+ N    NT++D      K    KE
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKE 704

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           LF S+ + G   +  +Y ++I    K   VEEA ++++ +   G  P+    N +   L 
Sbjct: 705 LFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLL 764

Query: 344 EIRQAERALKLFVEMQGNDVAADTCT 369
           E  +  +A     ++ G  ++ +  T
Sbjct: 765 EKGEIVKAGNYMFKVDGKRISLEAST 790



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA-SR 248
           P V TY  L+   C          L    +  G++ +V+ +++++  L    + D+  + 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILING 306
           LL  M +  V P+  +YNT++   C   +  R  +L  +M  +S GC  +  +YN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +  EV +A +L++E+  +G+ P VVTY ++   L + R  ++A  +  +M  N    +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 367 TCTYRTFIDGLCVRPQVRFT 386
             TY   I G  +  Q + T
Sbjct: 297 KVTYNCMIHGYSISGQWKET 316



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 29/276 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+         +    +   + S G+ PD+ +Y+ LI+ +C+ G++  G ++
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +L     P  +T+  ++ GL  + R V A  +  ++   G   ++ T   ++ GLCR
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660

Query: 129 TGHTIVALNLFKEMTNGNGE---------IGVVFK--------------------PNTVT 159
                 A+ +FK++   N +         I  ++K                    PN  T
Sbjct: 661 NNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAST 720

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y ++I  L KEG V++A  +F  M+     P+      +I       +  +A   + ++ 
Sbjct: 721 YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVD 780

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            + +     + +++M    + GK     +LL    Q
Sbjct: 781 GKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/371 (34%), Positives = 201/371 (54%), Gaps = 10/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L  LA+N+    V  LF+ L +    P+++T++I+I+  CK G++     
Sbjct: 165 PPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARA 220

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+     +P+VVT+ SLI G      + E   L ++++  GC  +V+TYN LIN   
Sbjct: 221 LFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFS 280

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A + F EM      +GV+   N VT S  +D  CKEG V +A +LF QM+   
Sbjct: 281 KFGWIEKAYSYFGEMK----RLGVM--ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN  TYTSL+ G C A   ++A  LL EMV QG+ PNVV+  V+++ LCK GK+  A 
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L LM +  V+ N   Y TL+ G  +     R  +L   M++ G + D   Y  LI G 
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK ++++EA SL +++   G++P  V Y T+    F+  +   A+ L  ++  + +  + 
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514

Query: 368 CTYRTFIDGLC 378
            TY   IDGLC
Sbjct: 515 VTYCALIDGLC 525



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    + V  L   +   G   D+ TY+ LINCF K G +   +  
Sbjct: 232 PDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSY 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG + R     NVVT ++ +   C E  + EA  LF +++  G  PN  TY +L++G C+
Sbjct: 292 FGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  EM +     G+V  PN VTY++++DGLCKEG V  A ++   M+   +
Sbjct: 352 AGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV 405

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + YT+LIHG     +   A  LL EM ++G++ +V     ++  LCK  K+D A  
Sbjct: 406 KANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKS 465

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M  C +RPN   Y T+MD F   GK +    L   +   G + +  +Y  LI+G C
Sbjct: 466 LLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLC 525

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA+S ++++   G+ P V  Y TL  G  +I    +A+ L  EM    ++ D  
Sbjct: 526 KAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKV 585

Query: 369 TYRTFIDG 376
            Y + IDG
Sbjct: 586 VYTSLIDG 593



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 172/345 (49%), Gaps = 6/345 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            + LF ++   G+ P+ +TY+ L++  CK G++    V+   ++     PNVVT+T ++ 
Sbjct: 323 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 382

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           GLC E ++  A  + + ++  G + N + Y TLI+G     ++  AL+L  EM N   E+
Sbjct: 383 GLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL 442

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            V        Y  +I GLCK   +D+AK L  +M    L PN V YT+++  F  A   +
Sbjct: 443 DVSL------YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL ++ D G+QPNVV+   +++ LCK G +  A    D M +  + PN   Y TL+
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           DGFC  G +++   L   M   G   D   Y  LI+G+ K  +++ A +L  ++   G++
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             +  Y     G   +   + A  +  EM G  +  D   Y   I
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 153/335 (45%), Gaps = 47/335 (14%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+V  F +L+  L     + +A     +++     PN  T N ++  L R     +   L
Sbjct: 133 PSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 190

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F+ +            PN  T++I+ID LCK+G + +A+ LF++MK    +P+VVTY SL
Sbjct: 191 FEHLP----------APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSL 240

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I G+    +  E + L+ EM   G   +VV+ N ++N   K G ++ A      M +  V
Sbjct: 241 IDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV 300

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
             N  T +T +D FC  G +    +LF  M   G   ++F+Y  L++G CK   +++A+ 
Sbjct: 301 MANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 360

Query: 319 LYNELPFKGIKPTVVT-----------------------------------YNTLFHGLF 343
           L +E+  +G+ P VVT                                   Y TL HG F
Sbjct: 361 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHF 420

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + +ERAL L  EM+   +  D   Y T I GLC
Sbjct: 421 MNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 41/350 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K    D  + L   +   GL P++ TY+++++  CK G+V++   +
Sbjct: 337 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDV 396

Query: 69  FGRILRSCFAPNVVTFTSLIKG-----------------------------------LCA 93
              + R+    N + +T+LI G                                   LC 
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCK 456

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA +L  K+   G  PN + Y T+++   + G    A+ L  ++ +         
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG------L 510

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +PN VTY  +IDGLCK G + +A   F +M+   L+PNV  YT+LI GFC     ++A  
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+ EMVD+G+  + V    +++   K G +  A  L   M++  ++ + + Y   + GFC
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFC 630

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
               +   + +   M   G   D  +YN LI  Y K   +EEA SL NE+
Sbjct: 631 NMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)

Query: 24  NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
           NK+ +  L L   + + G+  D+  Y  LI   CK+ ++     +  ++      PN V 
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +T+++       +  EA AL  K+   G +PNV+TY  LI+GLC+ G    A++ F +M 
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
               E+G    PN   Y+ +IDG CK G + KA  L  +M  + ++ + V YTSLI G  
Sbjct: 542 ----ELG--LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D   A  L  +M++ G+Q ++      ++  C    M  A  +L  M+   + P+  
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 655

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDD 297
            YN L+  +   G +     L   MES+   C  +D
Sbjct: 656 AYNCLIRKYQKLGNMEEASSLQNEMESVLSSCTEED 691



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V PN  + N I+  L +N +     RL + +      PN FT+N ++D  C  G++   +
Sbjct: 164 VPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEAR 219

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LFV M++MGC  D  +YN LI+GY K  E+EE   L +E+   G    VVTYN L +  
Sbjct: 220 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCF 279

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
            +    E+A   F EM+   V A+  T  TF+D  C    VR     F   R +G
Sbjct: 280 SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 4/229 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PNT T + I+  L +       + LF  +      PNV T+  +I   C   +  EA+ L
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELVEARAL 221

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
            + M   G  P+VV+ N +++   K G+++    L+  M +     +  TYN L++ F  
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSK 281

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G I +    F  M+ +G   +  + +  ++ +CK   V EA+ L+ ++  +G+ P   T
Sbjct: 282 FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFT 341

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y +L  G  +  + + A+ L  EM    +  +  TY   +DGLC   +V
Sbjct: 342 YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 191/372 (51%), Gaps = 12/372 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  V ++N L+    +  H D    L   + S+ + PD YTY+ LI   C  G+V+   
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 163

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR    PNVVT+T L++ +C  S   +A A+  +++A GC PN++TYN +ING+
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  L   + +        F+P+TV+Y+ ++ GLC     D  +ELF +M  +
Sbjct: 224 CREGRVDDARELLNRLPSYG------FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 277

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N  PN VT+  LI  FC       A  +L +M + G   N    N+++N +CK G++D+A
Sbjct: 278 NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDA 337

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +LL+ M      P+  +Y T++ G C   + +  KEL   M    C  ++ ++N  I  
Sbjct: 338 FKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICI 397

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C+   +E+A+ L  ++   G    VVTYN L +G       + AL+LF  M       +
Sbjct: 398 LCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPN 454

Query: 367 TCTYRTFIDGLC 378
           T TY T + GLC
Sbjct: 455 TITYTTLLTGLC 466



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 175/339 (51%), Gaps = 9/339 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D++ Y+ L+  +C+ G +     + G +     AP+  T+T LI+ LC   R+ +A +L 
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             +   GC+PNV+TY  L+  +CR      A+ +  EM            PN VTY++II
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG------CTPNIVTYNVII 220

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G+C+EG VD A+EL  ++      P+ V+YT+L+ G C +  W++ + L  EM+++   
Sbjct: 221 NGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 280

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+ ++++   C+ G ++ A ++L+ M +     N    N +++  C  G+++   +L
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M S GC  D  SY  ++ G C+ +  ++A  L NE+      P  VT+NT    L +
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               E+A+ L  +M  +       TY   ++G CV+  +
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHI 439



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 188/401 (46%), Gaps = 32/401 (7%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  L+  L         LSL   +   G  P++ TY++L+   C+       
Sbjct: 138 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQA 197

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN+VT+  +I G+C E R+ +A  L  +L ++G +P+ ++Y TL+ G
Sbjct: 198 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKG 257

Query: 126 LCRTGHTIVALNLFKEMTNGN---GEI------------GVVFKP--------------N 156
           LC +        LF EM   N    E+            G+V +               N
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATN 317

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T   +I+I+ +CK+G VD A +L   M     NP+ ++YT+++ G C A  W++AK LL 
Sbjct: 318 TTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLN 377

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV     PN V+ N  +  LC+ G ++ A  L++ M +        TYN L++GFC+ G
Sbjct: 378 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQG 437

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            I+   ELF    SM CK +  +Y  L+ G C  + ++ A  L  E+      P VVT+N
Sbjct: 438 HIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFN 494

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L     +    E A++L  +M  +    +  TY T +DG+
Sbjct: 495 VLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 202/439 (46%), Gaps = 67/439 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + +N  ++  +++   + + G  P++ TY+++IN  C+ G+V     +
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P+ V++T+L+KGLCA  R  +   LF ++    C PN +T++ LI   CR
Sbjct: 236 LNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 295

Query: 129 TGHTIVALNLFKEMTN------------------GNGEIGVVFK-----------PNTVT 159
            G    A+ + ++MT                     G +   FK           P+T++
Sbjct: 296 GGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTIS 355

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPN---------------------------- 191
           Y+ ++ GLC+    D AKEL  +M   N  PN                            
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS 415

Query: 192 -------VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                  VVTY +L++GFC     + A  L   M     +PN ++   ++  LC   ++D
Sbjct: 416 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLD 472

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A+ L+  M++ D  PN  T+N L+  FC  G +    EL   M   GC  +  +YN L+
Sbjct: 473 GAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLL 532

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  K+   E+AL L + L  KG+ P V+T++++   L +  + E A++LF  +Q   + 
Sbjct: 533 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMR 592

Query: 365 ADTCTYRTFIDGLCVRPQV 383
                Y   + GLC R ++
Sbjct: 593 PKAVVYNKILLGLCKRCEI 611



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 188/369 (50%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F++L+    +    +  + + +++   G   +    +I+IN  CK G+V   F +
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ +++T+++KGLC   R  +A  L  ++    C PN +T+NT I  LC+
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L ++M+     +GVV      TY+ +++G C +G +D A ELF  M  +  
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVV------TYNALVNGFCVQGHIDSALELFRSMPCK-- 452

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TYT+L+ G C+A   + A  L+ EM+     PNVV+ NV+++  C+ G ++ A  
Sbjct: 453 -PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIE 511

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M++    PN  TYNTL+DG           EL   + S G   D  +++ +I    
Sbjct: 512 LVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILS 571

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA+ L++ +   G++P  V YN +  GL +  + + A+  F  M  N    +  
Sbjct: 572 KEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNES 631

Query: 369 TYRTFIDGL 377
           TY   I+GL
Sbjct: 632 TYIILIEGL 640



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 9/301 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR GH   A  
Sbjct: 73  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ +I  LC  G V  A  L   M      PNVVTYT 
Sbjct: 133 LIGSMP---------VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C  + + +A  +L EM  +G  PN+V+ NVI+N +C+ G++D+A  LL+ +    
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+  +Y TL+ G C + + + V+ELF  M    C  ++ ++++LI  +C+   VE A+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++   G        N + + + +  + + A KL  +M       DT +Y T + GL
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 378 C 378
           C
Sbjct: 364 C 364



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 26/340 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D    L   + S G  PD  +Y+ ++   C+  +      +   ++R
Sbjct: 322 NIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVR 381

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           +   PN VTF + I  LC +  I +A  L  ++   GC   V+TYN L+NG C  GH   
Sbjct: 382 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDS 441

Query: 135 ALNLFKEMT---------------------NGNGEIGVVF-----KPNTVTYSIIIDGLC 168
           AL LF+ M                      +G  E+          PN VT+++++   C
Sbjct: 442 ALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++GF+++A EL  QM      PN++TY +L+ G        +A  LL  +V +GV P+V+
Sbjct: 502 QKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVI 561

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + I+  L K  +++ A +L  ++    +RP A  YN ++ G C   +I+   + F  M
Sbjct: 562 TFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYM 621

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            S GC  ++ +Y ILI G      ++EA  L + L  +G+
Sbjct: 622 VSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 6/218 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +      P++ T+++L++ FC+ G +   
Sbjct: 450 PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEA 509

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++T+ +L+ G+  +    +A  L   L + G  P+VIT++++I  
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L +      A+ LF  +     +IG+  +P  V Y+ I+ GLCK   +D A + F  M  
Sbjct: 570 LSKEDRIEEAVQLFHVVQ----DIGM--RPKAVVYNKILLGLCKRCEIDNAIDFFAYMVS 623

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
               PN  TY  LI G  H     EA+ LL  +  +GV
Sbjct: 624 NGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 3/163 (1%)

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G  P+V     ++  LC+ G+  +A+R+L          + F YNTL+ G+C  G ++ 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + L   + SM    D ++Y  LI   C    V +ALSL +++  +G +P VVTY  L  
Sbjct: 130 ARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +      E+A+ +  EM+      +  TY   I+G+C   +V
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 56/126 (44%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++N LL  + K+   +  L L   L S G+ PD+ T+S +I    K  ++  
Sbjct: 519 HGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEE 578

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      P  V +  ++ GLC    I  A   F  + + GC PN  TY  LI 
Sbjct: 579 AVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIE 638

Query: 125 GLCRTG 130
           GL   G
Sbjct: 639 GLAHEG 644


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 203/400 (50%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++  L K +  D    + +++ + G  PD  TY+ +I+ +  +G++     +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKM 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      PN+V   S +  LC   R  EAA +F  + A G +P++++Y TL++G   
Sbjct: 358 FRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYAS 417

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVF----------------------------KPNTVT 159
            G     + LF  M +NG      VF                             P+ VT
Sbjct: 418 EGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I    + G +  A E F QM    + PN   Y S+I GFC      +AK L+ EM+
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537

Query: 220 DQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           ++G+ +P++V  N ++N LCK+G++ +A  + DL+     RP+  T+ +L+DG+CL GK+
Sbjct: 538 NKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKM 597

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++  ++  +ME +G + D  +Y+ L++GY KN  + + L+L+ E+  KG+KP  VTY  +
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF   +   A K F EM  +        Y   + GLC
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 204/426 (47%), Gaps = 57/426 (13%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDT--------VLSLFKRLNSIGLFP-----DLYTYSI 51
             +P P  S N  L  LA+               L+LF R+      P      ++TYSI
Sbjct: 103 QATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVPLTVHTYSI 162

Query: 52  LINCFCKMGQVSLGFVIFGRILRS----------------CFA----------------- 78
           L++C C+  +  LG V+FG ILR+                C+A                 
Sbjct: 163 LMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSEL 222

Query: 79  ---PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLINGLCRTGHTI 133
              PNV +++ ++KGLC  S    A  LF  +   G  C PNV+ YNT+I+G  + G T 
Sbjct: 223 GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETG 282

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A +LF EMT          KP+ VTY++IID LCK   +DKA+ +  QM      P+ V
Sbjct: 283 KACSLFHEMTRQG------VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  +IHG+       EA  +  +M  +G+ PN+V  N  +  LCK+G+   A+ + D M
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                +P+  +Y TL+ G+   G    +  LF SM+S G   D   +NILI+ Y K   V
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++A+ ++ E+  +G+ P VVTY+T+      + +   A++ F +M    +  +T  Y + 
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 374 IDGLCV 379
           I G C+
Sbjct: 517 IQGFCM 522



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 188/366 (51%), Gaps = 5/366 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+  LL   A    +  ++ LF  + S G+  D   ++ILI+ + K G V    +I
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   +P+VVT++++I       R+ +A   F ++ A G +PN   Y+++I G C 
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM N       + +P+ V ++ +I+ LCK+G V  A ++F  +     
Sbjct: 523 HGGLVKAKELVSEMINKG-----IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+T+TSLI G+C     ++A  +L  M   GV+ ++V+ + +++   KNG++++   
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  V+PN  TY  ++ G    G+    ++ F  M   G       Y I++ G C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA+ L+ +L    +K ++   NT+ + ++++++ E A +LF  +  + +  +  
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 369 TYRTFI 374
           TY   I
Sbjct: 758 TYGVMI 763



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 213/464 (45%), Gaps = 89/464 (19%)

Query: 15  NILLGCLA-KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC--KMGQVSLG-FVIFG 70
           + LL CL   N+  + V  L  R++ +G  P++++YSI++   C   M Q +L  F +  
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +   +C +PNVV + ++I G   E    +A +LF ++   G +P+V+TYN +I+ LC+  
Sbjct: 256 KEGGAC-SPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG------------------------ 166
               A  + ++MT  NG      +P+TVTY+ +I G                        
Sbjct: 315 AMDKAELVLRQMTT-NGA-----QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIP 368

Query: 167 -----------LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW------- 208
                      LCK G   +A E+F  M  +   P++V+Y +L+HG+  +  W       
Sbjct: 369 NIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYA-SEGWFADMIGL 427

Query: 209 -----------------------------NEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
                                        ++A  +  EM  QGV P+VV+ + +++   +
Sbjct: 428 FNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR 487

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G++ +A    + MV   ++PN   Y++++ GFC+ G + + KEL   M + G    D  
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 300 -YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +N +IN  CK+  V +A  +++ +   G +P V+T+ +L  G   + + ++A K+   M
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
           +   V  D  TY T +DG     ++      F   +RKG   NT
Sbjct: 608 EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNT 651



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 174/351 (49%), Gaps = 7/351 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNIL+   AK    D  + +F  +   G+ PD+ TYS +I+ F +MG+++     F +++
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 132
                PN   + S+I+G C    +V+A  L +++   G   P+++ +N++IN LC+ G  
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A ++F  +T+  GE     +P+ +T++ +IDG C  G +DKA ++   M+   +  ++
Sbjct: 563 MDAHDIFDLVTD-IGE-----RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY++L+ G+      N+   L  EM  +GV+PN V+  +++  L + G+   A +    
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M++         Y  ++ G C     +    LF  + +M  K      N +IN   K + 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            EEA  L+  +   G+ P   TY  +   L +    E A  +F  M+ + +
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 147/318 (46%), Gaps = 9/318 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN ++  L K+        +F  +  IG  PD+ T++ LI+ +C +G++   F I
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       ++VT+++L+ G     RI +   LF +++  G +PN +TY  ++ GL R
Sbjct: 604 LDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T+ A   F EM      + V        Y II+ GLC+    D+A  LF ++   N+
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSI------YGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++    ++I+         EAK L   +   G+ PN  +  V++  L K+G +++A+ 
Sbjct: 718 KFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANN 777

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  + P +   N ++      G+I +       ++      +  + +++++ + 
Sbjct: 778 MFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFS 837

Query: 309 KNKEVEEALSLYNELPFK 326
           +  +  E + L   LP K
Sbjct: 838 RKGKYHEDMKL---LPAK 852


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 184/376 (48%), Gaps = 23/376 (6%)

Query: 16  ILLGCLAKNKHYDTVLS-------------LFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +L+GC A    +D V+              L  R+ + G  P + TY  L+   C++ Q 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                + GR+       NVV F ++I G  AE ++ EA  L+  +   GC+P+  TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ++GLC+ G    A+ L +EM          F PN VTY+I++   CK G  D  + L  +
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + L  N   Y  +I+  C     +EA GL+ EM  QG  P++ S N I+  LC N +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M+ A  + + +++  V  N  TYNT++      G+      L   M   GC  D  SYN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI   CK+  V+ +L L  E+  KGIKP  V+YN L   L + R+   AL+L  +M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 363 VAADTCTYRTFIDGLC 378
           +A D  TY T I+GLC
Sbjct: 587 LAPDIVTYNTLINGLC 602



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 175/343 (51%), Gaps = 8/343 (2%)

Query: 14  FNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN ++G CLA+ K  +    L++ +   G  PD +TYSIL++  CK+G++S    +   +
Sbjct: 314 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +  FAPNVVT+T ++   C      +  AL  ++ A G   N   YN +I  LC+ G  
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ L +EM +          P+  +Y+ II  LC    +++A+ +F  +  E +  N 
Sbjct: 433 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY ++IH       W +A  L  EM+  G   +VVS N ++  +CK+G +D +  LL+ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  ++PN  +YN L+   C   ++    EL   M + G   D  +YN LING CK   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  AL+L  +L  + + P ++TYN L     ++R  + A  L 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 36/302 (11%)

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           + FG +P+  +YN +++ L R      AL L++ M + +        P T T+ +    L
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD-----RVPPTTFTFGVAARAL 185

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+ G  ++A  L   M      P+ V Y ++IH  C      EA  LL EM+  G   +V
Sbjct: 186 CRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADV 245

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC-------------- 273
            + + ++  +C  G++  A+RL+D M+     P   TY  L+ G C              
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 305

Query: 274 -----------------LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
                              GK+    EL+ +M   GC+ D  +Y+IL++G CK   +  A
Sbjct: 306 VPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSA 365

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + L  E+  KG  P VVTY  + H   +    +    L  EM    +  ++  Y   I  
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425

Query: 377 LC 378
           LC
Sbjct: 426 LC 427



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 66/125 (52%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +H     V S+N L+  + K+ + D  L L + +   G+ P+  +Y+ILI+  CK  +V 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +  ++L    AP++VT+ +LI GLC    +  A  L  KL      P++ITYN LI
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 124 NGLCR 128
           +  C+
Sbjct: 634 SWHCK 638



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NIL+  L K +     L L K++ + GL PD+ TY+ LIN  CKMG +     +  ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
                 P+++T+  LI   C    + +AA L  +  A  C
Sbjct: 618 HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 65/178 (36%), Gaps = 41/178 (23%)

Query: 213 GLLIEMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFTYN 266
           G  + ++DQ     GVQP+  S NV+++ L +     +A  L   MV  D V P  FT+ 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
                 C  G+ N                                   EAL+L   +   
Sbjct: 180 VAARALCRLGRAN-----------------------------------EALALLRGMARH 204

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G  P  V Y T+ H L +      A  L  EM     AAD  T+   + G+C   +VR
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 211/396 (53%), Gaps = 12/396 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L  L K      V  LF  +   G+ P + TY+ LIN     G V+  + +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + +++     PNVVT+T++I  LC E  I +A  LF ++K  G  PN+ TYN L++   +
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL  + ++     + G+V  PN V ++ +IDGLC+   + +AK +FL M    +
Sbjct: 256 RDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEV 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V  Y SLIHG   +    EA     E++ +G++P+  + ++++  LC  G+M  A+R
Sbjct: 310 APTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATR 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L++M Q  +  NA  YN L+D +C +G ++        M  +G + +  +Y+ LI+G+ 
Sbjct: 370 FLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHS 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN E+E A+++Y E+  KG++P VVTY  L HG  +    + A  L  EM+   + ++  
Sbjct: 430 KNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAI 489

Query: 369 TYRTFIDGLC----VRPQVRF--TYARRKGNSGNTN 398
           T    +DGLC    V+  VRF   Y+ +K +  N +
Sbjct: 490 TVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPS 525



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 182/379 (48%), Gaps = 16/379 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L +         LF  +   G+ P+LYTY+ L++   K   +    V 
Sbjct: 206 PNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L+    PN V FT+LI GLC  +RI EA  +F  +  +   P V  YN+LI+G  R
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   AL  F+E+           +P+  T SI++ GLC  G +  A      M+   +
Sbjct: 326 SGYAQEALAFFQEIIRKG------LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGI 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   Y  LI  +C + + +EA      M + GV+PNVV+ + +++   KNG+M+ A  
Sbjct: 380 ALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMA 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V PN  TY  L+ G    G ++    L   ME  G   +  + ++L++G C
Sbjct: 440 IYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLC 499

Query: 309 KNKEVEEALSLYNELPFKGIK-----PTV---VTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +   V++A+    E  + G K     P++   VTY TL +GL+   Q   A   F  M+ 
Sbjct: 500 RENRVQDAVRFIME--YSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRD 557

Query: 361 NDVAADTCTYRTFIDGLCV 379
           + +  D  TY   I GLC+
Sbjct: 558 SGMVPDRFTYTLVIRGLCM 576


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 197/371 (53%), Gaps = 9/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++S N LL  L K      +  ++K +    + P+L T++I IN  CK G+++    +  
Sbjct: 165 LNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIE 224

Query: 71  RILRSCFAPNVVTFTSLIKGLC---AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            I    F+PN+VT+ +LI G C   +  ++  A A+  ++ A    PN IT+NTLI+G C
Sbjct: 225 DIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFC 284

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +  + + A N F+EM           KPN VTY+ +I+GL   G +D+A  L+ +M    
Sbjct: 285 KDENVLAAKNAFEEMQRQG------LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN+VT+ +LI+GFC      EA+ L  ++ +Q + PN ++ N +++  CK G M+   
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L + M+   + PN  TYN L+ G C    +   K+L   ME+   K D  +YNILI G+
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGW 458

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+ E  +A  L  E+   G+KP  VTYNTL  G       + ALK+  +M+     A+ 
Sbjct: 459 CKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANV 518

Query: 368 CTYRTFIDGLC 378
            TY   I G C
Sbjct: 519 VTYNVLIKGFC 529



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 201/365 (55%), Gaps = 9/365 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P +++FNI +  L K    +    + + + + G  P++ TY+ LI+  CK G     +  
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             I   +L +   PN +TF +LI G C +  ++ A   F +++  G +PN++TYN+LING
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L   G    A+ L+ +M      +G+  KPN VT++ +I+G CK+  + +A++LF  +  
Sbjct: 318 LSNNGKLDEAIALWDKM------VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           ++L PN +T+ ++I  FC A    E   L   M+D+G+ PNV + N ++  LC+N  +  
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +LL+ M   +++ +  TYN L+ G+C  G+ ++ ++L   M ++G K +  +YN L++
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMD 491

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYC    ++ AL +  ++  +G +  VVTYN L  G  +  + E A +L  EM    +  
Sbjct: 492 GYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551

Query: 366 DTCTY 370
           +  TY
Sbjct: 552 NRTTY 556



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 194/379 (51%), Gaps = 9/379 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L+     N    +   +F+R+   G    L + + L++   K  +      ++  +++
Sbjct: 134 DMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIK 193

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT-- 132
               PN+ TF   I GLC   ++ +A  +   +KA+G  PN++TYNTLI+G C+ G    
Sbjct: 194 RRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGK 253

Query: 133 -IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + KEM      +     PN +T++ +IDG CK+  V  AK  F +M+ + L PN
Sbjct: 254 MYRADAILKEM------LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           +VTY SLI+G  +    +EA  L  +MV  G++PN+V+ N ++N  CK   +  A +L D
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFD 367

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            + + D+ PNA T+NT++D FC  G +     L  SM   G   +  +YN LI G C+N+
Sbjct: 368 DIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQ 427

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V  A  L NE+    +K  VVTYN L  G  +  +  +A KL  EM    V  +  TY 
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487

Query: 372 TFIDGLCVRPQVRFTYARR 390
           T +DG C+   ++     R
Sbjct: 488 TLMDGYCMEGNLKAALKVR 506



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+    K K       LF  +    L P+  T++ +I+ FCK G +  GF +
Sbjct: 341 PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFAL 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PNV T+  LI GLC    +  A  L  +++ +  + +V+TYN LI G C+
Sbjct: 401 HNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCK 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM N    +GV  KPN VTY+ ++DG C EG +  A ++  QM+ E  
Sbjct: 461 DGEPSKAEKLLGEMLN----VGV--KPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             NVVTY  LI GFC      +A  LL EM+++G+ PN  + +V+  E+ + G
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 14/169 (8%)

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRP--NAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           +++L KN K   +S    L++  D RP  NA   + L+  +    +I+   E+F  ++  
Sbjct: 101 LDKLVKNEKHTVSSVFHSLLLGGD-RPCANALITDMLVLAYVTNLEIHSACEVFRRVQDY 159

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G K    S N L++   K  E  E   +Y E+  + I+P + T+N   +GL +  +  +A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTNRG 400
             +  +++    + +  TY T IDG C           +KG++G   R 
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHC-----------KKGSAGKMYRA 257


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 201/417 (48%), Gaps = 43/417 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SFNIL+   A+ +  D  ++ F+ +      PDL+T+ IL++C CK G     F +
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211

Query: 69  FGRILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  ++   F P +    T++++ L    R+ EA  +F +++  G  P+ I YNT+I+GL 
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL +   M      +     P  VTY I+++ LCK G +++A+ELF  M    
Sbjct: 272 KAGHAQEALKVLDNM------LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN V YTSLIHGF  +    EA  L  EMV+ G +P+V++  V+++ LCK+G  + A+
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +  + M++   +PN  TY T++ G    G++     +   M + GC  D  +Y  L++G+
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGF 445

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG-------------LFEIRQA------ 348
           CK   ++EA  L +EL      P +  Y++L  G             LFE  +A      
Sbjct: 446 CKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLD 505

Query: 349 -----------------ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                            + A ++F  M       D  TY   I+GLC   + R   A
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERA 562



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 188/381 (49%), Gaps = 13/381 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N ++  LAK  H    L +   + +    P   TY IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +  S F PN V +TSLI G     R+ EA +LF ++   G  P+VIT+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++G+   A   F+EM  G        KPN VTY+ II GL K G V  A  +   M    
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VTY  L+ GFC     +EA  LL E+      PN+   + ++  LC  G ++N  
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT- 489

Query: 248 RLLDLMVQCDVRPNAFTYN---TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            L DL  Q              +++ G C TG+++    +F  M S GCK D  +YNILI
Sbjct: 490 -LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 305 NGYCKNKE--VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           NG C+++E  VE A +L ++L   G  P  VTY  L  GL +I + +RA+K+  E     
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
             AD   Y     GLC + QV
Sbjct: 609 WNADVVAYTALCTGLCYQGQV 629



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 192/408 (47%), Gaps = 45/408 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L+K         + K + + G FPD  TY  L++ FCK+G++     +
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLC-------------------AES-------------- 95
              + +   +PN+  ++SL+KGLC                   AE+              
Sbjct: 458 LDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC 517

Query: 96  ---RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV--ALNLFKEMTNGNGEIG 150
              R+ EA  +F ++ + GC+P+  TYN LINGLCR+    V  A  L  ++        
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM------ 571

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V + P+ VTY+ +  GLCK G VD+A ++  +      N +VV YT+L  G C+    + 
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  EMV QG  P+  +   I+N L K  K+++A +  D M+    +P   TY  L+ 
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691

Query: 271 GFCLTGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
             C  G ++     F  M + G        Y+ LI+G+CK  +V+ AL L+ ++  +G  
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           PT VT  +LF GL    + E+A +L  EM          T+   +DGL
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 172/351 (49%), Gaps = 6/351 (1%)

Query: 29  TVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           T +S F+      G   D++TY+ L+N        S  + I   +L++  APN  +F  L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I+      R  +A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM     
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM---- 216

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            +G V  P+   ++ ++  L K   V +A+E+F QM+     P+ + Y ++I G   A  
Sbjct: 217 AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             EA  +L  M+ +   P  V+  +++N LCK G ++ A  L  +M     RPN+  Y +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ GF  +G++     LF  M   G + D  ++ ++I+G CK+   E+A   + E+   G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KP VVTY T+  GL +I +   A ++   M  +    D+ TY   +DG C
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 10/311 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGFVIFGRI 72
           +I++G L K    D    +F+R+ S G  PD  TY+ILIN  C+    +V   F +   +
Sbjct: 511 SIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               + P+ VT+T L  GLC    +  A  +  +  + G   +V+ Y  L  GLC  G  
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++LF+EM    G       P+   Y  II+GL K   ++ A + F +M  +   P V
Sbjct: 630 DRAVSLFQEMVRQGG------APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV 683

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            TYT+L+   CHA + +EA      M+ +G +  +V+  + +++  CK  K+D A +L +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M+     P A T  +L DG   +GK  + +EL   M + G      ++  +++G  K+ 
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 312 EVEEALSLYNE 322
           E  + L L  E
Sbjct: 804 ESGKLLKLVQE 814


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD YTY+ LI   C  G+ +    +   +LR    P+VVT+T L++  C  S   +A  L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +++  GC P+++TYN ++NG+C+ G    A+   K + +   E      PNTV+Y+I+
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE------PNTVSYNIV 143

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GLC     + A+EL  +M  +   PNVVT+  LI   C       A  +L ++   G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PN +S N +++  CK  KMD A   LDLMV     P+  +YNTL+   C +G+++   E
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   ++  GC     SYN +I+G  K  + +EAL L NE+  KG++P ++TY+T+  GL 
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
              + E A++ F ++Q   +  +T  Y   I GLC R
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 360



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L         L++   +      PD+ TY+IL+   CK       
Sbjct: 27  PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 86

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      P++VT+  ++ G+C E R+ +A      L ++GCEPN ++YN ++ G
Sbjct: 87  MKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 146

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM    G+ G    PN VT++++I  LC++G V+ A E+  Q+  
Sbjct: 147 LCTAERWEDAEELMGEM----GQKGC--PPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN ++Y  L+H FC     ++A   L  MV +G  P++VS N ++  LC++G++D 
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  +      P   +YNT++DG    GK     EL   M S G + D  +Y+ +  
Sbjct: 261 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +E+A+  + ++   GI+P  V YN +  GL + R+   A+ LF  M GN    
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380

Query: 366 DTCTYRTFIDGL 377
           +  TY   I+GL
Sbjct: 381 NESTYTILIEGL 392



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 9/337 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y+ ++  +C  GQ+     +   +      P+  T+ +LI+GLC   R   A A+  ++
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
               C P+V+TY  L+   C+      A+ L  EM +          P+ VTY+++++G+
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGI 112

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+EG VD A E    +      PN V+Y  ++ G C A  W +A+ L+ EM  +G  PNV
Sbjct: 113 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 172

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N++++ LC+ G ++ A  +L+ + +    PN+ +YN L+  FC   K+++       
Sbjct: 173 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 232

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S GC  D  SYN L+   C++ EV+ A+ L ++L  KG  P +++YNT+  GL +  +
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + AL+L  EM    +  D  TY T   GLC   ++ 
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 164/344 (47%), Gaps = 29/344 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL    K   Y   + L   +   G  PD+ TY++++N  C+ G+V      
Sbjct: 65  PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  ++KGLC   R  +A  L  ++   GC PNV+T+N LI+ LCR
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184

Query: 129 TGHTIVALNLF-------------------------KEMTNGNGEIGVVFK----PNTVT 159
            G    AL +                          K+M      + ++      P+ V+
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++  LC+ G VD A EL  Q+K +   P +++Y ++I G   A    EA  LL EMV
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+QP++++ + I   LC+  ++++A R    +    +RPN   YN ++ G C   + +
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
              +LF  M   GC  ++ +Y ILI G      ++EA  L +EL
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 9/267 (3%)

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN ++ G C  G    A  L  EM           +P+  TY+ +I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANA 51

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             +  +M      P+VVTYT L+   C  + + +A  LL EM D+G  P++V+ NV++N 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +C+ G++D+A   L  +      PN  +YN ++ G C   +    +EL   M   GC  +
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             ++N+LI+  C+   VE AL +  ++P  G  P  ++YN L H   + ++ ++A+    
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M       D  +Y T +  LC   +V
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEV 258



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 6/225 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N LL    K K  D  ++    + S G +PD+ +Y+ L+   C+ G+V +   +
Sbjct: 205 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     AP ++++ ++I GL    +  EA  L  ++ + G +P++ITY+T+  GLCR
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 324

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+  F ++ +    +G+  +PNTV Y+ II GLCK      A +LF  M     
Sbjct: 325 EDRIEDAIRAFGKVQD----MGI--RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 378

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            PN  TYT LI G  +     EA+ LL E+  +  +  ++  ++I
Sbjct: 379 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 212/422 (50%), Gaps = 58/422 (13%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTV-------LSLFKRLNSIG---LFPDLYTYSILINCFC 57
           P  + + N LL  +A+     +V       +S+F R+   G   + PD+ T+ ILI+C C
Sbjct: 96  PGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCC 155

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNV 116
             G ++LGF   G+I+++      VTFT L++ LCAE R  +A  +   ++   GC P+V
Sbjct: 156 DAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDV 215

Query: 117 ITYNTLINGLCR-------------------------TGHTIVALNLFKEMTNGNGEIGV 151
            +Y TL+ GLC                            +T V    FKE     G++G 
Sbjct: 216 FSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE-----GDVGK 270

Query: 152 VFK-----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            +            PN VT + +IDGLCK   +DKA+ +  QM  E++ PN  TY SLIH
Sbjct: 271 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 330

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+  +  W EA  +L EM   G +PNVV+ +++++ LCK+G    A  + + M+Q   +P
Sbjct: 331 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKP 390

Query: 261 NAFTYNTLMDGFCLTGKI---NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           NA TY +L+ G+   G +   N VK+L V     G +     +NI I  YCK   ++EA 
Sbjct: 391 NASTYGSLLHGYATEGNLVDMNNVKDLMV---QNGMRPGRHVFNIEIYAYCKCGRLDEAS 447

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +N++  +G  P +V Y T+  GL +I + + A+  F +M  + ++ D  T+ T I G 
Sbjct: 448 LTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGF 507

Query: 378 CV 379
            +
Sbjct: 508 AL 509



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 197/406 (48%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGF 66
           P V S+  LL  L   K  +    L   +   G    P++ +Y+ +I+ F K G V   +
Sbjct: 213 PDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAY 272

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F ++L     PNVVT  S+I GLC    + +A A+  ++      PN  TYN+LI+G 
Sbjct: 273 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 332

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             +G    A+ + KEM+  +G+     +PN VTYS++ID LCK G   +A+E+F  M   
Sbjct: 333 LSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS 386

Query: 187 NLNPNVVTYTSLIHGFCHAN---DWNEAKGLLIE-------------------------- 217
              PN  TY SL+HG+       D N  K L+++                          
Sbjct: 387 GQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA 446

Query: 218 ------MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                 M  QG  P++V+   +++ LCK G++D+A      M+   + P+  T+NTL+ G
Sbjct: 447 SLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHG 506

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           F L GK  + +ELF  M   G   +  ++N +I+   K  +V EA  L++ +P  G KP 
Sbjct: 507 FALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPN 566

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           VV+YNT+ HG F   +    +KL  +M    +     T+ T +DG+
Sbjct: 567 VVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 22/372 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N L+     +  +   + + K ++  G  P++ TYS+LI+C CK G  +    I
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++S   PN  T+ SL+ G   E  +V+   +   +   G  P    +N  I   C+
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCK 439

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F +M          F P+ V Y+ +IDGLCK G +D A   F QM  + L
Sbjct: 440 CGRLDEASLTFNKMQQQG------FMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 493

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+++T+ +LIHGF     W +A+ L  EM+D+G+ PNV + N ++++L K GK+  A +
Sbjct: 494 SPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARK 553

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L DLM +   +PN  +YNT++ G+ + G++  V +L   M  +G K    ++N L++G  
Sbjct: 554 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                             G+KP VVT  TL     E  + E  L LF EM G     DT 
Sbjct: 614 S----------------MGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 657

Query: 369 TYRTFIDGLCVR 380
           T    + G+ V+
Sbjct: 658 TENIKLRGVTVK 669


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 188/342 (54%), Gaps = 15/342 (4%)

Query: 9   PPVSSFNIL------LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V ++N L      +G + K    D +L   K + + G+ P+  TY+ILI+ FCK   V
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAIL---KEMVAKGICPNEVTYNILIDGFCKDENV 244

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           S    +FG + R    PNVVT+  LI GLC++ ++ EA AL  ++ +   EPNV+T+N L
Sbjct: 245 SGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVL 304

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING C+      A+NLF +M       GV   PN +TY+ +ID  CK+G ++ A  L+  
Sbjct: 305 INGFCKNKTVNEAINLFNDMEKQ----GV--DPNAMTYTTLIDAYCKDGRMEDAFALYNM 358

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M    + P V TY  LI G C   D   A+ L+ EMV + +  +VV+ N++++ LCK G+
Sbjct: 359 MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGE 418

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A +LLD M +  + P+  TYNTLMDG+C  G +     +   ME  G + +  ++N+
Sbjct: 419 SRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNV 478

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           LI G+C    +E+A  L NE+  +G+ P   TY  +   + E
Sbjct: 479 LIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 199/374 (53%), Gaps = 9/374 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N LL  L K      +  +++ +    +  ++ +++I++N  CK+G+++    +   +
Sbjct: 122 SCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM 181

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRI---VEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                +PNV+T+ +LI G C   RI    +A A+  ++ A G  PN +TYN LI+G C+ 
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD 241

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
            +   A+ +F EM           +PN VTY+I+I+GLC +G VD+A  L  QM   +L 
Sbjct: 242 ENVSGAMRVFGEMQRQG------LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNVVT+  LI+GFC     NEA  L  +M  QGV PN ++   +++  CK+G+M++A  L
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            ++M+   + P   TYN L+ G C  G +   + L   M S     D  +YNILI+  CK
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             E  +A+ L +E+  KG+ P+ VTYNTL  G         AL +   M+     A+  T
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 370 YRTFIDGLCVRPQV 383
           +   I G C++ ++
Sbjct: 476 HNVLIKGFCLKGRL 489



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 190/372 (51%), Gaps = 14/372 (3%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           FKR    G    L + + L++   K  +      ++  +++     NV++F  ++ GLC 
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC---RTGHTIVALNLFKEMTNGNGEIG 150
             ++  A  +   +K +G  PNVITYNTLI+G C   R G    A  + KEM      + 
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEM------VA 221

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               PN VTY+I+IDG CK+  V  A  +F +M+ + L PNVVTY  LI+G C     +E
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  +MV   ++PNVV+ NV++N  CKN  ++ A  L + M +  V PNA TY TL+D
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            +C  G++     L+  M   G   +  +YN LI G C+  +V+ A SL NE+  K +  
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF----- 385
            VVTYN L   L +  ++ +A+KL  EM    +     TY T +DG C    +R      
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 386 TYARRKGNSGNT 397
           T   RKG   N 
Sbjct: 462 TRMERKGKQANV 473



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 181/338 (53%), Gaps = 9/338 (2%)

Query: 50  SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
            +L+  F +  ++  GF  F R     F  ++++   L+ GL  ES   +   ++ ++  
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
              E NVI++N ++NGLC+ G    A ++ ++M       GV   PN +TY+ +IDG CK
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMK----VWGV--SPNVITYNTLIDGYCK 202

Query: 170 EGFVD---KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            G +    KA  +  +M  + + PN VTY  LI GFC   + + A  +  EM  QG++PN
Sbjct: 203 MGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN 262

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV+ N+++N LC +GK+D A  L D MV  D+ PN  T+N L++GFC    +N    LF 
Sbjct: 263 VVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFN 322

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            ME  G   +  +Y  LI+ YCK+  +E+A +LYN +  +GI P V TYN L  GL    
Sbjct: 323 DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG 382

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             + A  L  EM    ++AD  TY   ID LC + + R
Sbjct: 383 DVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESR 420



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 187/363 (51%), Gaps = 9/363 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF---V 67
           V SFNI++  L K    +    + + +   G+ P++ TY+ LI+ +CKMG++   +    
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   ++     PN VT+  LI G C +  +  A  +F +++  G  PNV+TYN LINGLC
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A+ L  +M + +       +PN VT++++I+G CK   V++A  LF  M+ + 
Sbjct: 275 SDGKVDEAVALRDQMVSSD------LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           ++PN +TYT+LI  +C      +A  L   M+D+G+ P V + N ++  LC+ G +  A 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L++ MV   +  +  TYN L+D  C  G+  +  +L   M   G      +YN L++GY
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+   +  AL +   +  KG +  VVT+N L  G     + E A  L  EM    +  + 
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNR 508

Query: 368 CTY 370
            TY
Sbjct: 509 TTY 511



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 128/233 (54%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N+L+    KNK  +  ++LF  +   G+ P+  TY+ LI+ +CK G++   F +
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     P V T+  LI GLC +  +  A +L  ++ +     +V+TYN LI+ LC+
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G +  A+ L  EM     E G+   P+ VTY+ ++DG C+EG +  A  +  +M+ +  
Sbjct: 416 KGESRKAVKLLDEMF----EKGL--NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             NVVT+  LI GFC      +A GLL EM+++G+ PN  +  +I  E+ + G
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 6/165 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS++N L+  L +        SL   + S  L  D+ TY+ILI+  CK G+      +
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ VT+ +L+ G C E  +  A  + T+++  G + NV+T+N LI G C 
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
            G    A  L  EM     E G+V  PN  TY II + + ++GFV
Sbjct: 486 KGRLEDANGLLNEML----ERGLV--PNRTTYEIIKEEMMEKGFV 524


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 38/401 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + K+  +   +++   + + G  P++ TY+++IN  C+ G+V     I
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P++V++T+++KGLCA  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+           PNT   +I+I+ +CK+G VD A +    M     
Sbjct: 305 GGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+ ++YT+++ G C A  W  AK LL EMV +   PN V+ N  +  LC+ G ++ A +
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 249 LLDLMVQ--CDV------------------------------RPNAFTYNTLMDGFCLTG 276
           L++LM +  C V                               PN  TY TL+ G C   
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAE 478

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +++   EL   M    C  +  ++N+L++ +C+   VEEA+ L N++   G  P ++T+N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           TL  G+ +   +E AL+L   +    V+ DT TY + +D L
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 579



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 157/305 (51%), Gaps = 10/305 (3%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R C  P+VVT+T L++ +C  S   EA  +  +++A GC PN++TYN +ING+CR G   
Sbjct: 181 RGC-QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A    KE+ N     G  F+P+ V+Y+ ++ GLC     D  K LF +M  +   PN V
Sbjct: 240 DA----KEILNRLSSYG--FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 293

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+  L+  FC       A  +L +M   G  PN    N+++N +CK G++D+A   L+ M
Sbjct: 294 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+  +Y T++ G C  G+    KEL   M    C  ++ ++N  I   C+   +
Sbjct: 354 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 413

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A+ L   +P  G    +VTYN L HG     + + AL+LF  +       +T TY T 
Sbjct: 414 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTL 470

Query: 374 IDGLC 378
           + GLC
Sbjct: 471 LTGLC 475



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 181/398 (45%), Gaps = 32/398 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+  +L  L   + +D V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 255 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 314

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    PN      +I  +C + R+ +A      +  +GC P+ I+Y T++ GLCR
Sbjct: 315 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 374

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----PN------TVT 159
            G    A  L  EM   N                  G I    K     P        VT
Sbjct: 375 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++ G C +G VD A ELF  +  E   PN +TYT+L+ G CHA   + A  LL EM+
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMI 491

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +    N V+ NV+++  C+ G ++ A  L++ M++    PN  T+NTL+DG        
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              EL   + S G   D  +Y+ +++   +    EEA+ + + +   G++P V  YN + 
Sbjct: 552 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 611

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             L +  + ++A+  F  M  N    +  TY   I+GL
Sbjct: 612 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 9/338 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P  +  NI++  + K    D        +   G  PD  +Y+ ++   C+ G+   
Sbjct: 321 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 380

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   ++R    PN VTF + I  LC +  I +A  L   +  +GC   ++TYN L++
Sbjct: 381 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 440

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL LF  +           +PNT+TY+ ++ GLC    +D A EL  +M 
Sbjct: 441 GFCVQGRVDSALELFNNLP---------CEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++   N VT+  L+  FC      EA  L+ +M++ G  PN+++ N +++ + K+   +
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL  +V   V  +  TY++++D      +     ++  +++ MG +     YN ++
Sbjct: 552 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 611

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
              CK  E ++A+  +  +   G  P   TY  L  GL
Sbjct: 612 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 101/196 (51%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M      P+VVTYT L+   C ++ + EA  +L EM  +G  PN+V+ NVI+N +C+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A  +L+ +     +P+  +Y T++ G C   + + VK LF  M    C  ++ ++++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+  +C+   VE A+ +  ++   G  P     N + + + +  + + A      M    
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 363 VAADTCTYRTFIDGLC 378
              DT +Y T + GLC
Sbjct: 358 CNPDTISYTTVLRGLC 373



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+ +G QP+VV+  V++  +CK+     A  +LD M      PN  TYN +++G C  G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++  KE+   + S G + D  SY  ++ G C  +  ++   L+ E+  K   P  VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           L          ERA+++  +M  +    +T      I+ +C + +V   Y
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
           C  RP   T      G   T + +  +    +M   GC+    +Y +L+   CK+    E
Sbjct: 147 CPSRPTP-TPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGE 205

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A+++ +E+  KG  P +VTYN + +G+    + + A ++   +       D  +Y T + 
Sbjct: 206 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 265

Query: 376 GLCV 379
           GLC 
Sbjct: 266 GLCA 269


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 187/342 (54%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   GL  D  TY+ LIN  C+ G++     +   +       + VT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA  +  K+      PNV+TY  L +GLC+ G    A  L  EM +   E+    
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N  TY+ +I+GLCK G +++A    + M    L P+V TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+D+G++P +V+ NV+MN  C +G+++   RLL+ M++ ++ PN  TYN+LM  +C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M S     ++ +YNILI G+CK + ++EAL  ++E+  KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +YN L   L + ++   A +LF +M+ + + A+   Y  +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NILL  L           LF  + S    PD+ TY I+++ +C + ++     +   +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  N V +TS+I  LC E ++ +A  +   +   G   +   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N F EM             + VTY+ +I+GLC+ G + +A+ +  +M+ + L+ + 
Sbjct: 372 AAARNWFDEMQKRG------LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT LI G+C      EA  +  +MV + V PNVV+   + + LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  N FTYN+L++G C  G + +     + M+  G K D ++Y  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A SL  E+  KGIKPT+VTYN L +G     + E   +L   M   ++  +T TY +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 373 FIDGLCVRPQVRFTYARRKG 392
            +   C+   ++ T    KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKG 625



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V ++ I++         +T + L   + + GL  +   Y+ +I   C  GQVS   
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++      +   FT+++ G C +  +  A   F +++  G   + +TY  LINGL
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  + +EM +   ++      + VTY+++IDG CK G + +A  +  +M  +
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDV------DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTYT+L  G C   D   A  LL EM  +G++ N+ + N ++N LCK G ++ A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R +  M +  ++P+ +TY T++   C + +++R   L   M   G K    +YN+L+NG
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C +  VE    L   +  K I P   TYN+L       +  +   +++  M   +V  +
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPN 634

Query: 367 TCTYRTFIDGLC 378
             TY   I G C
Sbjct: 635 ENTYNILIKGHC 646



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 189/408 (46%), Gaps = 52/408 (12%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S  PVS F++LL CL           L  RL   G+ P   +      C   + ++ L  
Sbjct: 195 SSDPVS-FDLLLLCLPSA-------PLLLRLRQYGISPSPES------CNAVLCRLPLDE 240

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  ++ +     N  ++  L+K LC   RI +A  LF ++ +    P+V+TY  +++G 
Sbjct: 241 AV--QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGY 295

Query: 127 CRTGHTIVALNLFKEMTNGNGEI-------------------------------GVVFKP 155
           C       A+ L  EM     E+                               GVV   
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-- 353

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +   ++ ++ G C++G +  A+  F +M+   L  + VTYT+LI+G C A +  EA+ +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM D+G+  + V+  V+++  CK GKM  A  + + MVQ  V PN  TY  L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G +    EL   M S G + + F+YN LING CK   +E+A+    ++   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            T+   L + ++ +RA  L  EM    +     TY   ++G C+  +V
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++G L ++K  D   SL + +   G+ P + TY++L+N FC  G+V  G  +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ SL+K  C E  +     ++  + +    PN  TYN LI G C+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL    EM          F+    +Y+ +I  L K+    +A+ LF +M+ + L
Sbjct: 648 ARNMKEALYFHSEMIEKG------FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRL 701

Query: 189 --NPNVVTY 195
              P+V  +
Sbjct: 702 TAEPDVYNF 710


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 189/369 (51%), Gaps = 8/369 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +S+FN LL  L K         L  ++   G+ P+L+TY+  I   C+ G++     + G
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R++     P+VVT+  LI GLC  S+  EA     KL   G EP+  TYNTLI G C+ G
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335

Query: 131 HTIVALN-LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
              +A   L   + NG       F P+  TY  +IDGLC EG  ++A  LF +   + + 
Sbjct: 336 MVQLAERILVNAVFNG-------FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV+ Y +LI G  +     EA  L  EM ++G+ P V + N+++N LCK G + +A  L
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           + +M+     P+ FT+N L+ G+    K+    E+   M   G   D ++YN L+NG CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             + E+ +  Y  +  KG  P + T+N L   L    + ++AL L  EM+   V  D  T
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVT 568

Query: 370 YRTFIDGLC 378
           + T IDG C
Sbjct: 569 FGTLIDGFC 577



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 190/380 (50%), Gaps = 7/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L KN  +        +L + GL PD +TY+ LI  +CK G V L   I
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               + + F P+  T+ SLI GLC E     A ALF +    G +PNVI YNTLI GL  
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM+    E G++  P   T++I+++GLCK G V  A  L   M  +  
Sbjct: 404 QGLILEAAQLASEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+  LIHG+        A  +L  M+D GV P+V + N ++N LCK  K ++   
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+    PN FT+N L++  C   K+++   L   M++     D  ++  LI+G+C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 309 KNKEVEEALSLYNELP-FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           KN +++ A +L+ ++     +  +  TYN + H   E      A KLF EM    +  D 
Sbjct: 578 KNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            TYR  +DG C    V   Y
Sbjct: 638 YTYRLMVDGFCKTGNVDLGY 657



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 174/349 (49%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            +++F+R++     P +++Y+ +++     G       ++ R+      P+V +FT  +K
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C  SR   A  L   + + GCE NV+ Y T++ G            LF +M      +
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            +       T++ ++  LCK+G V + ++L  ++    + PN+ TY   I G C   + +
Sbjct: 215 CL------STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  ++  ++DQG +P+VV+ N ++  LCKN K   A   L  +V   + P++FTYNTL+
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G+C  G +   + + V+    G   D+F+Y  LI+G C   E   AL+L+NE   KGIK
Sbjct: 329 AGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+ YNTL  GL        A +L  EM    +  +  T+   ++GLC
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 6/322 (1%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           + + G+V     +F R+      P V ++ +++  L       +A  ++ +++  G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V ++   +   CRT     AL L   M++   E+      N V Y  ++ G  +E F D+
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEM------NVVAYCTVVGGFYEENFKDE 199

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
             ELF +M    ++  + T+  L+H  C   D  E + LL +++ +GV PN+ + N  + 
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQ 259

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LC+ G++D A R++  ++    +P+  TYN L+ G C   K    +     + + G + 
Sbjct: 260 GLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEP 319

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D F+YN LI GYCK   V+ A  +     F G  P   TY +L  GL    +  RAL LF
Sbjct: 320 DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALF 379

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            E  G  +  +   Y T I GL
Sbjct: 380 NEALGKGIKPNVILYNTLIKGL 401



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +   +K    + ++ EA  +F ++  + CEP V +YN +++ L  +G+   A  ++  M 
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
           +          P+  +++I +   C+      A  L   M  +    NVV Y +++ GF 
Sbjct: 139 DRG------ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             N  +E   L  +M+  GV   + + N +++ LCK G +    +LLD +++  V PN F
Sbjct: 193 EENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLF 252

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN  + G C  G+++    +   +   G K D  +YN LI G CKN + +EA     +L
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +G++P   TYNTL  G  +    + A ++ V    N    D  TYR+ IDGLC
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLC 367



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 160/339 (47%), Gaps = 12/339 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+  L K         L K + S G FPD++T++ILI+ +    ++     I
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   P+V T+ SL+ GLC  S+  +    +  +   GC PN+ T+N L+  LCR
Sbjct: 484 LDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L +EM N +        P+ VT+  +IDG CK G +D A  LF +M+   +
Sbjct: 544 YHKLDKALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597

Query: 189 -NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + +  TY  +IH F    +   A+ L  EMVD+ + P+  +  ++++  CK G +D   
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           + L  M++    P+  T   +++  C+  ++     +   M   G   +  + N + +  
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--AVNTIFD-- 713

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
             +K+   A  L  E   K    T   Y  LF GL + R
Sbjct: 714 -HDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKR 751



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 8/251 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
           AL +F  M   +G     FK    TY  II+ L   G  +  +E+ + M+ +N+  +++ 
Sbjct: 23  ALEMFNSMRKEDG-----FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-QNVGNHMLE 76

Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y   +  +       EA  +   M     +P V S N IM+ L  +G  D A ++   
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+ +++   M  FC T + +    L  +M S GC+ +  +Y  ++ G+ +   
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            +E   L+ ++   G+   + T+N L H L +    +   KL  ++    V  +  TY  
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 373 FIDGLCVRPQV 383
           FI GLC + ++
Sbjct: 257 FIQGLCQKGEL 267



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 4/213 (1%)

Query: 175 KAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           KA E+F  M+ E+     + TY S+I        +   + +L++M  Q V  +++    +
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM-RQNVGNHMLEGVYV 80

Query: 234 --MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
             M    + GK+  A  + + M   D  P  F+YN +M     +G  ++  ++++ M   
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR 140

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G   D +S+ I +  +C+      AL L N +  +G +  VV Y T+  G +E    +  
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +LF +M  + V+    T+   +  LC +  V+
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVK 233


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 198/370 (53%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+  L K    +  + L   +   GL  D+  YS LI+ FC  G +  G  +
Sbjct: 43  PNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKAL 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    +PNVV ++ LI G C +    EA A+   +   G +P+V TY  +I GLC+
Sbjct: 103 FDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+LF  MT    E      P+TVTY+++I+GLCKEG +  A ++F  M  +  
Sbjct: 163 DGRARKALDLFDLMTEKGEE------PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNA 246
              VV+Y +LI G C+    +EA  L   +++ G  V+P+V++ N ++  LCK G++D A
Sbjct: 217 RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKA 276

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + D M++     N FT + L+  +  +G I++  EL+  +  +G      +Y+++I+G
Sbjct: 277 VEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDG 336

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK   +  A  L++ +   G+ PT+  YNTL   L +    E+A +LF EM+ ++   D
Sbjct: 337 FCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD 396

Query: 367 TCTYRTFIDG 376
           T ++   IDG
Sbjct: 397 TISFNIMIDG 406



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++G L K+      L LF  +   G  P   TY++LIN  CK G +   F I
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLINGL 126
           F  +L       VV++ +LI GLC   ++ EA  LF+ L   G   EP+VIT+NT+I GL
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A+ ++  M    G  G +F     T  I+I    K G +DKA EL+ ++   
Sbjct: 268 CKEGRLDKAVEIYDTMIE-RGSFGNLF-----TCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+  TY+ +I GFC  +  N AKGL   M   G+ P +   N +M  LCK   ++ A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            RL   M + +  P+  ++N ++DG    G I+  KEL   M+ MG   D ++Y+  IN 
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K  ++EEA   ++ +   GI P    Y++L  G     + E  + L  +M    V  D
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILD 501

Query: 367 TCTYRTFIDGLC 378
                + +  LC
Sbjct: 502 LEITNSILTFLC 513



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 153/267 (57%), Gaps = 8/267 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P++++YNT+INGLC+      A++L  EM   + E      PN+ TY I++DGLCKEG V
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCE------PNSFTYCILMDGLCKEGRV 61

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           ++A  L  +MK + L  +VV Y++LI GFC     +  K L  EM+++G+ PNVV  + +
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N  CK G    A+ +L  M +  ++P+ +TY  ++ G C  G+  +  +LF  M   G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           +    +YN+LING CK   + +A  ++  +  KG +  VV+YNTL  GL    + + A+K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 354 LFVEM--QGNDVAADTCTYRTFIDGLC 378
           LF  +   GN V  D  T+ T I GLC
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLC 268



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 183/360 (50%), Gaps = 11/360 (3%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +  I + PD+ +Y+ +IN  CK  ++     +   +  S   PN  T+  L+ GLC E R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA  L  ++K  G E +V+ Y+TLI+G C  G       LF EM     E G+   PN
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEML----EKGI--SPN 114

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V YS +I+G CK+G   +A  +   M    + P+V TYT +I G C      +A  L  
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M ++G +P+ V+ NV++N LCK G + +A ++ + M++   R    +YNTL+ G C  G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234

Query: 277 KINRVKELFVSMESMG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           K++   +LF S+   G   + D  ++N +I G CK   +++A+ +Y+ +  +G    + T
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YARRK 391
            + L     +    ++A++L+  +    +   + TY   IDG C    + F    ++R K
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 6/236 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +IL+G   K+   D  + L+KR++ +GL P   TYS++I+ FCKM  ++    +F R+  
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S  +P +  + +L+  LC ES + +A  LF ++K   CEP+ I++N +I+G  + G    
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A    KE+ N   ++G+   P+  TYS  I+ L K G +++AK  F  M    + P+   
Sbjct: 416 A----KELLNDMQQMGLT--PDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           Y SLI GF   ++  E   LL +M D GV  ++  +N I+  LC + +  +   LL
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SFNI++    K     +   L   +  +GL PD YTYS  IN   K+GQ+      
Sbjct: 395 PDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGA 454

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ S   P+   + SLIKG      I E   L  ++   G   ++   N+++  LC 
Sbjct: 455 FDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCN 514

Query: 129 TGHTIVALNLF 139
           +   +  + L 
Sbjct: 515 SAEHLHVMELL 525


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 200/400 (50%), Gaps = 41/400 (10%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           +LL    K K ++    L K       FP+   Y+ +IN FCK GQV   F +   +   
Sbjct: 81  VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLINGLCRTGHTI 133
               +V+  ++LI+GLC + RI EA     + K+ G  C PNVITYNT++NGLC+     
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEECSPNVITYNTVVNGLCKANRID 197

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL LF +M     E     +P+ ++YS +ID LCK   VDKA E F +M+     PNVV
Sbjct: 198 EALELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGV------------------------------ 223
           TY+SLI G C  +  +E   LL+ M ++G                               
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 224 -----QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                +PNVV+ NV ++ LCK G++D A R+L  MV+  V P+  TY++++DGFC  G++
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++  ++F  M    C     ++  L++G+ ++K+  EA  ++ ++   G  P + TYN L
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              +      E AL+++ +M+      D  TY   I  LC
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 181/374 (48%), Gaps = 9/374 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V S++ ++  L K +  D     FKR+ ++G  P++ TYS LI+  CK+ + S 
Sbjct: 214 HGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSE 273

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +    F  N++ F +++  L       +A   F +L   G +PNV+TYN  ++
Sbjct: 274 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH 333

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G    A  +  EM            P+ +TYS IIDG CK G +DKA ++F +M 
Sbjct: 334 GLCKAGRVDEAYRILLEMVESK------VTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+ VT+ +L+HGF       EA  +  +MV+ G  P + + NV+M+ +C    ++
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M +   +P+  TY  L+   C   +++  KE    ME+     +    + L+
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
              CK  EV+EA S+ + +   G +P   T+  L   L+  ++ E A KL   ++     
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFV 564

Query: 365 ADTCTYRTFIDGLC 378
           AD  TY   +  +C
Sbjct: 565 ADAATYSLCVAEIC 578



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 179/368 (48%), Gaps = 9/368 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  FN +L  L KN   +     F+RL   G  P++ TY++ ++  CK G+V   + I  
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++ S   P+V+T++S+I G C   R+ +A  +FT++    C P+ +T+ TL++G     
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 409

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            +  A  + ++M N        F P   TY++++D +C    V+ A E++ +MK +   P
Sbjct: 410 KSREAFRVHEDMVNAG------FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 463

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +  TY  LI   C A   +EAK  L  M    V PN    + ++  LCK G++D A  +L
Sbjct: 464 DCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 523

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D +V+   +P   T+  L++   L  K     +L   + S G   D  +Y++ +   CK 
Sbjct: 524 DNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKA 580

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + +EA+ +  ++  KG++P   TY  +   L  + + E A+  F +M     A    TY
Sbjct: 581 GKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTY 640

Query: 371 RTFIDGLC 378
              I   C
Sbjct: 641 TLLIGEAC 648



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 143/310 (46%), Gaps = 51/310 (16%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G + N  T   L+N   +      A  L KE      E+  +  PN + Y+ +I+G CK 
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE------ELEPLCFPNEIMYTTVINGFCKA 124

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G VD+A EL  +MK   +  +V+ +++LI G C     +EA      M ++   PNV++ 
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITY 183

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQ-------CDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           N ++N LCK  ++D A  L D M +       C+  P+  +Y+T++D  C   ++++  E
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCE--PDVISYSTVIDALCKAQRVDKAYE 241

Query: 284 LFVSMESMGCKHDDFSYNILINGYC----------------------------------- 308
            F  M ++GC  +  +Y+ LI+G C                                   
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN E E+A   +  L   G KP VVTYN   HGL +  + + A ++ +EM  + V  D  
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361

Query: 369 TYRTFIDGLC 378
           TY + IDG C
Sbjct: 362 TYSSIIDGFC 371



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 27/287 (9%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+   +L G  +++K       + + + + G  P L TY++L++C C    V     
Sbjct: 393 PHPVTFMTLLHG-FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 451

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I+ ++ R    P+  T+  LI+ LC   R+ EA      ++A    PN    + L+  LC
Sbjct: 452 IYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 511

Query: 128 RTGHTIVALNLFKEMTN-GNGEIGVVFK-------------------------PNTVTYS 161
           + G    A ++   +   G   +G  FK                          +  TYS
Sbjct: 512 KQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYS 571

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           + +  +CK G  D+A E+  QM  + + P+  TY +++   C  +    A     +M  +
Sbjct: 572 LCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASR 631

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           G  P +V+  +++ E C     D A R+ + MV     P A T  TL
Sbjct: 632 GCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 104/268 (38%), Gaps = 38/268 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+L+ C+      ++ L ++ ++      PD  TY+ LI C C+  +V      
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP-------------- 114
              +      PN     +L++ LC +  + EA ++   +   GC+P              
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 115 ------------------NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
                             +  TY+  +  +C+ G    A+ + ++M           +P+
Sbjct: 548 RKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG------VRPD 601

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY  ++  LC    V+ A   F +M      P +VTYT LI   C A+  +EA  +  
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFE 661

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            MV  G  P   +   + + L   G  D
Sbjct: 662 AMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 186/342 (54%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   GL  D  TY+ LIN  C+ G++     +   +       + VT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA  +  K+      PNV+TY  L +GLC+ G    A  L  EM +   E+    
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N  TY+ +I+GLCK G +++A    + M    L P+V TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+D+G++P +V+ NV+MN  C +G+++   RLL+ M++ ++ PN  TYN+LM  +C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M S     ++ +YNILI G+CK + ++EAL  ++E+  KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +YN L   L + ++   A +LF +M+   + A+   Y  +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NILL  L           LF  + S    PD+ TY I+++ +C + ++     +   +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  N V +TS+I  LC E ++ +A  +   +   G   +   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N F EM             + VTY+ +I+GLC+ G + +A+ +  +M+ + L+ + 
Sbjct: 372 AAARNWFDEMQKRG------LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT LI G+C      EA  +  +MV + V PNVV+   + + LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  N FTYN+L++G C  G + +     + M+  G K D ++Y  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A SL  E+  KGIKPT+VTYN L +G     + E   +L   M   ++  +T TY +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 373 FIDGLCVRPQVRFTYARRKG 392
            +   C+   ++ T    KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKG 625



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V ++ I++         +T + L   + + GL  +   Y+ +I   C  GQVS   
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++      +   FT+++ G C +  +  A   F +++  G   + +TY  LINGL
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  + +EM +   ++      + VTY+++IDG CK G + +A  +  +M  +
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDV------DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTYT+L  G C   D   A  LL EM  +G++ N+ + N ++N LCK G ++ A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R +  M +  ++P+ +TY T++   C + +++R   L   M   G K    +YN+L+NG
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C +  VE    L   +  K I P   TYN+L       +  +   +++  M   +V  +
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPN 634

Query: 367 TCTYRTFIDGLC 378
             TY   I G C
Sbjct: 635 ENTYNILIKGHC 646



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 189/408 (46%), Gaps = 52/408 (12%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S  PVS F++LL CL           L  RL   G+ P   +      C   + ++ L  
Sbjct: 195 SSDPVS-FDLLLLCLPSA-------PLLLRLRQYGISPSPES------CNAVLCRLPLDE 240

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  ++ +     N  ++  L+K LC   RI +A  LF ++ +    P+V+TY  +++G 
Sbjct: 241 AV--QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGY 295

Query: 127 CRTGHTIVALNLFKEMTNGNGEI-------------------------------GVVFKP 155
           C       A+ L  EM     E+                               GVV   
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-- 353

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +   ++ ++ G C++G +  A+  F +M+   L  + VTYT+LI+G C A +  EA+ +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM D+G+  + V+  V+++  CK GKM  A  + + MVQ  V PN  TY  L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G +    EL   M S G + + F+YN LING CK   +E+A+    ++   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            T+   L + ++ +RA  L  EM    +     TY   ++G C+  +V
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++G L ++K  D   SL + +   G+ P + TY++L+N FC  G+V  G  +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ SL+K  C E  +     ++  + +    PN  TYN LI G C+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL    EM          F+    +Y+ +I  L K+    +A+ LF +M+ E L
Sbjct: 648 ARNMKEALYFHSEMIEKG------FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 189 --NPNVVTY 195
              P+V  +
Sbjct: 702 TAEPDVYNF 710


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ LI+ F K  Q+     +  R+    F P+VVT+  +I   C+  ++  A  +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F +L    CEP VITY  LI      G   VA+ L  EM +         +P+T+TY+ I
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG------LEPDTLTYNAI 249

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKE  VDKA EL   +      P+++TY  L+        W+E + L+ EM+  G 
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PNVV+ ++++  LC++GK++ A  LL  M +  ++P+A+ Y+ L+ GFC  G+++   E
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               M S GC  D  +YN ++ G C+  + ++AL ++ +L   G  P V +YNTLF  L+
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL++ +++    +  D  TY + I  LC
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC 464



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++G        D  L +F+ L      P + TY+ILI      G + +   +
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+ +T+ ++I+G+C E  + +A  L   L + GC+P++ITYN L+  L  
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM      I +  KPN VT+SI+I  LC++G V++A  L   MK + L
Sbjct: 291 RGKWSEGEKLISEM------ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  LI GFC     + A   L  M+  G  P++V+ N IM  LC+ GK D A  
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +    PN  +YNTL      +G   R  E+ + + + G   D+ +YN LI+  C
Sbjct: 405 VFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC 464

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  V+EA+ L  ++     +P VV+YN +  GL ++ +A  A+++   M       +  
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 525 TYILLIEGI 533



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K    +    +  R+ S G  PD+ TY+I+I  FC  G++ L   I
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+    P V+T+T LI+    +  I  A  L  ++ + G EP+ +TYN +I G+C+
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L + +++         KP+ +TY+I++  L   G   + ++L  +M     
Sbjct: 256 EMMVDKAFELLRSLSSRG------CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVT++ LI   C      EA  LL  M ++G++P+    + ++   C+ G++D A+ 
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ M+     P+   YNT+M G C TGK ++  E+F  ++ +GC  +  SYN L +   
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            + +   AL +  +L  +GI P  +TYN+L   L      + A++L V+MQ      +  
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 369 TYRTFIDGLC 378
           +Y   + GLC
Sbjct: 490 SYNIILLGLC 499



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 136/327 (41%), Gaps = 42/327 (12%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+N  C+ G+ +        ++   + P+V+  T LIKG      I +A  +   L+ +G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
                                                     KP+   Y+ +I G  K  
Sbjct: 135 ------------------------------------------KPDVFAYNALISGFIKAN 152

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++ A  +  +MK     P+VVTY  +I  FC     + A  +  E++    +P V++  
Sbjct: 153 QLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYT 212

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           +++     +G +D A +LLD M+   + P+  TYN ++ G C    +++  EL  S+ S 
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GCK D  +YNIL+       +  E   L +E+   G KP VVT++ L   L    + E A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + L   M+   +  D   Y   I G C
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFC 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 108/213 (50%), Gaps = 1/213 (0%)

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+ G  +++      M  +   P+V+  T LI GF ++ +  +A  ++ E++++  +P+V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDV 138

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
            + N +++   K  +++NA+R+LD M      P+  TYN ++  FC  GK++   E+F  
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +    C+    +Y ILI     +  ++ A+ L +E+  KG++P  +TYN +  G+ +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            ++A +L   +       D  TY   +  L  R
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSR 291



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP VSS+N L   L  +      L +  +L + G+ PD  TY+ LI+C C+ G V     
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +    + PNVV++  ++ GLC  +R  +A  +   +   GC+PN  TY  LI G+ 
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIG 534

Query: 128 RTGHTIVALNLFKEMTNGNG 147
            +G    A+ L   +   N 
Sbjct: 535 FSGLRAEAMELANSLHGMNA 554


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 210/396 (53%), Gaps = 12/396 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L  L K      V  LF  +   G+ P + TY+ LIN     G V+  + +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + +++     PNVVT+T++I  LC E  I +A  LF ++K  G  PN+ TYN L++   +
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL  + ++     + G+V  PN V ++ +IDGLCK   + +AK +FL M    +
Sbjct: 256 RDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEV 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V  Y SLIHG   +    EA     E++ + ++P+  + ++++  LC  G+M  A+R
Sbjct: 310 APTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATR 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L++M Q  +  NA  YN L+D +C +G ++        M  +G + +  +Y+ LI+G+ 
Sbjct: 370 FLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHS 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN E+E A+++Y E+  KG++P VVTY  L HG  +    + A  L  EM+   + ++  
Sbjct: 430 KNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAI 489

Query: 369 TYRTFIDGLC----VRPQVRF--TYARRKGNSGNTN 398
           T    +DGLC    V+  VRF   Y+ +K +  N +
Sbjct: 490 TVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPS 525



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 182/379 (48%), Gaps = 16/379 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L +         LF  +   G+ P+LYTY+ L++   K   +    V 
Sbjct: 206 PNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L+    PN V FT+LI GLC  +RI EA  +F  +  +   P V  YN+LI+G  R
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   AL  F+E+           +P+  T SI++ GLC  G +  A      M+   +
Sbjct: 326 SGYAQEALAFFQEIIRKE------LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGI 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   Y  LI  +C + + +EA      M + GV+PNVV+ + +++   KNG+M+ A  
Sbjct: 380 ALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMA 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   V PN  TY  L+ G    G ++    L   ME  G   +  + ++L++G C
Sbjct: 440 IYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLC 499

Query: 309 KNKEVEEALSLYNELPFKGIK-----PTV---VTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +   V++A+    E  + G K     P++   VTY TL +GL+   Q   A   F  M+ 
Sbjct: 500 RENRVQDAVRFIME--YSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRD 557

Query: 361 NDVAADTCTYRTFIDGLCV 379
           + +  D  TY   I GLC+
Sbjct: 558 SGMVPDRFTYTLVIRGLCM 576


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 186/342 (54%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +   GL  D  TY+ LIN  C+ G++     +   +       + VT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA  +  K+      PNV+TY  L +GLC+ G    A  L  EM +   E+    
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N  TY+ +I+GLCK G +++A    + M    L P+V TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM+D+G++P +V+ NV+MN  C +G+++   RLL+ M++ ++ PN  TYN+LM  +C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           +   +    E++  M S     ++ +YNILI G+CK + ++EAL  ++E+  KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +YN L   L + ++   A +LF +M+   + A+   Y  +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NILL  L           LF  + S    PD+ TY I+++ +C + ++     +   +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  N V +TS+I  LC E ++ +A  +   +   G   +   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A N F EM             + VTY+ +I+GLC+ G + +A+ +  +M+ + L+ + 
Sbjct: 372 AAARNWFDEMQKRG------LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT LI G+C      EA  +  +MV + V PNVV+   + + LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    +  N FTYN+L++G C  G + +     + M+  G K D ++Y  +I   C++KE
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A SL  E+  KGIKPT+VTYN L +G     + E   +L   M   ++  +T TY +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 373 FIDGLCVRPQVRFTYARRKG 392
            +   C+   ++ T    KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKG 625



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V ++ I++         +T + L   + + GL  +   Y+ +I   C  GQVS   
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++      +   FT+++ G C +  +  A   F +++  G   + +TY  LINGL
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  + +EM +   ++      + VTY+++IDG CK G + +A  +  +M  +
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDV------DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTYT+L  G C   D   A  LL EM  +G++ N+ + N ++N LCK G ++ A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R +  M +  ++P+ +TY T++   C + +++R   L   M   G K    +YN+L+NG
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C +  VE    L   +  K I P   TYN+L       +  +   +++  M   +V  +
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPN 634

Query: 367 TCTYRTFIDGLC 378
             TY   I G C
Sbjct: 635 ENTYNILIKGHC 646



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 189/408 (46%), Gaps = 52/408 (12%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S  PVS F++LL CL           L  RL   G+ P   +      C   + ++ L  
Sbjct: 195 SSDPVS-FDLLLLCLPSA-------PLLLRLRQYGISPSPES------CNAVLCRLPLDE 240

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  ++ +     N  ++  L+K LC   RI +A  LF ++ +    P+V+TY  +++G 
Sbjct: 241 AV--QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGY 295

Query: 127 CRTGHTIVALNLFKEMTNGNGEI-------------------------------GVVFKP 155
           C       A+ L  EM     E+                               GVV   
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL-- 353

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +   ++ ++ G C++G +  A+  F +M+   L  + VTYT+LI+G C A +  EA+ +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM D+G+  + V+  V+++  CK GKM  A  + + MVQ  V PN  TY  L DG C  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G +    EL   M S G + + F+YN LING CK   +E+A+    ++   G+KP V TY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            T+   L + ++ +RA  L  EM    +     TY   ++G C+  +V
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++G L ++K  D   SL + +   G+ P + TY++L+N FC  G+V  G  +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PN  T+ SL+K  C E  +     ++  + +    PN  TYN LI G C+
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL    EM          F+    +Y+ +I  L K+    +A+ LF +M+ E L
Sbjct: 648 ARNMKEALYFHSEMIEKG------FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 189 --NPNVVTY 195
              P+V  +
Sbjct: 702 TAEPDVYNF 710


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 211/437 (48%), Gaps = 60/437 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+G L  +   D    LF ++   G  P+ Y++ IL+  +C+ G  S G  +
Sbjct: 54  PETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL 113

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + R  F+PN V + +LI   C E +  +A  L  +++  G  P+V+T+N  I+ LC 
Sbjct: 114 LGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCS 173

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  + A  +F++M     E+  + +PN +TY++++ G CKEG +++A+ LF +MK    
Sbjct: 174 SGKVLEASRIFRDMQID--EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  +Y   + G        EA+ +L EMVD G++PNV S N++M+ LCKNG + +A  
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL----- 303
           L+ LM    V P+  TY TL+ G+C TGK++    +   M   GC  ++++ NIL     
Sbjct: 292 LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351

Query: 304 ------------------------------INGYCKNKEVEEALSLYNELPFKGIK---- 329
                                         I+G C N ++++A+ + N +   G      
Sbjct: 352 KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411

Query: 330 -------------------PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
                              P +++Y+T+  GL +  +   A K F+EM G ++  D+  Y
Sbjct: 412 LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIY 471

Query: 371 RTFIDGLCVRPQVRFTY 387
             FI   C   ++   +
Sbjct: 472 DVFIHSFCKEGKISSAF 488



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 65/430 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NI++  L KN        L + + S G+ PD  TY+ L++ +C  G+VS    +
Sbjct: 268 PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 327

Query: 69  FGRILRSCFAPN-----------------------------------VVTFTSLIKGLCA 93
              ++R   +PN                                    VT   +I GLC 
Sbjct: 328 LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCN 387

Query: 94  ESRIVEAAALFTKLKAFG-----------------------CEPNVITYNTLINGLCRTG 130
             ++ +A  +   +   G                       C P++I+Y+T+I+GLC+ G
Sbjct: 388 NGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAG 447

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A   F EM   N       +P++  Y + I   CKEG +  A  +   M+ +  N 
Sbjct: 448 RVGEAKKKFIEMMGKN------LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNK 501

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            + TY SLI G    N   E  GL+ EM ++GV P+V   N +++ LC+ G++ +A  +L
Sbjct: 502 TLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVL 561

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M+Q  + PN  +++ L+  FC     + V E+F    ++ C H +  Y++  N     
Sbjct: 562 DEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV-CGHKEALYSLTFNELLVG 620

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            EV +A  L+     +        Y  L   L +  + + A  +  ++       D  ++
Sbjct: 621 GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASF 680

Query: 371 RTFIDGLCVR 380
              IDGL  R
Sbjct: 681 MPVIDGLGKR 690



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 4/227 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+   Y++++    KEG VD    L   M    ++P   T+  LI   C +   ++A+ L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +M ++G +PN  S  +++   C+ G       LL  M +    PN   YNTL+  FC 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI----KP 330
            GK +  ++L   M   G   D  ++N  I+  C + +V EA  ++ ++    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            ++TYN +  G  +    E A  LF +M+ ++   +  +Y  ++ GL
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGL 245



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 7/281 (2%)

Query: 43  FPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
            PDL +YS +I+  CK G+V      F  ++     P+   +   I   C E +I  A  
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           +   ++  GC   + TYN+LI GL           L  EM     E GV   P+   Y+ 
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR----ERGV--SPDVSIYNN 543

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++  LC+ G V  A  +  +M  + ++PN+ +++ LI  FC A D++ A   + E+    
Sbjct: 544 VLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFS-AVDEIFEIALNV 602

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
                   ++  NEL   G++  A  L +  +        F Y  L+D  C   K++   
Sbjct: 603 CGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDAS 662

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            +   +   G   D  S+  +I+G  K     EA  L  ++
Sbjct: 663 GILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 7/226 (3%)

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           L+ ++    P++  Y  L+         +    L  +MV  GV P   + NV++  LC +
Sbjct: 10  LRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDS 69

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D+A  L D M +    PN +++  L+ G+C  G  ++  EL   M  +G   +   Y
Sbjct: 70  GCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVY 129

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+ +CK  + ++A  L +E+   G+ P VVT+N     L    +   A ++F +MQ 
Sbjct: 130 NTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 361 NDVAA----DTCTYRTFIDGLC---VRPQVRFTYARRKGNSGNTNR 399
           ++V      +  TY   + G C   +  + R  + + K +    NR
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNR 235



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 13/287 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ ++  L K          F  +    L PD   Y + I+ FCK G++S  F +
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +      + T+ SLI GL ++++I E   L  +++  G  P+V  YN +++ LC 
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE---GFVDKAKELFLQMKY 185
            G    A ++  EM            PN  ++SI+I   CK      VD+  E+ L +  
Sbjct: 551 GGRVKDAPSVLDEMLQKG------ISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCG 604

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                  +T+  L+ G     +  +AK L    +D+           +++ LCK+ K+D+
Sbjct: 605 HKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDD 660

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           AS +L  ++      +  ++  ++DG    G  +   EL   M  M 
Sbjct: 661 ASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMA 707


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 194/371 (52%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  + CL +N H    L +   +   G  PD++TY+ +INC  K G++     I
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             +++ R C  P+  TF +LI  LC+++R+ EA  L  +L   G  P+V T+N LIN LC
Sbjct: 358 VNQMVDRGCL-PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   + + LF+EM +          P+ VTY+I+ID LC  G +  A +L  +M+   
Sbjct: 417 KVGDPHLGIRLFEEMKSSG------CAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              + VTY ++I   C      EA+ +  +M   G+  + V+ N +++ LCK  ++D+A+
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L++ MV+  ++P+  TYN+++  +C  G + +  ++  +M + G + D  +Y  LING 
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK    + AL L   +  KGI+PT   YN +   LF       AL LF EM       D 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 368 CTYRTFIDGLC 378
            TY+    GLC
Sbjct: 651 LTYKIVFRGLC 661



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 193/369 (52%), Gaps = 14/369 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  LA+      + S++  +   G+ PD+ T + LI   C+  QV    ++   + 
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               AP+  TFT+L++G   E  I  A  + TK+   GC P  +T N LING C+ G   
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 134 VALN-LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            AL  + KE+ +G       F+P+ VTY+  +  LC+ G V  A ++   M  E  +P+V
Sbjct: 283 DALGYIQKEIADG-------FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV 335

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY ++I+      + +EAKG++ +MVD+G  P+  + N ++  LC   +++ A   LDL
Sbjct: 336 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA---LDL 392

Query: 253 MVQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
             +  V+   P+ +T+N L++  C  G  +    LF  M+S GC  D+ +YNILI+  C 
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             ++  AL L  E+   G   + VTYNT+   L +  + E A ++F +M  + ++    T
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512

Query: 370 YRTFIDGLC 378
           + T IDGLC
Sbjct: 513 FNTLIDGLC 521



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 182/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L +     T + + + ++S  + PD  T++ L+  F + G +     +
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ +  +P  VT   LI G C   R+ +A     K  A G EP+ +TYNT ++ LC+
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL +   M     +      P+  TY+ +I+ L K G +D+AK +  QM     
Sbjct: 313 NGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T+ +LI   C  N   EA  L  E+  +G+ P+V + N+++N LCK G      R
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYN L+D  C  GK+    +L   MES GC     +YN +I+  C
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++   GI  + VT+NTL  GL + ++ + A +L  +M    +     
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546

Query: 369 TYRTFIDGLC 378
           TY + +   C
Sbjct: 547 TYNSILTHYC 556



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 13/364 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN L+  L      +  L L + L   GL PD+YT++ILIN  CK+G   LG  +
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S  AP+ VT+  LI  LC+  ++V A  L  ++++ GC  + +TYNT+I+ LC+
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M + +G        + VT++ +IDGLCK   +D A EL  QM  E L
Sbjct: 488 QMRIEEAEEVFDQM-DAHG-----ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 541

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY S++  +C   D  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 542 QPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALK 601

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    +RP    YN ++        +     LF  M  +G   D  +Y I+  G C
Sbjct: 602 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLC 661

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE---MQGN 361
           +    ++EA     E+  KG  P   ++  L  GL  +   +    A++L +E    + +
Sbjct: 662 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRES 721

Query: 362 DVAA 365
           DV+A
Sbjct: 722 DVSA 725



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 190/387 (49%), Gaps = 8/387 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P  ++F  L+    +    +  L +  ++   G  P   T ++LIN +CKMG+V  
Sbjct: 224 HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVED 283

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
                 + +   F P+ VT+ + +  LC    +  A  +   +   G +P+V TYNT+IN
Sbjct: 284 ALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 343

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L + G    A  +  +M +     G +  P+T T++ +I  LC +  +++A +L  ++ 
Sbjct: 344 CLSKNGELDEAKGIVNQMVDR----GCL--PDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L+P+V T+  LI+  C   D +    L  EM   G  P+ V+ N++++ LC  GK+ 
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           NA  LL  M       +  TYNT++D  C   +I   +E+F  M++ G      ++N LI
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G CK K +++A  L  ++  +G++P+ +TYN++     +    ++A  +   M  N   
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577

Query: 365 ADTCTYRTFIDGLCV--RPQVRFTYAR 389
            D  TY T I+GLC   R QV     R
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLR 604



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 22  AKNKHYDTVLSLFK-RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           A+ + +D  + L + +LN+ G+  D   Y+ L+N   +  ++ L   ++  +      P+
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VVT  +LIK LC   ++  A  +  ++ +    P+  T+ TL+ G    G    AL +  
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           +M     E G    P  VT +++I+G CK G V+ A     +   +   P+ VTY + +H
Sbjct: 255 KMM----ETGC--SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVH 308

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
             C     + A  ++  M+ +G  P+V + N ++N L KNG++D A  +++ MV     P
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 368

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  T+NTL+   C   ++    +L   +   G   D +++NILIN  CK  +    + L+
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 428

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            E+   G  P  VTYN L   L  + +   AL L  EM+ N     T TY T ID LC  
Sbjct: 429 EEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC-- 486

Query: 381 PQVRFTYA 388
            Q+R   A
Sbjct: 487 KQMRIEEA 494



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 7/249 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F ++++ G+     T++ LI+  CK  ++     
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++++    P+ +T+ S++   C +  + +AA +   + A G E +V+TY TLINGLC
Sbjct: 532 LIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC 591

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL L + M           +P    Y+ +I  L +   +  A  LF +M    
Sbjct: 592 KAGRTQVALKLLRGMRIKG------IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645

Query: 188 LNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +  G C       EA   L+EMV++G  P   S  ++   L   G  D  
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYL 705

Query: 247 SRLLDLMVQ 255
              ++L+++
Sbjct: 706 ISAIELIIE 714



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 1/129 (0%)

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           D  P+   Y  ++      G  + ++ L   M   G +         +  Y + +  ++A
Sbjct: 84  DFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDA 143

Query: 317 LSLY-NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           + L  N+L   G++     YN L + L E  + +    ++ EM    +  D  T  T I 
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203

Query: 376 GLCVRPQVR 384
            LC   QVR
Sbjct: 204 ALCRAHQVR 212


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 213/444 (47%), Gaps = 68/444 (15%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM- 59
           M  M P PP    FN LL  +AK KH+ T+LSL  +++S G+ P++YT  ILIN FC + 
Sbjct: 52  MLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 60  -GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA------------------------- 93
            G++     +F +++   F P+VVT+ +LI GLC                          
Sbjct: 111 RGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 170

Query: 94  ----------ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
                     + ++ EA  LF+++   G  P++ TYN+LI+ LC          L  EM 
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230

Query: 144 NG------------------NGEI----GVVFK--------PNTVTYSIIIDGLCKEGFV 173
           +                    G++     VV K        PN ++Y+ +I+G CK   +
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA  LF +M  + L P+ VTY++LIHG CH     +A  L  EMV     PN+V+  ++
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCKN  +  A  LL  +   ++ P+    N  +DG C  G++   ++LF ++ S G 
Sbjct: 351 LDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D ++Y+I+ING C+   ++EA  L+ E+   G       YNT+  G     +  RA++
Sbjct: 411 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 470

Query: 354 LFVEMQGNDVAADTCTYRTFIDGL 377
           L  EM     +AD  T   F+  L
Sbjct: 471 LLQEMVARGFSADASTMTLFVKML 494



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 163/313 (52%), Gaps = 9/313 (2%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+LR    P+ V F  L+  +          +L  ++ +FG  PN+ T + LIN  C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 129 --TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
              G    AL+LF +M      IG  F+P+ VTY  +I+GLCK G    A  L   M  +
Sbjct: 109 LNRGKIGEALHLFDKM------IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N  PNV  Y ++I   C      EA  L  EMV +G+ P++ + N +++ LC   +  + 
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILIN 305
           + LL+ MV   + P+  ++NT++D  C  GK+    ++   M +  GC  +  SYN LIN
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCK + +++A+ L+ E+  + + P  VTY+TL HGL  + + + A+ LF EM       
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342

Query: 366 DTCTYRTFIDGLC 378
           +  TYR  +D LC
Sbjct: 343 NLVTYRILLDYLC 355



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 36/266 (13%)

Query: 9   PPVSSFNILLGCLAKN----KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P V SFN ++  L K     + +D V  + +R    G  P++ +Y+ LIN +CK+ ++  
Sbjct: 236 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG---GCMPNVISYNTLINGYCKIQRIDK 292

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +FG + R    P+ VT+++LI GLC   R+ +A ALF ++ A    PN++TY  L++
Sbjct: 293 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 352

Query: 125 GLCRTGHTIVALNLFKEMTNGN------------------GEIGVV-----------FKP 155
            LC+  +   A+ L K +   N                  GE+               +P
Sbjct: 353 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  TYSI+I+GLC+ G +D+A +LF +M       N   Y ++  GF   N+ + A  LL
Sbjct: 413 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 472

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNG 241
            EMV +G   +  +  + +  L  +G
Sbjct: 473 QEMVARGFSADASTMTLFVKMLSDDG 498



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 2/213 (0%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M      P+ V +  L+         +    L  +M   G+ PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 233 IMNELCK--NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           ++N  C    GK+  A  L D M+    RP+  TY TL++G C  G  +    L  SM  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
             C+ + F+YN +I+  CK+++V EA +L++E+  KGI P + TYN+L H L  + + + 
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              L  EM  + +  D  ++ T +D LC   +V
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 254



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD---VRP 260
           H N  + A      M+     P+ V  N ++  +    KM + S LL L  Q D   + P
Sbjct: 38  HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPP 94

Query: 261 NAFTYNTLMDGFCL--TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           N +T + L++ FC    GKI     LF  M   G + D  +Y  LING CK      A+ 
Sbjct: 95  NIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 154

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L   +  K  +P V  YNT+   L + RQ   A  LF EM    ++ D  TY + I  LC
Sbjct: 155 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 214


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 184/338 (54%), Gaps = 6/338 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P+L T S L+   C  G+V     +F ++ RS F  +++ +  LI  L    +   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  ++ +  C  N  TY  +I+ LC+ G  I  L +F+EM N    +G+   PN + Y
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMIN----MGIC--PNVIVY 117

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +I+GLC+ G + +A  LF +M  + +  NV+TY SLIH  C    W EA     +MV 
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVG 177

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+ P+VV+   +++ L K GK+  A ++ +LM++    PN  TYN+L++G CL  +++ 
Sbjct: 178 EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              LF  M   G K D  SYN LINGYC + + EEA++L+ ++ ++ + P++ TY  L  
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L++  +   A +LF  MQ    +    TY   +DGLC
Sbjct: 298 ALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC 335



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+  L K +     + L +R+ S     + +TY ++I+  CK G    G  +F  ++
Sbjct: 47  YGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMI 106

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNV+ ++SLI GLC   ++ EA  LF ++ + G + NVITYN+LI+  CR G   
Sbjct: 107 NMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWK 166

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A   F +M      +G    P+ VT++ +ID L K+G V +A ++F  M  +   PN+V
Sbjct: 167 EATRTFSQM------VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIV 220

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY SL++G C  +  + A  L   MV++G++ +V+S N ++N  C +GK + A  L   M
Sbjct: 221 TYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
              ++ P+  TY  L+      G+I   KELF +M+  G      +Y +L++G CKN  +
Sbjct: 281 QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCI 340

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           EEA+ ++  L     KP++  Y+ L  G+F+ R+ E A+++F E+    +  +  TY   
Sbjct: 341 EEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIM 400

Query: 374 IDGLC 378
           I+GLC
Sbjct: 401 INGLC 405



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 168/320 (52%), Gaps = 6/320 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+    +   +      F ++   G+ PD+ T++ LI+   K G+V   + IF 
Sbjct: 149 VITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFE 208

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +++   APN+VT+ SL+ GLC   ++  A  LF  +   G + +VI+YNTLING C +G
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A+ LF++M            P+  TY+I++  L + G +  AKELF  M+    +P
Sbjct: 269 KTEEAMTLFRKMQYEE------LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP 322

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TYT L+ G C      EA  +   +     +P++   ++++  + +  + ++A  + 
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D +    + PN  TYN +++G C  GK+   + LFV ME  GC+ D+ S+N +I G+ + 
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 311 KEVEEALSLYNELPFKGIKP 330
            +V++A+     +  K   P
Sbjct: 443 NQVQKAMEFLKRMREKNFSP 462



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 180/351 (51%), Gaps = 6/351 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ L+  L +       ++LF  + S G+  ++ TY+ LI+  C+ G        
Sbjct: 112 PNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRT 171

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     P+VVTFT+LI  L  + ++ EA  +F  +   G  PN++TYN+L+NGLC 
Sbjct: 172 FSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCL 231

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF+ M     E G+  K + ++Y+ +I+G C  G  ++A  LF +M+YE L
Sbjct: 232 HHQMDHAVRLFEVMV----ERGI--KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEEL 285

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ TYT L+           AK L   M   G  P++ +  V+++ LCKNG ++ A  
Sbjct: 286 TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAID 345

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   +     +P+   Y+ L+ G     +     E+F  + ++G   +  +YNI+ING C
Sbjct: 346 VFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           K  ++ EA  L+ ++   G +   +++N +  G  +  Q ++A++    M+
Sbjct: 406 KEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%)

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VT ++L+ G C      +A  L  +M   G Q +++    ++N L K  +   A  
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+      N FTY  ++D  C  G   +  ++F  M +MG   +   Y+ LING C
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++ EA++L++E+  +GIK  V+TYN+L H        + A + F +M G  +  D  
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 369 TYRTFIDGLCVRPQVRFTY 387
           T+ T ID L  + +V+  Y
Sbjct: 186 TFTTLIDHLSKKGKVQEAY 204



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
             P + ++ +LL  L KN   +  + +F+ L SI   P +  YSILI    +  +     
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF  I      PN+VT+  +I GLC E +++EA  LF +++  GCE + I++N +I G 
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
            +      A+   K M   N      F PN
Sbjct: 440 LQENQVQKAMEFLKRMREKN------FSPN 463


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 207/400 (51%), Gaps = 18/400 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            +S N LL  L + + +  + +L   +  + + P++ T+ ILIN  CK  +V     +F 
Sbjct: 305 AASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFE 364

Query: 71  RILRS-----CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLIN 124
           ++           P+V+T+ +LI GLC   R  E   L  ++++   C PN +TYN LI+
Sbjct: 365 KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLID 424

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+      A  LF +M N +G       PN VT + ++DG+CK G ++ A E F +M+
Sbjct: 425 GYCKASMIEAARELFDQM-NKDG-----VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L  N VTYT+LI  FC+ N+  +A  L  EM++ G  P+ +    +++ L + GK+D
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            AS +L  M +    P+  ++N L++GFC   K++   E+   ME+ G K D  +YN LI
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG-NDV 363
           + + K  +   A  L  ++  +G+ PTVVTY  L H        + A+K+F +M   + V
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 364 AADTCTYRTFIDGLCVRPQVRFTYA-----RRKGNSGNTN 398
             +T  Y   I+ LC + QV    +     + KG   NTN
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 200/407 (49%), Gaps = 40/407 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLN---SIGLF--PDLYTYSILINCFCKMG--Q 61
           P V +F IL+  L K +  D  L +F+++N   S G    PD+ TY+ LI+  CK+G  +
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
             LG V   R    C  PN VT+  LI G C  S I  A  LF ++   G  PNV+T NT
Sbjct: 398 EGLGLVERMRSQPRCM-PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIG--VVF-------------------------- 153
           L++G+C+ G    A+  F EM  G G  G  V +                          
Sbjct: 457 LVDGMCKHGRINGAVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515

Query: 154 --KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+ + Y  +I GL + G +D+A  +  +MK    +P++V++  LI+GFC  N  +EA
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L EM + G++P+ V+ N +++   K G    A RL+  MV+  + P   TY  L+  
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635

Query: 272 FCLTGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           +CL G ++   ++F  M S      +   YNILIN  C+  +V+ ALSL +++  KG+KP
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              T+N +F GL E     +A +L   M  +    D  T     + L
Sbjct: 696 NTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 8/374 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHY------DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           PP  ++ +I+   L+K          + ++ L  +     +FP+    + LI+  C+ G+
Sbjct: 226 PPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGR 285

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
               + +   +++        +  +L+  L           L  ++K    +PNV+T+  
Sbjct: 286 TDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGI 345

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LIN LC+      AL +F++M NG    G + +P+ +TY+ +IDGLCK G  ++   L  
Sbjct: 346 LINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVE 404

Query: 182 QMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           +M+ +    PN VTY  LI G+C A+    A+ L  +M   GV PNVV+ N +++ +CK+
Sbjct: 405 RMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKH 464

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+++ A    + M    ++ NA TY  L+  FC    I +  ELF  M   GC  D   Y
Sbjct: 465 GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVY 524

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI+G  +  +++ A  + +++   G  P +V++N L +G     + + A ++  EM+ 
Sbjct: 525 YTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584

Query: 361 NDVAADTCTYRTFI 374
             +  D  TY T I
Sbjct: 585 AGIKPDGVTYNTLI 598



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 180/369 (48%), Gaps = 10/369 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR      P   ++N L+    K    +    LF ++N  G+ P++ T + L++  CK G
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +++     F  +       N VT+T+LI+  C  + I +A  LF ++   GC P+ I Y 
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+GL + G    A  +  +M          F P+ V+++++I+G C++  +D+A E+ 
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAG------FSPDIVSFNVLINGFCRKNKLDEAYEML 579

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M+   + P+ VTY +LI  F    D++ A  L+ +MV +G+ P VV+   +++  C N
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639

Query: 241 GKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           G +D A ++  D+     V PN   YN L++  C   +++    L   M+  G K +  +
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +N +  G  +   + +A  L + +      P  +T   L   L  + +  + LK FV  Q
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK-LKSFV--Q 756

Query: 360 GNDVAADTC 368
           G +V+A   
Sbjct: 757 GYEVSASAA 765



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 184/437 (42%), Gaps = 76/437 (17%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF----------------- 69
           ++ +L LFK   S  +   +   ++LI CF +   V   F+++                 
Sbjct: 140 HNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILI 199

Query: 70  ------GRI------------LRSCFAPNVVTFTSLIKGLCAESRI------VEAAALFT 105
                 GR+             ++ F PN  T   +   L    ++       E   L +
Sbjct: 200 DVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVS 259

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNL--------------------------- 138
           K       PN I    LI+ LCR+G T  A ++                           
Sbjct: 260 KFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAR 319

Query: 139 -FKEMTNGNGEIGVV-FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN-----PN 191
            FK M     E+  +  +PN VT+ I+I+ LCK   VD+A E+F +M     N     P+
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPD 379

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLL 250
           V+TY +LI G C      E  GL+  M  Q    PN V+ N +++  CK   ++ A  L 
Sbjct: 380 VITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELF 439

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M +  V PN  T NTL+DG C  G+IN   E F  M+  G K +  +Y  LI  +C  
Sbjct: 440 DQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNV 499

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A+ L++E+   G  P  + Y TL  GL +  + +RA  +  +M+    + D  ++
Sbjct: 500 NNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSF 559

Query: 371 RTFIDGLCVRPQVRFTY 387
              I+G C + ++   Y
Sbjct: 560 NVLINGFCRKNKLDEAY 576


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 203/386 (52%), Gaps = 45/386 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MRH     PP+  FN +LG   K K+Y   +SL K++   G+ P+L T +ILINCFC +G
Sbjct: 48  MRHT----PPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLG 103

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            ++  F + G+IL+  + PN +T T+LIKGLC +  + ++     KL A G + N ++  
Sbjct: 104 HMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCG 163

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL+NGLC+ G    A+ L + + + +         N V Y+ IIDGLCK+  V++A +L+
Sbjct: 164 TLLNGLCKIGEMRGAMKLLRVIEDRST------ITNVVMYNTIIDGLCKDKLVNEAYDLY 217

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M      PNV+TY +LI GFC A    EA GLL EM+ + + P+V + N++M+ LCK 
Sbjct: 218 SEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKE 277

Query: 241 GK----------------------------------MDNASRLLDLMVQCDVRPNAFTYN 266
           GK                                  +D A  L   M +  ++PN +T++
Sbjct: 278 GKSYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHS 337

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L  G    G++   +E F  +   G   D ++Y ++I+G CK   ++EAL++  ++   
Sbjct: 338 XLT-GCVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDN 396

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERAL 352
           G  P  VT+  +   LFE  + ++AL
Sbjct: 397 GCIPNAVTFEIIICSLFEKDENDKAL 422



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 7/280 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F ++      P +I +N ++    +  +   A++L K+M     E      PN V
Sbjct: 37  DAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIE------PNLV 90

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C  G +  +  +  ++      PN +T T+LI G C  ++  ++     ++
Sbjct: 91  TLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKL 150

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V QG Q N VS   ++N LCK G+M  A +LL ++       N   YNT++DG C    +
Sbjct: 151 VAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLV 210

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           N   +L+  M+  G   +  +Y+ LI G+C   ++ EA  L  E+  K I P V TYN L
Sbjct: 211 NEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNIL 270

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              L +      AL L  E+      AD  TY + +DG C
Sbjct: 271 MDALCK-EGKSYALDLIDEIHRRRQPADVVTYTSLLDGXC 309



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 35/244 (14%)

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +  VD A   F +M      P ++ +  ++        +  A  L  +M  +G++PN+V+
Sbjct: 32  DNVVDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVT 91

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N+++N  C  G M  +  +L  +++   +PN  T  TL+ G CL  ++ +       + 
Sbjct: 92  LNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLV 151

Query: 290 SMG---------------CKHDDFS--------------------YNILINGYCKNKEVE 314
           + G               CK  +                      YN +I+G CK+K V 
Sbjct: 152 AQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVN 211

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA  LY+E+  +G  P V+TY+TL  G     Q   A  L  EM   ++  D  TY   +
Sbjct: 212 EAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILM 271

Query: 375 DGLC 378
           D LC
Sbjct: 272 DALC 275


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 184/338 (54%), Gaps = 6/338 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P++Y ++IL++ FCK+G V    ++F  I R    P+VV+F +LI G C    + E 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L + +++    P+V TY+ LINGLC+      A  LF EM     E+G+V  PN VT+
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC----EMGLV--PNGVTF 334

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG CK G +D A   F  MK   + P+++TY +LI+G C   D  EA+ LL EM+ 
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G +P+ ++   +M+  CK+G MD+A  + D MV+  +  +   +  L+ G C  G++  
Sbjct: 395 NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + +   M S G K DD +Y ++I+ +CK  +V+    L  E+   G  P VVTYN L +
Sbjct: 455 AERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMN 514

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  +  Q + A  L   M   +V  +  T+   +DG C
Sbjct: 515 GFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 167/302 (55%), Gaps = 6/302 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN L+    ++K+ +    L   + S  + PD++TYS LIN  CK  +V     +
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTFT+LI G C   +I  A   F  +K  G  P++ITYN LINGLCR
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM  GNG     FKP+ +T++ ++DG CK+G +D A E+  +M  E +
Sbjct: 379 DGDLKEARKLLNEMI-GNG-----FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T+LI G C      +A+ +L +M+  G +P+  +  ++++  CK G +   ++
Sbjct: 433 ELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAK 492

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    P   TYN LM+GFC  G++   K L  +M +M    +D ++NIL++G+C
Sbjct: 493 LLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552

Query: 309 KN 310
           K+
Sbjct: 553 KH 554



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 184/334 (55%), Gaps = 6/334 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  FNIL+    K         +F  ++  GL P + +++ LI+ +C+   V  GFV
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +     +P+V T+++LI GLC ESR+ EA  LF ++   G  PN +T+ TLI+G C
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   +AL  F+ M +         +P+ +TY+ +I+GLC++G + +A++L  +M    
Sbjct: 343 KHGKIDLALRNFEIMKDRG------IRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ +T+T+L+ G C   D + A  +   MV++G++ + V+   +++ LC++G++ +A 
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  M+    +P+  TY  ++D FC  G +    +L   M+  G      +YN L+NG+
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           CK  +++ A  L + +    + P  +T+N L  G
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 6/314 (1%)

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L   + PNV  F  L+ G C    ++ A  +F ++   G  P+V+++NTLI+G CR+ 
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +      L   M +          P+  TYS +I+GLCKE  V++A  LF +M    L P
Sbjct: 276 NVEEGFVLKSVMESER------ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVP 329

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VT+T+LI G C     + A      M D+G++P++++ N ++N LC++G +  A +LL
Sbjct: 330 NGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLL 389

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+    +P+  T+ TLMDG C  G ++   E+   M   G + DD ++  LI+G C++
Sbjct: 390 NEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRD 449

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             V +A  +  ++   G KP   TY  +     +    +   KL  EMQ +       TY
Sbjct: 450 GRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTY 509

Query: 371 RTFIDGLCVRPQVR 384
              ++G C + Q++
Sbjct: 510 NALMNGFCKQGQMK 523



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 108/201 (53%)

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E +L++      PNV  +  L+HGFC   D   A+ +  E+  +G++P+VVS N +++  
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C++  ++    L  +M    + P+ FTY+ L++G C   ++     LF  M  MG   + 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            ++  LI+G CK+ +++ AL  +  +  +GI+P ++TYN L +GL      + A KL  E
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M GN    D  T+ T +DG C
Sbjct: 392 MIGNGFKPDKITFTTLMDGCC 412



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%)

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E ++ +   G   + + +NIL++G+CK  +V  A  +++E+  +G++P+VV++NTL  G 
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              +  E    L   M+   ++ D  TY   I+GLC   +V 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVE 313


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 191/379 (50%), Gaps = 11/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +    LF+ +   G+ PD+YTY+ L++ FCK+G +      
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   APNVVT+T+LI       ++  A  +F  + + GC PN++TY  LI+G C+
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 129 TGHTIVALNLFKEMTNGNGEI---GVVFK--------PNTVTYSIIIDGLCKEGFVDKAK 177
            G T  A  ++  M N   +I    + F+        PN VTY  ++DGLCK   V +A+
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN + Y +LI GFC     +EA+ +  +M+  G  PNV + + ++++L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K+ ++D A ++L  M++    PN   Y  ++DG C  GK +    L + ME  GC  + 
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ K   V+  L L   +  KG  P  +TY  L +        + A KL  E
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479

Query: 358 MQGNDVAADTCTYRTFIDG 376
           M+          YR  I+G
Sbjct: 480 MKQTYWPKHIGMYRKVIEG 498



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 189/385 (49%), Gaps = 26/385 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F   L C+ K   ++   ++ + + S G  PD  TYS +I   C   +V   F +F 
Sbjct: 90  VCNFTRCLCCIGK---FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQ 146

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R+   P+V T+T+L+   C    I +A   F +++  GC PNV+TY  LI+   +T 
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN- 189
               A  +F EM   NG +     PN VTY+ +IDG CK G  +KA +++ +MK + ++ 
Sbjct: 207 KLSRANEIF-EMMLSNGCV-----PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDI 260

Query: 190 ----------------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                           PNVVTY +L+ G C A+   EA+ LL  M  +G +PN +  + +
Sbjct: 261 PDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDAL 320

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  CK GK+D A  +   M+     PN +TY++L+D      +++   ++   M    C
Sbjct: 321 IDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSC 380

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +   Y  +++G CK  + +EA  L   +  KG  P VVTY  +  G  +  + +R L+
Sbjct: 381 APNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE 440

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L   M     A +  TYR  I+  C
Sbjct: 441 LLQLMTSKGCAPNFITYRVLINHCC 465



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 179/396 (45%), Gaps = 64/396 (16%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC-------- 92
           G +P    ++ L++ +C+ G     + +  +++   + P  V +  LI G+C        
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 93  --------AESRIVEAAALFTKL----------------KAF---------GCEPNVITY 119
                   A + ++E   +  K+                KA+         G  P+  TY
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           + +I  LC       A  LF+EM   NG       P+  TY+ ++D  CK G +++A+  
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKR-NG-----ITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +M+ +   PNVVTYT+LIH +      + A  +   M+  G  PN+V+   +++  CK
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 240 NGKMDNASRLLDLMVQCDV-----------------RPNAFTYNTLMDGFCLTGKINRVK 282
            G+ + A ++   M    V                  PN  TY  L+DG C   K+   +
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +L  +M   GC+ +   Y+ LI+G+CK  +++EA  ++ ++   G  P V TY++L   L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           F+ ++ + ALK+  +M  N  A +   Y   +DGLC
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 184/423 (43%), Gaps = 65/423 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K +       +F+ + S G  P++ TY+ LI+  CK G+      I
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249

Query: 69  FGR-----------------ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           + R                 +      PNVVT+ +L+ GLC   ++ EA  L   +   G
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG----------EIGVVFK------- 154
           CEPN I Y+ LI+G C+ G    A  +F +M  G+G           I  +FK       
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKML-GHGCSPNVYTYSSLIDKLFKDKRLDLA 368

Query: 155 -------------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                        PN V Y+ ++DGLCK G  D+A  L L M+ +   PNVVTYT++I G
Sbjct: 369 LKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDG 428

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F  A   +    LL  M  +G  PN ++  V++N  C  G +D+A +LL+ M Q     +
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKH 488

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS------YNILINGYCKNKEVEE 315
              Y  +++GF          E   S+  +    +D S      Y +LI+ + K   +E 
Sbjct: 489 IGMYRKVIEGFS--------HEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEM 540

Query: 316 ALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           AL L+ EL  F        TY +L   L    + ++A KL+ +M       +       I
Sbjct: 541 ALELHEELSSFSAAYQN--TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLI 598

Query: 375 DGL 377
            GL
Sbjct: 599 KGL 601



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 35/300 (11%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           GC P+ + +N+L++  CR+G    A  L K+M      +   ++P  V Y+I+I G+C  
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKM------VICGYQPGYVVYNILIGGICST 59

Query: 171 ---------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                    G  ++A    L+M       NV  +T  +   C    + +A  ++ EM+ +
Sbjct: 60  EDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCL---CCIGKFEKAYNVIREMMSK 116

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P+  + + ++  LC   K++ A +L   M +  + P+ +TY TL+D FC  G I + 
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +  F  M+  GC  +  +Y  LI+ Y K +++  A  ++  +   G  P +VTY  L  G
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236

Query: 342 LFEIRQAERALKLFVEMQGNDV-----------------AADTCTYRTFIDGLCVRPQVR 384
             +  + E+A +++  M+ + V                   +  TY   +DGLC   +V+
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 44/255 (17%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-- 240
           M  E   P+ + + SL+H +C + D+  A  LL +MV  G QP  V  N+++  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 241 ---------------------------------------GKMDNASRLLDLMVQCDVRPN 261
                                                  GK + A  ++  M+     P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + TY+ ++   C   K+ +  +LF  M+  G   D ++Y  L++ +CK   +E+A + ++
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
           E+   G  P VVTY  L H   + R+  RA ++F  M  N    +  TY   IDG C   
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 382 QVRFT---YARRKGN 393
           +       YAR K +
Sbjct: 242 ETEKACQIYARMKND 256



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 48/321 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++ L+  L K+K  D  L +  ++      P++  Y+ +++  CK+G+   
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     R+     L   + + GC PN ITY  LIN
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLIN 462

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             C  G                                          +D A +L  +MK
Sbjct: 463 HCCAAG-----------------------------------------LLDDAHKLLEEMK 481

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                 ++  Y  +I GF H  ++  + GLL E+ + G  P +    ++++   K G+++
Sbjct: 482 QTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLE 539

Query: 245 NASRLLDLMVQCDVRPNAF--TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            A   L+L  +      A+  TY +L++   L  K+++  +L+  M   G   +      
Sbjct: 540 MA---LELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVC 596

Query: 303 LINGYCKNKEVEEALSLYNEL 323
           LI G  +  + EEAL L + +
Sbjct: 597 LIKGLLRVGKWEEALQLSDSI 617



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 41/168 (24%)

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M+     P+   +N+L+  +C +G      +L   M   G +     YNILI G C  +
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 312 EV-----------------------------------------EEALSLYNELPFKGIKP 330
           ++                                         E+A ++  E+  KG  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              TY+ +   L    + E+A +LF EM+ N +  D  TY T +D  C
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFC 168


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FN +L  L +        +L  ++   G+  + +T +I I   C+ G++     +
Sbjct: 113 PDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               + +  AP+VVT+ +L++GLC +S++ EAA    ++   GC P+  TYNT+I+G C+
Sbjct: 173 V-ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L K+       I   F P+ VTY  +I+GLC EG V++A ELF + + ++L
Sbjct: 232 RDMLQEATELLKD------AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDL 285

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V Y SL+ G C       A  ++ EMV+ G  P++ + N+++N LCK G + +A+ 
Sbjct: 286 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++  +     P+ FT+NT++DG+C   K++   +L   M   G   D  +YN ++NG C
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +E    + E+  KG +P  +TYN L     +I Q E A  + V M  + +  DT 
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 369 TYRTFIDGLC 378
           ++ T I G C
Sbjct: 466 SFNTLIHGFC 475



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 187/379 (49%), Gaps = 6/379 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K+          +R+ + G  PD +TY+ +I+ +CK   +     +
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+ VT+ SLI GLCAE  +  A  LF + +A   +P+++ YN+L+ GLCR
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM            P+  TY+I+I+GLCK G +  A  +      +  
Sbjct: 302 QGLILHALQVMNEMVEDGCH------PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ ++I G+C     + A  L+  M   G+ P+ ++ N ++N LCK GK    + 
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M+    RPNA TYN L++ FC   ++     + V M   G   D  S+N LI+G+C
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N +++ A  L+ +L  KG   T  T+N L          + A K+F EM       D  
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535

Query: 369 TYRTFIDGLCVRPQVRFTY 387
           TYR  +DG C    V   Y
Sbjct: 536 TYRVLVDGSCKAANVDRAY 554



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 191/406 (47%), Gaps = 42/406 (10%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ--VSLG 65
           PP   ++N ++  L    ++D    ++ R+ S G+ PD  T+++ I  FC  G+  V+L 
Sbjct: 7   PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66

Query: 66  FV---------------------------------IFGRILRSCFAPNVVTFTSLIKGLC 92
            +                                 +F  +LR    P+V TF +++  LC
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            +  I+E+ AL  K+   G   N  T N  I GLC  G    A+ L + M          
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-------AY 179

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+ VTY+ ++ GLCK+  V +A +   +M  +   P+  TY ++I G+C  +   EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL + + +G  P+ V+   ++N LC  G ++ A  L +     D++P+   YN+L+ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G I    ++   M   GC  D ++YNI+ING CK   + +A  + N+   KG  P V
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            T+NT+  G  +  + + AL+L   M    +A D  TY + ++GLC
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 162/342 (47%), Gaps = 7/342 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           ++  G  P    Y+ +++             ++ R+L +  AP+  T T  IK  C   R
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
              A  L   L   GC+   + Y T++ GL   GH   A +LF EM   +     VF P+
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD-----VF-PD 114

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T++ ++  LC++G + ++  L  ++    ++ N  T    I G C      EA   L+
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA-LV 173

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           E +D  + P+VV+ N +M  LCK+ K+  A++ L  M+     P+ FTYNT++DG+C   
Sbjct: 174 ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +    EL       G   D  +Y  LING C   +VE AL L+NE   K +KP +V YN
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L  GL        AL++  EM  +    D  TY   I+GLC
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC 335



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 6/325 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L +       L +   +   G  PD++TY+I+IN  CKMG +S   V+
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV 346

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF ++I G C   ++  A  L  ++  +G  P+ ITYN+++NGLC+
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        F+EM      I    +PN +TY+I+I+  CK   +++A  + ++M  + L
Sbjct: 407 AGKAKEVNETFEEM------ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +++ +LIHGFC   D + A  L  ++ ++G      + N+++        M  A +
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+    +P+ +TY  L+DG C    ++R       M S G      ++  ++N   
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580

Query: 309 KNKEVEEALSLYNELPFKGIKPTVV 333
            N  V EA+++ + +   G+ P VV
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P    Y+ I+D L    + D+A +++++M    + P+  T+T  I  FC     + A  L
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L  + ++G     ++   ++  L  +G   +A  L D M++ DV P+  T+N ++   C 
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G I     L   +   G   + F+ NI I G C+   +EEA++L   +    I P VVT
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVT 186

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           YNTL  GL +  + + A +    M       D  TY T IDG C R  ++
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 18/252 (7%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M+   P   ++N +L  L K      V   F+ +   G  P+  TY+ILI  FCK+ Q+ 
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +  R+ +    P+ ++F +LI G C    +  A  LF KL   G      T+N LI
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                  +  +A  +F EM +        +KP+  TY +++DG CK   VD+A     +M
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKG------YKPDLYTYRVLVDGSCKAANVDRAYVHLAEM 560

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS------------N 231
             +   P++ T+  +++     +  +EA  ++  MV  GV P VV +             
Sbjct: 561 VSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPK 620

Query: 232 VIMNELCKNGKM 243
           +++ EL K G +
Sbjct: 621 ILVEELMKKGHI 632


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 200/381 (52%), Gaps = 7/381 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF  L+    ++   + V +L   +   G   D  T ++++  FC+ G+      +
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L     PNVV +T+ I GLC  + + +A  +  ++ A G +PNV T+ +LINGLC+
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCK 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  LF ++   +      +KPN  TY+++I G CKEG + +A+ L  +M  + L
Sbjct: 303 IGWTERAFRLFLKLIKSSS-----YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+LI G C    +N A  L+ +M  +G QPN+ + N +++ LCK GK+  A +
Sbjct: 358 APNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYK 417

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +     ++ +  TY  ++   C  G I    +LF  M   GC  D  +Y  LI  YC
Sbjct: 418 VLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYC 477

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + +++EE+  L+++     + PT  TY ++  G  ++ ++  AL++F  M  N   AD+ 
Sbjct: 478 QQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSI 537

Query: 369 TYRTFIDGLCVRPQVRFTYAR 389
           TY   I GLC   + R   AR
Sbjct: 538 TYGALISGLC--KESRLEEAR 556



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 175/347 (50%), Gaps = 10/347 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP V ++   +  L K  +      + + + + GL P++YT++ LIN  CK+G     F
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310

Query: 67  VIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            +F ++++S  + PNV T+T +I G C E ++  A  L  ++   G  PN  TY TLI+G
Sbjct: 311 RLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISG 370

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A  L  +M          F+PN  TY+ +IDGLCK+G + +A ++      
Sbjct: 371 HCKEGSFNCAFELMNKMRREG------FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANN 424

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L  + VTYT +I   C       A  L   M + G  P++ +   ++   C+  +M+ 
Sbjct: 425 QGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEE 484

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           + +L D  +  ++ P   TY +++ G+C  GK      +F  M   GC+ D  +Y  LI+
Sbjct: 485 SQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALIS 544

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           G CK   +EEA +LY  +  K + P  VT  TL    FE  + E+A+
Sbjct: 545 GLCKESRLEEARALYEGMLDKRLVPCEVTPVTL---AFEYCRREKAV 588



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 140/345 (40%), Gaps = 38/345 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++G   K         L  R+   GL P+  TY+ LI+  CK G  +  F +
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFEL 383

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ R  F PN+ T+ +LI GLC + +I EA  +       G + + +TY  +I   C+
Sbjct: 384 MNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCK 443

Query: 129 TGHTIVALNLFKEMT-NG----------------------------NGEIGVVFKPNTVT 159
            GH   AL+LF  M  NG                            +  + +   P   T
Sbjct: 444 QGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQT 503

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I G CK G    A  +F +M       + +TY +LI G C  +   EA+ L   M+
Sbjct: 504 YTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGML 563

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D+ + P  V+   +  E C+  K   A  +LD +   D R    T N L+      G + 
Sbjct: 564 DKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRL---DKRRKNHTVNVLVRKLSAIGHVE 620

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNK------EVEEALS 318
                      +    D  +Y   IN    NK      E+ E +S
Sbjct: 621 DASLFLKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKIS 665



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/354 (22%), Positives = 149/354 (42%), Gaps = 27/354 (7%)

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI---NGLC 127
           R+L     P   + T+         R+ +AA+  +   A   +P  +  +  I   + L 
Sbjct: 10  RLLNYLSKPQHFSTTTATFSAPPPPRVSDAASHVSSPGAVDTDPGALAPDDAIVALSSLA 69

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID----------------GLCKEG 171
            +  +  AL LF+ + +   ++  + +      +  +D                   + G
Sbjct: 70  DSAGSAAALELFRRLAS-RQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAEAG 128

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSS 230
            + +A ++  +M+   L   V T   ++        +  A+ +   MV +G + P+  S 
Sbjct: 129 RLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSF 188

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             ++   C++G+M+    LL +M       +  T   ++  FC  G+   V ELF  M  
Sbjct: 189 RALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLE 248

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           MG   +  +Y   I+G CK   V++A  +  E+  KG+KP V T+ +L +GL +I   ER
Sbjct: 249 MGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTER 308

Query: 351 ALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGNTN 398
           A +LF+++ + +    +  TY   I G C      R ++       +G + NTN
Sbjct: 309 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 362



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 133/368 (36%), Gaps = 63/368 (17%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYT-YSILINCFCKMGQVSLGFVIFGRILR 74
           + L  LA +      L LF+RL S      L   Y      F   G + +      R   
Sbjct: 63  VALSSLADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRR--- 119

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
                       ++       R+ EAA +  ++++ G    V T N ++     TG    
Sbjct: 120 ------------MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAY 167

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  +F                         DG+   G                L P+  +
Sbjct: 168 ARKVF-------------------------DGMVTRG---------------GLLPDARS 187

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           + +LI G C      E   LL  M  QG   +  +  VI+   C+ G+  + S L   M+
Sbjct: 188 FRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRML 247

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNILINGYCKNK 311
           +    PN   Y   +DG C   K   VK+ F  +E M   G K + +++  LING CK  
Sbjct: 248 EMGTPPNVVNYTAWIDGLC---KRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIG 304

Query: 312 EVEEALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             E A  L+ +L      KP V TY  +  G  +  +  RA  L   M    +A +T TY
Sbjct: 305 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 364

Query: 371 RTFIDGLC 378
            T I G C
Sbjct: 365 TTLISGHC 372


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 192/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L +  H    L +   +   G   D+YTY+ LI+  CK+G++     I
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN VT+ +LI  LC E+ +  A  L   L + G  P+V T+N+LI GLC 
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +  +A+ LF+EM     +      P+  TYSI+I+ LC E  + +A  L  +M+    
Sbjct: 420 TSNREIAMELFEEMKEKGCD------PDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NVV Y +LI G C  N   +A+ +  +M   GV  + V+ N ++N LCK+ +++ A++
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   ++P+ FTY T++  FC  G I R  ++  +M   GC+ D  +Y  LI G C
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V+ A  L   +  KG+  T   YN +   L + ++ + A++LF EM       D  
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVI 653

Query: 369 TYRTFIDGLC 378
           TY+    GLC
Sbjct: 654 TYKIVFRGLC 663



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 8/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ L  L K      V +L  ++ +  + PD+ T++ILI   CK  Q+    ++
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  TFT+L++G   E+ +  A  +   +   GCE   ++ N L+NGLC+
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL    E      E G  F P+ VT++ +++GLC+ G + +  E+   M  +  
Sbjct: 282 EGRIEEALRFIYE------EEG--FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V TY SLI G C   + +EA  +L  MV +  +PN V+ N ++  LCK   ++ A+ 
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  ++    V P+  T+N+L+ G CLT       ELF  M+  GC  D+F+Y+ILI   C
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC 453

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + ++EAL L  E+   G    VV YNTL  GL +  +   A  +F +M+   V+  + 
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513

Query: 369 TYRTFIDGLCVRPQVR 384
           TY T I+GLC   +V 
Sbjct: 514 TYNTLINGLCKSKRVE 529



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 189/400 (47%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP VS+FNIL+  L K       + + + + + GL PD  T++ L+  F +   V     
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   ++ S      V+   L+ GLC E RI EA     + + F C P+ +T+N L+NGLC
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGF-C-PDQVTFNALVNGLC 313

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTV 158
           RTGH    L +   M     E+ V                               +PNTV
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+ +I  LCKE  V+ A EL   +  + + P+V T+ SLI G C  ++   A  L  EM
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            ++G  P+  + ++++  LC   ++  A  LL  M       N   YNTL+DG C   ++
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +++F  ME +G      +YN LING CK+K VEEA  L +++  +G+KP   TY T+
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                +    +RA  +   M  N    D  TY T I GLC
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N+L+  L K    +  L         G  PD  T++ L+N  C+ G +  G  +   +
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L   F  +V T+ SLI GLC    I EA  +   + +  CEPN +TYNTLI  LC+  H 
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV 388

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L + +T+     GV+  P+  T++ +I GLC     + A ELF +MK +  +P+ 
Sbjct: 389 EAATELARVLTSK----GVL--PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY+ LI   C      EA  LL EM   G   NVV  N +++ LCKN ++ +A  + D 
Sbjct: 443 FTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQ 502

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    V  ++ TYNTL++G C + ++    +L   M   G K D F+Y  ++  +C+  +
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A  +   +   G +P +VTY TL  GL +  + + A KL   +Q   +      Y  
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622

Query: 373 FIDGLCVRPQVR 384
            I  LC R + +
Sbjct: 623 VIQALCKRKRTK 634



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 182/369 (49%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+G L K  H +    L + L S G+ PD+ T++ LI   C      +   +
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T++ LI+ LC+E R+ EA  L  +++  GC  NV+ YNTLI+GLC+
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F +M      +GV    ++VTY+ +I+GLCK   V++A +L  QM  E L
Sbjct: 490 NNRVGDAEDIFDQMEM----LGV--SRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+++  FC   D   A  ++  M   G +P++V+   ++  LCK G++D AS+
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  +    +      YN ++   C   +      LF  M   G   D  +Y I+  G C
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663

Query: 309 KNK-EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL--FVEMQGNDVAA 365
                ++EA+    E+  KGI P   ++  L  GL  +   +  ++L   V  +G    +
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQS 723

Query: 366 DTCTYRTFI 374
           +T   R F+
Sbjct: 724 ETSIIRGFL 732



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 23/288 (7%)

Query: 100 AAALFTKLKA---FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           A +LF    A   +   P+V  ++ L+  L R G     L L ++M +    +      +
Sbjct: 75  ALSLFQWASAQPNYSAHPSV--FHELLRQLARAGSFDSMLTLLRQMHSSKIPV------D 126

Query: 157 TVTYSIIIDGLCKEGFVD-KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGL 214
             T+ I ++       +  +   LFL M+ +  + P+   Y   +     AN     + L
Sbjct: 127 ESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETL 186

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +MV   V P+V + N+++  LCK  ++  A  +L+ M    +RP+  T+ TLM GF  
Sbjct: 187 HSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIE 246

Query: 275 TGKIN---RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS-LYNELPFKGIKP 330
              +    R+KEL V     GC+    S N+L+NG CK   +EEAL  +Y E   +G  P
Sbjct: 247 EADVEGALRIKELMVES---GCELTSVSVNVLVNGLCKEGRIEEALRFIYEE---EGFCP 300

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             VT+N L +GL      ++ L++   M       D  TY + I GLC
Sbjct: 301 DQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 169/331 (51%), Gaps = 6/331 (1%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           +Y+ L+    K G+    +  +  +L +   PN  T+  L++ LC   R  EA ++F  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A GC PNV +Y+ LI GLCR      A  L  EM +G        +PN VTY  ++ GL
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG------HQPNVVTYGSLLSGL 132

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           CK G + +A +LF +M Y    P+ V Y  LI GF    D  EA  L  EM+++G  P V
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
            + N +++   + G+      L   M++    PN FT+N L+DGFC  G +     LF+ 
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S+GC  D  SYN LI G C   +  EA  L  E+   G+ P +V+YN L  G  +   
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + A+KLF E+  + +  D  +Y T ID LC
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 190/369 (51%), Gaps = 12/369 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N LL  LAK+   D V   +  + + G  P+ YTY  L+   C+  +      +F  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNV +++ LI GLC   ++ EAA L  ++   G +PNV+TY +L++GLC+ G  
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 133 IVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
             A++LF  M         V++   P+ V Y+++IDG  K+G + +A  LF +M  +   
Sbjct: 139 KEAVDLFSRM---------VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P V TY SL+ GF    ++   + L  +M+ QG  PN+ + N +++  CK G M  A RL
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M      P+  +YNTL+ G C  GK +  + L   M   G   D  SYNILI+GY K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  ++ A+ L+ E+P  G++P   +Y+T+   L    +   A  +F +M  N  A D   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 370 YRTFIDGLC 378
               + GLC
Sbjct: 370 VIPLVIGLC 378



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 202/398 (50%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L + + ++   S+F+ + + G  P++++YSILI   C+  +V     +
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ SL+ GLC   ++ EA  LF+++   GC P+ + YN LI+G  +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 129 TGHTIVALNLFKEMT------------------NGNGEIGVV---FK--------PNTVT 159
            G    A  LF+EM                   +  GE G V   FK        PN  T
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ ++DG CK G + +A  LFL+M+     P+VV+Y +LI G C     +EA+ LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV P++VS N++++   K+G +D+A +L   + +  + P+AF+Y+T++D  C  GK+ 
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +F  M + G   D      L+ G C+ + + E+  L+  +      P +  YN L 
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + L + ++++   ++F E+     + D    +  ++ L
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 149/297 (50%), Gaps = 6/297 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
             +++  L++ L    R       +  + A GC PN  TY  L+  LC+      A ++F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           + M            PN  +YSI+I GLC+   VD+A EL  +M      PNVVTY SL+
Sbjct: 76  RGMAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G C      EA  L   MV +G  P+ V  NV+++   K G M  A RL + M++    
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P  FTYN+L+ GF   G+  RV+ LF  M   GC  + F++N L++G+CK  ++ EA  L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + E+   G  P VV+YNTL  G+    +   A +L  EM  + V  D  +Y   IDG
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 6/289 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    +N+L+   +K         LF+ +   G  P ++TY+ L++ F + G+      
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +LR    PN+ TF +L+ G C    +VEA  LF ++++ GC P+V++YNTLI G+C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L +EM            P+ V+Y+I+IDG  K G +D A +LF ++    
Sbjct: 274 SKGKPHEAQRLLREMIRSG------VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  +Y+++I   C A     A  +  +M+  G  P+      ++  LC+  ++  + 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            L   MV+ +  P    YN LM   C   + + V E+F  +   G   D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 114/228 (50%)

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V +   T++Y+ +++ L K G  D     +  M      PN  TY  L+   C A  + E
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ +   M  QG  PNV S ++++  LC+  K+D A+ LL+ M+    +PN  TY +L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C  GK+    +LF  M   GC  D   YN+LI+G+ K  ++ EA  L+ E+  KG  P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TV TYN+L  G     +  R   LF +M       +  T+   +DG C
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 29/233 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN LL    K         LF  + S+G  PD+ +Y+ LI   C  G+      +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++RS   P++V++  LI G      +  A  LF ++   G EP+  +Y+T+I+ LCR
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTV----------------------------T 159
            G    A  +FK+M  NG+     V  P  +                             
Sbjct: 345 AGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPE 404

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           Y++++  LCK    D   E+F ++     +P+V     ++     ++D + A+
Sbjct: 405 YNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 204/400 (51%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N ++  L K +  D   +  +++ +  + P+ +TY+ LI  +   GQ      
Sbjct: 264 PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVR 323

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVT + L+  LC   +I EA  +F  +   G  P+V +YN ++NG  
Sbjct: 324 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 383

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 384 TKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 443 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 502

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G+  ++V  + I+N LCK G++ +A  + DL V   + P+A  Y+ LMDG+CL GK
Sbjct: 503 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 562

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  +GIKP+ + Y+ 
Sbjct: 563 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 622

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLF+  +   A   F EM  + +A D CTY   + GL
Sbjct: 623 IIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    N++  
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 162

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             L++G C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M 
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 222

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  PN V Y+ +IDG  KEG V+KA +LF +M    + P++VTY S++H  C
Sbjct: 223 EG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 278

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++ V PN  + N ++      G+   A R+   M +  + P+  
Sbjct: 279 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 338

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T + LM   C  GKI   +++F +M   G   D FSYNI++NGY     + +   L++ +
Sbjct: 339 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P   T+N L          ++A+ +F EM+ + V  D  TYRT I  LC
Sbjct: 399 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+NI+L   A       +  LF  +   G+ PD YT+++LI  +   G + 
Sbjct: 365 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 424

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   YN LI
Sbjct: 425 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +S II+ LCK G V  A+ +F   
Sbjct: 485 QGFCTHGSLLKAKELISEIMNNGMHLDIVF------FSSIINNLCKLGRVMDAQNIFDLT 538

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+ V Y+ L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 598

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   Y+ ++DG    G+    K  F  M   G   D  +YNI+
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIV 658

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 659 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 718

Query: 364 AADTCTYRTFIDGL 377
             +  TY   I  L
Sbjct: 719 VPNVVTYSIMITNL 732



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 85/452 (18%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S++ILL  L    K+   D +L +     ++   P++  Y+ +I+ 
Sbjct: 183 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDG 241

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT+ S++  LC    + +A A   ++      PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT S+++  LCK G + +
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKIKE 355

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +Y  +++G+                                 
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK----------- 294
           + + YN L+ GFC  G + + KEL   + + G               CK           
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535

Query: 295 ---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                     D   Y++L++GYC   ++E+AL +++ +   GI+P VV Y TL +G  +I
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 595

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +  L LF EM    +   T  Y   IDGL
Sbjct: 596 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 179/390 (45%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y+ LI  FC  G +  
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 495

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F+S+I  LC   R+++A  +F      G  P+ + Y+ L++
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIGRIDEGLSLFREML 609

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+ + Y+ +I G   A     AK    EM + G+  ++ + N+++  L KN   D
Sbjct: 610 QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ N  T NT++DG   T ++   K+LF S+       +  +Y+I+I
Sbjct: 670 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMI 729

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 730 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 789

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R Q+RF  A+
Sbjct: 790 LEHLTAMLLVDLFSSKGTC-REQIRFLPAK 818



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 156

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            N +  + +++G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 157 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    PNVV+ N +++   K G ++ A  L   MVQ  + P+  TYN+++  
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M +     ++++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT + L   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 385


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 189/344 (54%), Gaps = 6/344 (1%)

Query: 35  KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAE 94
           K L   GL PDL TY++LI   C+MG +     +   +L S F  NV+ ++ L+  LC  
Sbjct: 280 KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
            ++ EA  L  +++A   +P+++TY+ LI+GLC+ G    A+ L+KEM         +F 
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC-----FNRIF- 393

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN+  +S I+ GLC++G +  A+  F  +   NL P+V  Y  +I G+    D  EA  L
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRL 453

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              + D+ + P++V+ N ++   CKN K+  A RLL+ +    + P+A TY TLM+ +C 
Sbjct: 454 YKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCE 513

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G IN++ EL + M     +    +Y ++I G CK +++EE++ L  ++  KG+ P  +T
Sbjct: 514 EGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQIT 573

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           YNT+     + +   +A +L  +M  +++     TY   IDGLC
Sbjct: 574 YNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 183/372 (49%), Gaps = 7/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            P V SFN ++    K    D   S F  +   G+ PD Y+Y+ILI+     G +     
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGL 126
           +   + +    P++VT+  + KG      +  A  +  K L   G +P+++TY  LI G 
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGH 301

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G+   AL L +++ +        F+ N + YS+++  LCK G VD+A +L  +M+  
Sbjct: 302 CQMGNIEEALRLRRDLLSSG------FQLNVILYSVLLSSLCKRGQVDEALQLLYEMEAN 355

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           NL P++VTY+ LIHG C      +A  L  EM    + PN  + + I+  LC+ G + +A
Sbjct: 356 NLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDA 415

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
               D ++  ++RP+   YN ++DG+   G +     L+  +          ++N LI G
Sbjct: 416 RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CKN++V EA  L   +   G++P+ VTY TL +   E     +  +L +EM   D+   
Sbjct: 476 FCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT 535

Query: 367 TCTYRTFIDGLC 378
             TY   I GLC
Sbjct: 536 VVTYTVVIKGLC 547



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++LL  L K    D  L L   + +  L PDL TYSILI+  CK G+V     ++  + 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +   PN    + ++KGLC +  + +A   F  L      P+V  YN +I+G  + G   
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+ L+K + +          P+ VT++ +I G CK   V +A+ L   +K   L P+ V
Sbjct: 449 EAVRLYKRLRDK------AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+L++ +C   + N+   LL+EM  + ++P VV+  V++  LCK  K++ + +LL+ M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+  TYNT++  FC    + +  EL   M     +    +YN+LI+G C+  +V
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  +   L  + I  T V Y T+         A+RA+K+F +M           Y   
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682

Query: 374 IDGLCVR 380
           I+ LC R
Sbjct: 683 INRLCKR 689



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 45/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L   +H D +  ++  +   G      T SI+++  C   +     + 
Sbjct: 116 PSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +     FAP+VV+F +++   C       A + F  +  +G  P+  +YN LI+GL  
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
            G    AL    E+TN   + G+  +P+ VTY I+  G    G +  A+E+  +M   E 
Sbjct: 233 AGSMEEAL----ELTNDMEKQGL--QPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG 286

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P++VTYT LI G C   +  EA  L  +++  G Q NV+  +V+++ LCK G++D A 
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL 346

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM------------------- 288
           +LL  M   +++P+  TY+ L+ G C  GK+ +  +L+  M                   
Sbjct: 347 QLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406

Query: 289 -------------ESM---GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                        +S+     + D   YNI+I+GY K  +VEEA+ LY  L  K I P++
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VT+N+L +G  + R+   A +L   ++ + +     TY T ++  C
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC 512



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 167/351 (47%), Gaps = 7/351 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   +   IL G   K    D  +  F  L    L PD+  Y+I+I+ + K+G V     
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARM-YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVR 452

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R+      P++VTF SLI G C   ++VEA  L   +K  G EP+ +TY TL+N  C
Sbjct: 453 LYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC 512

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G+      L  EM   + E      P  VTY+++I GLCK+  ++++ +L   M+ + 
Sbjct: 513 EEGNINKLHELLLEMNLKDIE------PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +TY ++I  FC A D  +A  LL +M+   ++P   + NV+++ LC+ G +++A 
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  +   ++      Y T++   C+ G   R  ++F  M   G +     Y+ +IN  
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           CK   + EA   +  +   G+ P    +  + +            +L   M
Sbjct: 687 CKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 142/288 (49%), Gaps = 6/288 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+    KN+       L + +   GL P   TY+ L+N +C+ G ++    +
Sbjct: 464 PSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHEL 523

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P VVT+T +IKGLC + ++ E+  L   ++A G  P+ ITYNT+I   C+
Sbjct: 524 LLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCK 583

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  +M   N E      P   TY+++IDGLC+ G V+ A  + + ++  N+
Sbjct: 584 AKDMRKAFELLDDMLIHNLE------PTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N   V YT++I   C   D   A  +  +MV++G + ++   + ++N LCK   ++ A  
Sbjct: 638 NLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKY 697

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
              +M+   V P+   +  +++ F   G ++ V EL   M   G  HD
Sbjct: 698 YFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 13/293 (4%)

Query: 95  SRIV-EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           SR+V +A  +  K+K     P++ TYN+L+  L    HT +  +++ ++ +         
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSG------- 145

Query: 154 KPNTV-TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            P +  T SII+DGLC +     A     Q   +   P+VV++ +++  +C     + AK
Sbjct: 146 TPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAK 205

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                M+  G+ P+  S N++++ L   G M+ A  L + M +  ++P+  TY  +  GF
Sbjct: 206 SFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF 265

Query: 273 CLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            L G ++  +E+   M    G K D  +Y +LI G+C+   +EEAL L  +L   G +  
Sbjct: 266 HLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           V+ Y+ L   L +  Q + AL+L  EM+ N++  D  TY   I GLC + +V+
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQ 378



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 10/223 (4%)

Query: 162 IIIDGLCKEG----FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLI 216
           +++D + +E      V  A  + ++MK +NL P++ TY SL++   H +  W+    +  
Sbjct: 84  LVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWD----VYN 139

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           ++ D G   +  +S++I++ LC   +  +A   L      +  P+  ++NT+M  +C  G
Sbjct: 140 DIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLG 199

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
             +  K  F  M   G   D +SYNILI+G      +EEAL L N++  +G++P +VTY 
Sbjct: 200 LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYK 259

Query: 337 TLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRTFIDGLC 378
            +  G   +     A ++  +M  ++ +  D  TY   I G C
Sbjct: 260 IVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 198/375 (52%), Gaps = 12/375 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI---GLFPDLYTYSILINCFCKMGQVS 63
           SP  VS   +++ C    +    VL   K LN++   G   D  T +++I+ FC+ G V+
Sbjct: 221 SPDCVSFKLMVVACCNMGR----VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVN 276

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
                F +++    APNV+ FT+LI GLC +  I +A  L  ++   G +PNV T+ TLI
Sbjct: 277 RVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GLC+ G T  A  LF ++   +G     +KPN  TY+ +I+G CKE  +++A+ L  +M
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDG-----YKPNVHTYTAMINGYCKEDKLNRAEMLLSRM 391

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           + + L PN  TYT+LI G C   ++  A  L+  M  +G  PN+ + N I++ LCK G +
Sbjct: 392 QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A RLL+ +    ++ +  TY  LM   C     NR    F  M  +G   D  SY  L
Sbjct: 452 DEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTL 511

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+ +C+ K+++E+  L+ E    G+ PT  TY ++  G         A+KLF  M  +  
Sbjct: 512 ISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571

Query: 364 AADTCTYRTFIDGLC 378
           A D+ TY   I GLC
Sbjct: 572 APDSITYGALISGLC 586



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 175/331 (52%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L K         L + +   G  P++YT++ LI+  CK G     F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+T++I G C E ++  A  L ++++  G  PN  TY TLI+G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + A  L   M    G+ G  F PN  TY+ IIDGLCK+G +D+A  L  ++    
Sbjct: 412 KVGNFVRAYELMDLM----GKEG--FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  + VTYT L+   C   D N +     +M+  G  P++ S   +++  C+  +M  + 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL +  V   + P   TY +++ G+C  G  +   +LF  M + GC  D  +Y  LI+G 
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           CK  ++++A +LY+ +  KG+ P  VT  TL
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 7/364 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           +++    +  + + V+  F ++  +GL P++  ++ LIN  CK G +   F +   ++R 
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIV 134
            + PNV T T+LI GLC +    +A  LF KL ++ G +PNV TY  +ING C+      
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  L   M     E G+V  PNT TY+ +IDG CK G   +A EL   M  E  +PN+ T
Sbjct: 384 AEMLLSRMQ----EQGLV--PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I G C     +EA  LL ++   G+Q + V+  ++M+  C+    + +    + M+
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +    P+  +Y TL+  FC   ++   + LF    S+G      +Y  +I GYC+     
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A+ L+  +   G  P  +TY  L  GL +  + + A  L+  M    ++    T  T  
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 375 DGLC 378
              C
Sbjct: 618 YEYC 621



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 177/366 (48%), Gaps = 11/366 (3%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNV 81
           A+N      +++   + + GL     T + +++    MG V +   +F  + +   +P+ 
Sbjct: 165 AENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDC 224

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V+F  ++   C   R++EA      +   G   +  T   +I+  C+ G+    +  F +
Sbjct: 225 VSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M     E+G+   PN + ++ +I+GLCK+G + +A EL  +M      PNV T+T+LI G
Sbjct: 285 MV----EMGLA--PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDG 338

Query: 202 FCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            C      +A  L +++V   G +PNV +   ++N  CK  K++ A  LL  M +  + P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N  TY TL+DG C  G   R  EL   M   G   + ++YN +I+G CK   ++EA  L 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAE--RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N++   G++   VTY  L       RQA+  R+L  F +M       D  +Y T I   C
Sbjct: 459 NKVSVHGLQADGVTYTILMS--VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFC 516

Query: 379 VRPQVR 384
            + Q++
Sbjct: 517 RQKQMK 522



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 11/277 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K    D    L  +++  GL  D  TY+IL++  C+    +   V 
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+  F P++ ++T+LI   C + ++ E+  LF +  + G  P   TY ++I G CR
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+T +A+ LF+ M+N          P+++TY  +I GLCKE  +D A+ L+  M  + L
Sbjct: 553 YGNTSLAVKLFQRMSNHGC------APDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDNAS 247
           +P  VT  +L + +C  +D + A    I ++D+  +   + + N ++ +LC  GK+D A+
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTA----INVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAA 662

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
                ++  +   N  T    M+    + K   V EL
Sbjct: 663 LFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSEL 699



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 7/293 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           ++ EA  +  +++  G   +  T N +++     G   +A N+F EM     + GV   P
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMC----QRGV--SP 222

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V++ +++   C  G V +A++    M       +  T T +I  FC     N   G  
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +MV+ G+ PNV++   ++N LCK G +  A  LL+ MV+   +PN +T+ TL+DG C  
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           G   +   LF+ +  S G K +  +Y  +INGYCK  ++  A  L + +  +G+ P   T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           Y TL  G  ++    RA +L   M     + +  TY   IDGLC +  +   Y
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 6/194 (3%)

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ + +EM  +GV P+ VS  +++   C  G++  A + L+ MV+     +  T   ++D
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            FC  G +NRV   F  M  MG   +  ++  LING CK   +++A  L  E+  +G KP
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRTFIDGLCV-----RPQVR 384
            V T+ TL  GL +    E+A +LF+++  +D    +  TY   I+G C      R ++ 
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 385 FTYARRKGNSGNTN 398
            +  + +G   NTN
Sbjct: 388 LSRMQEQGLVPNTN 401


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 193/376 (51%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     ++    + K +   G  PD  TY+ +I   C+  +V   F++F  + R+   P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A + F ++++ GC PNV+TY  L++   ++   I A ++F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-----------KYE-- 186
             M +          PN VTYS +IDGLCK G + KA E++ ++            +E  
Sbjct: 546 HRMVDA------ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGN 599

Query: 187 ---NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               + PNVVTY +LI G C A   ++A  LL  M+  G +PN +  + +++  CK GK+
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           DNA  +   M +C   P+  TY +L+D     G+++   ++   M +  C  +  +Y  +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G  K  E+E+AL+L + +  KG  P VVTY  L  GL +  +A+ +LKLF +M     
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGC 779

Query: 364 AADTCTYRTFIDGLCV 379
           A +  TYR  I+  C 
Sbjct: 780 APNYVTYRVLINHCCA 795



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++  ++  L + K  +    LF+ +   G+ PD+YTY+ILI+ FCK G +      
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PNVVT+T+L+       ++++A  +F ++    C PN +TY+ LI+GLC+
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  +++++  T+GN E    F+        PN VTY  +IDGLCK   V  A E
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHE 629

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC     + A+ + + M   G  P+V +   +++ + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M+     PN  TY  ++DG    G+I +   L   ME  GC  +  
Sbjct: 690 KDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVV 749

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           +Y  LI+G  K  + + +L L+ ++  KG  P  VTY  L +
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 187/427 (43%), Gaps = 81/427 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  LL    K+K       +F R+     +P+  TYS LI+  CK G++     +
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++ +                  APNVVT+ +LI GLC   ++ +A  L   + A GC
Sbjct: 580 YEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC 639

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ LI+G C+ G    A  +F  MT                    +G + +  K
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ +IDGL K G ++KA  L   M+ +  +PNVVTYT+LI G  
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM---------- 253
                + +  L  +M  +G  PN V+  V++N  C  G +D A  LLD M          
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819

Query: 254 -VQCDVR----------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              C V+                      P A  Y  L+D F   G++    EL   +  
Sbjct: 820 GYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879

Query: 291 MGCKHDDFS---YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +    +  S   Y  LI   C   +VEEA +LY E+  KGI P ++ + +L  GL E+ +
Sbjct: 880 VSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK 939

Query: 348 AERALKL 354
            + AL+L
Sbjct: 940 WDEALQL 946



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 173/429 (40%), Gaps = 53/429 (12%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N+L+    ++  +D  L    RL   G  P   TY+ L+      GQV +GF +   + 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S F  +  T     + LC   R  +A  +  K + F  +  + T   +I+GL       
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEK-EDFNLDTVLCT--QMISGLMEASLFN 288

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A++    M   N  I     PN VTY  ++ G  K+      K +   M  E  NPN  
Sbjct: 289 EAMSFLHRM-RCNSCI-----PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS 342

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN------------- 240
            + SL+HG+C+A D+  A  L   M   G  P  V+ N+ +  +C               
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE 402

Query: 241 ----------------------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                                       GK + A ++L  M++    P+  TY  ++   
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ +   LF  M+  G   D ++Y ILI+ +CK   +E+A S ++E+   G  P V
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YAR 389
           VTY  L H   + +Q  +A  +F  M       +  TY   IDGLC   +++     Y +
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 390 RKGNSGNTN 398
             G SGN  
Sbjct: 583 LIGTSGNVE 591



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 181/429 (42%), Gaps = 60/429 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P   ++N L+  LA     +    + K +++ G   D  T        CK+G+ +     
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNM 261

Query: 67  ---------------VIFGRILRSCF---------------APNVVTFTSLIKGLCAESR 96
                          +I G +  S F                PNVVT+ +L+ G   + +
Sbjct: 262 LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 321

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
                 +   +   GC PN   +N+L++G C  G    A  LF  MT           P 
Sbjct: 322 FGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGS------PPG 375

Query: 157 TVTYSIIIDGLCKEG------FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            V Y+I I  +C +        +D  ++++ +M   +   N V   +     C    + +
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEK 435

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +L EM+ +G  P+  +   ++  LC+  K++ +  L   M +  V P+ +TY  L+D
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            FC  G I + +  F  M S+GC  +  +Y  L++ Y K+K++ +A  +++ +      P
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEM-------------QGND---VAADTCTYRTFI 374
             VTY+ L  GL +  + ++A +++ ++             +GND   +A +  TY   I
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615

Query: 375 DGLCVRPQV 383
           DGLC   +V
Sbjct: 616 DGLCKAQKV 624



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 5/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K    D  L LFK++NS G  P+  TY +LIN  C  G +    ++
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLL 805

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  + +  ++  +   ++G     + + +  L  ++++    P    Y  LI+   +
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L KE+   +  + +    +T  Y+ +I  LC    V++A  L+ +M  + +
Sbjct: 864 AGRLETALELHKELVEVSSSLNMT---STGMYASLIQALCLASQVEEAFTLYTEMTRKGI 920

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            P+++ + SL+ G    N W+EA  L      +GV
Sbjct: 921 VPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 202/382 (52%), Gaps = 21/382 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN L+  L K+ + D  + LF+ + S  + PD++TY+ +I+  CK G +     +
Sbjct: 95  PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAREL 154

Query: 69  FGRILRSC--FAPNVVTFTSLI-KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              ++R     AP++VT+ +LI  G+C +  + EA  +   +K  G  P+VITYN++I+ 
Sbjct: 155 LEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHA 214

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G  + A  + K M+           P+ VT++ ++DG CK G + +A E+  +M  
Sbjct: 215 LCVAGRVVEAAEILKTMS---------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           EN+ P+V+TYT L++G C       A  LL E+V QG  P+V++   +++ LCK+G+++ 
Sbjct: 266 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 325

Query: 246 ASRL---------LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           A +L         L  MV  ++ P  FTYN ++ G    G I++   L   + + G   D
Sbjct: 326 AHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 385

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YN LI+G CK   V EA  L +E+   G  P  VT  ++  GL  + + + A  L V
Sbjct: 386 VVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 445

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
           EM     A +   Y + IDGLC
Sbjct: 446 EMSRKRHAPNVVVYTSLIDGLC 467



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 195/378 (51%), Gaps = 21/378 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINC-FCKMGQVSLG 65
           P + ++N ++  L K+ + +    L + +   G    PD+ TY+ LIN   CK G V   
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEA 189

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             I   +  +  AP+V+T+ S+I  LC   R+VEAA +   LK   C P+++T+NTL++G
Sbjct: 190 LEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDG 246

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    AL + +EM   N        P+ +TY+I+++GLC+ G V  A  L  ++  
Sbjct: 247 FCKAGMLPRALEVLEEMCREN------ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEA---------KGLLIEMVDQGVQPNVVSSNVIMNE 236
           +   P+V+ YTSL+ G C + +  EA         + +L EMV   + P + + N+++  
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGG 360

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           L K+G +  A  L+  +V     P+  TYNTL+DG C   ++    +L   M S+GC  +
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
           D +   ++ G C+   V++A SL  E+  K   P VV Y +L  GL +  + + A  +  
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLD 480

Query: 357 EMQGNDVAADTCTYRTFI 374
            M+G  VA D   YR  I
Sbjct: 481 AMRGQGVALDDFAYRKLI 498



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 193/384 (50%), Gaps = 17/384 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N LL  L K+ H      ++K L   G  P+L T+ ILI   CK GQ +       
Sbjct: 27  VHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLR 86

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +     AP+V  F  LI GL  +    +A  LF  +++    P++ TYNT+I+GLC++G
Sbjct: 87  ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSG 146

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID-GLCKEGFVDKAKELFLQMKYENLN 189
           +   A  L +EM    G+      P+ VTY+ +I+ G+CK+G V++A E+   MK     
Sbjct: 147 NLEKARELLEEMIRRGGKSA----PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPA 202

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V+TY S+IH  C A    EA  +L  M      P++V+ N +++  CK G +  A  +
Sbjct: 203 PDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEV 259

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L+ M + ++ P+  TY  L++G C  G++     L   +   G   D  +Y  L++G CK
Sbjct: 260 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 319

Query: 310 NKEVEEALSLYNELPFKGI---------KPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + E+EEA  L  E+  + I          P + TYN +  GL +     +A+ L  ++  
Sbjct: 320 SGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 379

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
                D  TY T IDGLC   +VR
Sbjct: 380 RGYVPDVVTYNTLIDGLCKANRVR 403



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 171/328 (52%), Gaps = 12/328 (3%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+++Y+ L++   K G       ++  +L S  +PN+VTF  LI+G C   +   A    
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             L  F   P+V  +N LI+GL + G+   A+ LF+ M +          P+  TY+ +I
Sbjct: 86  RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR------VNPDIFTYNTVI 139

Query: 165 DGLCKEGFVDKAKELFLQM--KYENLNPNVVTYTSLIH-GFCHANDWNEAKGLLIEMVDQ 221
            GLCK G ++KA+EL  +M  +     P++VTY +LI+ G C   D  EA  +L  M   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P+V++ N I++ LC  G++  A+ +L  M  C   P+  T+NTL+DGFC  G + R 
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTM-SCS--PDLVTFNTLLDGFCKAGMLPRA 256

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            E+   M       D  +Y IL+NG C+  +V+ A  L  E+  +G  P V+ Y +L  G
Sbjct: 257 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 316

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCT 369
           L +  + E A KL  EM   ++ A+  +
Sbjct: 317 LCKSGEIEEAHKLVKEMSAREILAEMVS 344



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 173/342 (50%), Gaps = 9/342 (2%)

Query: 1   MRHMHPSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           M+   P+P  ++  +I+   C+A       V+   + L ++   PDL T++ L++ FCK 
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGR-----VVEAAEILKTMSCSPDLVTFNTLLDGFCKA 250

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G +     +   + R    P+V+T+T L+ GLC   ++  A  L  ++   G  P+VI Y
Sbjct: 251 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 310

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGN---GEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            +L++GLC++G    A  L KEM+        + +   P   TY+I++ GL K+G + KA
Sbjct: 311 TSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 370

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             L   +      P+VVTY +LI G C AN   EA  L  EM   G  PN V+   ++  
Sbjct: 371 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFG 430

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LC+ G++D+A  L+  M +    PN   Y +L+DG C + +++    +  +M   G   D
Sbjct: 431 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALD 490

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           DF+Y  LI        V EA+++Y+E+  +G  P   T  TL
Sbjct: 491 DFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 12/280 (4%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G + +V +YN L++ L ++GH      ++K++ +          PN VT+ I+I G CK 
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG------CSPNLVTFKILIRGNCKA 75

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G   +A E    +   ++ P+V  +  LIHG     + ++A  L   M    V P++ + 
Sbjct: 76  GQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTY 135

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVR--PNAFTYNTLMD-GFCLTGKINRVKELFVS 287
           N +++ LCK+G ++ A  LL+ M++   +  P+  TYNTL++ G C  G +    E+   
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDG 195

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+  G   D  +YN +I+  C    V EA  +   +      P +VT+NTL  G  +   
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM 252

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             RAL++  EM   ++  D  TY   ++GLC   QV+  +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 292



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 48/125 (38%), Gaps = 35/125 (28%)

Query: 289 ESMGCKHDDFSYN-----------------------------------ILINGYCKNKEV 313
           E  G KHD  SYN                                   ILI G CK  + 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             AL     L    + P V  +N L HGLF+    ++A+KLF  M+ + V  D  TY T 
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 374 IDGLC 378
           I GLC
Sbjct: 139 ISGLC 143


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 201/407 (49%), Gaps = 34/407 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL  L KN   D    LF  +++ G  PD  TY+ +++  CK G++     +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            GR     F P+V  + +LI G+C E RI  A  L  ++   G +PNV++Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 129 TGHTIVALNLFKEM---------------TNGNGEIGVVFK--------------PNTVT 159
           +G+  +A  LF +M                 G    G +++              PN V 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I GLC  G +++A ++  QM+     PNV TY+ LI GF  + D   A      M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G +PNVV+   +++ LCKN   D A+ L++ M      PN  T+NT + G C  G++ 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L   M+  GC  +  +YN L++   +  + EEA  L+ E+  + ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           +G         AL+LF +      A D+ TY T I   C + +V+  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 189/369 (51%), Gaps = 11/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L     +  +  L+  +   GL P+++TY+IL+   CK  +V     +
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+T+++  LC   +I +A  L  + K     P+V  YN LI+G+C+
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   VA+ L  EM + NG       PN V+YS II+ LC  G V+ A  LF QM     
Sbjct: 257 EGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+ T+T LI G        EA  L   M+  G +PNVV+ N +++ LC NG ++ A +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M +    PN  TY+ L+DGF  +G +    E +  M S GC+ +  +Y  +++  C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++A SL  ++  +G  P  +T+NT   GL    + E A+KL   MQG+    +  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 369 TYRTFIDGL 377
           TY   +D L
Sbjct: 491 TYNELLDAL 499



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 190/410 (46%), Gaps = 48/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  + K    +  + L   +   G+ P++ +YS +IN  C  G V L F +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F ++ LR C A N+ TFT LIKG     ++ EA  L+  +   GCEPNV+ YNTLI+GLC
Sbjct: 302 FAQMFLRGCDA-NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    AL +  +M       G +  PN  TYSI+IDG  K G +  A E + +M    
Sbjct: 361 SNGSLEEALQVCDQMQRS----GCL--PNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PNVVTYT ++   C  + +++A  L+ +M  +G  PN ++ N  +  LC NG+++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 248 RLLDLMV-----------------------------------QCDVRPNAFTYNTLMDGF 272
           +LL+ M                                      +++PN  TYNT++ GF
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPT 331
              G +    +LF      G   D  +YN +I+ YCK  +V+ A  L   +   K   P 
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY----RTFIDGL 377
           ++TY +L  G       E A+    +     +  +  T+    R F D L
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 153/348 (43%), Gaps = 45/348 (12%)

Query: 64  LGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           LGF  F  I  S  F     T+  +I+ L  E  +     +  ++K  G       +  +
Sbjct: 58  LGF--FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICI 115

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------------------ 152
           ING  R G    AL +F  +    GE G                                
Sbjct: 116 INGYKRVGSAEQALKMFYRI----GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 153 ---FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                PN  TY+I++  LCK   VD A +LF++M  +   P+ VTYT+++   C A   +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A+ L         +P+V   N +++ +CK G+++ A +LL  M+   V PN  +Y+ ++
Sbjct: 232 DARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +  C++G +     LF  M   GC  +  ++  LI G     ++ EAL L+  +   G +
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           P VV YNTL HGL      E AL++  +MQ +    +  TY   IDG 
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 9/232 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L KN  +D   SL +++   G  P+  T++  I   C  G+V  
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  R+      PN+ T+  L+  L   ++  EA  LF +++A   +PN++TYNT++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 125 GLCRTGHTIVALNLF-KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           G  R G    AL LF K +  G         P+++TY+ +I   CK+G V  A +L  ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTA-------PDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 184 -KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
              +  +P+++TYTSLI G C+  +  EA   L + ++QG+ PN  + N ++
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           L  F  + N N      F+    TY ++I+ L +E  +D  + +  QMK + +N     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
             +I+G+       +A  +   + + G +P V   N +++ L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + PN FTYN L+   C   +++   +LFV M + GC  D  +Y  +++  CK  ++++
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L         KP+V  YN L  G+ +  + E A+KL  EM  N V  +  +Y   I+
Sbjct: 233 ARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 376 GLCVRPQVRFTYA 388
            LCV   V   +A
Sbjct: 288 SLCVSGNVELAFA 300


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 204/400 (51%), Gaps = 31/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N ++  L K +  D   +  +++ +  + P+ +TY+ LI  +   GQ      
Sbjct: 251 PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVT + L+  LC   +I EA  +F  +   G  P+V +YN ++NG  
Sbjct: 311 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 371 TKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L+ E
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 489

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G+  ++V  + I+N LCK G++ +A  + DL V   + P+A  Y+ LMDG+CL GK
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 549

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  +GIKP+ + Y+ 
Sbjct: 550 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 609

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  GLF+  +   A   F EM  + +A D CTY   + GL
Sbjct: 610 IIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    N++  
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             L++G C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M 
Sbjct: 150 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  PN V Y+ +IDG  KEG V+KA +LF +M    + P++VTY S++H  C
Sbjct: 210 EG----GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 265

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++ V PN  + N ++      G+   A R+   M +  + P+  
Sbjct: 266 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T + LM   C  GKI   +++F +M   G   D FSYNI++NGY     + +   L++ +
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P   T+N L          ++A+ +F EM+ + V  D  TYRT I  LC
Sbjct: 386 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 181/374 (48%), Gaps = 6/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+NI+L   A       +  LF  +   G+ PD YT+++LI  +   G + 
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 411

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+ ++I  LC   ++ +A   F ++   G  P+   YN LI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +S II+ LCK G V  A+ +F   
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVF------FSSIINNLCKLGRVMDAQNIFDLT 525

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L+P+ V Y+ L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 585

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   Y+ ++DG    G+    K  F  M   G   D  +YNI+
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIV 645

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G  KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  +  + +
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 705

Query: 364 AADTCTYRTFIDGL 377
                TY   I  L
Sbjct: 706 VPSVVTYSIMITNL 719



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 85/452 (18%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S++ILL  L    K+   D +L +     ++   P++  Y+ +I+ 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDG 228

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT+ S++  LC    + +A A   ++      PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT S+++  LCK G + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKIKE 342

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +Y  +++G+                                 
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK----------- 294
           + + YN L+ GFC  G + + KEL   + + G               CK           
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522

Query: 295 ---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                     D   Y++L++GYC   ++E+AL +++ +   GI+P VV Y TL +G  +I
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 582

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +  L LF EM    +   T  Y   IDGL
Sbjct: 583 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+   A     D  + +F  +   G+ PD+ TY  +I   C++G++      
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++    AP+   +  LI+G C    +++A  L +++   G   +++ ++++IN LC+
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+F    N      V   P+ V YS+++DG C  G ++KA  +F  M    +
Sbjct: 512 LGRVMDAQNIFDLTVN------VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y +L++G+C     +E   L  EM+ +G++P+ +  ++I++ L + G+   A  
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  +  +  TYN ++ G       +    LF  + +M  K +  + N +I+G  
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           + + VEEA  L+  +    + P+VVTY+ +   L +    E A  +F  MQ
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 177/390 (45%), Gaps = 12/390 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +    D  +  F ++   G+ PD Y Y+ LI  FC  G +  
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 482

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   I+ +    ++V F+S+I  LC   R+++A  +F      G  P+ + Y+ L++
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL +F  M +   E      PN V Y  +++G CK G +D+   LF +M 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIGRIDEGLSLFREML 596

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+ + Y+ +I G   A     AK    EM + G+  ++ + N+++  L KN   D
Sbjct: 597 QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 656

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   +   +V+ N  T NT++DG   T ++   K+LF S+          +Y+I+I
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 716

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   VEEA  +++ +   G +P     N +   L +  +  RA     ++   + +
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776

Query: 365 ADTCTYRTFID-----GLCVRPQVRFTYAR 389
            +  T    +D     G C R  +RF  A+
Sbjct: 777 LEHLTTMLLVDLFSSKGTC-REHIRFLPAK 805



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 143

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            N +  + +++G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 144 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    PNVV+ N +++   K G ++ A  L   MVQ  + P+  TYN+++  
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M +     ++++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT + L   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 201/407 (49%), Gaps = 34/407 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL  L KN   D    LF  +++ G  PD  TY+ +++  CK G++     +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            GR     F P+V  + +LI G+C E RI  A  L  ++   G +PNV++Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 129 TGHTIVALNLFKEM---------------TNGNGEIGVVFK--------------PNTVT 159
           +G+  +A  LF +M                 G    G +++              PN V 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I GLC  G +++A ++  QM+     PNV TY+ LI GF  + D   A      M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G +PNVV+   +++ LCKN   D A+ L++ M      PN  T+NT + G C  G++ 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L   M+  GC  +  +YN L++   +  + EEA  L+ E+  + ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           +G         AL+LF +      A D+ TY T I   C + +V+  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 189/369 (51%), Gaps = 11/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L     +  +  L+  +   GL P+++TY+IL+   CK  +V     +
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+T+++  LC   +I +A  L  + K     P+V  YN LI+G+C+
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   VA+ L  EM + NG       PN V+YS II+ LC  G V+ A  LF QM     
Sbjct: 257 EGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+ T+T LI G        EA  L   M+  G +PNVV+ N +++ LC NG ++ A +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M +    PN  TY+ L+DGF  +G +    E +  M S GC+ +  +Y  +++  C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++A SL  ++  +G  P  +T+NT   GL    + E A+KL   MQG+    +  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 369 TYRTFIDGL 377
           TY   +D L
Sbjct: 491 TYNELLDAL 499



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 190/410 (46%), Gaps = 48/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  + K    +  + L   +   G+ P++ +YS +IN  C  G V L F +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F ++ LR C A N+ TFT LIKG     ++ EA  L+  +   GCEPNV+ YNTLI+GLC
Sbjct: 302 FAQMFLRGCDA-NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    AL +  +M       G +  PN  TYSI+IDG  K G +  A E + +M    
Sbjct: 361 SNGSLEEALQVCDQMQRS----GCL--PNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PNVVTYT ++   C  + +++A  L+ +M  +G  PN ++ N  +  LC NG+++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 248 RLLDLMV-----------------------------------QCDVRPNAFTYNTLMDGF 272
           +LL+ M                                      +++PN  TYNT++ GF
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPT 331
              G +    +LF      G   D  +YN +I+ YCK  +V+ A  L   +   K   P 
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY----RTFIDGL 377
           ++TY +L  G       E A+    +     +  +  T+    R F D L
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 153/348 (43%), Gaps = 45/348 (12%)

Query: 64  LGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           LGF  F  I  S  F     T+  +I+ L  E  +     +  ++K  G       +  +
Sbjct: 58  LGF--FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICI 115

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------------------ 152
           ING  R G    AL +F  +    GE G                                
Sbjct: 116 INGYKRVGSAEQALKMFYRI----GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 153 ---FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                PN  TY+I++  LCK   VD A +LF++M  +   P+ VTYT+++   C A   +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A+ L         +P+V   N +++ +CK G+++ A +LL  M+   V PN  +Y+ ++
Sbjct: 232 DARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +  C++G +     LF  M   GC  +  ++  LI G     ++ EAL L+  +   G +
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           P VV YNTL HGL      E AL++  +MQ +    +  TY   IDG 
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 9/232 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L KN  +D   SL +++   G  P+  T++  I   C  G+V  
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  R+      PN+ T+  L+  L   ++  EA  LF +++A   +PN++TYNT++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 125 GLCRTGHTIVALNLF-KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           G  R G    AL LF K +  G         P+++TY+ +I   CK+G V  A +L  ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTA-------PDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 184 -KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
              +  +P+++TYTSLI G C+  +  EA   L + ++QG+ PN  + N ++
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           L  F  + N N      F+    TY ++I+ L +E  +D  + +  QMK + +N     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
             +I+G+       +A  +   + + G +P V   N +++ L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + PN FTYN L+   C   +++   +LFV M + GC  D  +Y  +++  CK  ++++
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L         KP+V  YN L  G+ +  + E A+KL  EM  N V  +  +Y   I+
Sbjct: 233 ARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 376 GLCVRPQVRFTYA 388
            LCV   V   +A
Sbjct: 288 SLCVSGNVELAFA 300


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 191/354 (53%), Gaps = 6/354 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  ++  LAKNK     ++L +++ + G  P + TY+ L+N  CKMG++     +  
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I+ +   P+VVT+TSLI GL  + R  EA  LF ++ + G   + + Y  LI GL + G
Sbjct: 94  KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +++K MT+     G V  P+ VT S +IDGLCK G +  A  +F  M+   L P
Sbjct: 154 KIPQASSVYKTMTSQ----GCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V Y++LIHG C A   + A  +L +M      P+ ++ N++++ LCK+G +  A    
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++   +P+ +TYN L+ GFC  G  +    +F  M S  C  +  +Y  LI+G CK 
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +++ +A   Y  +  +G  P    Y++L  GL +  + E    LF EM+ + VA
Sbjct: 328 RQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 381



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F+IL+  L K        SL +   + G   D++TY+ +++   K  ++     +  +I
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   P + T+ +L+ GLC   R+ EA  L  K+   GC P+V+TY +LI+GL +   +
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LFKEM +           +TV Y+ +I GL + G + +A  ++  M  +   P+V
Sbjct: 121 FEAYKLFKEMASRG------LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT +++I G C A     A  +   M  +G+ PN V  + +++ LCK  KMD A  +L  
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    P+  TYN L+DG C +G +   +  F  M   GCK D ++YNILI+G+CK   
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            + A  +++++      P VVTY TL  GL + RQ  +A   +  M+      D+  Y +
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 373 FIDGLC 378
            +DGLC
Sbjct: 355 LVDGLC 360



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 181/347 (52%), Gaps = 7/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++N LL  L K    +  + L +++   G  PD+ TY+ LI+   K  +    + +
Sbjct: 67  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL 126

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     A + V +T+LI+GL    +I +A++++  + + GC P+V+T +T+I+GLC+
Sbjct: 127 FKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +FK M            PN V YS +I GLCK   +D A E+  QMK    
Sbjct: 187 AGRIGAAVRIFKSMEARG------LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY  LI G C + D   A+    EM++ G +P+V + N++++  CK G  D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M      PN  TY TL+ G C   ++ +    +  M+  GC  D F Y+ L++G C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           K+ ++E    L++E+   G+  +      +FH L +  + + A+ LF
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLF 406



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 176/336 (52%), Gaps = 6/336 (1%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           T+SILIN   K G +     +      +    ++ T+T+++  L    +I EA AL  K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A GC P + TYN L+NGLC+ G    A++L +++ + NG       P+ VTY+ +IDGL
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGL 114

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K+    +A +LF +M    L  + V YT+LI G   A    +A  +   M  QG  P+V
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ + +++ LCK G++  A R+   M    + PN   Y+ L+ G C   K++   E+   
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+   C  D  +YNILI+G CK+ +V  A + ++E+   G KP V TYN L  G  +   
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            + A  +F +M  +  + +  TY T I GLC R Q+
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K +        ++ +   G  PD + YS L++  CK G++  G ++
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCML 371

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + RS  A N  T T LI  LC  +R+ EA +LF  ++  G  P+   YN++I+ L +
Sbjct: 372 FDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIK 429

Query: 129 TGHTIVALNLFKEM 142
           +G       +++EM
Sbjct: 430 SGKVNEGQAVYQEM 443


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K K  D    + +++   G+ P+  TY+ LI+ +   G       +
Sbjct: 257 PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 316

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+V    S +  LC   RI EA  +F  +   G +P+VI+Y  L++G   
Sbjct: 317 FKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYAT 376

Query: 129 TGHTIVALNLFKEMT---------------NGNGEIGVVFK--------------PNTVT 159
            G      NLF  M                N    +G++ K              P+ +T
Sbjct: 377 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIIT 436

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +I   C+ G +D A E F  M    + P+   Y+ LI G C+  D  +AK L+ +M+
Sbjct: 437 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 496

Query: 220 DQGVQPNVVSS-NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            +G+ P  +     I+N LCK G++     ++DL++    RPN  T+N+L+DG+CL G +
Sbjct: 497 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L  SMES+G + D ++YN L++GYCK+  +++AL+L+ ++  K +  T V+YN +
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+ R+   A ++F EM  + +A    TY T + GLC
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 656



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 42/408 (10%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P + ++NIL+ C  + +  D  L +F RL   GL PD+++Y+ LI+ F K G+V    
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 244

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F ++      PNVVT++SLI GLC    + +A  +  ++   G  PN +TYN LI+G 
Sbjct: 245 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 304

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             +G    ++ +FKEM++       +  P+    +  +  LCK G + +A+++F  M  +
Sbjct: 305 STSGMWKESVRVFKEMSSS------LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 358

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+V++Y +L+HG+  A        L   MV +GV P+    N ++N   + G MD +
Sbjct: 359 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 418

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + + M +  V P+  T++T++  FC  G+++   E F  M   G   D   Y+ LI G
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478

Query: 307 YCKNKEVEEALSLYNELPFKGI------------------------------------KP 330
            C  +++ +A  L +++  KGI                                    +P
Sbjct: 479 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 538

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++T+N+L  G   +   + A+ L   M+   V  D  TY T +DG C
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 586



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 51/384 (13%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIG---LFPDLYTYSILINCF 56
           +P P    N LL  LA+              + LFKR++        P +YTY+ILINC+
Sbjct: 140 APAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCY 199

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
            +  +  LG  +FGR+LR+                                   G  P+V
Sbjct: 200 RRARRPDLGLPVFGRLLRT-----------------------------------GLGPDV 224

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            +YN LI+G  + G    A +LF +M     E G++  PN VTYS +I+GLCK   +DKA
Sbjct: 225 FSYNALIDGFSKEGEVDKAHDLFYKME----EQGIM--PNVVTYSSLINGLCKTKEMDKA 278

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +  QM    + PN +TY  LIHG+  +  W E+  +  EM    + P+V + N  M  
Sbjct: 279 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 338

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK+G++  A  + D MV    +P+  +Y  L+ G+   G I  +  LF  M   G   D
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              +N LIN Y +   ++++L ++ ++  +G+ P ++T++T+      + + + A++ F 
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 357 EMQGNDVAADTCTYRTFIDGLCVR 380
            M    V  DT  Y   I G C R
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNR 482



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  LL   A       + +LF  +   G+ PD + ++ LIN + ++G +    ++
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P+++TF+++I   C   R+ +A   F  +   G  P+   Y+ LI G C 
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L  +M +       +  P    ++ II+ LCKEG V + K++   + +   
Sbjct: 482 RRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++T+ SL+ G+C   +  EA GLL  M   GV+P++ + N +++  CK+G++D+A  
Sbjct: 537 RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALT 596

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V   + +YN ++ G     +    KE+F  M   G      +Y  ++ G C
Sbjct: 597 LFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 656

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    +     
Sbjct: 657 RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTIL 716

Query: 369 TYRTFIDGL 377
           TYR  I  L
Sbjct: 717 TYRVMITNL 725



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 7/360 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FN L+   A+    D  L +F+ +   G+ PD+ T+S +I+ FC++G++      
Sbjct: 397 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK 456

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY-NTLINGLC 127
           F  ++ +   P+   ++ LI+G C    +V+A  L + + + G  P  I +  ++IN LC
Sbjct: 457 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 516

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G      ++  ++    G+     +PN +T++ ++DG C  G + +A  L   M+   
Sbjct: 517 KEGRVAEGKDVV-DLIIHTGQ-----RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++ TY +L+ G+C     ++A  L  +M+ + V    VS N+I++ L +  +   A 
Sbjct: 571 VEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 630

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   M++  +  +  TY T++ G C     +    L   + SM  K D  ++NI+I   
Sbjct: 631 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K    +EA  L+  +   G+ PT++TY  +   L +    E A  LF  M+ +    D+
Sbjct: 691 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 750



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 9/352 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPD-LYTYSILINCFCKMGQVSLGF 66
           PP  + ++ L+      +       L   + S G+ P  +  ++ +IN  CK G+V+ G 
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   I+ +   PN++TF SL+ G C    + EA  L   +++ G EP++ TYNTL++G 
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    AL LF++M +    +       +V+Y+II+ GL +      AKE+F +M   
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTL------TSVSYNIILHGLFQARRTIVAKEMFHEMIES 639

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  ++ TY +++ G C  N  +EA  LL ++    V+ ++++ N+++  + K G+   A
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   +    + P   TY  ++              LF SME   C  D    N +I  
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 759

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA-LKLFVE 357
                EV +A +  +++  KGI P   T + L + LF +    R  +KL  E
Sbjct: 760 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIY-LFSVNGKYREYIKLLPE 810



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 87/160 (54%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P + + N+++N   +  + D    +   +++  + P+ F+YN L+DGF   G++++  +L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  ME  G   +  +Y+ LING CK KE+++A  +  ++   G++P  +TYN L HG   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               + ++++F EM  + +  D     +F+  LC   +++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK 346


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 189/369 (51%), Gaps = 12/369 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N LL  LAK+   D V   +  +   G  P+ YTY  L+   C+  +      +F  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNV +++ LI GLC   ++ EAA L  ++   G +PNV+TY +L++GLC+ G  
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 133 IVALNLFKEMTNGNGEIGVVFK---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
             A++LF  M         V++   P+ V Y+++IDG  K+G + +A  LF +M  +   
Sbjct: 139 KEAVDLFSRM---------VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P V TY SL+ GF    ++   + L  +M+ QG  PN+ + N +++  CK G M  A RL
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M      P+  +YNTLM G C  GK +  + L   M   G   D  SYNILI+GY K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +  ++ A+ L+ E+P  G++P   +Y+T+   L    +   A  +F +M  N  A D   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 370 YRTFIDGLC 378
               + GLC
Sbjct: 370 VIPLVIGLC 378



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L + + ++   S+F+ + + G  P++++YSILI   C+  +V     +
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PNVVT+ SL+ GLC   ++ EA  LF+++   GC P+ + YN LI+G  +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 129 TGHTIVALNLFKEMT------------------NGNGEIGVV---FK--------PNTVT 159
            G    A  LF+EM                   +  GE G V   FK        PN  T
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ ++DG CK G + +A  LFL+M+     P+VV+Y +L+ G C     +EA+ LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV P++VS N++++   K+G +D+A +L   + +  + P+AF+Y+T++D  C  GK+ 
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +F  M + G   D      L+ G C+ + + E+  L+  +      P +  YN L 
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + L + ++++   ++F E+     + D    +  ++ L
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 148/297 (49%), Gaps = 6/297 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
             +++  L++ L    R       +  +   GC PN  TY  L+  LC+      A ++F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           + M            PN  +YSI+I GLC+   VD+A EL  +M      PNVVTY SL+
Sbjct: 76  RGMAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G C      EA  L   MV +G  P+ V  NV+++   K G M  A RL + M++    
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P  FTYN+L+ GF   G+  RV+ LF  M   GC  + F++N L++G+CK  ++ EA  L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + E+   G  P VV+YNTL  G+    +   A +L  EM  + V  D  +Y   IDG
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 6/289 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    +N+L+   +K         LF+ +   G  P ++TY+ L++ F + G+      
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +LR    PN+ TF +L+ G C    +VEA  LF ++++ GC P+V++YNTL+ G+C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L +EM            P+ V+Y+I+IDG  K G +D A +LF ++    
Sbjct: 274 SKGKPHEAQRLLREMIRSG------VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  +Y+++I   C A     A  +  +M+  G  P+      ++  LC+  ++  + 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            L   MV+ +  P    YN LM   C   + + V E+F  +   G   D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 114/228 (50%)

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V +   T++Y+ +++ L K G  D     +  M      PN  TY  L+   C A  + E
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ +   M  QG  PNV S ++++  LC+  K+D A+ LL+ M+    +PN  TY +L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C  GK+    +LF  M   GC  D   YN+LI+G+ K  ++ EA  L+ E+  KG  P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TV TYN+L  G     +  R   LF +M       +  T+   +DG C
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 188/375 (50%), Gaps = 6/375 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP   +FN L+  L         L++F  +   G  P + TYSIL++  CK       
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            V+   +      P++VT+  LI  +C E  + EA  + + L + GC+P+ +TY  ++  
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC +        LF EM +          P+ VT++ I+  LC++G VD+A ++   M  
Sbjct: 277 LCGSERWKEVEELFAEMASNK------CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE 330

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P++VTY+S++ G C     ++A  LL  +   G +P+ ++   ++  LC   + ++
Sbjct: 331 HGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEH 390

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  MV  D  P+  T+NT++   C  G ++R  ++   M   GC  D  +YN +I+
Sbjct: 391 AEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIID 450

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C  + +++A+ L + L   G KP +VT+NTL  GL  + + E A +L V M  +D   
Sbjct: 451 GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510

Query: 366 DTCTYRTFIDGLCVR 380
           D  T+ T I  LC +
Sbjct: 511 DATTFNTVITSLCQK 525



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 186/372 (50%), Gaps = 12/372 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ILL    K   Y   + L   + + G  PD+ TY++LIN  C  G V     I
Sbjct: 195 PSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ VT+T ++K LC   R  E   LF ++ +  C P+ +T+NT++  LC+
Sbjct: 255 LSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQ 314

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +   M+    E G +  P+ VTYS I+DGLC  G VD A EL  ++K    
Sbjct: 315 QGLVDRAIKVVDHMS----EHGCI--PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ + YT+++ G C    W  A+ L+ EMV     P+ V+ N ++  LC+ G +D A +
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++ M +    P+  TYN+++DG C    I+   EL  +++S GCK D  ++N L+ G C
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC 488

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAA 365
                E+A  L   +      P   T+NT+   L +   + QA   LK+  E   N    
Sbjct: 489 SVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAE---NGCIP 545

Query: 366 DTCTYRTFIDGL 377
           +  TY   +D L
Sbjct: 546 NQSTYNIVVDAL 557



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 185/371 (49%), Gaps = 12/371 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV   NIL+  L           +F  L   G    + TY+ ++N +C+ G++     
Sbjct: 95  PLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARR 151

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +    F P+  TF  LI+ LC   R+ +A A+F  +   GC P+V+TY+ L++  C
Sbjct: 152 LISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A+ L  EM     E      P+ VTY+++I+ +C EG VD+A  +   +    
Sbjct: 209 KASGYRQAMVLLDEMRAKGCE------PDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VTYT ++   C +  W E + L  EM      P+ V+ N I+  LC+ G +D A 
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +++D M +    P+  TY++++DG C  G+++   EL   ++S GCK D  +Y  ++ G 
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C  ++ E A  L  E+      P  VT+NT+   L +    +RA+K+  +M  N    D 
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442

Query: 368 CTYRTFIDGLC 378
            TY + IDGLC
Sbjct: 443 VTYNSIIDGLC 453



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 194/374 (51%), Gaps = 8/374 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++  +L  L  ++ +  V  LF  + S    PD  T++ ++   C+ G V  
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +      P++VT++S++ GLC   R+ +A  L ++LK++GC+P+ I Y T++ 
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 380

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC       A  L  EM   +        P+ VT++ +I  LC++G VD+A ++  QM 
Sbjct: 381 GLCSIEQWEHAEELMAEMVCSD------CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
               NP++VTY S+I G C+    ++A  LL  +   G +P++V+ N ++  LC   + +
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A +L+  M+  D  P+A T+NT++   C  G + +  E    M   GC  +  +YNI++
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K  + +EAL L + +      P ++TYNT+   + +  + E AL L   M  N ++
Sbjct: 555 DALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612

Query: 365 ADTCTYRTFIDGLC 378
            DT TYR+   G+C
Sbjct: 613 PDTITYRSLAYGIC 626



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN ++  L +    D  + +   ++  G  PD+ TYS +++  C +G+V     +
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+ + +T+++KGLC+  +   A  L  ++    C P+ +T+NT+I  LC+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+  NG       P+ VTY+ IIDGLC E  +D A EL   ++    
Sbjct: 420 KGLVDRAIKVVEQMSE-NG-----CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VT+ +L+ G C  + W +A+ L++ M+     P+  + N ++  LC+ G +  A  
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L +M +    PN  TYN ++D     GK     +L   M +     D  +YN +I+   
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNIT 591

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++EEAL L   +   G+ P  +TY +L +G+      +RA+++   +Q   ++ D  
Sbjct: 592 KAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDAT 651

Query: 369 TYRTFIDGLC 378
            Y   + G C
Sbjct: 652 FYNDILLGFC 661



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 12/303 (3%)

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
           C    VV    LIK LC+  R+ +A  +F  L   G    V+TYNT++NG CR G    A
Sbjct: 93  CLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDA 149

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             L           G+ F P+T T++ +I  LC  G V  A  +F  M +   +P+VVTY
Sbjct: 150 RRLIS---------GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTY 200

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           + L+   C A+ + +A  LL EM  +G +P++V+ NV++N +C  G +D A  +L  +  
Sbjct: 201 SILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
              +P+A TY  ++   C + +   V+ELF  M S  C  D+ ++N ++   C+   V+ 
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDR 320

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A+ + + +   G  P +VTY+++  GL ++ + + A++L   ++      DT  Y T + 
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 380

Query: 376 GLC 378
           GLC
Sbjct: 381 GLC 383



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 163/350 (46%), Gaps = 8/350 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  +L  L   + ++    L   +      PD  T++ +I   C+ G V     +
Sbjct: 370 PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKV 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +   P++VT+ S+I GLC E  I +A  L + L+++GC+P+++T+NTL+ GLC 
Sbjct: 430 VEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCS 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   M + +        P+  T++ +I  LC++G + +A E    M     
Sbjct: 490 VDRWEDAEQLMVNMMHSD------CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGC 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY  ++     A    EA  LL  M +    P++++ N +++ + K GKM+ A  
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALD 601

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +MV   + P+  TY +L  G C     +R   +   ++ MG   D   YN ++ G+C
Sbjct: 602 LLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFC 661

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +N   + A+  +  +   G  P   TY  L   L      + A +L V +
Sbjct: 662 QNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 8/321 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN ++  L +    D  + + ++++  G  PD+ TY+ +I+  C    +     
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      P++VTF +L+KGLC+  R  +A  L   +    C P+  T+NT+I  LC
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + A+   K M   NG I     PN  TY+I++D L K G   +A +L   M   N
Sbjct: 524 QKGLLLQAIETLKIMAE-NGCI-----PNQSTYNIVVDALLKAGKTQEALKLLSGMT--N 575

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+++TY ++I     A    EA  LL  MV  G+ P+ ++   +   +C+    D A 
Sbjct: 576 GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  +    + P+A  YN ++ GFC   + +   + F  M S GC  D+ +Y IL+   
Sbjct: 636 RMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695

Query: 308 CKNKEVEEALSLYNELPFKGI 328
                ++EA  L   L   G+
Sbjct: 696 AYECLLDEAKQLLVNLCSLGV 716


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 6/301 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  T++ LI+ FCK   V+     F  + +    PN+VT+ SLI GLC   ++ EA  L
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           + K+   G +PN++TYN LING C+      A  +F +++           PN +T++ +
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE------LVPNVITFNTM 384

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ID  CKEG +++   L   M  E + PNV TY  LI G C   D   AK LL EM ++G+
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + +VV+ N++++ LCKN K  NA +LL+ M    ++PN  TYNTLMDG+C+ GK+     
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +   ME    + +  +YN+LI GYCK  ++E A  L NE+  KG+ P   TY+ +   + 
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEML 564

Query: 344 E 344
           E
Sbjct: 565 E 565



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 198/372 (53%), Gaps = 12/372 (3%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R +H +   +++FNI +  L +    +      + + + G+ P++ TY+ L++ +CK G 
Sbjct: 194 RRIHTN---LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS 250

Query: 62  VSLGF---VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
               +        +L +   PN VTF +LI G C +  +  A   F +++  G +PN++T
Sbjct: 251 AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT 310

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN+LINGLC  G    A++L+ +M      +G+  KPN VTY+ +I+G CK+  + +A +
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKM------VGLGLKPNIVTYNALINGFCKKKMMKEATK 364

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  +  + L PNV+T+ ++I  +C      E   L   M+D+G+ PNV + N ++  LC
Sbjct: 365 VFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLC 424

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           +   +  A  LL+ M    ++ +  TYN L+DG C   K    ++L   M ++G K +  
Sbjct: 425 RKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHV 484

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN L++GYC   +++ AL++   +  +  +P VVTYN L  G  +I + E A  L  EM
Sbjct: 485 TYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544

Query: 359 QGNDVAADTCTY 370
               +  +  TY
Sbjct: 545 LEKGLNPNRTTY 556



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 191/371 (51%), Gaps = 9/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++S N LL  L K      V  ++K +    +  +L T++I IN  C+ G+++       
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224

Query: 71  RILRSCFAPNVVTFTSLIKGLC---AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +     +PNVVT+ +L+ G C   +  ++ +A A   ++ A    PN +T+NTLI+G C
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +  +   A   F+EM           KPN VTY+ +I+GLC  G +++A +L+ +M    
Sbjct: 285 KDENVAAAKKAFEEMQKQG------LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN+VTY +LI+GFC      EA  +  ++  Q + PNV++ N +++  CK G M+   
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M+   + PN  TYN L+ G C    +   KEL   ME+ G K D  +YNILI+G 
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN +   A  L NE+   G+KP  VTYNTL  G     + + AL +   M+      + 
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518

Query: 368 CTYRTFIDGLC 378
            TY   I G C
Sbjct: 519 VTYNVLIKGYC 529



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 194/371 (52%), Gaps = 3/371 (0%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            ++L+    KN         F R    G    L + + L++   K  ++     ++  ++
Sbjct: 133 IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI 192

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +     N+ TF   I GLC   ++ +A      +KA+G  PNV+TYNTL++G C+ G   
Sbjct: 193 KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS-- 250

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  ++K        +     PN VT++ +IDG CK+  V  AK+ F +M+ + L PN+V
Sbjct: 251 -AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY SLI+G C+     EA  L  +MV  G++PN+V+ N ++N  CK   M  A+++ D +
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            + ++ PN  T+NT++D +C  G +     L  SM   G   +  +YN LI G C+ +++
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDL 429

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + A  L NE+  KG+K  VVTYN L  GL +  ++  A KL  EM    +  +  TY T 
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489

Query: 374 IDGLCVRPQVR 384
           +DG C+  +++
Sbjct: 490 MDGYCMEGKLK 500



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 6/295 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+    K+++       F+ +   GL P++ TY+ LIN  C  G++     +
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + +++     PN+VT+ +LI G C +  + EA  +F  +      PNVIT+NT+I+  C+
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +L   M +     G++  PN  TY+ +I GLC++  +  AKEL  +M+ + L
Sbjct: 391 EGMMEEGFSLCSSMLDE----GIL--PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY  LI G C  +    A+ LL EM + G++PN V+ N +M+  C  GK+  A  
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +   M +   +PN  TYN L+ G+C   K+     L   M   G   +  +Y+I+
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K K       +F  ++   L P++ T++ +I+ +CK G +  GF +
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     PNV T+  LI GLC +  +  A  L  +++  G + +V+TYN LI+GLC+
Sbjct: 401 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCK 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +  A  L  EM N      +  KPN VTY+ ++DG C EG +  A  +  +M+ E  
Sbjct: 461 NDKSRNAEKLLNEMFN------LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            PNVVTY  LI G+C  N    A GLL EM+++G+ PN  + +++  E+ + G
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 176/335 (52%), Gaps = 9/335 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+  Y+ ++  +C  GQ+     +   +      P+  T+ +LI+GLC   R   A A+
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              +   GC P+V+TY  L+   C+      A+ L  EM +          P+ VTY+++
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG------CAPDIVTYNVV 242

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ++G+C+EG V+ A E    +      PN V+Y  ++ G   A  W +A+ L+ EM  +G 
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNVV+ N++++ LC+ G ++ A  +L+ M Q    PN+ +YN L+  FC   KI++  E
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               M S GC  D  SYN L+   C+N EV+ A+ L ++L  KG  P +++YNT+  GL 
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  + + AL+L  EM    +  D  TY T   GLC
Sbjct: 423 KAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L         L++ + +   G  PD+ TY+IL+   CK       
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +     AP++VT+  ++ G+C E R+ +A      L ++GCEPN ++YN ++ G
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L        A  L +EM +          PN VT++++I  LC+ G V+ A E+  QM  
Sbjct: 281 LFTAERWEDAEKLMEEMAHKG------CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN ++Y  L+H FC     ++A   +  MV +G  P++VS N ++  LC+NG++D 
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  +      P   +YNT++DG    GK     EL   M S G + D  +Y+ + +
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   +EEA+  + ++   GI+PT   YN +  GL + R+   A+ LF  M  +    
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514

Query: 366 DTCTYRTFIDGL 377
           +  TY   ++GL
Sbjct: 515 NESTYTILVEGL 526



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 171/350 (48%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL    K   Y   + L   ++  G  PD+ TY++++N  C+ G+V      
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  ++KGL    R  +A  L  ++   GC PNV+T+N LI+ LCR
Sbjct: 259 LKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M     + G    PN+++Y+ ++   CK+  + KA E    M     
Sbjct: 319 RGLVEPAMEVLEQMP----QYGCT--PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V+Y +L+   C   + + A  LL ++ D+G  P ++S N +++ L K GK   A  
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M    ++P+  TY+T+  G C   +I      F  ++ MG +     YN ++ G C
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLC 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K +E   A+ L+  +   G  P   TY  L  GL      + A +LF ++
Sbjct: 493 KRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 12/255 (4%)

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G    AL L   +   N        P     + +I  LC  G    A+ +      
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGP----CAALIKKLCASGRTADARRVLAAS-- 130

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+V+ Y +++ G+C A   + A+ L+ +M    V+P+  + N ++  LC  G+  N
Sbjct: 131 ---GPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +L+ M +    P+  TY  L++  C      +  +L   M   GC  D  +YN+++N
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C+   VE+A+     LP  G +P  V+YN +  GLF   + E A KL  EM       
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 366 DTCTYRTFIDGLCVR 380
           +  T+   I  LC R
Sbjct: 305 NVVTFNMLISFLCRR 319



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++ +LC +G+  +A R+L         P+   YN ++ G+C  G+++  + L   M   
Sbjct: 109 ALIKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP-- 161

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
             + D ++YN LI G C       AL++  ++  +G  P VVTY  L     +    ++A
Sbjct: 162 -VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +KL  EM     A D  TY   ++G+C   +V
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 201/400 (50%), Gaps = 29/400 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N ++  L K +  D    + +++   G+ PD  TY+ LI+ +  +GQ      
Sbjct: 243 PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVR 302

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PN VT ++ +  LC   RI EA   F  + A G + N+I+Y+TL++G  
Sbjct: 303 MFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYA 362

Query: 128 RTGHTIVALNLFKEMT---------------NGNGEIGVV--------------FKPNTV 158
             G  +   NLF  M                NG  + G+V                P+ +
Sbjct: 363 TAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVL 422

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY  +I   C+ G +D A + F  M  + + PN   Y  LI GFC   D  +A+ L+ E+
Sbjct: 423 TYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            ++G+ P ++S   ++N LCK G++  A R+ D++++   + +   + +L+DG+CL GK+
Sbjct: 483 RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM 542

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    +  +M S+G + D  +Y  L+NG CKN  +++ L L+ EL  KG+KPT  TY  +
Sbjct: 543 SEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGII 602

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF   +   A ++F EM  + +A    TY   + GLC
Sbjct: 603 LDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 11/354 (3%)

Query: 31  LSLFKRLNS-----IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
           ++LF R+++     + L P +YTYSILI+C C+  ++ L F  FG +LR     +V+  +
Sbjct: 84  VALFNRMSTGTGPRVAL-PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 86  SLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           SL++GLC   R  EA   LF ++   GC P+ I+Y+T++  +C  G +  AL++ +    
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
             G        N V YS ++ GL KEG V +A +LF +M  + + PNVVTY S+IH  C 
Sbjct: 203 QGGGCPC----NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A   ++A+G+L +MV  GVQP+ V+ N +++     G+   A R+   M    V PN  T
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            +T +   C  G+I   +E F SM + G K +  SY+ L++GY     + +  +L+N + 
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GI P    +N L +G  +      A+ +F +MQ   +  D  TY   I   C
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 170/345 (49%), Gaps = 6/345 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  +   G+ P+ + ++IL+N + K G V     IF  + +    P+V+T+ ++I   C
Sbjct: 373 LFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               + +A   F  +   G EPN   Y  LI G C  G  + A  L  E+ N        
Sbjct: 433 RMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG------ 486

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P  ++++ +I+ LCKEG V +A+ +F  +       +V  +TSLI G+C     +EA 
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +   MV  G++P++V+   ++N  CKNG++D+   L   ++   V+P  FTY  ++DG 
Sbjct: 547 RVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G+    KE+F  M   G      +Y+IL+ G C+N   EEA++++ +L    +K  +
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           V  N +   +F+ R+ E A  LF  +    +     TY   ++ L
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 172/335 (51%), Gaps = 6/335 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           ++  YS +++   K G+V     +F  + +    PNVVT+ S+I  LC    + +A  + 
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G +P+ +TYNTLI+G    G    A+ +FKEMT+     GV+  PNTVT S  +
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR----GVI--PNTVTCSTFV 323

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
             LCK G +++A+E F  M  +    N+++Y++L+HG+  A    +   L   MV  G+ 
Sbjct: 324 AFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV 383

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN    N+++N   K G +  A  + + M +  + P+  TY  ++  FC  G ++   + 
Sbjct: 384 PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDK 443

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M   G + +   Y  LI G+C + ++ +A  L  E+  KG+ P ++++ +L + L +
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
             +   A ++F  +      AD   + + IDG C+
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 184/391 (47%), Gaps = 13/391 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L G     +  + V  LF R+  +G  PD  +YS ++   C  G+      I    ++
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 75  SCFA-P-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                P NVV +++++ GL  E ++ EA  LF ++   G  PNV+TYN++I+ LC+    
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  + ++M  GNG      +P+ VTY+ +I G    G   +A  +F +M    + PN 
Sbjct: 263 DKAQGILRQMV-GNG-----VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT ++ +   C      EA+     M+ +G + N++S + +++     G + + S L +L
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL 376

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV+  + PN   +N L++G+   G +     +F  M+  G   D  +Y  +I+ +C+   
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A+  +N +  KG++P    Y  L  G        +A +L  E++   +     ++ +
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496

Query: 373 FIDGLC-----VRPQVRFTYARRKGNSGNTN 398
            I+ LC        Q  F    R G   + N
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVN 527



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FNIL+   AK       + +F+ +   GL PD+ TY  +I+ FC+MG +      
Sbjct: 384 PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDK 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN   +  LI+G C    +V+A  L  +++  G  P ++++ +LIN LC+
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F +M    GE     K +   ++ +IDG C  G + +A  +   M    +
Sbjct: 504 EGRVFEAQRIF-DMIIRTGE-----KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGI 557

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L++G C     ++   L  E++ +GV+P   +  +I++ L   G+   A  
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M++  +     TY+ L+ G C          +F  + +M  K D    NI+I+   
Sbjct: 618 MFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K +  EEA  L+  +P  G+ PTV TY  +   L +    E A  +F  M
Sbjct: 678 KARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 11/198 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    KN   D  L LF+ L   G+ P  +TY I+++     G+ +    +
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEM 618

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ S  A  + T++ L+ GLC  +   EA  +F KL A   + +++  N +I+ + +
Sbjct: 619 FQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFK 678

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  +     + G+V  P   TY+I+++ L KEG V++A+ +F  M    L
Sbjct: 679 ARRREEAEGLFASIP----DYGLV--PTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGL 732

Query: 189 NP-----NVVTYTSLIHG 201
           +P     NV+  T L  G
Sbjct: 733 SPTSHFINVIVRTLLEKG 750



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 59/125 (47%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +++ILL  L +N   +  +++F++L ++ +  D+   +I+I+   K  +      +F 
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFA 690

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I      P V T+T +++ L  E  + EA  +F+ +   G  P     N ++  L   G
Sbjct: 691 SIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKG 750

Query: 131 HTIVA 135
             + A
Sbjct: 751 EIVKA 755


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 190/343 (55%), Gaps = 6/343 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF+ +   GL  D  T++ LIN  C+ G++     +   ++      +VVT+T LI G C
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               +VEA  +  ++      PNV+TY  L +GLC+ G    A  L  EM N   E+   
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL--- 495

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              N  TY+ +I+GLCK G +++A  +  +M+      +V TYT+LI   C + +++ A 
Sbjct: 496 ---NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L EM+D+G++P++ + NV+MN  C +G+++   +LL+ M++ +VRPN  TYN+LM  +
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C+   +    E++  M S     ++ +YNILI G+CK + ++EAL  + E+  KG++ T 
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA 672

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
            +Y+ L   L + ++   A   F +M+   + A+   Y  ++D
Sbjct: 673 SSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 187/372 (50%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V ++  ++         +  + L   + + GL  +   Y+ +I   C  GQVS   
Sbjct: 283 SPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDAL 342

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +     A + V FT++I G C++  +  A  LF +++  G   + +T+  LINGL
Sbjct: 343 RVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGL 402

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  + +EM +   ++ VV      TY+++IDG CK G + +A  +  +M   
Sbjct: 403 CRAGELKEADRVLQEMVDKGLDVDVV------TYTVLIDGYCKRGNMVEAFRVHNEMVGR 456

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNVVTYT+L  G C   D   A  LL EM ++G++ NV + N ++N LCK G ++ A
Sbjct: 457 RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQA 516

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R++  M     R + +TY TL+D  C +G+ +R   +   M   G K    +YN+L+NG
Sbjct: 517 MRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNG 576

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C +  VE    L   +  K ++P VVTYN+L       +  +   +++  M   +VA +
Sbjct: 577 FCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPN 636

Query: 367 TCTYRTFIDGLC 378
             TY   I G C
Sbjct: 637 ENTYNILIKGHC 648



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 187/382 (48%), Gaps = 9/382 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S NILL  L            F  ++S    PD+ TY  +++ +C  G++     +  
Sbjct: 255 VCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLD 311

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +       N   +TS+I  LC + ++ +A  +   +   G   + + + T+I+G C  G
Sbjct: 312 EMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKG 371

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF+EM             + VT++ +I+GLC+ G + +A  +  +M  + L+ 
Sbjct: 372 DLAAARRLFEEMQKRG------LAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDV 425

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTYT LI G+C   +  EA  +  EMV + V PNVV+   + + LCK G +  A+ LL
Sbjct: 426 DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELL 485

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    +  N +TYN+L++G C  G + +   +   ME+ G + D ++Y  LI+  CK+
Sbjct: 486 HEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKS 545

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            E + A ++  E+  KGIKP++ TYN L +G     + E   KL   M   +V  +  TY
Sbjct: 546 GEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY 605

Query: 371 RTFIDGLCVRPQVRFTYARRKG 392
            + +   C+   ++ T    KG
Sbjct: 606 NSLMKQYCIDKNMKSTTEIYKG 627



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 192/392 (48%), Gaps = 29/392 (7%)

Query: 12  SSFNILLGCLA------KNKHY---------DTVLSLFKRLNSIGLFPDLY-----TYSI 51
           +SF++LL CL       + + Y         + VLS      +I LF +L      +++I
Sbjct: 201 ASFDLLLLCLPSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDKNVCSHNI 260

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+      G++      F  +      P+VVT+ +++ G C    +  A  L  ++ A G
Sbjct: 261 LLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKG 317

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
            E N   Y ++I  LC  G    AL + ++MT      GV    + V ++ +I G C +G
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMH----GVAL--DAVVFTTVISGFCSKG 371

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +  A+ LF +M+   L  + VT+T+LI+G C A +  EA  +L EMVD+G+  +VV+  
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYT 431

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           V+++  CK G M  A R+ + MV   V PN  TY  L DG C  G +    EL   M + 
Sbjct: 432 VLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + + ++YN LING CK   +E+A+ +  E+   G +  V TY TL   L +  + +RA
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +  EM    +     TY   ++G C+  +V
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 32/328 (9%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  D VL   + +   GL  D+ TY++LI+ +CK G +   F +   ++    APNVVT+
Sbjct: 409 KEADRVL---QEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           T+L  GLC +  +  A  L  ++   G E NV TYN+LINGLC+ G+   A+ +  EM  
Sbjct: 466 TALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEA 525

Query: 145 GNGEIGVV-----------------------------FKPNTVTYSIIIDGLCKEGFVDK 175
                 V                               KP+  TY+++++G C  G V+ 
Sbjct: 526 AGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEG 585

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
            K+L   M  +N+ PNVVTY SL+  +C   +      +   M  Q V PN  + N+++ 
Sbjct: 586 GKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIK 645

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             CK   M  A      M++  +R  A +Y+ L+       K +  +  F  M + G   
Sbjct: 646 GHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTA 705

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNEL 323
           +   Y+  ++       +E  ++L +EL
Sbjct: 706 EPDVYSFYMDISFNEDNLESTITLCDEL 733



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 8/221 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+  L K  + +  + +   + + G   D+YTY+ LI+  CK G+      +  
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P++ T+  L+ G C   R+     L   +      PNV+TYN+L+   C   
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK 616

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +      ++K M +          PN  TY+I+I G CK   + +A     +M  + L  
Sbjct: 617 NMKSTTEIYKGMHSQE------VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV--QPNVVS 229
              +Y++LI        ++EA+    +M ++G+  +P+V S
Sbjct: 671 TASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYS 711



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 2/113 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+     +K+  +   ++K ++S  + P+  TY+ILI   CK   +      
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYF 659

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITY 119
              ++         ++++LI+ L  + +  EA   F K++  G   EP+V ++
Sbjct: 660 HQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 198/375 (52%), Gaps = 12/375 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI---GLFPDLYTYSILINCFCKMGQVS 63
           SP  VS   +++ C    +    VL   + LN++   G   D  T +++I+ FC+ G V+
Sbjct: 221 SPDCVSFKLMVVACCNMGR----VLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVN 276

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
                F +++    APNV+ FT+LI GLC +  I +A  L  ++   G +PNV T+ TLI
Sbjct: 277 RVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GLC+ G T  A  LF ++   +G     +KPN  TY+ +I+G CKE  +++A+ L  +M
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDG-----YKPNVHTYTAMINGYCKEDKLNRAEMLLSRM 391

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           + + L PN  TYT+LI G C   ++  A  L+  M  +G  PN+ + N I++ LCK G +
Sbjct: 392 QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A RLL+ +    ++ +  TY  LM   C     NR    F  M  +G   D  SY  L
Sbjct: 452 DEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTL 511

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+ +C+ K+++E+  L+ E    G+ PT  TY ++  G         A+KLF  M  +  
Sbjct: 512 ISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571

Query: 364 AADTCTYRTFIDGLC 378
           A D+ TY   I GLC
Sbjct: 572 APDSITYGALISGLC 586



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 175/331 (52%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L K         L + +   G  P++YT++ LI+  CK G     F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+T++I G C E ++  A  L ++++  G  PN  TY TLI+G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + A  L   M    G+ G  F PN  TY+ IIDGLCK+G +D+A  L  ++    
Sbjct: 412 KVGNFVRAYELMDLM----GKEG--FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  + VTYT L+   C   D N +     +M+  G  P++ S   +++  C+  +M  + 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL +  V   + P   TY +++ G+C  G  +   +LF  M + GC  D  +Y  LI+G 
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           CK  ++++A +LY+ +  KG+ P  VT  TL
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 7/364 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           +++    +  + + V+  F ++  +GL P++  ++ LIN  CK G +   F +   ++R 
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIV 134
            + PNV T T+LI GLC +    +A  LF KL ++ G +PNV TY  +ING C+      
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  L   M     E G+V  PNT TY+ +IDG CK G   +A EL   M  E  +PN+ T
Sbjct: 384 AEMLLSRMQ----EQGLV--PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I G C     +EA  LL ++   G+Q + V+  ++M+  C+    + +    + M+
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +    P+  +Y TL+  FC   ++   + LF    S+G      +Y  +I GYC+     
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A+ L+  +   G  P  +TY  L  GL +  + + A  L+  M    ++    T  T  
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 375 DGLC 378
              C
Sbjct: 618 YEYC 621



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 178/366 (48%), Gaps = 11/366 (3%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNV 81
           A+N      +++   + + GL P   T + +++    MG V +   +F  + +   +P+ 
Sbjct: 165 AENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDC 224

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V+F  ++   C   R++EA      +   G   +  T   +I+  C+ G+    +  F +
Sbjct: 225 VSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M     E+G+   PN + ++ +I+GLCK+G + +A EL  +M      PNV T+T+LI G
Sbjct: 285 MV----EMGLA--PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDG 338

Query: 202 FCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            C      +A  L +++V   G +PNV +   ++N  CK  K++ A  LL  M +  + P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N  TY TL+DG C  G   R  EL   M   G   + ++YN +I+G CK   ++EA  L 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAE--RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N++   G++   VTY  L       RQA+  R+L  F +M       D  +Y T I   C
Sbjct: 459 NKVSVHGLQADGVTYTILMS--VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC 516

Query: 379 VRPQVR 384
            + Q++
Sbjct: 517 RQKQMK 522



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 7/293 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           ++ EA  +  +++  G  P+  T N +++     G   +A N+F EM     + GV   P
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMC----QRGV--SP 222

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V++ +++   C  G V +A+     M       +  T T +I  FC     N   G  
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +MV+ G+ PNV++   ++N LCK G +  A  LL+ MV+   +PN +T+ TL+DG C  
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           G   +   LF+ +  S G K +  +Y  +INGYCK  ++  A  L + +  +G+ P   T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           Y TL  G  ++    RA +L   M     + +  TY   IDGLC +  +   Y
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 11/277 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K    D    L  +++  GL  D  TY+IL++  C+    +   V 
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+  F P++ ++T+LI   C + ++ E+  LF +  + G  P   TY ++I G CR
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+T +A+ LF+ M+N          P+++TY  +I GLCKE  +D A+ L+  M  + L
Sbjct: 553 YGNTSLAVKLFQRMSNHGC------APDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDNAS 247
           +P  VT  +L + +C  +D + A    I ++D+  +   + + N ++ +LC  GK+D A+
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTA----INVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAA 662

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
                ++  +   N  T    M+    + K   V EL
Sbjct: 663 LFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSEL 699



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 7/251 (2%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           + N V   ++++   + G + +A  + ++M+ + L P+  T   ++           A+ 
Sbjct: 152 RANEVMQCMVMN-FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN 210

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           + +EM  +GV P+ VS  +++   C  G++  A R L+ MV+     +  T   ++D FC
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFC 270

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G +NRV   F  M  MG   +  ++  LING CK   +++A  L  E+  +G KP V 
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRTFIDGLCV-----RPQVRFTY 387
           T+ TL  GL +    E+A +LF+++  +D    +  TY   I+G C      R ++  + 
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390

Query: 388 ARRKGNSGNTN 398
            + +G   NTN
Sbjct: 391 MQEQGLVPNTN 401


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 182/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL   AK    D V   FK +   G  P ++TY+I+I+C  K G +     +
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+ S+I G     R+ +    F ++K+  CEP+VITYN+LIN  C+
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G     L  ++EM           KPN V+YS ++D  CKE  + +A + ++ M+    
Sbjct: 216 SGKLPKGLEFYREMKQSG------LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSL+   C   + ++A  L  EM++ GV+ NVV+   +++ LC   +M  A +
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   V PN  +YN L+ GF     ++R  EL   ++  G + D   Y   I G C
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++E A  + NE+   GIK   + Y TL    F+       L L  EMQ  D      
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVV 449

Query: 369 TYRTFIDGLC 378
           T+   IDGLC
Sbjct: 450 TFCVLIDGLC 459



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L      +     F ++    +FP   + + L++ F K+G+       
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   P V T+  +I  +  E  I  A  LF ++K  G  P+ +TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     +  F+EM + + E      P+ +TY+ +I+  CK G + K  E + +MK   L
Sbjct: 181 VGRLDDTVYFFEEMKSMSCE------PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y++L+  FC  +   +A    ++M   G  PN  +   +++  CK G + +A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M++  V  N  TY  L+DG C   ++   ++LF  M + G   +  SYN LI+G+ 
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K ++ AL L NEL  +GI+P ++ Y T   GL  + + E A  +  EMQ N + A+T 
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414

Query: 369 TYRTFIDG 376
            Y T +D 
Sbjct: 415 IYTTLMDA 422



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    D  +  F+ + S+   PD+ TY+ LINCFCK G++  G   
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + +S   PNVV++++L+   C E  + +A   +  ++  G  PN  TY +L++  C+
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L  EM     E+GV +  N VTY+ +IDGLC    + +A++LF +M    +
Sbjct: 286 IGNLSDAFRLANEML----EVGVEW--NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGV 339

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV----------------SSNV 232
            PN+ +Y +LIHGF  A + + A  LL E+  +G+QP+++                ++ V
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 233 IMNELCKNG----------------KMDNASR---LLDLMVQCDVRPNAFTYNTLMDGFC 273
           +MNE+ +NG                K  N +    LL+ M + D      T+  L+DG C
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 274 LTGKINRVKELFVSME-SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
               +++  + F  M    G + +   Y  +I+G CK  +V+ A +L+ ++  +G+ P  
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             Y +L  G  +      AL L  +M    +  D   Y + + G 
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGF 564



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P    +  L +    +G +      F ++ R    P   +   L+       +       
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G +P V TYN +I+ + + G    A  LF+EM       G++  P+TVTY+ +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR----GLI--PDTVTYNSM 174

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG  K G +D     F +MK  +  P+V+TY SLI+ FC +    +      EM   G+
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PNVVS + +++  CK   M  A +    M +    PN FTY +L+D  C  G ++    
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M  +G + +  +Y  LI+G C  + ++EA  L+ ++   G+ P + +YN L HG  
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +  +RAL+L  E++G  +  D   Y TFI GLC
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 42/361 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K       +  +  +  +G  P+ +TY+ L++  CK+G +S  F +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      NVVT+T+LI GLC   R+ EA  LF K+   G  PN+ +YN LI+G  +
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL L  E+       G   +P+ + Y   I GLC    ++ AK +  +M+   +
Sbjct: 356 AKNMDRALELLNELK------GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMV----------------------------- 219
             N + YT+L+  +  + +  E   LL EM                              
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469

Query: 220 -------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                  D G+QPN      +++ LCK  ++  A+ L + M Q  + P+   Y +LMDG 
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN 529

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G +     L   M  +G K D  +Y  L+ G+ +  ++++A S   E+  + I P  
Sbjct: 530 LKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDE 589

Query: 333 V 333
           V
Sbjct: 590 V 590


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 194/385 (50%), Gaps = 35/385 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+LYTYS+LI C C+ G++ LGF   G +++  F    +TFT
Sbjct: 64  AAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 123

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +   L+ GLC    +  AL L + M +
Sbjct: 124 PLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPD 183

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    P+ VTYS II  LCK   +
Sbjct: 184 DGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAM 243

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L  M   GV+P+VV+ N++
Sbjct: 244 DKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLL 303

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKN +   A ++ + M +C ++P+  TY TL+ G+   G +  + +L   M   G 
Sbjct: 304 MDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGI 363

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + +   +NILI  Y K ++V+EA+ +++++  +G+ P  V Y T+   L ++ +   A+ 
Sbjct: 364 QPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVL 423

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
              +M    +  D   Y   I G C
Sbjct: 424 TLKQMINEGLTPDIIVYTPLIHGFC 448



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 6/278 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  +N ++    K    D   + +  +   G+ PD+ TYS +I   CK   +     
Sbjct: 189 PPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAME 248

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++++   PN  T+ S++ G C+  ++ EA      + + G EP+V+T N L++ LC
Sbjct: 249 VLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLC 308

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  +F  MT          KP+  TY  ++ G   +G + +  +L   M +  
Sbjct: 309 KNRRCTEARKIFNSMTKCG------LKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNG 362

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN   +  LI  +      +EA  +  +M  QG+ PN V+   +++ LCK G++ +A 
Sbjct: 363 IQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAV 422

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
             L  M+   + P+   Y  L+ GFC   K  + +EL 
Sbjct: 423 LTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 16/304 (5%)

Query: 82  VTFTSLIKGLCAESRIVEAAAL--FTKLKAFGCE---PNVITYNTLINGLCRTGHTIVAL 136
            T   L + L   +R   AAA+  + ++   G +   PN+ TY+ LI   CR G     L
Sbjct: 45  ATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGR----L 100

Query: 137 NL-FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL-QMKYENLNPNVVT 194
           +L F  + N    I   F+   +T++ ++ GLC +     A ++ L +M      PNV +
Sbjct: 101 DLGFAALGN---VIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFS 157

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T L+ G C  N   EA  LL  M D G    P+VV  N ++N   K G  D A      
Sbjct: 158 CTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHE 217

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+  TY++++   C    +++  E+  +M   G   +  +YN +++GYC + +
Sbjct: 218 MFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQ 277

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + EA+     +   G++P VVT N L   L + R+   A K+F  M    +  D  TY T
Sbjct: 278 LTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCT 337

Query: 373 FIDG 376
            + G
Sbjct: 338 LLQG 341



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 3/201 (1%)

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PN+ TY+ LI   C A   +     L  ++ +G +   ++   ++  LC + +  +
Sbjct: 78  DEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 137

Query: 246 ASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSYNI 302
           A  + L  M Q    PN F+   L+ G C   +     EL   M   G  C  D   YN 
Sbjct: 138 AMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT 197

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +ING+ K  + ++A + Y+E+  +GI P VVTY+++   L + +  ++A+++   M  N 
Sbjct: 198 VINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           V  +  TY + + G C   Q+
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQL 278


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K K  D    + +++   G+ P+  TY+ LI+ +   G       +
Sbjct: 186 PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 245

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+V    S +  LC   RI EA  +F  +   G +P+VI+Y  L++G   
Sbjct: 246 FKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYAT 305

Query: 129 TGHTIVALNLFKEMT---------------NGNGEIGVVFK--------------PNTVT 159
            G      NLF  M                N    +G++ K              P+ +T
Sbjct: 306 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIIT 365

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +S +I   C+ G +D A E F  M    + P+   Y+ LI G C+  D  +AK L+ +M+
Sbjct: 366 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 425

Query: 220 DQGVQPNVVSS-NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            +G+ P  +     I+N LCK G++     ++DL++    RPN  T+N+L+DG+CL G +
Sbjct: 426 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 485

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L  SMES+G + D ++YN L++GYCK+  +++AL+L+ ++  K +  T V+YN +
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HGLF+ R+   A ++F EM  + +A    TY T + GLC
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 585



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 42/408 (10%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P + ++NIL+ C  + +  D  L +F RL   GL PD+++Y+ LI+ F K G+V    
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 173

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F ++      PNVVT++SLI GLC    + +A  +  ++   G  PN +TYN LI+G 
Sbjct: 174 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 233

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             +G    ++ +FKEM++       +  P+    +  +  LCK G + +A+++F  M  +
Sbjct: 234 STSGMWKESVRVFKEMSSS------LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 287

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+V++Y +L+HG+  A        L   MV +GV P+    N ++N   + G MD +
Sbjct: 288 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 347

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + + M +  V P+  T++T++  FC  G+++   E F  M   G   D   Y+ LI G
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407

Query: 307 YCKNKEVEEALSLYNELPFKGI------------------------------------KP 330
            C  +++ +A  L +++  KGI                                    +P
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 467

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++T+N+L  G   +   + A+ L   M+   V  D  TY T +DG C
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 515



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 51/384 (13%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIG---LFPDLYTYSILINCF 56
           +P P    N LL  LA+              + LFKR++        P +YTY+ILINC+
Sbjct: 69  APAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCY 128

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
            +  +  LG  +FGR+LR+                                   G  P+V
Sbjct: 129 RRARRPDLGLPVFGRLLRT-----------------------------------GLGPDV 153

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            +YN LI+G  + G    A +LF +M     E G++  PN VTYS +I+GLCK   +DKA
Sbjct: 154 FSYNALIDGFSKEGEVDKAHDLFYKME----EQGIM--PNVVTYSSLINGLCKTKEMDKA 207

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +  QM    + PN +TY  LIHG+  +  W E+  +  EM    + P+V + N  M  
Sbjct: 208 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 267

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK+G++  A  + D MV    +P+  +Y  L+ G+   G I  +  LF  M   G   D
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              +N LIN Y +   ++++L ++ ++  +G+ P ++T++T+      + + + A++ F 
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 357 EMQGNDVAADTCTYRTFIDGLCVR 380
            M    V  DT  Y   I G C R
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNR 411



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  LL   A       + +LF  +   G+ PD + ++ LIN + ++G +    ++
Sbjct: 291 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    P+++TF+++I   C   R+ +A   F  +   G  P+   Y+ LI G C 
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L  +M +       +  P    ++ II+ LCKEG V + K++   + +   
Sbjct: 411 RRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQ 465

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++T+ SL+ G+C   +  EA GLL  M   GV+P++ + N +++  CK+G++D+A  
Sbjct: 466 RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALT 525

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   V   + +YN ++ G     +    KE+F  M   G      +Y  ++ G C
Sbjct: 526 LFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLC 585

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    +     
Sbjct: 586 RNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTIL 645

Query: 369 TYRTFIDGL 377
           TYR  I  L
Sbjct: 646 TYRVMITNL 654



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 7/360 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    FN L+   A+    D  L +F+ +   G+ PD+ T+S +I+ FC++G++      
Sbjct: 326 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK 385

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY-NTLINGLC 127
           F  ++ +   P+   ++ LI+G C    +V+A  L + + + G  P  I +  ++IN LC
Sbjct: 386 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 445

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G      ++  ++    G+     +PN +T++ ++DG C  G + +A  L   M+   
Sbjct: 446 KEGRVAEGKDVV-DLIIHTGQ-----RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++ TY +L+ G+C     ++A  L  +M+ + V    VS N+I++ L +  +   A 
Sbjct: 500 VEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 559

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   M++  +  +  TY T++ G C     +    L   + SM  K D  ++NI+I   
Sbjct: 560 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K    +EA  L+  +   G+ PT++TY  +   L +    E A  LF  M+ +    D+
Sbjct: 620 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 679



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 9/352 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPD-LYTYSILINCFCKMGQVSLGF 66
           PP  + ++ L+      +       L   + S G+ P  +  ++ +IN  CK G+V+ G 
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   I+ +   PN++TF SL+ G C    + EA  L   +++ G EP++ TYNTL++G 
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    AL LF++M +    +       +V+Y+II+ GL +      AKE+F +M   
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTL------TSVSYNIILHGLFQARRTIVAKEMFHEMIES 568

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  ++ TY +++ G C  N  +EA  LL ++    V+ ++++ N+++  + K G+   A
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   +    + P   TY  ++              LF SME   C  D    N +I  
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA-LKLFVE 357
                EV +A +  +++  KGI P   T + L + LF +    R  +KL  E
Sbjct: 689 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIY-LFSVNGKYREYIKLLPE 739



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 87/160 (54%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P + + N+++N   +  + D    +   +++  + P+ F+YN L+DGF   G++++  +L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  ME  G   +  +Y+ LING CK KE+++A  +  ++   G++P  +TYN L HG   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               + ++++F EM  + +  D     +F+  LC   +++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK 275


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 196/378 (51%), Gaps = 9/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R    S P + ++N L+    +        +  +++ + G+ PD+ T +IL++  CK G
Sbjct: 159 IRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDG 218

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     I   +  +   P+V+T+ S+I  LC   ++VEAA +   LK   C P+++T+N
Sbjct: 219 DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFN 275

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL++G C+ G    AL + +EM   N        P+ +TY+I+++GLC+ G V  A  L 
Sbjct: 276 TLLDGFCKAGMLPRALEVLEEMCREN------ILPDVITYTILVNGLCRVGQVQVAFYLL 329

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++  +   P+V+ YTSL+ G C + +  EA  L+ EM  +G +  VV  + +++  C+ 
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  +L  MV  ++ P  FTYN ++ G    G I++   L   + + G   D  +Y
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+G CK   V EA  L +E+  +G  P  VT  ++  GL  + + + A  L VEM  
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509

Query: 361 NDVAADTCTYRTFIDGLC 378
              A +   Y + IDGLC
Sbjct: 510 KRHAPNVVVYTSLIDGLC 527



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 205/398 (51%), Gaps = 28/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  FN+L+  L K+ + D  + LF+ + S  + P++ TY+ +I+  CK G +     +
Sbjct: 95  PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAREL 154

Query: 69  FGRILRSC--FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              ++R     AP++VT+ +LI      SRI EA A   K+KA G  P+V+T N L++G+
Sbjct: 155 LEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGI 214

Query: 127 CRTGHTIVALNLFKEMTNGNG---------------------EIGVVFK-----PNTVTY 160
           C+ G    AL +   M                          E   + K     P+ VT+
Sbjct: 215 CKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTF 274

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + ++DG CK G + +A E+  +M  EN+ P+V+TYT L++G C       A  LL E+V 
Sbjct: 275 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 334

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           QG  P+V++   +++ LCK+G+++ A +L+  M     R     Y++L+ G+C  G +++
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            +E+   M S+      F+YNI++ G  K+  + +A+SL ++L  +G  P VVTYNTL  
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 454

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  +   A  L  EM       +  T  + + GLC
Sbjct: 455 GLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN LL    K       L + + +    + PD+ TY+IL+N  C++GQV + F +
Sbjct: 269 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 328

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I+R  + P+V+ +TSL+ GLC    I EA  L  ++   GC   V+ Y++L++G CR
Sbjct: 329 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  +  EM + N        P   TY+I++ GL K+G + KA  L   +     
Sbjct: 389 AGNVHKAREILAEMVSIN------MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G C AN   EA  L  EM  +G  PN V+   ++  LC+ G++D+A  
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M +    PN   Y +L+DG C + +++    +  +M   G   DDF+Y  LI    
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               V EA+++Y+E+  +G  P   T  TL
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 181/340 (53%), Gaps = 11/340 (3%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D+++Y+ L++   K G       ++  +L S  +PN+VTF  LI+G C   + + A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
                 L  F   P+V  +N LI+GL + G+   A+ LF+ M +         KP  VTY
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR------VKPEIVTY 135

Query: 161 SIIIDGLCKEGFVDKAKELFLQM--KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           + +I GLCK G ++KA+EL  +M  K     P++VTY +LI+ F  A+   EA     +M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G+ P+V++ N++++ +CK+G ++ A  +LD M      P+  TYN+++   C+ GK+
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKV 255

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               E+   +++M C  D  ++N L++G+CK   +  AL +  E+  + I P V+TY  L
Sbjct: 256 VEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +GL  + Q + A  L  E+       D   Y + +DGLC
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 352



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N LL  L K+ H+     ++K L   G  P+L T+ ILI   CK GQ         
Sbjct: 27  VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +     AP+V  F  LI GL  +    +A  LF  +++   +P ++TYNT+I+GLC++G
Sbjct: 87  ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSG 146

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  L +EM    G+      P+ VTY+ +I+   +   + +A     +MK   +NP
Sbjct: 147 NLEKARELLEEMIRKGGKSA----PDIVTYNTLINAFYRASRIREACAFREKMKAAGINP 202

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+T   L+ G C   D  EA  +L  M   G  P+V++ N I++ LC  GK+  A+ +L
Sbjct: 203 DVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL 262

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M  C   P+  T+NTL+DGFC  G + R  E+   M       D  +Y IL+NG C+ 
Sbjct: 263 KTM-SCS--PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V+ A  L  E+  +G  P V+ Y +L  GL +  + E A KL  EM           Y
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379

Query: 371 RTFIDGLC 378
            + + G C
Sbjct: 380 SSLVSGYC 387



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 11/313 (3%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           +  +V ++  L+  L           ++  L   GC PN++T+  LI G C+ G  + AL
Sbjct: 23  YKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRAL 82

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
              + +     E  V   P+   ++++I GL K+G  D+A +LF  M+   + P +VTY 
Sbjct: 83  EFLRALD----EFSVA--PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYN 136

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQ--PNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           ++I G C + +  +A+ LL EM+ +G +  P++V+ N ++N   +  ++  A    + M 
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMK 196

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+  T N L+ G C  G +    E+   M+  G   D  +YN +I+  C   +V 
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVV 256

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA  +   L      P +VT+NTL  G  +     RAL++  EM   ++  D  TY   +
Sbjct: 257 EAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 313

Query: 375 DGLCVRPQVRFTY 387
           +GLC   QV+  +
Sbjct: 314 NGLCRVGQVQVAF 326



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 2/173 (1%)

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G + +V S N +++ L K+G      ++   ++     PN  T+  L+ G C  G+  R
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             E   +++      D + +N+LI+G  K+   ++A+ L+  +    +KP +VTYNT+  
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 341 GLFEIRQAERALKLFVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           GL +    E+A +L  EM  +G   A D  TY T I+      ++R   A R+
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 35/125 (28%)

Query: 289 ESMGCKHDDFSYN-----------------------------------ILINGYCKNKEV 313
           E  G KHD  SYN                                   ILI G CK  + 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             AL     L    + P V  +N L HGLF+    ++A+KLF  M+ + V  +  TY T 
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 374 IDGLC 378
           I GLC
Sbjct: 139 ISGLC 143


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 202/378 (53%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  L ++      L +F  +  +G+ P+  TY+ +I+   K G +  G
Sbjct: 189 APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAG 248

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  ++L     PNVVT+  L+ GLC   R+ E  AL  ++ +    P+  TY+ L +G
Sbjct: 249 FRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDG 308

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L RTG +   L+LF E       +G        T SI+++GLCK+G V KAK++F  + +
Sbjct: 309 LTRTGESQTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAKQVFEMLVH 362

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   D   A  +  +M  + ++P+ ++ N ++N LCK   +  
Sbjct: 363 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 422

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  M +  V P+  T+NTL+D +   G++ +   +   M+  G K D  S+  ++ 
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++ +K + P    YN++     E    E+AL L  +M+ + V+A
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSA 542

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   + GLC   Q+
Sbjct: 543 SIVTYNLLLKGLCRSSQI 560



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 7/381 (1%)

Query: 4   MHPSPPP-VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P V ++N+LL  L +    D   +L   + S  + PD +TYSIL +   + G+ 
Sbjct: 256 LHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F   L+        T + L+ GLC + ++ +A  +F  L   G  P  + YNTL
Sbjct: 316 QTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTL 375

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING C+      A  +F++M + +       +P+ +TY+ +I+GLCK   V KA++L ++
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   ++P+V T+ +LI  +  A    +   +L +M  +G++ +V+S   ++   CKNGK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +LD M+  DV PNA  YN+++D +  +G   +   L   M++ G      +YN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G C++ +++EA  L   L  +G++P VV+YNT+          ++AL+L  EM    
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +     T  T +  L    +V
Sbjct: 610 IRPTLRTCHTLVSALASAGRV 630



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 9/375 (2%)

Query: 7   SP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP P +SS N+LL  L     +  V + F  L + G  PD + ++ ++      G + + 
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176

Query: 66  FVIFGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             +  R+ RS  A  P+  ++  +I GL    +  +A  +F ++   G  PN ITYNT+I
Sbjct: 177 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI 236

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G       L  +M +         KPN VTY++++ GLC+ G +D+ + L  +M
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGP------KPNVVTYNVLLSGLCRTGRMDETRALMDEM 290

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              ++ P+  TY+ L  G     +      L  E + +GV     + ++++N LCK+GK+
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A ++ +++V   + P    YNTL++G+C    +     +F  M+S   + D  +YN L
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING CK + V +A  L  E+   G+ P+V T+NTL        Q E+   +  +MQ   +
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 364 AADTCTYRTFIDGLC 378
            +D  ++ + +   C
Sbjct: 471 KSDVISFGSVVKAFC 485



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   +++IL   L +     T+LSLF      G+    YT SIL+N  CK G+V+ 
Sbjct: 293 HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  ++ +   P  V + +LI G C    +  A  +F ++K+    P+ ITYN LIN
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 125 GLCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-----------KP 155
           GLC+      A +L  EM                      G++   F           K 
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + +++  ++   CK G + +A  +   M Y+++ PN   Y S+I  +  + D  +A  L+
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M + GV  ++V+ N+++  LC++ ++D A  L+  +    +RP+  +YNT++   C  
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G  ++  EL   M   G +    + + L++       V +   LY ++  K ++P+   Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +           +   L  EM    +A D
Sbjct: 653 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 146/297 (49%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ +   G
Sbjct: 395 MKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F +   + +     +V++F S++K  C   +I EA A+   +      PN   YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+    +G T  AL L ++M N           + VTY++++ GLC+   +D+A+EL 
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSG------VSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             ++ + L P+VV+Y ++I   C+  D ++A  LL EM   G++P + + + +++ L   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G++ +   L   M+  +V P++  Y  ++D +      ++V  L   M   G   DD
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 29/397 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             + + G+ P++ TY+ +++ +C  G+V     I  
Sbjct: 221 VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R    P+  T+ SLI G+C + R+ EA+ +F ++   G  P+ + YNTLI+G C  G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340

Query: 131 HTIVALNLFKEM---------TNGNGEIGVVF--------------------KPNTVTYS 161
           +  +A     EM         +  N  I  +F                     P+ +TY+
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+G C+     KA  L  +M    + P   TYTSL+H     N   EA  L  ++  +
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV P+V+  N +++  C N  +  A  LL  M +  V P+  T+NT+M G C  GK+   
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +ELF  M+  G K D  S+N LI+GY +  ++++A  + NE+   G  PTV+TYN L  G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L + ++ + A +L  EM    +  D  TY T I+G+ 
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N LL    K    +    L+  +  + +   +YT++I+IN  CK G++      
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +  S   PN+VT+ +++ G C+  R+  A A+ T +K    EP+  TY +LI+G+C+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F+EM           +P+ V Y+ +IDG C +G +D A     +M  + +
Sbjct: 304 QGRLEEASKIFEEMVQKG------LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P + TY SLIH        +EA+ ++ E+ ++G+ P+ ++ N+++N  C+      A  
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P   TY +L+       ++    +LF  + S G   D   +N LI+G+C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  V+ A  L  ++    + P  VT+NT+  G     + E A +LF EM+   +  D  
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           ++ T I G   R  ++  +  R
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVR 559



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 8/380 (2%)

Query: 6   PSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           PSP P +      LG    N   +    L    + +G F     +  LI   C M +   
Sbjct: 111 PSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLG-FKSSIVFDYLIKSCCDMNRADE 169

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F  F  +      P + T  SL+      +R   A  L+ ++     + +V T+N +IN
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+ G    A +    M       GV  KPN VTY+ I+ G C  G V+ A  +   MK
Sbjct: 230 VLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+  TY SLI G C      EA  +  EMV +G++P+ V  N +++  C  G +D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            AS   D M++  + P   TYN+L+    +  + +  + +   ++  G   D  +YNILI
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NGYC+    ++A  L++E+   GIKPT  TY +L H L +  + + A  LF ++    V 
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            D   +   IDG C    V+
Sbjct: 464 PDVIMFNALIDGHCSNSNVK 483



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L+K         LFK++ S G+ PD+  ++ LI+  C    V   F +
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFEL 488

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+ VTF ++++G C E ++ EA  LF ++K  G +P+ I++NTLI+G  R
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSR 548

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  EM +        F P  +TY+ ++ GLCK    D A+EL  +M  + +
Sbjct: 549 RGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 189 NPNVVTYTSLIHGFCHANDWNEAK 212
            P+  TY +LI G    N  +E K
Sbjct: 603 TPDDTTYFTLIEGIAKVNIPDENK 626



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 60/121 (49%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN ++    +    +    LF  +   G+ PD  +++ LI+ + + G +   F 
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L + F P V+T+ +L++GLC       A  L  ++ + G  P+  TY TLI G+ 
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 128 R 128
           +
Sbjct: 618 K 618


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +S+FN LL  L K         L  ++   G+ P+L+TY++ I   C+ G++     + G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     P+V+T+ +LI GLC  S+  EA     K+   G EP+  TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 131 HTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
              +A  +  +   NG       F P+  TY  +IDGLC EG  ++A  LF +   + + 
Sbjct: 336 MVQLAERIVGDAVFNG-------FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV+ Y +LI G  +     EA  L  EM ++G+ P V + N+++N LCK G + +A  L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           + +M+     P+ FT+N L+ G+    K+    E+   M   G   D ++YN L+NG CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             + E+ +  Y  +  KG  P + T+N L   L   R+ + AL L  EM+   V  D  T
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568

Query: 370 YRTFIDGLC 378
           + T IDG C
Sbjct: 569 FGTLIDGFC 577



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 192/381 (50%), Gaps = 9/381 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L KN  +        ++ + GL PD YTY+ LI  +CK G V L   I
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G  + + F P+  T+ SLI GLC E     A ALF +    G +PNVI YNTLI GL  
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM+    E G++  P   T++I+++GLCK G V  A  L   M  +  
Sbjct: 404 QGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+  LIHG+        A  +L  M+D GV P+V + N ++N LCK  K ++   
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+    PN FT+N L++  C   K++    L   M++     D  ++  LI+G+C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 309 KNKEVEEALSLYNEL--PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           KN +++ A +L+ ++   +K +  +  TYN + H   E      A KLF EM    +  D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYK-VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 367 TCTYRTFIDGLCVRPQVRFTY 387
             TYR  +DG C    V   Y
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGY 657



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L  + ++D    ++ R+   G+ PD+Y+++I +  FCK  +      +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       NVV + +++ G   E+   E   LF K+ A G    + T+N L+  LC+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  ++     + GV+  PN  TY++ I GLC+ G +D A  +   +  +  
Sbjct: 229 KGDVKECEKLLDKVI----KRGVL--PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY +LI+G C  + + EA+  L +MV++G++P+  + N ++   CK G +  A R
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++   V     P+ FTY +L+DG C  G+ NR   LF      G K +   YN LI G  
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR---------------------- 346
               + EA  L NE+  KG+ P V T+N L +GL ++                       
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462

Query: 347 -------------QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                        + E AL++   M  N V  D  TY + ++GLC
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            +++F+R++     P +++Y+ +++     G       ++ R+      P+V +FT  +K
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C  SR   A  L   + + GCE NV+ Y T++ G            LF +M      +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            +       T++ ++  LCK+G V + ++L  ++    + PN+ TY   I G C   + +
Sbjct: 215 CL------STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  ++  +++QG +P+V++ N ++  LCKN K   A   L  MV   + P+++TYNTL+
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G+C  G +   + +       G   D F+Y  LI+G C   E   AL+L+NE   KGIK
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+ YNTL  GL        A +L  EM    +  +  T+   ++GLC
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 153/322 (47%), Gaps = 6/322 (1%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           + + G+V     +F R+      P V ++ +++  L       +A  ++ +++  G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V ++   +   C+T     AL L   M++   E+      N V Y  ++ G  +E F  +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM------NVVAYCTVVGGFYEENFKAE 199

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
             ELF +M    ++  + T+  L+   C   D  E + LL +++ +GV PN+ + N+ + 
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LC+ G++D A R++  +++   +P+  TYN L+ G C   K    +     M + G + 
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D ++YN LI GYCK   V+ A  +  +  F G  P   TY +L  GL    +  RAL LF
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            E  G  +  +   Y T I GL
Sbjct: 380 NEALGKGIKPNVILYNTLIKGL 401



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 7/326 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  L+          L   ++  GL P++ T++IL+N  CKMG VS    +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++   + P++ TF  LI G   + ++  A  +   +   G +P+V TYN+L+NGLC+
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T      +  +K M     E G    PN  T++I+++ LC+   +D+A  L  +MK +++
Sbjct: 509 TSKFEDVMETYKTMV----EKGCA--PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNAS 247
           NP+ VT+ +LI GFC   D + A  L  +M +   V  +  + N+I++   +   +  A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L   MV   + P+ +TY  ++DGFC TG +N   +  + M   G      +   +IN  
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVV 333
           C    V EA  + + +  KG+ P  V
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 6/295 (2%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +   +K    + ++ EA  +F ++  + CEP V +YN +++ L  +G+   A  ++  M 
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
           +          P+  +++I +   CK      A  L   M  +    NVV Y +++ GF 
Sbjct: 139 DRG------ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             N   E   L  +M+  GV   + + N ++  LCK G +    +LLD +++  V PN F
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN  + G C  G+++    +   +   G K D  +YN LI G CKN + +EA     ++
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +G++P   TYNTL  G  +    + A ++  +   N    D  TYR+ IDGLC
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 44/298 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+  L K         L K + S G FPD++T++ILI+ +    ++     I
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L +   P+V T+ SL+ GLC  S+  +    +  +   GC PN+ T+N L+  LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
                 AL L +EM N +        P+ VT+  +IDG CK G +D A  LF +M+    
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597

Query: 185 ---------------YENLN-----------------PNVVTYTSLIHGFCHANDWNEAK 212
                           E LN                 P+  TY  ++ GFC   + N   
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
             L+EM++ G  P++ +   ++N LC   ++  A+ ++  MVQ  + P A   NT+ D
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 8/251 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
           AL +F  M     E+G  FK    TY  +I+ L   G  +  +E+ + M+ EN+  +++ 
Sbjct: 23  ALEMFNSMRK---EVG--FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLE 76

Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y   +  +       EA  +   M     +P V S N IM+ L  +G  D A ++   
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+ +++   M  FC T + +    L  +M S GC+ +  +Y  ++ G+ +   
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             E   L+ ++   G+   + T+N L   L +    +   KL  ++    V  +  TY  
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256

Query: 373 FIDGLCVRPQV 383
           FI GLC R ++
Sbjct: 257 FIQGLCQRGEL 267



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)

Query: 175 KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           KA E+F  M+ E      + TY S+I    +   +   + +L++M  + V  +++    +
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYV 80

Query: 234 --MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
             M    + GK+  A  + + M   D  P  F+YN +M     +G  ++  ++++ M   
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G   D +S+ I +  +CK      AL L N +  +G +  VV Y T+  G +E       
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +LF +M  + V+    T+   +  LC +  V+
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 190/367 (51%), Gaps = 9/367 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L+    KN   D  L  F R    G      + + ++    K G++ +   ++  ++R
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
                NVVTF  +I GLC   +  +A  +   +KA+G  P+VITYNT+I+G C+ G    
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  L KEM      +     PN +T++I+IDG C++  V  AK++F +M+ + L PNVVT
Sbjct: 283 ADALLKEM------VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y SLI+G C     +EA GL  +M   G++PNVV+ N ++N  CK   +  A  +LD + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  + PN  T+NTL+D +   G+++    L   M   G   +  +YN LI G+C+   V+
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVEMQGNDVAADTCTYR 371
           EA  L  E+   G+K  +VTYN L   L    E R+A R L     M+     A+  TY 
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 372 TFIDGLC 378
             I G C
Sbjct: 517 VLIKGFC 523



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 195/368 (52%), Gaps = 9/368 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N +L  L K      V S++K +    +  ++ T+ ++IN  CK+G+      +   +
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               F+P+V+T+ ++I G C   ++ +A AL  ++ A    PN IT+N LI+G CR  + 
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +F+EM           +PN VTY+ +I+GLC  G +D+A  L  +M    L PNV
Sbjct: 316 TAAKKVFEEMQRQG------LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI+GFC      EA+ +L ++  +G+ PNV++ N +++   K G+MD+A  L  +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   V PN  TYN L+ GFC  G +   ++L   ME  G K D  +YNIL++  CK  E
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 313 VEEALSLYNELPF---KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             +A+ L +E+     KG +  +VTYN L  G     + E A +L  EM    +  +  T
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 370 YRTFIDGL 377
           Y    D +
Sbjct: 550 YDILRDEM 557



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 17/404 (4%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF--PDLYTYSILINCFCKMG 60
           H+  +    +    LL   AKN HY    ++F  L+ +G +   +     +L+  + K G
Sbjct: 115 HLLANAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNG 173

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++ L    F R     F  + ++   ++  L  E RI    +++ ++       NV+T++
Sbjct: 174 EMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFD 233

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +INGLC+ G    A ++ ++M          F P+ +TY+ IIDG CK G + KA  L 
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWG------FSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PN +T+  LI GFC   +   AK +  EM  QG+QPNVV+ N ++N LC N
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+D A  L D M    ++PN  TYN L++GFC    +   +E+   +   G   +  ++
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+ Y K   +++A  L + +   G+ P V TYN L  G       + A KL  EM+G
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR--------FTYARRKGNSGN 396
           N + AD  TY   +D LC + + R         T   +KG   N
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 178/337 (52%), Gaps = 9/337 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F++++  L K   +     + + + + G  P + TY+ +I+ +CK G++     +  
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++     PN +TF  LI G C +  +  A  +F +++  G +PNV+TYN+LINGLC  G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L  +M+      G+  KPN VTY+ +I+G CK+  + +A+E+   +    L P
Sbjct: 349 KLDEALGLQDKMS------GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV+T+ +LI  +  A   ++A  L   M+D GV PNV + N ++   C+ G +  A +L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNILINGY 307
             M    ++ +  TYN L+D  C  G+  +   L   M   E  G + +  +YN+LI G+
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGF 522

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           C   ++EEA  L NE+  KG+ P   TY+ L   + E
Sbjct: 523 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 559



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 9/236 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L  N   D  L L  +++ +GL P++ TY+ LIN FCK   +     +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I +   APNV+TF +LI       R+ +A  L + +   G  PNV TYN LI G CR
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---KY 185
            G+   A  L KEM  GNG      K + VTY+I++D LCK+G   KA  L  +M   + 
Sbjct: 452 EGNVKEARKLAKEM-EGNG-----LKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +    N+VTY  LI GFC+     EA  LL EM+++G+ PN  + +++ +E+ + G
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 36/199 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K K       +   +   GL P++ T++ LI+ + K G++   F++
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L +   PNV T+  LI G C E  + EA  L  +++  G + +++TYN L++ LC+
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486

Query: 129 TGHTIVALNLFKEMT----------------------------------NGNGEIGVVFK 154
            G T  A+ L  EMT                                  N   E G++  
Sbjct: 487 KGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI-- 544

Query: 155 PNTVTYSIIIDGLCKEGFV 173
           PN  TY I+ D + ++GF+
Sbjct: 545 PNRTTYDILRDEMMEKGFI 563


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 195/375 (52%), Gaps = 7/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +  +++  L ++   +    +F+ + S+G+ P+   Y+ LI    + G+      I
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+V+ + S+I GLC   ++ EA     ++   G +PNV TY  LI+G C+
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G   VA   FKEM      +G    PN V  + +IDG CKEG   +A  +F  M   ++
Sbjct: 564 SGEMQVADRYFKEM------LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V TY++LIHG         A  LL E +++G+ P+V + N I++  CK G +  A +
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M Q  + PN  TYN L++G C  G+I R +ELF  +   G  H+  +Y  +I+GYC
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYC 737

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  + +A  L++E+  KG+ P    Y+ L  G  +    E+AL LF+E      A+ T 
Sbjct: 738 KSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS-TS 796

Query: 369 TYRTFIDGLCVRPQV 383
           +    +DG C   +V
Sbjct: 797 SLNALMDGFCKSGKV 811



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  + K    +   +L   +  +G+ PD  TY+ +I  + K    S    +   +
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +S   P   T   +I GLC    I +A+ +F  + + G +PN + Y TLI G  + G  
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ + K M       GV  +P+ + Y+ +I GLCK   +++AK+  ++M    L PNV
Sbjct: 498 QEAVRILKVMDKK----GV--QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY +LIHG+C + +   A     EM+  G+ PN V    +++  CK G    A+ +   
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   V P+  TY+ L+ G    GK+    EL       G   D F+YN +I+G+CK   
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + +A  L+  +  KGI P ++TYN L +GL +  + ERA +LF  + G  +A +  TY T
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 373 FIDGLC 378
            IDG C
Sbjct: 732 IIDGYC 737



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 191/405 (47%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++G L +    D    L K ++  GL  D++TYSILI+ F K  + +   ++
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P  V +T+LI G   +    EA  +  ++ A G + N+ TYN L+ G+C+
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS--------------------------- 161
            G    A  L  EM      I V  KP+T TY+                           
Sbjct: 389 FGDMEKADALLNEM------IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442

Query: 162 --------IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                   +II+GLC+ G ++ A  +F  M    + PN V YT+LI G      + EA  
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVR 502

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L  M  +GVQP+V+  N ++  LCK+ KM+ A   L  M++  ++PN +TY  L+ G+C
Sbjct: 503 ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYC 562

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G++      F  M   G   +D     LI+GYCK     EA S++  +  + + P V 
Sbjct: 563 KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVR 622

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TY+ L HGL    + + A++L  E     +  D  TY + I G C
Sbjct: 623 TYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFC 667



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K++  +        +   GL P++YTY  LI+ +CK G++ +    
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    APN V  T+LI G C E    EA ++F  +      P+V TY+ LI+GL R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  E      E G+V  P+  TY+ II G CK+G + KA +L   M  + +
Sbjct: 634 NGKLQGAMELLSEFL----EKGLV--PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN++TY +LI+G C A +   A+ L   +  +G+  N V+   I++  CK+G +  A R
Sbjct: 688 SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    V P++F Y+ L+DG    G   +   LF+     G      S N L++G+C
Sbjct: 748 LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFC 806

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V EA  L  ++  K +KP  VTY  L     +    + A + FV+MQ  ++  +  
Sbjct: 807 KSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNAL 866

Query: 369 TYRTFIDG 376
           TY   + G
Sbjct: 867 TYTALLSG 874



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L   +   G  P L TY+++I   C+ G+V   F +   + +     +V T++ LI G  
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            + R  EA  +  ++ + G +P  + Y  LI+G  R G +  A  + +EM      +   
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM------LARG 371

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            K N  TY+ ++ G+CK G ++KA  L  +M    + P+  TY ++I G+    + +  K
Sbjct: 372 VKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVK 431

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL EM    + P   +  +I+N LC++G +++ASR+ ++MV   V+PNA  Y TL+ G 
Sbjct: 432 DLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGH 491

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G+      +   M+  G + D   YN +I G CK++++EEA     E+  +G+KP V
Sbjct: 492 VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TY  L HG  +  + + A + F EM G  +A +       IDG C
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 201/397 (50%), Gaps = 21/397 (5%)

Query: 2    RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
            R +HP    V +++ L+  L +N      + L       GL PD++TY+ +I+ FCK G 
Sbjct: 615  RSVHPD---VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 62   VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
            +   F +   + +   +PN++T+ +LI GLC    I  A  LF  +   G   N +TY T
Sbjct: 672  IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 122  LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
            +I+G C++G+   A  LF EMT      GV   P++  YS +IDG  KEG  +KA  LFL
Sbjct: 732  IIDGYCKSGNLSKAFRLFDEMTLK----GV--PPDSFVYSALIDGCRKEGNTEKALSLFL 785

Query: 182  QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            +   +    +  +  +L+ GFC +    EA  LL +MVD+ V+P+ V+  ++++  CK G
Sbjct: 786  ESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTG 844

Query: 242  KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             +  A +    M + ++ PNA TY  L+ G+ + G+ + +  LF  M +   + D  +++
Sbjct: 845  FLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWS 904

Query: 302  ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF--VEMQ 359
            ++I+ + K  +  + L L +++  KG   +    + L   L         LK+   +E Q
Sbjct: 905  VMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQ 964

Query: 360  GNDVAADTCT--YRTF-----IDGLC--VRPQVRFTY 387
            G +++  TC+   R F     +DG    ++  VRF +
Sbjct: 965  GLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKW 1001



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F +L+    K   +D  +S F      G    L   + L++   K  ++ L +  +  +L
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +    +V T+T LI          E   L  +++  GC P+++TYN +I GLCR G   
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L K++ +  G +  VF     TYSI+IDG  K+    +AK +  +M  + L P  V
Sbjct: 289 EAFEL-KKLMDKKGLVADVF-----TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT+LI GF    D  EA  +  EM+ +GV+ N+ + N ++  +CK G M+ A  LL+ M
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +   ++P+  TYN +++G+      +RVK+L   M+        ++  ++ING C++  +
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  ++  +   G+KP  V Y TL  G  +  + + A+++   M    V  D   Y + 
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 374 IDGLC 378
           I GLC
Sbjct: 523 IIGLC 527



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 12/300 (4%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V F  LI G   +    EA + F   K  G    ++  N L++ L +       L LF  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANK----LELFWR 222

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
             NG  E  V+   +  TY+ +I+   + G   + K L  +M+ +  +P++VTY  +I G
Sbjct: 223 FYNGMLEANVLH--DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGG 280

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C A + +EA  L   M  +G+  +V + +++++   K  +   A  +L+ M    ++P 
Sbjct: 281 LCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPG 340

Query: 262 AFTYNTLMDGFCL---TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
              Y  L+DGF     +G+  RVKE    M + G K + F+YN L+ G CK  ++E+A +
Sbjct: 341 HVAYTALIDGFMRQGDSGEAFRVKE---EMLARGVKLNLFTYNALVKGVCKFGDMEKADA 397

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L NE+   GIKP   TYN +  G  + +   R   L  EM+ +++     T    I+GLC
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC 457



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 145/352 (41%), Gaps = 40/352 (11%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++N L+  L K    +    LF  +   GL  +  TY+ +I+ +CK G +S  F +
Sbjct: 689  PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748

Query: 69   FGRILRSCFAPNVVTFTSLIKG----------------------------------LCAE 94
            F  +      P+   +++LI G                                   C  
Sbjct: 749  FDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKS 808

Query: 95   SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
             +++EA  L   +     +P+ +TY  LI+  C+TG    A   F +M   N        
Sbjct: 809  GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN------LM 862

Query: 155  PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            PN +TY+ ++ G    G   +   LF +M  +++ P+ VT++ +I       D  +   L
Sbjct: 863  PNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKL 922

Query: 215  LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
            + +M+ +G   +    +V+++ LC+   +    ++L+ + +  +  +  T +TL+  F  
Sbjct: 923  VDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHK 982

Query: 275  TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             GK++    +  SM       D    N LIN    + + E A     ++ ++
Sbjct: 983  AGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 9/255 (3%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
               SS N L+    K+        L + +    + PD  TY+ILI+  CK G +      
Sbjct: 793  ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  + +    PN +T+T+L+ G     R  E  ALF ++ A   EP+ +T++ +I+   +
Sbjct: 853  FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G  +  L L  +M    G +        V + ++ID LC++  V +  ++  +++ + L
Sbjct: 913  EGDHVKTLKLVDDMLKKGGNV-----SKNVCH-VLIDPLCRKEHVSEVLKVLEKIEEQGL 966

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            N ++ T ++L+  F  A   + A  +L  MV     P+    N ++N    +   +NA  
Sbjct: 967  NLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGD 1026

Query: 249  LLDLM---VQCDVRP 260
             L  M   V C VR 
Sbjct: 1027 FLKQMAWEVACQVRA 1041



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V +  LI G+     ++EA    +     G    ++  N ++++L K  K++   R  + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M++ +V  + +TY  L++     G     K L   ME  GC     +YN++I G C+  E
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+EA  L   +  KG+   V TY+ L  G  + ++   A  +  EM    +      Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 373 FIDGLCVRPQVRFTYARRKGNSGNTNR 399
            IDG             R+G+SG   R
Sbjct: 347 LIDGFM-----------RQGDSGEAFR 362


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 195/384 (50%), Gaps = 10/384 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           +R M P P  V+ +N ++            L + + +   G + P+ YTY  +I+ +CK+
Sbjct: 64  LRQM-PRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 60  GQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G+V     +F  +L +    P  V + +LI G C + ++  A     ++   G    V T
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L++ L   G    A  L +EM  G G       P+  TY+I+I+G CKEG V KA E
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEM-GGKG-----LAPDVFTYNILINGHCKEGNVKKALE 235

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M    +   VVTYTSLI+         E   L  E V +G++P++V  N ++N   
Sbjct: 236 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 295

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +G +D A  ++  M +  + P+  TYNTLM G CL G+++  ++L   M   G + D  
Sbjct: 296 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 355

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+GY    +V++AL + NE+  KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 356 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQ 382
             N +  D  TY + I+GL    +
Sbjct: 416 VENGITPDDSTYISLIEGLTTEDE 439



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 177/377 (46%), Gaps = 12/377 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     
Sbjct: 38  PLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALD 93

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLING 125
           I   +  R   APN  T+ ++I G C   R+ EA  +F ++   G  +P  + YN LI G
Sbjct: 94  IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 153

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C  G    AL     M     E GV       TY++++  L  +G   +A EL  +M  
Sbjct: 154 YCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALFMDGRGTEAYELVEEMGG 207

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L P+V TY  LI+G C   +  +A  +   M  +GV+  VV+   ++  L K G++  
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
             +L D  V+  +RP+   YN L++    +G I+R  E+   ME      DD +YN L+ 
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C    V+EA  L +E+  +GI+P +VTYNTL  G       + AL++  EM       
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387

Query: 366 DTCTYRTFIDGLCVRPQ 382
              TY   I GLC   Q
Sbjct: 388 TLLTYNALIQGLCKNGQ 404



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 19/365 (5%)

Query: 30  VLSLFKRLNSIGLFPDLY---------TYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           +LS      +  LF D++         T++I++   C  G+ +        +LR    PN
Sbjct: 16  LLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPN 71

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLF 139
            VT+ ++I G C+  R+  A  +  +++  G   PN  TY T+I+G C+ G    A+ +F
Sbjct: 72  AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            EM    GE+    KP  V Y+ +I G C +G +D A     +M    +   V TY  L+
Sbjct: 132 DEMLT-KGEV----KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 186

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           H         EA  L+ EM  +G+ P+V + N+++N  CK G +  A  + + M +  VR
Sbjct: 187 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 246

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
               TY +L+      G++    +LF      G + D   YN LIN +  +  ++ A  +
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
             E+  K I P  VTYNTL  GL  + + + A KL  EM    +  D  TY T I G  +
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366

Query: 380 RPQVR 384
           +  V+
Sbjct: 367 KGDVK 371



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 11/243 (4%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T T++I++  LC  G   +A EL  QM      PN VTY ++I GFC       A  ++ 
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 217 EMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCL 274
           EM ++G + PN  +   +++  CK G++D A ++ D ++ + +V+P A  YN L+ G+C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK++        M   G      +YN+L++    +    EA  L  E+  KG+ P V T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           YN L +G  +    ++AL++F  M    V A   TY + I  L  + QV+     F  A 
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 390 RKG 392
           R+G
Sbjct: 277 RRG 279


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 6/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+L+G   +    +  L  +K +    + PD+ ++S LI  F + G++      
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V +T +I G C    ++EA  +  ++ AFGC P+V+TYNTL+NGLC+
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM     E GV   P+  T++ +I G C++G ++KA + F  +  + L
Sbjct: 382 ERRLSDAEELLNEMK----ERGV--PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +LI G C   D  +A  L  +M  + + PN V+ +++++  C+ G++DNA  
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD MV   + PN  TYN+++ G+C +G +++ ++    M       D  +YN LI+GY 
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++ EA +L   +  + ++P  VTYN +  G       + A  ++ +M    +  D  
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRY 615

Query: 369 TYRTFIDGLCV 379
           TY + I+G  V
Sbjct: 616 TYMSMINGHVV 626



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SF+ L+G   +    D      + +   GL PD   Y+++I  FC+ G +     +
Sbjct: 297 PDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRV 356

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVT+ +L+ GLC E R+ +A  L  ++K  G  P++ T+ TLI+G CR
Sbjct: 357 RDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCR 416

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL  F  +++         +P+ VTY+ +IDG+C++G + KA EL+  M    +
Sbjct: 417 DGNIEKALQFFDTISDQR------LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI 470

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+ LI   C     + A   L EMV++G+ PN+++ N I+   C++G +    +
Sbjct: 471 FPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQ 530

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M    V P+  TYNTL+ G+   GK++    L   ME+   + D  +YN++I+G+ 
Sbjct: 531 FLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS 590

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            +  ++EA  +Y ++  +GI+P   TY ++ +G      ++++ +L  EM    +A D
Sbjct: 591 VHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N +L  L +N  +D    +F+ +++ G+ PD+ ++++LI  FC+ G++      
Sbjct: 227 PGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRF 286

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +      P+VV+F+ LI        +  AA    +++ FG  P+ + Y  +I G CR
Sbjct: 287 YKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCR 346

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFK--PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            G  + AL +  EM        V F   P+ VTY+ +++GLCKE  +  A+EL  +MK  
Sbjct: 347 AGLMLEALRVRDEM--------VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P++ T+T+LIHG+C   +  +A      + DQ ++P++V+ N +++ +C+ G +  A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           + L D M   ++ PN  TY+ L+D  C  G+++        M + G   +  +YN +I G
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC++  V +      ++    + P ++TYNTL HG  +  +   A  L   M+  +V  D
Sbjct: 519 YCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578

Query: 367 TCTYRTFIDGLCV 379
             TY   I G  V
Sbjct: 579 AVTYNMIISGFSV 591



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 178/342 (52%), Gaps = 6/342 (1%)

Query: 47  YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
           YT +I+++ +CK  Q      +   + + C  P+VVT   ++        +  A AL   
Sbjct: 160 YTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           + + G +P ++TYN+++ GL R G    A  +F+ M       GV   P+  +++++I G
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD----ACGVA--PDVRSFNMLIGG 273

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            C+ G +++A   + +M+   + P+VV+++ LI  F    + + A   L EM + G+ P+
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            V   +++   C+ G M  A R+ D MV     P+  TYNTL++G C   +++  +EL  
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLN 393

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M+  G   D  ++  LI+GYC++  +E+AL  ++ +  + ++P +VTYNTL  G+    
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              +A +L+ +M   ++  +  TY   ID  C + QV   +A
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 181/393 (46%), Gaps = 18/393 (4%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P P   F++L+    +++        F+ L    +       + L+    + G   L 
Sbjct: 85  PTPQP-QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLT 143

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              +  +L S    N  T   ++   C   +  E   + ++++     P+V+T+N +++ 
Sbjct: 144 ADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDA 203

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             R G    A+ L   M +         KP  VTY+ ++ GL + G  DKA+E+F  M  
Sbjct: 204 RFRAGDVEAAMALIDSMVSKG------IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA 257

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + P+V ++  LI GFC A +  EA     EM  + V P+VVS + ++    + G+MD+
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDH 317

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+  L  M +  + P+   Y  ++ GFC  G +     +   M + GC  D  +YN L+N
Sbjct: 318 AAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLN 377

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK + + +A  L NE+  +G+ P + T+ TL HG       E+AL+ F  +    +  
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437

Query: 366 DTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTN 398
           D  TY T IDG+C           R+G+ G  N
Sbjct: 438 DIVTYNTLIDGMC-----------RQGDLGKAN 459



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L K +       L   +   G+ PDL T++ LI+ +C+ G +      
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  I      P++VT+ +LI G+C +  + +A  L+  + +    PN +TY+ LI+  C 
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCE 486

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A     EM N     G+V  PN +TY+ II G C+ G V K ++   +M+++ +
Sbjct: 487 KGQVDNAFAFLDEMVNK----GIV--PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY +LIHG+      +EA  LL  M ++ VQP+ V+ N+I++    +G M  A  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           +   M    + P+ +TY ++++G  + G   +  +L   M   G   DD
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 189/372 (50%), Gaps = 7/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  ++   +    ++    +F+ +   GL PD+ +++  ++  CK G+      
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +      PN+VT+  L+ G   E    +  + F  +K  G   N + +  LI+   
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+ +  EM  G G       P+  TYS +I  LC+ G +  A + F QM    
Sbjct: 303 KRGMMDEAMLILSEM-QGQG-----LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMDNA 246
           + PN V Y SLI GFC   D  +AK L+ EM++ G+ +PN+   N I++ +CK G++ +A
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             + DL+     R +   +NTL+DG+CL G++ +   +  +M S G   D F+YN L+NG
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K+  +++ L+L+ E+  K IKPT VTYN +  GLF   +   A K+  EM G      
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536

Query: 367 TCTYRTFIDGLC 378
             TY   + GLC
Sbjct: 537 LPTYNIILKGLC 548



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 190/378 (50%), Gaps = 9/378 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M  +PP + ++ +++    + +  +  L+ F RL   GL  D    + ++ C C   +  
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60

Query: 64  LGF-VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFG-CEPNVITYN 120
               V+  R+      P+  ++  ++K LC ++R  +A  L   + K  G C P+V+TYN
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+I+G  + G    A NL+ EM          F P+ VT++ II+ LCK   VD A+ L 
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQG------FVPDVVTHNSIINALCKARAVDNAELLL 174

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QM    + PN VTYTS+IHG+     W EA  +  EM  +G+ P++VS N  M+ LCK+
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+   A+ +   M     RPN  TY  L+ G+   G    +   F +M+  G   +   +
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILI+ Y K   ++EA+ + +E+  +G+ P V TY+TL   L  + +   A+  F +M G
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 361 NDVAADTCTYRTFIDGLC 378
             V  +T  Y + I G C
Sbjct: 355 TGVQPNTVVYHSLIQGFC 372



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 184/369 (49%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ ILL   A    +  ++S F  +   G+  +   ++ILI+ + K G +    +I
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+V T+++LI  LC   R+ +A   F ++   G +PN + Y++LI G C 
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM N NG    + +PN   ++ I+  +CKEG V  A  +F  +K    
Sbjct: 374 HGDLVKAKELVYEMMN-NG----IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGE 428

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +++ + +LI G+C   +  +A  +L  M+  G+ P+  + N ++N   K+G++D+   
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    ++P   TYN ++DG    G+    +++   M   G      +YNI++ G C
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA+ ++ +L    +K  + T NT+ + ++ +++ E A  LF  +  + +  +  
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 609 TYGIMIRNL 617



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 170/386 (44%), Gaps = 42/386 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F IL+   AK    D  + +   +   GL PD++TYS LI+  C+MG+++     F +++
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 74  RSCFAPNVVTFTSLIKG------------------------------------LCAESRI 97
            +   PN V + SLI+G                                    +C E R+
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           ++A  +F  +K  G   ++I +NTLI+G C  G    A ++   M      I     P+T
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM------ISAGIGPDT 467

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            TY+ +++G  K G +D    LF +M  + + P  VTY  ++ G   A     A+ +L E
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+  G   ++ + N+I+  LC+N   D A  +   +   +V+ N  T NT+++      +
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
               K+LF ++   G   +  +Y I+I    K   VEEA ++++ +   G  P     N 
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDV 363
               L E  +  +A     ++ G  +
Sbjct: 648 TIRTLLEKGEIVKAGNYMSKVDGKSI 673



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 6/252 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++ FN ++  + K         +F  +  IG   D+  ++ LI+ +C +G++   F +
Sbjct: 395 PNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSV 454

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   P+  T+ +L+ G     RI +   LF ++     +P  +TYN +++GL R
Sbjct: 455 LDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFR 514

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T+ A  +  EM      IG     +  TY+II+ GLC+    D+A  +F ++   N+
Sbjct: 515 AGRTVAAQKMLHEM------IGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNV 568

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+ T  ++I+         EAK L   + D G+ PN  +  +++  L K G ++ A  
Sbjct: 569 KFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADN 628

Query: 249 LLDLMVQCDVRP 260
           +   M +    P
Sbjct: 629 MFSSMEKSGCAP 640


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 203/379 (53%), Gaps = 13/379 (3%)

Query: 9   PPVSSFNIL-LGCL--AKNKHYDTVLS-LFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P  SSF ++ +GC    K +  D  LS + +R    G  PD  T +++++  C+ G V+ 
Sbjct: 238 PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQR----GFIPDNATCTLILSALCENGLVNR 293

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
               F +++   F PN++ FTSLI GLC +  I +A  +  ++   G +PNV T+  LI+
Sbjct: 294 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 353

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G T  A  LF ++   +     ++KPN  TY+ +I G CKE  +++A+ LF +MK
Sbjct: 354 GLCKRGWTEKAFRLFLKLVRSD-----IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 408

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L PNV TYT+LI+G C A +++ A  L+  M D+G +PN+ + N +++ LCK  +  
Sbjct: 409 EQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAP 468

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL+    C +  +  TY  L+   C    I +    F  M   G + D    NILI
Sbjct: 469 EAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILI 528

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
             +C+ K+++E+  L+  +   G+ PT  TY ++  G  +    + ALK F  M+ +   
Sbjct: 529 AAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCV 588

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            D+ TY + I GLC +  V
Sbjct: 589 PDSFTYGSLISGLCKKSMV 607



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 186/376 (49%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 308 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 367

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+TS+I G C E ++  A  LF+++K  G  PNV TY TLING C
Sbjct: 368 FLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 427

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A  L   M +        F+PN  TY+ +ID LCK+    +A EL  +     
Sbjct: 428 KAGNFDRAYELMNLMDDEG------FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCG 481

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  + VTYT LI   C  +D  +A      M   G + ++  +N+++   C+  KM  + 
Sbjct: 482 LEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 541

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL  L+V   + P   TY +++ G+C  G  +   + F +M+  GC  D F+Y  LI+G 
Sbjct: 542 RLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGL 601

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V+EA  LY  +  +G+ P  VT  TL    +E  +   +    + ++  D     
Sbjct: 602 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTL---AYEYCKRNDSASAMIVLEPLDKKLWI 658

Query: 368 CTYRTFIDGLCVRPQV 383
            T RT +  LC   +V
Sbjct: 659 RTVRTLVRKLCSEKKV 674



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 160/345 (46%), Gaps = 7/345 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           GL P   T + ++    + G +     +F  +      P+  +F  ++ G   + +I EA
Sbjct: 200 GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA 259

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
               + +   G  P+  T   +++ LC  G    A+  F++M      I + FKPN + +
Sbjct: 260 DRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKM------IDLGFKPNLINF 313

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDGLCK+G + +A E+  +M      PNV T+T+LI G C      +A  L +++V 
Sbjct: 314 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 373

Query: 221 QGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             + +PNV +   ++   CK  K++ A  L   M +  + PN  TY TL++G C  G  +
Sbjct: 374 SDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFD 433

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R  EL   M+  G + + ++YN +I+  CK     EA  L N+    G++   VTY  L 
Sbjct: 434 RAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 493

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               +    ++AL  F  M      AD       I   C + +++
Sbjct: 494 QEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 538



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 7/293 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R+ EA  +   ++  G  P+ IT N ++     +G    A N+F EM+      GV   P
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR----GVC--P 238

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           ++ ++ +++ G  ++G + +A      M      P+  T T ++   C     N A    
Sbjct: 239 DSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYF 298

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M+D G +PN+++   +++ LCK G +  A  +L+ MV+   +PN +T+  L+DG C  
Sbjct: 299 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 358

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           G   +   LF+ +  S   K +  +Y  +I GYCK  ++  A  L++ +  +G+ P V T
Sbjct: 359 GWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 418

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           Y TL +G  +    +RA +L   M       +  TY   ID LC + +    Y
Sbjct: 419 YTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY 471



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 11/274 (4%)

Query: 116 VITYNTLI-NGLCRTGHTIV--ALNLFKEMTNGNGEIGVV-------FKPNTVTYSIIID 165
           ++T ++LI NG  +  H ++   L  F E+   N  +G+V         P+++T + +++
Sbjct: 154 LVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLE 213

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + G +D A+ +F +M    + P+  ++  ++ G        EA   L  M+ +G  P
Sbjct: 214 IAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIP 273

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  +  +I++ LC+NG ++ A      M+    +PN   + +L+DG C  G I +  E+ 
Sbjct: 274 DNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 333

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFE 344
             M   G K + +++  LI+G CK    E+A  L+ +L    I KP V TY ++  G  +
Sbjct: 334 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCK 393

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +  RA  LF  M+   +  +  TY T I+G C
Sbjct: 394 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 427



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 6/234 (2%)

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++A  + + M+ + L+P+ +T   ++     +   + A+ +  EM  +GV P+  S 
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            +++    ++GK+  A R L  M+Q    P+  T   ++   C  G +NR    F  M  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +G K +  ++  LI+G CK   +++A  +  E+   G KP V T+  L  GL +    E+
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 351 ALKLFVEMQGNDV-AADTCTYRTFIDGLCV-----RPQVRFTYARRKGNSGNTN 398
           A +LF+++  +D+   +  TY + I G C      R ++ F+  + +G   N N
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 15/221 (6%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y +  D L   G + KA E+   M               +  F      NEA G++++M 
Sbjct: 153 YLVTADSLIANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 197

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +QG+ P+ ++ N ++    ++G +D A  + D M    V P++ ++  ++ G    GKI 
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                   M   G   D+ +  ++++  C+N  V  A+  + ++   G KP ++ + +L 
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 317

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            GL +    ++A ++  EM  N    +  T+   IDGLC R
Sbjct: 318 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 358


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 194/378 (51%), Gaps = 6/378 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   +   P + + N++L  L K+      +  F+   + G   D++TY+ +++   K  
Sbjct: 120 MEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNK 179

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +  +I  +   P + T+ +L+ GLC   R+ EA  L  K+   GC P+V+TY 
Sbjct: 180 KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 239

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+GL +   +  A  LFKEM       G+V   +TV Y+ +I GL + G + +A  ++
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEM----ALRGLVL--DTVCYTALIRGLLQAGKIPQASSVY 293

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  +   P+VVT +++I G C A     A  +   M  +G+ PN V  + +++ LCK 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            KMD A  +L  M +    P+  TYN L+DG C +G +   +  F  M   GCK D ++Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NIL++G+CK    + A  +++++      P VVTY TL  GL + RQ  +A   F  M+ 
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473

Query: 361 NDVAADTCTYRTFIDGLC 378
                D+  Y + +DGLC
Sbjct: 474 RGCPPDSFVYSSLVDGLC 491



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 191/354 (53%), Gaps = 6/354 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  ++  LAKNK     ++L +++ + G  P + TY+ L+N  CKMG++     +  
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I+ +   P+VVT+TSLI GL  E R  EA  LF ++   G   + + Y  LI GL + G
Sbjct: 225 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +++K MT+     G V  P+ VT S +IDGLCK G +  A  +F  M+   L P
Sbjct: 285 KIPQASSVYKTMTSQ----GCV--PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V Y++LIHG C A   + A  +L +M      P+ ++ N++++ LCK+G ++ A    
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++   +P+ +TYN L+ GFC  G  +    +F  M S  C  +  +Y  LI+G CK 
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +++ +A   +  +  +G  P    Y++L  GL +  + E    LF EM+ + VA
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 512



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 200/378 (52%), Gaps = 11/378 (2%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLG 65
           P V ++N+L+   CLA+    +   ++ + +    G+ P L T++++++  CK G+V   
Sbjct: 92  PDVETWNVLITGYCLAREP--EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAA 149

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              F     +    ++ T+T+++  L    +I +A AL  K+ A GC P + TYN L+NG
Sbjct: 150 MDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNG 209

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G    A++L +++ + NG       P+ VTY+ +IDGL KE    +A +LF +M  
Sbjct: 210 LCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 263

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L  + V YT+LI G   A    +A  +   M  QG  P+VV+ + +++ LCK G++  
Sbjct: 264 RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 323

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A R+   M    + PN   Y+ L+ G C   K++   E+   M+   C  D  +YNILI+
Sbjct: 324 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 383

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK+ +VE A + ++E+   G KP V TYN L  G  +    + A  +F +M  +  + 
Sbjct: 384 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSP 443

Query: 366 DTCTYRTFIDGLCVRPQV 383
           +  TY T I GLC R Q+
Sbjct: 444 NVVTYGTLISGLCKRRQL 461



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 149/347 (42%), Gaps = 40/347 (11%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F  +V T  +L+       R  EA  L     A    P+V T+N LI G C       A 
Sbjct: 55  FQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAF 114

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            + +EM    G       P+  T+++++ GLCK G V  A + F          ++ TYT
Sbjct: 115 AVIREMEEDYG-----VAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYT 169

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +++          +A  L+ ++   G  P + + N ++N LCK G+++ A  LL  +V  
Sbjct: 170 AIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 229

Query: 257 DVRPNAFTYNTLMDGF--------------------------CLT---------GKINRV 281
              P+  TY +L+DG                           C T         GKI + 
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             ++ +M S GC  D  + + +I+G CK   +  A+ ++  +  +G+ P  V Y+ L HG
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           L + R+ + AL++  +M+      DT TY   IDGLC    V    A
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 396



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 36/192 (18%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL------- 274
           G Q +V + N +++   +  +   A  LL   +     P+  T+N L+ G+CL       
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 275 -----------------------------TGKINRVKELFVSMESMGCKHDDFSYNILIN 305
                                        +GK+    + F +  + GC  D  +Y  +++
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
              KNK++++A++L  ++   G  PT+ TYN L +GL ++ + E A+ L  ++  N    
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 366 DTCTYRTFIDGL 377
           D  TY + IDGL
Sbjct: 234 DVVTYTSLIDGL 245



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   H SP  V ++  L+  L K +        F+ +   G  PD + YS L++  CK G
Sbjct: 436 MSSSHCSPN-VVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++  G ++F  + RS  A N  T T LI  LC  +R+ EA +LF  ++  G  P+   YN
Sbjct: 495 KLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYN 552

Query: 121 TLINGLCRTG 130
           ++I+ L ++ 
Sbjct: 553 SIISTLIKSA 562


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 195/366 (53%), Gaps = 10/366 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++  L +     + L     +   G  PD YT++ LI  +C+  QV +   +F ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               FA +VV++ +LI+G C   RI EA  LF ++     +P++  Y  L+ GLC+ G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
              L + + M     E+G  ++P+T  Y+ ++D  C E    +A+E+  +M  + L P V
Sbjct: 129 EEGLLMLRRMK----ELG--WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT T++I+ +C     ++A  +L  M  +G +PNV + N ++   C  GK+  A  LL+ 
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M  C V P+A TYN L+ G C+ G I     L   ME  G   D ++YN LIN  CK+  
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++A SL++ L  +GIKP  VT+N+L +GL +  + + A K   +M       DT TY +
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 373 FIDGLC 378
           FI+ LC
Sbjct: 363 FIEHLC 368



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 179/373 (47%), Gaps = 10/373 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+  L+    +    D  + LF  ++     PD++ Y+ L+   CK G+   G ++  
Sbjct: 81  VVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLR 136

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R+    + P+   + +++   C E +  EA  +  ++   G  P V+T   +IN  C+ G
Sbjct: 137 RMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 196

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL +  E+    G      KPN  TY+ ++ G C EG V KA  L  +M+   +NP
Sbjct: 197 RMSDALRVL-ELMKLRG-----CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNP 250

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTY  LI G C       A  LL  M   G+  +  + N ++N LCK+G+ D A  L 
Sbjct: 251 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 310

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D +    ++PNA T+N+L++G C +GK++   +    M S GC  D ++Y+  I   CK 
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K  +E LS   E+  K +KP+ V Y  + H L + R      + + EM  +    D  TY
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430

Query: 371 RTFIDGLCVRPQV 383
            T +   C+  ++
Sbjct: 431 TTSMRAYCIEGRL 443



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 182/421 (43%), Gaps = 58/421 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+     + H ++   L + +   GL  D YTY+ LIN  CK G+      +
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTF SLI GLC   ++  A     K+ + GC P+  TY++ I  LC+
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +   L+   EM   +       KP+TV Y+I+I  L KE         + +M     
Sbjct: 370 MKGSQEGLSFIGEMLQKD------VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 423

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+VVTYT+ +  +C     NEA+ +L+EM   GV  + ++ N +M+     G+ D+A  
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 483

Query: 249 LL----------------------------------------------------DLMVQC 256
           +L                                                    D+M + 
Sbjct: 484 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 543

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           +  PN+ TY+++++GF   G+      L   M+      ++  Y  L+  +CK+K   +A
Sbjct: 544 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 603

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L   +   G  P +++Y  L  GL    Q ++A ++F+  +  D + D   ++  IDG
Sbjct: 604 WVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 663

Query: 377 L 377
           L
Sbjct: 664 L 664



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 177/393 (45%), Gaps = 50/393 (12%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSLIKG 90
            + + +   GL P + T + +IN +CK G++S    +   + LR C  PNV T+ +L++G
Sbjct: 168 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC-KPNVWTYNALVQG 226

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C E ++ +A AL  K++  G  P+ +TYN LI G C  GH   A  L + M  G+G I 
Sbjct: 227 FCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM-EGDGLIA 285

Query: 151 VVF------------------------------KPNTVTYSIIIDGLCKEGFVDKAKELF 180
             +                              KPN VT++ +I+GLCK G VD A +  
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL 345

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M      P+  TY+S I   C      E    + EM+ + V+P+ V+  +++++L K 
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
                 +R    MV     P+  TY T M  +C+ G++N  + + + M   G   D  +Y
Sbjct: 406 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 465

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK------- 353
           N L++G+    + + A+S+  ++      P   TY  L   L  +R  E  L        
Sbjct: 466 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 525

Query: 354 ----------LFVEMQGNDVAADTCTYRTFIDG 376
                     LF  M+ N+   ++ TY + ++G
Sbjct: 526 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 558



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 58/386 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGF 66
           P   +FN L+  L K+   D      +++ S G  PD YTYS  I   CKM   Q  L F
Sbjct: 320 PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 379

Query: 67  V---------------------------------IFGRILRSCFAPNVVTFTSLIKGLCA 93
           +                                  +G ++ S   P+VVT+T+ ++  C 
Sbjct: 380 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 439

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R+ EA  +  ++   G   + + YNTL++G    G T  A+++ K+MT+      V  
Sbjct: 440 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS------VAS 493

Query: 154 KPNTVTYSIIIDGLCKEGFVD-----------KAKEL------FLQMKYENLNPNVVTYT 196
            PN  TY I++  L +   V+           KA EL      F  MK     PN  TY+
Sbjct: 494 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 553

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           S++ GF       EA  L+  M +  +  N      ++   CK+ +  +A  L+  M+Q 
Sbjct: 554 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 613

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P+  +Y  L+ G    G+ ++ KE+F++        D+  + ++I+G  K    + +
Sbjct: 614 GFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 673

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGL 342
             +   L     +P+  TY  L   L
Sbjct: 674 REMIIMLERMNCRPSHQTYAMLTEEL 699


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 194/370 (52%), Gaps = 9/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F ILL  L ++   +    L  R+  +G  PD   Y+ LI+ + K       F  
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++   P VVT+T+++ GLC   R  +A  L  +++  GC PN+ TYN ++ GLC 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + +EM          + P+ VTY+  I GLCK   VD+A++   +M    +
Sbjct: 128 ERKLDEAKKMLEEMAVRG------YFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 178

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+YT++I+G C + D + A  +L +M ++G  P+VV+ + +++  CK G+++ A  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M++   RPN   YN+L+      G I + +++ V ME  G   D  SYN  I+G C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + V++A ++++ +  +G  P   +Y+ L   L + ++ + A+ L  + +      D  
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 369 TYRTFIDGLC 378
            Y   +DGLC
Sbjct: 359 LYTVLLDGLC 368



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 194/371 (52%), Gaps = 11/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++  L + +  D    + + +   G FPD+ TY+  I   CK  +V      
Sbjct: 113 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+VV++T++I GLC    +  A+ +  ++   GC P+V+TY++LI+G C+
Sbjct: 173 LARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCK 229

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L   M      + +  +PN V Y+ ++  L + G + KA+++ ++M+    
Sbjct: 230 GGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+Y + I G C A    +AK +   MV++G  PN  S ++++ ELCK  ++D+A  
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS-MESMGCKHDDFSYNILINGY 307
           L++   +     +   Y  L+DG C  G+ +    LF   ++   C+ D F YN++++ +
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK +++++AL ++ ++  +     VVT+N L HGL    +   A  + + M       D 
Sbjct: 404 CKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 462

Query: 368 CTYRTFIDGLC 378
            TY T +D +C
Sbjct: 463 VTYGTLVDAMC 473



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 164/317 (51%), Gaps = 10/317 (3%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           I +SC  P+  TF  L++GLC  +++ +A  L  ++K  GC P+   YN LI+G  +   
Sbjct: 2   IDKSC-QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A     EM   +        P  VTY+ I+DGLCK G    A +L  +M+ +  +PN
Sbjct: 61  FGQAFKFLAEMVKNH------CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPN 114

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           + TY  ++ G C     +EAK +L EM  +G  P+VV+ N  +  LCK  ++D A + L 
Sbjct: 115 IYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA 174

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    V P+  +Y T+++G C +G ++    +   M + GC  D  +Y+ LI+G+CK  
Sbjct: 175 RM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG 231

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           EVE A+ L + +   G +P +V YN+L   L  +    +A  + VEM+      D  +Y 
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291

Query: 372 TFIDGLCVRPQVRFTYA 388
             IDGLC   +V+   A
Sbjct: 292 ACIDGLCKAERVKKAKA 308



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 185/360 (51%), Gaps = 11/360 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P V S+  ++  L K+   D+   +  ++ + G  PD+ TYS LI+ FCK G+V   
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +L+    PN+V + SL+  L     I +A  +  +++  G  P+V++YN  I+G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+      A  +F  M     E G    PN  +YS++++ LCK+  +D A  L  Q + 
Sbjct: 297 LCKAERVKKAKAVFDRMV----ERGCT--PNASSYSMLVEELCKKKELDDAITLVEQARE 350

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMD 244
           +    +++ YT L+ G C    ++EA  L  +++D+ + +P+V   NV+++  CK  ++D
Sbjct: 351 KYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 410

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A ++   M++ +   N  T+N L+ G C+  +++  + + ++M   G   D  +Y  L+
Sbjct: 411 KALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +  CK  +   AL L+ E    G  P VVTY+ L  GL     AE A  LF ++   DVA
Sbjct: 470 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL---DVA 526



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+D+  QP+  +  +++  LC++ +++ A +LL  M +    P+   YN L+ G+     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
             +  +    M    C     +Y  +++G CK    ++A+ L +E+  KG  P + TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  GL E R+ + A K+  EM       D  TY +FI GLC
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLC 161



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++NIL+  L  +       ++   +   G  PD  TY  L++  CK G+ +    +F 
Sbjct: 427 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 486

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             ++    P+VVT+++LI GL  E+   EA  LFTKL       +V  +N +I G    G
Sbjct: 487 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENG 539

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG-LCKEGFVDKAKELFLQMKYENLN 189
              + L LF E+   + E      PN  T+   I G L K   + KA+ LF +       
Sbjct: 540 SGDLGLKLFVELIESDVE------PNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFF 593

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           P++    +LI  F    D  EA+ +   M
Sbjct: 594 PDLFVANTLIDVFAKCGDLEEARRIFYSM 622


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 12/370 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PPV   NIL+  L  +        +F    ++G    + TY+ ++N +C+ G++     +
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFA---ALGPSATVVTYNTMVNGYCRAGRIEDARRL 241

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F P+  TF  LI+ LC   RI +A A+F  +   GC P+V+TY+ L++  C+
Sbjct: 242 INGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCK 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  EM     E      P+ VTY+++I+ +C EG VD+A  +   +     
Sbjct: 299 ESGYRQAMALLDEMRAKGCE------PDIVTYNVLINAMCNEGDVDEALNILSNLPSHGC 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYT ++   C +  W E + LL EM      P+ V+ N I+  LC+ G +D A  
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIE 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++D M +     +  TY++++DG C  G+++   EL   ++S GCK D  +Y  ++ G C
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             ++ E A  L  E+      P  VT+NT+   L +    +RA+++  +M  N  + D  
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532

Query: 369 TYRTFIDGLC 378
           TY   IDGLC
Sbjct: 533 TYNCIIDGLC 542



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 12/372 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ILL    K   Y   ++L   + + G  PD+ TY++LIN  C  G V     I
Sbjct: 284 PSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ VT+T ++K LC   R  E   L  ++ +  C P+ +T+NT++  LC+
Sbjct: 344 LSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQ 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +   M+    E G V   + VTYS I+DGLC  G VD A EL  ++K    
Sbjct: 404 QGLVDRAIEVVDHMS----EHGCVA--DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ + YT+++ G C    W  A+ L+ EM+     P+ V+ N ++  LC+ G +D A R
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++ M +    P+  TYN ++DG C    I+   EL   ++S GCK D  ++N L+ G C
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC 577

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAA 365
                E+A  L   +      P  +T+NT+   L +   + QA   LK+  E   N    
Sbjct: 578 GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAE---NGCVP 634

Query: 366 DTCTYRTFIDGL 377
           ++ TY   +D L
Sbjct: 635 NSSTYSIVVDAL 646



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP   +FN L+  L         L++F  +   G  P + TYSIL++  CK       
Sbjct: 246 PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQA 305

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      P++VT+  LI  +C E  + EA  + + L + GC+P+ +TY  ++  
Sbjct: 306 MALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKS 365

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC +        L  EMT+ N        P+ VT++ I+  LC++G VD+A E+   M  
Sbjct: 366 LCGSERWKEVEELLAEMTSNN------CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE 419

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                ++VTY+S++ G C     ++A  LL  +   G +P+ ++   ++  LC   + + 
Sbjct: 420 HGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWER 479

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  M+  D  P+  T+NT++   C  G ++R   +   M   GC  D  +YN +I+
Sbjct: 480 AEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C    +++A+ L ++L   G KP +VT+NTL  GL  + + E A +L   M  ++   
Sbjct: 540 GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPP 599

Query: 366 DTCTYRTFIDGLCVR 380
           D  T+ T I  LC +
Sbjct: 600 DELTFNTVITSLCQK 614



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 191/374 (51%), Gaps = 8/374 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++  +L  L  ++ +  V  L   + S    PD  T++ ++   C+ G V  
Sbjct: 350 HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDR 409

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +       ++VT++S++ GLC   R+ +A  L ++LK++GC+P+ I Y T++ 
Sbjct: 410 AIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 469

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC T     A  L  EM   +        P+ VT++ ++  LC++G VD+A  +  QM 
Sbjct: 470 GLCSTEQWERAEELMAEMLCSD------CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
               +P++VTY  +I G C+ +  ++A  LL ++   G +P++V+ N ++  LC   + +
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWE 583

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A +L+  M++ +  P+  T+NT++   C  G + +  E    M   GC  +  +Y+I++
Sbjct: 584 DAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K  + + AL L + +      P ++TYNT+   L +  + E AL L   M  N + 
Sbjct: 644 DALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701

Query: 365 ADTCTYRTFIDGLC 378
            DT TYR+   G+C
Sbjct: 702 PDTTTYRSLAYGVC 715



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN ++  L +    D  + +   ++  G   D+ TYS +++  C +G+V     +
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+ + +T+++KGLC+  +   A  L  ++    C P+ +T+NT++  LC+
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+  NG       P+ VTY+ IIDGLC E  +D A EL   ++    
Sbjct: 509 KGLVDRAIRVVEQMSE-NG-----CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGC 562

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VT+ +L+ G C  + W +A+ L+  M+     P+ ++ N ++  LC+ G +  A  
Sbjct: 563 KPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIE 622

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L +M +    PN+ TY+ ++D     GK     EL   M +     D  +YN +I+   
Sbjct: 623 TLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLT 680

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++EEAL L   +   G+ P   TY +L +G+      +RA+++   +Q   ++ DT 
Sbjct: 681 KAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTT 740

Query: 369 TYRTFIDGLC 378
            Y   + G C
Sbjct: 741 FYNDVLLGFC 750



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 168/329 (51%), Gaps = 18/329 (5%)

Query: 58  KMGQVSLGFVIFGRIL----RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE 113
           + G++    V+F  +     R+C  P VV    LIK LC++ R+ +A  +F    A G  
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNC--PPVVPCNILIKRLCSDGRVSDAERVFA---ALGPS 216

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
             V+TYNT++NG CR G    A  L           G+ F P+T T++ +I  LC  G +
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLIN---------GMPFPPDTFTFNPLIRALCVRGRI 267

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A  +F  M +   +P+VVTY+ L+   C  + + +A  LL EM  +G +P++V+ NV+
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N +C  G +D A  +L  +     +P+A TY  ++   C + +   V+EL   M S  C
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D+ ++N ++   C+   V+ A+ + + +   G    +VTY+++  GL ++ + + A++
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           L   ++      DT  Y T + GLC   Q
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQ 476



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 8/321 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN ++  L +    D  + + ++++  G  PD+ TY+ +I+  C    +     
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      P++VTF +L+KGLC   R  +A  L   +    C P+ +T+NT+I  LC
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+   K M     E G V  PN+ TYSI++D L K G    A EL   M   N
Sbjct: 613 QKGLLTQAIETLKIM----AENGCV--PNSSTYSIVVDALLKAGKAQAALELLSGMT--N 664

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+++TY ++I     A    EA  LL  MV  G+ P+  +   +   +C+    D A 
Sbjct: 665 GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  +    + P+   YN ++ GFC   + +   + F  M S GC  D+ +Y IL+   
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784

Query: 308 CKNKEVEEALSLYNELPFKGI 328
                ++EA  L   L   G+
Sbjct: 785 AYGGLLDEAKRLLASLCSLGV 805



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 157/334 (47%), Gaps = 8/334 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  +L  L   + ++    L   +      PD  T++ ++   C+ G V     +
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +  +P++VT+  +I GLC ES I +A  L + L++ GC+P+++T+NTL+ GLC 
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   M   N        P+ +T++ +I  LC++G + +A E    M     
Sbjct: 579 VDRWEDAEQLMANMMRSN------CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY+ ++     A     A  LL  M +    P++++ N +++ L K GKM+ A  
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALD 690

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +MV   + P+  TY +L  G C     +R   +   ++  G   D   YN ++ G+C
Sbjct: 691 LLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFC 750

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +++  + A+  +  +   G  P   TY  L   L
Sbjct: 751 RDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 202/380 (53%), Gaps = 8/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L K  +      LF ++   G+ P+L+T++I I   C+ G +     +
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I+     P+V+++ +LI G C  S++VEA     K+   G EPN  TYNT+ING C+
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  + ++ M  G       F P+  TYS +I+GLC +G +++A  +F +   + 
Sbjct: 334 AGMMQNADKILRDAMFKG-------FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              +++ Y +L+ G        +A  L+ +M++ G  P++ + N+++N LCK G + +A+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+  +     P+ FT+NTL+DG+C    +++  E+  +M S G   D  +YN L+NG 
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK ++++  +  +  +  KG  P ++TYN L     + R+   A++LF EM+   +  D 
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            T  T I GLC   ++   Y
Sbjct: 567 VTLCTLICGLCSNGELDKAY 586



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 209/406 (51%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L +  ++     ++ R+  IG++PD+YT++I +  FC  G+ +    +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N V++ ++I G   E+  +EA  LF ++   G  P+++T+N LI+ LC+
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   +  LF ++       GV   PN  T++I I GLC++G +D+A  L   +  E L
Sbjct: 229 KGNVQESEKLFSKVMKR----GVC--PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++Y +LI GFC  +   EA+  L +MV+ GV+PN  + N I+N  CK G M NA +
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 249 LL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS-------------------- 287
           +L D M +  + P+ FTY++L++G C  G +NR   +F                      
Sbjct: 343 ILRDAMFKGFI-PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 288 ---------------MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                          M   GC  D ++YN+++NG CK   + +A  + N+   KG  P +
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            T+NTL  G  + R  ++A+++   M  + +  D  TY T ++GLC
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            +++F+R++     P + +Y+ ++N   + G  S    ++ R+      P+V T T  +K
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C   R   A  L   +   GCE N ++Y  +I+G  +    I A +LF EM       
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ---- 210

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+   P+ +T++ +I  LCK+G V ++++LF ++    + PN+ T+   I G C     +
Sbjct: 211 GIC--PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL  +V +G+ P+V+S N ++   CK+ K+  A   L  MV   V PN FTYNT++
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +GFC  G +    ++       G   D+F+Y+ LING C + ++  A++++ E   KG K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +++ YNTL  GL +     +AL+L  +M  +  + D  TY   ++GLC
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 161/343 (46%), Gaps = 50/343 (14%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD +TYS LIN  C  G ++    +F   +   F  +++ + +L+KGL  +  +++A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L   +   GC P++ TYN ++NGLC+ G    A  +       N  I     P+  T+
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL------NDAIAKGCIPDIFTF 464

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG CK+  +DKA E+   M    + P+V+TY +L++G C A   +        M++
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  PN+++ N+++   CK+ K+  A  L   M    + P+  T  TL+ G C  G++++
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584

Query: 281 VKELFVSMESMGCKHDDFSY-----NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
             ELFV++E    K   FSY     NI+IN +C    V                      
Sbjct: 585 AYELFVTIE----KEYKFSYSTAIFNIMINAFCXKLNV---------------------- 618

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                          A KLF +M G+D A D  TYR  ID  C
Sbjct: 619 -------------SMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 174/366 (47%), Gaps = 14/366 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+  L+K       L L K +   G  PD++TY++++N  CKMG +S    I    +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P++ TF +LI G C +  + +A  +   + + G  P+VITYNTL+NGLC+     
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
             ++ FK M     E G    PN +TY+I+I+  CK+  V +A ELF +MK   L P++V
Sbjct: 514 NVVDTFKAML----EKGCT--PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           T  +LI G C   + ++A  L + +  +     +    N+++N  C    +  A +L   
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M   D  P+ +TY  ++D +C TG I+      +   S G      +   ++N  C    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL-KLFVEMQGNDVAADTCTYR 371
           + EA+ + N +   GI P  V      + +FE  + E A  K+ VE           +Y 
Sbjct: 688 LSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVAAPKIVVEYLLKKSHITYYSYE 741

Query: 372 TFIDGL 377
              DG+
Sbjct: 742 LLYDGI 747



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 5/252 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+    K ++ D  + +   + S G+ PD+ TY+ L+N  CK  ++      
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     PN++T+  LI+  C + ++ EA  LF ++K  G  P+++T  TLI GLC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  +     E    F  +T  ++I+I+  C +  V  A++LF +M   + 
Sbjct: 579 NGELDKAYELFVTI-----EKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDC 633

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +I  +C   + + A   L+E + +G+ P+  +   ++N LC   ++  A  
Sbjct: 634 APDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVV 693

Query: 249 LLDLMVQCDVRP 260
           +++LMVQ  + P
Sbjct: 694 IINLMVQNGIVP 705



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N LL  L K +  D V+  FK +   G  P++ TY+ILI  FCK  +VS 
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLI 123
              +F  +      P++VT  +LI GLC+   + +A  LF  + K +    +   +N +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           N  C   +  +A  LF +M       G    P+  TY ++ID  CK G +D A    L+ 
Sbjct: 610 NAFCXKLNVSMAEKLFHKMG------GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             + L P+  T   +++  C  +  +EA  ++  MV  G+ P  V+S
Sbjct: 664 ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVNS 710



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
           AL +F ++   +G     FK    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  ++  +       EA  +   M     +P+V S N IMN L + G    A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+ +T+   M  FC+TG+      L  +M   GC+ +  SY  +I+G+ K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             EA  L++E+  +GI P ++T+N L H L +    + + KLF ++    V  +  T+  
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 373 FIDGLCVRPQV 383
           FI GLC +  +
Sbjct: 257 FIQGLCRKGAI 267


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 202/380 (53%), Gaps = 8/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L K  +      LF ++   G+ P+L+T++I I   C+ G +     +
Sbjct: 214 PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I+     P+V+++ +LI G C  S++VEA     K+   G EPN  TYNT+ING C+
Sbjct: 274 LESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK 333

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  + ++ M  G       F P+  TYS +I+GLC +G +++A  +F +   + 
Sbjct: 334 AGMMQNADKILRDAMFKG-------FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              +++ Y +L+ G        +A  L+ +M++ G  P++ + N+++N LCK G + +A+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+  +     P+ FT+NTL+DG+C    +++  E+  +M S G   D  +YN L+NG 
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK ++++  +  +  +  KG  P ++TYN L     + R+   A++LF EM+   +  D 
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            T  T I GLC   ++   Y
Sbjct: 567 VTLCTLICGLCSNGELDKAY 586



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 209/406 (51%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L +  ++     ++ R+  IG++PD+YT++I +  FC  G+ +    +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N V++ ++I G   E+  +EA  LF ++   G  P+++T+N LI+ LC+
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   +  LF ++       GV   PN  T++I I GLC++G +D+A  L   +  E L
Sbjct: 229 KGNVQESEKLFSKVMKR----GVC--PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGL 282

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V++Y +LI GFC  +   EA+  L +MV+ GV+PN  + N I+N  CK G M NA +
Sbjct: 283 TPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADK 342

Query: 249 LL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS-------------------- 287
           +L D M +  + P+ FTY++L++G C  G +NR   +F                      
Sbjct: 343 ILRDAMFKGFI-PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 288 ---------------MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                          M   GC  D ++YN+++NG CK   + +A  + N+   KG  P +
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            T+NTL  G  + R  ++A+++   M  + +  D  TY T ++GLC
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            +++F+R++     P + +Y+ ++N   + G  S    ++ R+      P+V T T  +K
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C   R   A  L   +   GCE N ++Y  +I+G  +    I A +LF EM       
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ---- 210

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+   P+ +T++ +I  LCK+G V ++++LF ++    + PN+ T+   I G C     +
Sbjct: 211 GIC--PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL  +V +G+ P+V+S N ++   CK+ K+  A   L  MV   V PN FTYNT++
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +GFC  G +    ++       G   D+F+Y+ LING C + ++  A++++ E   KG K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +++ YNTL  GL +     +AL+L  +M  +  + D  TY   ++GLC
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 162/343 (47%), Gaps = 50/343 (14%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD +TYS LIN  C  G ++    +F   +   F  +++ + +L+KGL  +  +++A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L   +   GC P++ TYN ++NGLC+ G    A  +       N  I     P+  T+
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL------NDAIAKGCIPDIFTF 464

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG CK+  +DKA E+   M    + P+V+TY +L++G C A   +        M++
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  PN+++ N+++   CK+ K+  A  L   M    + P+  T  TL+ G C  G++++
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584

Query: 281 VKELFVSMESMGCKHDDFSY-----NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
             ELFV++E    K   FSY     NI+IN +C+   V                      
Sbjct: 585 AYELFVTIE----KEYKFSYSTAIFNIMINAFCEKLNV---------------------- 618

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                          A KLF +M G+D A D  TYR  ID  C
Sbjct: 619 -------------SMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 14/373 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+  L+K       L L K +   G  PD++TY++++N  CKMG +S    I    +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P++ TF +LI G C +  + +A  +   + + G  P+VITYNTL+NGLC+     
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
             ++ FK M     E G    PN +TY+I+I+  CK+  V +A ELF +MK   L P++V
Sbjct: 514 NVVDTFKAML----EKGCT--PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           T  +LI G C   + ++A  L + +  +     +    N+++N  C+   +  A +L   
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M   D  P+ +TY  ++D +C TG I+      +   S G      +   ++N  C    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL-KLFVEMQGNDVAADTCTYR 371
           + EA+ + N +   GI P  V      + +FE  + E A  K+ VE           +Y 
Sbjct: 688 LSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVAAPKIVVEYLLKKSHITYYSYE 741

Query: 372 TFIDGLCVRPQVR 384
              DG+  R  V 
Sbjct: 742 LLYDGIRNRKVVE 754



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 158/321 (49%), Gaps = 11/321 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+    K ++ D  + +   + S G+ PD+ TY+ L+N  CK  ++      
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     PN++T+  LI+  C + ++ EA  LF ++K  G  P+++T  TLI GLC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF  +     E    F  +T  ++I+I+  C++  V  A++LF +M   + 
Sbjct: 579 NGELDKAYELFVTI-----EKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDC 633

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +I  +C   + + A   L+E + +G+ P+  +   ++N LC   ++  A  
Sbjct: 634 APDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVV 693

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++LMVQ  + P     N++ +      K     ++ V           +SY +L +G  
Sbjct: 694 IINLMVQNGIVPEEV--NSIFEA---DKKEVAAPKIVVEYLLKKSHITYYSYELLYDG-I 747

Query: 309 KNKEVEEALSLYNELPFKGIK 329
           +N++V EA  L  ++ ++  K
Sbjct: 748 RNRKVVEARPLLYKVAYQKAK 768



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 7/227 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N LL  L K +  D V+  FK +   G  P++ TY+ILI  FCK  +VS 
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLI 123
              +F  +      P++VT  +LI GLC+   + +A  LF  + K +    +   +N +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           N  C   +  +A  LF +M       G    P+  TY ++ID  CK G +D A    L+ 
Sbjct: 610 NAFCEKLNVSMAEKLFHKMG------GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLEN 663

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             + L P+  T   +++  C  +  +EA  ++  MV  G+ P  V+S
Sbjct: 664 ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVNS 710



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
           AL +F ++   +G     FK    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  ++  +       EA  +   M     +P+V S N IMN L + G    A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+ +T+   M  FC+TG+      L  +M   GC+ +  SY  +I+G+ K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             EA  L++E+  +GI P ++T+N L H L +    + + KLF ++    V  +  T+  
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 373 FIDGLCVRPQV 383
           FI GLC +  +
Sbjct: 257 FIQGLCRKGAI 267


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 181/330 (54%), Gaps = 9/330 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SFN L+  L K+++ D    L K +    ++PD++TYS+LI+  CK G++ +   +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PN +TFT+LI G C   RI  A   + ++   G +P+++ YNTL+NGLC+
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM        V  KP+ +TY+ +IDG CKEG ++ A E+   M  E +
Sbjct: 376 VGDVNKARKLVDEMRM------VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T+LI GFC      +A+  L EMV+ G++P+  +  ++++  CK G +    +
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M     +P   TYN LM+G C  G++     L  +M ++G   DD +YNIL+ G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           KN + E+ L L NE   KG+      Y +L
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVDYAYYTSL 576



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 29  TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
           T+ + +  +   G  P +  Y+ILIN FCK G +    +IF  I +    P  V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
            GLC    + E   L   ++     P+V TY+ LI+GLC+ G   VA  LF EM      
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-- 323

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                +PN +T++ +IDG C+   +D A   + QM    + P++V Y +L++G C   D 
Sbjct: 324 ----LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           N+A+ L+ EM   G++P+ ++   +++  CK G +++A  +   M +  V  +   +  L
Sbjct: 380 NKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + GFC  G++   +     M   G K DD +Y ++I+GYCK   V+    L  E+   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KP V+TYN L +GL +  Q + A  L   M    V  D  TY   ++G C
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 187/347 (53%), Gaps = 6/347 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  +NIL+    K         +F  +   GL P   +++ LIN  CK   +  GF 
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +  +   P+V T++ LI GLC E R+  A  LF +++  G  PN IT+  LI+G C
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R+     A+N + +M      +GV  KP+ V Y+ +++GLCK G V+KA++L  +M+   
Sbjct: 340 RSRRIDSAMNTYHQMLT----MGV--KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ +TYT+LI G+C   D   A  +   M ++GV  + V+   +++  C++G++ +A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R L  MV+  ++P+  TY  ++DG+C  G +    +L   M+  G K    +YN+L+NG 
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           CK  +++ A  L   +   G+ P  +TYN L  G  +  +AE  LKL
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 167/319 (52%), Gaps = 6/319 (1%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +  +  IL   F P V  +  LI   C E  I +A  +F +++  G  P  +++NTLING
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC++ +      L K M            P+  TYS++I GLCKEG +D A++LF +M+ 
Sbjct: 268 LCKSRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PN +T+T+LI G C +   + A     +M+  GV+P++V  N ++N LCK G ++ 
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +L+D M    ++P+  TY TL+DG+C  G +    E+   M   G   D+ ++  LI+
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C++  V +A     E+   G+KP   TY  +  G  +    +   KL  EMQ N    
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 366 DTCTYRTFIDGLCVRPQVR 384
              TY   ++GLC + Q++
Sbjct: 502 GVITYNVLMNGLCKQGQMK 520



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 13/371 (3%)

Query: 21  LAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           L   K  D+  S+F   L++ G     + +  L+  +   G VS     F  +  S F  
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQI 186

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
                  L+  +   +  V     ++++  +G  P V  YN LIN  C+ G    A  +F
Sbjct: 187 PFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIF 246

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            E+           +P TV+++ +I+GLCK   +D+   L   M+   + P+V TY+ LI
Sbjct: 247 NEIRKRG------LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           HG C     + A+ L  EM  +G++PN ++   +++  C++ ++D+A      M+   V+
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+   YNTL++G C  G +N+ ++L   M  +G K D  +Y  LI+GYCK  ++E A+ +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 320 YNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              +  +G+    V +  L  G      +R AER L+  VE     +  D  TY   IDG
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA---GMKPDDATYTMVIDG 477

Query: 377 LCVRPQVRFTY 387
            C +  V+  +
Sbjct: 478 YCKKGNVKMGF 488



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P V  Y  LI+ FC      +AK +  E+  +G++P  VS N ++N LCK+  +D   RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M +  + P+ FTY+ L+ G C  G+++  ++LF  M+  G + +  ++  LI+G C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           ++ ++ A++ Y+++   G+KP +V YNTL +GL ++    +A KL  EM+   +  D  T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 370 YRTFIDGLCVRPQVRFTYARRKG 392
           Y T IDG C    +      RKG
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKG 423


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 199/406 (49%), Gaps = 44/406 (10%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +HP     +S  IL  C  +NK  D    +F  +   G   +  +Y+ LI+  C+ G+++
Sbjct: 225 LHPDTFTYTSL-ILGHC--RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  +      P V T+T LI  L    R VEA  LF ++K  GCEPNV TY  LI
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD--------- 174
           +GLC+      A  +  EM+    E G++  P+ VTY+ +IDG CKEG +D         
Sbjct: 342 DGLCKENKMDEARKMLSEMS----EKGLI--PSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 175 --------------------------KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                                     KA  L  +M    L+P+++TY SLIHG C  ND 
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A  LL  M + G+ P+  + +V ++ LCK G+++ A  L D +    V+ N   Y  L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  GKI+    L   M +  C  + ++YN+LI G CK K+++EA SL  ++   G+
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           KPTVVTY  L   + +    + ALK+F  M       D CTY  F+
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 196/375 (52%), Gaps = 14/375 (3%)

Query: 30  VLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           VL +F+++N+ G F   P L  Y+ ++    K   +     ++  +L +  +PN+ TF +
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++ G C    +VEA    +K+   G  P+  TY +LI G CR      A  +F  M    
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            +       N V+Y+ +I GLC+ G +++A +LF  M  +N  P V TYT LI+    + 
Sbjct: 260 CQ------RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              EA  L  EM ++G +PNV +  V+++ LCK  KMD A ++L  M +  + P+  TYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+DG+C  G I+   E+   MES  C  +  +YN LI G CK ++V +A++L N++  +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-- 384
            + P+++TYN+L HG  ++   E A +L   M  N +  D  TY  FID LC   +V   
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 385 ---FTYARRKGNSGN 396
              F   + KG   N
Sbjct: 494 GTLFDSVKAKGVKAN 508



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 195/380 (51%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N +L  L+K    D + +++  L +  + P++YT++ ++N +CK+G V    + 
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +I+++   P+  T+TSLI G C    +  A  +F  +   GC+ N ++Y  LI+GLC 
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL LF +MT  N        P   TY+++I  L   G   +A  LF +MK +  
Sbjct: 277 AGRINEALKLFADMTEDN------CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TYT LI G C  N  +EA+ +L EM ++G+ P+VV+ N +++  CK G +D+A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LDLM      PN  TYN L+ G C   K+++   L   M          +YN LI+G C
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E A  L + +   G+ P   TY+     L +  + E A  LF  ++   V A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            Y   IDG C   ++   Y+
Sbjct: 511 IYTALIDGYCKVGKIDVAYS 530



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 6/344 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           GL PD +TY+ LI   C+   V   + +F  + +     N V++T+LI GLC   RI EA
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF  +    C P V TY  LI  L  +G  + ALNLF EM     E      PN  TY
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE------PNVHTY 337

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +++IDGLCKE  +D+A+++  +M  + L P+VVTY +LI G+C     ++A  +L  M  
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
               PN  + N ++  LCK  K+  A  LL+ M++  + P+  TYN+L+ G C    +  
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L   M   G   D ++Y++ I+  CK   VEEA +L++ +  KG+K   V Y  L  
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G  ++ + + A  L   M  +    ++ TY   I+GLC   +++
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L K    D    +   ++  GL P + TY+ LI+ +CK G +   F I
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN  T+  LI GLC + ++ +A AL  K+      P++ITYN+LI+G C+
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   M N NG +     P+  TYS+ ID LCKEG V++A  LF  +K + +
Sbjct: 452 VNDLESAYRLLSLM-NENGLV-----PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V YT+LI G+C     + A  LL  M++    PN  + NV++  LCK  KM  AS 
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   V+P   TY  L+      G  +   ++F  M S+G + D  +Y   ++ Y 
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
               +EE   +  ++  +GI P +VTY  L  G   +    RA
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 35/404 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++ +  L K    +   +LF  + + G+  +   Y+ LI+ +CK+G++ + + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L     PN  T+  LI+GLC E ++ EA++L  K+   G +P V+TY  LI  + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M      + + ++P+  TY+  +     +G +++  ++  +M  E +
Sbjct: 592 DGAFDHALKVFNHM------VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN--- 245
            P++VTYT LI G+      + A   L  MVD G +P++   ++++  L    +M     
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705

Query: 246 --------------------------ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
                                     A +L + MV+     +   Y  L+ GFC   ++ 
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             + L   M+  G    +  YN L++  CK     EA+ L + +   G+ P + +Y  L 
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            GL+     E+A  +F  +       D   ++  IDGL  R  V
Sbjct: 826 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 869



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 35/342 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+  L K K      SL  ++ ++G+ P + TY+ILI    K G       +
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++   + P+V T+T+ +    ++  + E   +  K+   G  P+++TY  LI+G  R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK----------- 177
            G T  A +  K M +         KP+    SI+I  L  E  + + +           
Sbjct: 662 LGLTHRAFDFLKCMVDTG------CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV 715

Query: 178 ------------------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
                             +LF +M       +V  Y +LI GFC      EA+GL+  M 
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G+ P+    N +++  CK G    A RL+D MV+  + P   +Y  L+ G  + G   
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + K +F  + S G  +D+ ++ +LI+G  K   V+E   L +
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 877



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 35/311 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+G + K+  +D  L +F  + S+G  PD+ TY+  ++ +   G +     +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
             ++      P++VT+T LI G         A      +   GC+P++   + LI  L  
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 128 ----------------------------RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
                                       +T    +AL LF++M      I V        
Sbjct: 697 ENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSI------ 750

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I G C++  +++A+ L   MK   ++P+   Y SL+   C    + EA  L+  MV
Sbjct: 751 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 810

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G+ P + S  +++  L   G  + A  +   ++ C    +   +  L+DG      ++
Sbjct: 811 ENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 870

Query: 280 RVKELFVSMES 290
              EL   ME 
Sbjct: 871 ECSELIDIMEE 881


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 198/405 (48%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L  +  ++    ++K+L   G   D + Y++LI  F + GQ+     +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+  T+  L+  L    R+ EA + F  +   G  PN+ TYN L++   +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL LF EM          F+P+ VTY+I++D LC  G V  A++LF +M  +  
Sbjct: 183 VGQLDMALGLFAEMKRRG------FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY++L++G   +    EA  +  EMVD+GV  ++V+ N ++  L K G MD   +
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M +    P+AF++NT+MD      K +  +E+F  M   GCK D  SYNILI+ Y 
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 309 K-----------------------------------NKEVEEALSLYNELPFKGIKPTVV 333
           +                                   + +V+EA ++  E+   G +P VV
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN L   L +  + +RA +LF +M+   V  DT +Y   IDGL 
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   ++  L+  L K        S F  +   GL P++ TY++L++ F K+GQ+ +  
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + R  F P+VVT+  L+  LC+  R+  A  LF K+   GC P+  TY+TL+NGL
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            ++G    A  +F+EM +     GV    + V Y+ ++  L K G +D+  +L  +M  +
Sbjct: 251 GKSGRVEEAHKVFREMVDR----GVAV--DLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P+  ++ +++     AN  + A+ +   MV+ G +P+++S N++++   + G    A
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            ++L+ MV+    P   TYN+L+      G+++    +   ME+ GC+ D  +YN L++ 
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDM 424

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K  E + A  L+ ++  KG++P  ++Y     GL    + + AL LF +M+      D
Sbjct: 425 LGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVD 484

Query: 367 TCTYRTFI 374
              YR  I
Sbjct: 485 KAMYRILI 492



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 10/361 (2%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +L  LA     D + +L K + + G  L P+  T   LI  + +  +    F +F +   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAES 58

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
              +P V  FT LI  L        A  ++ KL   GC+ +   YN LI    R+G    
Sbjct: 59  FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A+ +F+EM     E      P+  TY  +++ L K G V +A+  F  M    L PN+ T
Sbjct: 119 AMEMFREMKIKGSE------PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPT 172

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  L+  F      + A GL  EM  +G QP+VV+ N++++ LC  G++  A +L   M 
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+++TY+TL++G   +G++    ++F  M   G   D  +YN L+    K   ++
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
               L  E+  KG  P   ++NT+   L +  + + A ++F  M  +    D  +Y   I
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 375 D 375
           D
Sbjct: 353 D 353



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           V  GR LR    PN  T   LI      ++  +A  LF + ++F C P V  +  LI+ L
Sbjct: 22  VAEGRPLR----PN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             +G    A  ++K++     ++      +   Y+++I    + G +D A E+F +MK +
Sbjct: 76  VNSGEFERAELVYKKLVQKGCQL------DRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+  TY  L++    A    EA+     M+++G+ PN+ + N++M+   K G++D A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M +   +P+  TYN L+D  C  G++   ++LF  M   GC  D ++Y+ L+NG
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K+  VEEA  ++ E+  +G+   +V YN+L   L +    +R  KL  EM       D
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 367 TCTYRTFIDGL 377
             ++ T +D L
Sbjct: 310 AFSFNTIMDAL 320



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 4/214 (1%)

Query: 167 LCKEGFVDKAKELFLQMKYEN--LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           L   G +D  + L  +M  E   L PN  T   LI  +   N   +A  L  +       
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P V +   +++ L  +G+ + A  +   +VQ   + + F YN L+  F  +G+++   E+
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M+  G + D+++Y  L+N   K   V+EA S ++ +  +G+ P + TYN L     +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + Q + AL LF EM+         TY   +D LC
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALC 216


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 199/406 (49%), Gaps = 44/406 (10%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +HP     +S  IL  C  +NK  D    +F  +   G   +  +Y+ LI+  C+ G+++
Sbjct: 225 LHPDTFTYTSL-ILGHC--RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  +      P V T+T LI  L    R VEA  LF ++K  GCEPNV TY  LI
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD--------- 174
           +GLC+      A  +  EM+    E G++  P+ VTY+ +IDG CKEG +D         
Sbjct: 342 DGLCKENKMDEARKMLSEMS----EKGLI--PSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 175 --------------------------KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                                     KA  L  +M    L+P+++TY SLIHG C  ND 
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A  LL  M + G+ P+  + +V ++ LCK G+++ A  L D +    V+ N   Y  L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  GKI+    L   M +  C  + ++YN+LI G CK K+++EA SL  ++   G+
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           KPTVVTY  L   + +    + ALK+F  M       D CTY  F+
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 196/375 (52%), Gaps = 14/375 (3%)

Query: 30  VLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           VL +F+++N+ G F   P L  Y+ ++    K   +     ++  +L +  +PN+ TF +
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++ G C    +VEA    +K+   G  P+  TY +LI G CR      A  +F  M    
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            +       N V+Y+ +I GLC+ G +++A +LF  M  +N  P V TYT LI+    + 
Sbjct: 260 CQ------RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              EA  L  EM ++G +PNV +  V+++ LCK  KMD A ++L  M +  + P+  TYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+DG+C  G I+   E+   MES  C  +  +YN LI G CK ++V +A++L N++  +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-- 384
            + P+++TYN+L HG  ++   E A +L   M  N +  D  TY  FID LC   +V   
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 385 ---FTYARRKGNSGN 396
              F   + KG   N
Sbjct: 494 GTLFDSVKAKGVKAN 508



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 195/380 (51%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N +L  L+K    D + +++  L +  + P++YT++ ++N +CK+G V    + 
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +I+++   P+  T+TSLI G C    +  A  +F  +   GC+ N ++Y  LI+GLC 
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL LF +MT  N        P   TY+++I  L   G   +A  LF +MK +  
Sbjct: 277 AGRINEALKLFADMTEDN------CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TYT LI G C  N  +EA+ +L EM ++G+ P+VV+ N +++  CK G +D+A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LDLM      PN  TYN L+ G C   K+++   L   M          +YN LI+G C
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E A  L + +   G+ P   TY+     L +  + E A  LF  ++   V A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            Y   IDG C   ++   Y+
Sbjct: 511 IYTALIDGYCKVGKIDVAYS 530



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 189/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN ++    K  +         ++   GL PD +TY+ LI   C+   V   + +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +     N V++T+LI GLC   RI EA  LF  +    C P V TY  LI  L  
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  + ALNLF EM     E      PN  TY+++IDGLCKE  +D+A+++  +M  + L
Sbjct: 312 SGRKVEALNLFNEMKEKGCE------PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G+C     ++A  +L  M      PN  + N ++  LCK  K+  A  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M++  + P+  TYN+L+ G C    +     L   M   G   D ++Y++ I+  C
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VEEA +L++ +  KG+K   V Y  L  G  ++ + + A  L   M  +    ++ 
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   I+GLC   +++
Sbjct: 546 TYNVLIEGLCKEKKMK 561



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L K    D    +   ++  GL P + TY+ LI+ +CK G +   F I
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN  T+  LI GLC + ++ +A AL  K+      P++ITYN+LI+G C+
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   M N NG +     P+  TYS+ ID LCKEG V++A  LF  +K + +
Sbjct: 452 VNDLESAYRLLSLM-NENGLV-----PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V YT+LI G+C     + A  LL  M++    PN  + NV++  LCK  KM  AS 
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   V+P   TY  L+      G  +   ++F  M S+G + D  +Y   ++ Y 
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
               +EE   +  ++  +GI P +VTY  L  G   +    RA
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 182/393 (46%), Gaps = 24/393 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++ +  L K    +   +LF  + + G+  +   Y+ LI+ +CK+G++ + + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L     PN  T+  LI+GLC E ++ EA++L  K+   G +P V+TY  LI  + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M      + + ++P+  TY+  +     +G +++  ++  +M  E +
Sbjct: 592 DGAFDHALKVFNHM------VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN--- 245
            P++VTYT LI G+      + A   L  MVD G +P++   ++++  L    +M     
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705

Query: 246 ---------------ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
                          A +L + MV+     +   Y  L+ GFC   ++   + L   M+ 
Sbjct: 706 EIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G    +  YN L++  CK     EA+ L + +   G+ P + +Y  L  GL+     E+
Sbjct: 766 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 825

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A  +F  +       D   ++  IDGL  R  V
Sbjct: 826 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 24/352 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+  L K K      SL  ++ ++G+ P + TY+ILI    K G       +
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++   + P+V T+T+ +    ++  + E   +  K+   G  P+++TY  LI+G  R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK----------- 177
            G T  A +  K M +         KP+    SI+I  L  E  + + +           
Sbjct: 662 LGLTHRAFDFLKCMVDTG------CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715

Query: 178 -------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
                  +LF +M       +V  Y +LI GFC      EA+GL+  M ++G+ P+    
Sbjct: 716 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 775

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N +++  CK G    A RL+D MV+  + P   +Y  L+ G  + G   + K +F  + S
Sbjct: 776 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 835

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            G  +D+ ++ +LI+G  K   V+E   L + +  KG +P  +TY+ L  GL
Sbjct: 836 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 3/128 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R M PS      +N LL C  K   Y   + L   +   GL P L +Y +L+      G 
Sbjct: 766 RGMSPSE---DIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                 +F  +L   +  + V +  LI GL     + E + L   ++  GC+PN +TY+ 
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSL 882

Query: 122 LINGLCRT 129
           LI GL RT
Sbjct: 883 LIEGLERT 890


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 204/406 (50%), Gaps = 36/406 (8%)

Query: 9   PPVSSFNILLGCLAKNKH----------------------YDTVLSLFKRLN-------- 38
           P V ++NILL  L KN                        Y TV+S   +L         
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           SI   P++  Y+ LIN FC+  +V   F++ G+++     PNV+T++++I  L     + 
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A A++ K+   GC PNV T+ +L+ G    G  + ALN++  M     E G  F+PN V
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM----AEEG--FEPNVV 355

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+ +I GLC  G + +A  +  +M+    +PNV TY +LI GF  A D   A  +  +M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G  PNVV    ++N LC++     A  L++ M   +  PN  T+NT + G C +G++
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                LF  ME  GC  +  +YN +++G  K   ++EAL L  E+  KG++  +VTYNT+
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           F G   + + E ALKL  +M    V  D  TY T     C++ +V+
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVK 581



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 191/371 (51%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS +N L+    +      V  L  ++   G+ P++ TYS +I+    +G V L   +
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAV 306

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++     +PNV TFTSL+KG     R++EA  ++ ++   G EPNV+ YNTLI+GLC 
Sbjct: 307 WAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCS 366

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++  +M   NG       PN  TY  +IDG  K G +  A E++ +M     
Sbjct: 367 HGKMGEAVSVSSKMER-NG-----CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV YTS+++  C ++ +++A  L+ +M      PN V+ N  +  LC +G+++ A  
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN 480

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M Q    PN  TYN ++DG     +I    EL   ME  G + +  +YN +  G+C
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFC 540

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVAADT 367
              + EEAL L  ++   G+KP  +TYNTL +      + + A++L  ++  G     + 
Sbjct: 541 NVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEV 600

Query: 368 CTYRTFIDGLC 378
             Y + + G+C
Sbjct: 601 AAYTSLLWGIC 611



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 30/365 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L+   + +  L+++ ++   G  P++YT++ L+  +   G+V     I
Sbjct: 282 PNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNI 341

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + R+    F PNVV + +LI GLC+  ++ EA ++ +K++  GC PNV TY  LI+G  +
Sbjct: 342 WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401

Query: 129 TGHTIVALNLF-KEMTNGNGEIGVVFK----------------------------PNTVT 159
            G  + A  ++ K MTNG     VV+                             PNTVT
Sbjct: 402 AGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVT 461

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++  I GLC  G V+ A  LF QM+    +PN+ TY  ++ G    N   EA  L+ EM 
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G++ N+V+ N I    C  GK + A +LL  M+   V+P+A TYNTL   +C+ GK+ 
Sbjct: 522 EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVK 581

Query: 280 RVKELFVSMESMGCKHDDFS-YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +L   + + G    + + Y  L+ G C    VEEA+   +++  +GI     T+N L
Sbjct: 582 TAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNAL 641

Query: 339 FHGLF 343
             GLF
Sbjct: 642 VRGLF 646



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 182/368 (49%), Gaps = 15/368 (4%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFK--RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++ I++  L +    D V  L +  +L  I    DL+    +IN + ++G       +F 
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFIN--VINTYRRVGLAEQALKMFY 138

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           RI      P V  +  L+  + +E+R      +++ +K  G EPNV TYN L+  LC+  
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM+N   E      P+ V+Y+ +I  + K G V++A+EL ++ +     P
Sbjct: 199 RVDGACKLLVEMSNKGCE------PDVVSYTTVISSMSKLGKVEEARELSIRFQ-----P 247

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV  Y +LI+GFC      E   LL +MV++G+ PNV++ + +++ L   G ++ A  + 
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M      PN +T+ +LM G+ + G++     ++  M   G + +  +YN LI+G C +
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++ EA+S+ +++   G  P V TY  L  G  +      A +++ +M  N    +   Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427

Query: 371 RTFIDGLC 378
            + ++ LC
Sbjct: 428 TSMVNVLC 435



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 35/281 (12%)

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           ++A N F+ + N        F+   +TY I+I+ L +E  VD  + L  QMK E ++ + 
Sbjct: 60  VLASNYFRSIANSKA-----FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSE 114

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             + ++I+ +       +A  +   + + G QP V   N +++ +    +      +   
Sbjct: 115 DLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSN 174

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS------------- 299
           M +    PN +TYN L+   C   +++   +L V M + GC+ D  S             
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 300 -----------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
                            YN LING+C+  +V+E   L  ++  KGI P V+TY+T+   L
Sbjct: 235 VEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             I   E AL ++ +M     + +  T+ + + G  +R +V
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 42/231 (18%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN  +  L  +   +  ++L                      FC+M Q      
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINL----------------------FCQMEQYGC--- 490

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
                     +PN+ T+  ++ GL  E+RI EA  L T+++  G E N++TYNT+  G C
Sbjct: 491 ----------SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFC 540

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY-E 186
             G    AL L  +M  G        KP+ +TY+ +    C +G V  A +L  ++    
Sbjct: 541 NVGKFEEALKLLGKMLVGG------VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
              P V  YTSL+ G C+     EA   L +M+++G+  N  + N ++  L
Sbjct: 595 KWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N + G       ++  L L  ++   G+ PD  TY+ L   +C  G+V     +  ++
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590

Query: 73  LRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT-G 130
                + P V  +TSL+ G+C +  + EA     K+   G   N  T+N L+ GL  + G
Sbjct: 591 SAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLG 650

Query: 131 H 131
           H
Sbjct: 651 H 651


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 183/347 (52%), Gaps = 10/347 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLG 65
           + P V S+  L+  L K    D    LF+++ + G   P+ +TY+ L++  CK  ++   
Sbjct: 92  AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAA 151

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +     +  FAP+VVT+ +L+  L    R+ EA A FT++   G  P ++++N +I G
Sbjct: 152 RAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITG 211

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR      AL +F EM + +      F PN VTYS++IDGLCK   +D+A++L  +M  
Sbjct: 212 LCRARRLADALEVFNEMIDRD------FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           E   P++V YT L+ GF  A   + A GLL  MV QG  P+VV+  V++++LCK G++D+
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +   +V     PN  TY+ L+ G+C   + +RV E    M  M C+ +  +YN +I 
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALIGGYC---RASRVDEGGKVMREMACRPNVVTYNTMIW 382

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           G       EEA  ++ E+   G  P   TY  L   L  I Q    L
Sbjct: 383 GLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPHVL 429



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 190/377 (50%), Gaps = 13/377 (3%)

Query: 5   HPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +P   P SS  +N+L+         D   SL + ++  G+  +  T SI++   C+ G+V
Sbjct: 17  NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRV 76

Query: 63  SLGFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYN 120
           +     F   L    A P+VV++T+LI GLC   R+  A  LF K+  A GC PN  TYN
Sbjct: 77  AQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYN 136

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L++GLC+      A  +  E    +      F P+ VTY+ ++  L + G VD+A   F
Sbjct: 137 ALVDGLCKQDRLDAARAVITEARKRD------FAPDVVTYNTLMAALFQLGRVDEALATF 190

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QM  E   P +V++ ++I G C A    +A  +  EM+D+   PN+V+ +V+++ LCK+
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++D A +LLD MV    RP+   Y  L+ GF   G+++    L   M S GC  D  +Y
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ++I+  CK   V++A  ++ EL      P VVTY+ L  G     + +   K+  EM  
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA- 369

Query: 361 NDVAADTCTYRTFIDGL 377
                +  TY T I GL
Sbjct: 370 --CRPNVVTYNTMIWGL 384



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 188/349 (53%), Gaps = 18/349 (5%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS--CFAPNVV 82
           +H+D  L L          PD+ +Y+ LIN  CK+G+V   F +F +++ +  C  PN  
Sbjct: 81  EHFDASLELAHAQ------PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAF 133

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           T+ +L+ GLC + R+  A A+ T+ +     P+V+TYNTL+  L + G    AL  F +M
Sbjct: 134 TYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 193

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           T    E G V  P  V+++ II GLC+   +  A E+F +M   + +PN+VTY+ +I G 
Sbjct: 194 T----EEGYV--PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C ++  +EA+ LL  MV +G +P++V+   ++      G++D+A  LL  MV     P+ 
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY  ++D  C  G+++   E+F  + +  C  +  +Y+ LI GYC+   V+E   +  E
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 367

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +     +P VVTYNT+  GL  + + E A  +F EM       D  TYR
Sbjct: 368 M---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 184/364 (50%), Gaps = 7/364 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           + +   ++  L LF R N   L     TY++LI  FC    +   F +   +       N
Sbjct: 1   MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 81  VVTFTSLIKGLCAESRIVEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
             T + +++GLC   R+ +A   F   L+    +P+V++Y TLINGLC+ G    A +LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           ++M    G      +PN  TY+ ++DGLCK+  +D A+ +  + +  +  P+VVTY +L+
Sbjct: 120 RKMVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLM 174

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
                    +EA     +M ++G  P +VS N I+  LC+  ++ +A  + + M+  D  
Sbjct: 175 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 234

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           PN  TY+ ++DG C + +++  ++L   M S GC+ D  +Y  L+ G+     ++ AL L
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
              +  +G  P VVTY  +   L ++ + + A ++F E+  N  + +  TY   I G C 
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354

Query: 380 RPQV 383
             +V
Sbjct: 355 ASRV 358


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 199/388 (51%), Gaps = 11/388 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  ++   P   S+N++L  L          ++F  + S G+ P +YT+ +++   C + 
Sbjct: 160 MWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + +    PN V + +LI  LC  +R+ EA  L   +    CEP+V T+N
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFN 279

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+GLCR G    A  L   M          F  + +TY  ++ GLC+ G VD+A+ L 
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRG------FSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCK 239
            ++     NPN V Y +LI G+  +  + EAK LL   MV  G +P+  + N++++ L K
Sbjct: 334 NKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G + +A  LL+ MV     PN  TY  L++GFC  G++    E+  SM + G   +   
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI   CK+  +EEAL L+ E+  KG KP + T+N+L +GL +  + E AL L+ +M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVRFTY 387
              V A+T TY T +    +R  ++  +
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAF 537



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 189/377 (50%), Gaps = 11/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L +         L  R+   G   D  TY  L++  C+MGQV     +
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLC 127
             +I      PN V + +LI G  A  R  EA   L+  +   G EP+  T+N +I+GL 
Sbjct: 333 LNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV 388

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + AL L  EM      +   F+PN +TY+I+I+G CK+G +++A E+   M  + 
Sbjct: 389 KKGYLVSALELLNEM------VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+ N V Y  LI   C   +  EA  L  EM  +G +P++ + N ++N LCKN KM+ A 
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEAL 502

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M    V  N  TYNTL+  F +   I +  +L   M   GC  D+ +YN LI   
Sbjct: 503 SLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKAL 562

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   VE+ L L+ E+  KGI PT+++ N L  GL    +   ALK   +M    +  D 
Sbjct: 563 CKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDI 622

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY + I+GLC    V+
Sbjct: 623 VTYNSLINGLCKMGHVQ 639



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 177/333 (53%), Gaps = 6/333 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P  V    ++ G +A  +  +    L+  +   G  PD YT++I+I+   K G +   
Sbjct: 337 PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++   F PNV+T+T LI G C + R+ EAA +   + A G   N + YN LI  
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G+   AL LF EM+ G G      KP+  T++ +I+GLCK   +++A  L+  M  
Sbjct: 457 LCKDGNIEEALQLFGEMS-GKG-----CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           E +  N VTY +L+H F   +   +A  L+ EM+ +G   + ++ N ++  LCK G ++ 
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              L + M+   + P   + N L+ G C TGK+N   +    M   G   D  +YN LIN
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           G CK   V+EA +L+N+L  +GI+P  +TYNTL
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTL 663



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 172/332 (51%), Gaps = 6/332 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FNI++  L K  +  + L L   + +    P++ TY+ILIN FCK G++     I
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     + N V +  LI  LC +  I EA  LF ++   GC+P++ T+N+LINGLC+
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+L+ +M       GV+   NTVTY+ ++        + +A +L  +M +   
Sbjct: 495 NHKMEEALSLYHDMFLE----GVI--ANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C      +  GL  EM+ +G+ P ++S N++++ LC+ GK+++A +
Sbjct: 549 PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALK 608

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYN+L++G C  G +     LF  ++S G + D  +YN LI+ +C
Sbjct: 609 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                 +A  L  +    G  P  VT++ L +
Sbjct: 669 HEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 11/252 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L KN   +  LSL+  +   G+  +  TY+ L++ F     +   F +
Sbjct: 480 PDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKL 539

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +L R C   N+ T+  LIK LC    + +   LF ++   G  P +I+ N LI+GLC
Sbjct: 540 VDEMLFRGCPLDNI-TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           RTG    AL   ++M +          P+ VTY+ +I+GLCK G V +A  LF +++ E 
Sbjct: 599 RTGKVNDALKFLQDMIHRG------LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ +TY +LI   CH   +N+A  LL + VD G  PN V+ ++++N + K  K+   +
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK--KIPWGA 710

Query: 248 RLL-DLMVQCDV 258
           R   D  V+C V
Sbjct: 711 RFSKDFTVECGV 722


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN +L  L K++ +D    +F+ ++   + PD+ +++ILI  FC++G+V      
Sbjct: 225 PGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKF 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + +    P+VV+F+ LI       ++  AAA   ++K  G  P+ + Y  +I G CR
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCR 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +  EM      +G+   P+ VTY+ +++GLCK+  +  A+EL  +MK   +
Sbjct: 345 AGSMSEALRVRDEM------VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T+T+LIHG+C   ++ +A  L   ++ Q ++P+VV+ N +++ +C+ G +  A+ 
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M   ++ PN  TY+ L+D  C  G++         M S G   +  +YN +I GYC
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  V++      ++    I P ++T+NTL HG  +      A  +F  M+   V  D  
Sbjct: 519 RSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578

Query: 369 TYRTFIDGL 377
           TY   I+G 
Sbjct: 579 TYNMIINGF 587



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SF+ L+G  +     D   +  + +  +GL PD   Y+++I  FC+ G +S    +
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVT+ +L+ GLC + R+++A  L  ++K  G  P++ T+ TLI+G CR
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL LF  + +         +P+ V Y+ +IDG+C++G + KA EL+  M    +
Sbjct: 415 DGNFEKALQLFDTLLHQR------LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+ LI   C      EA G L EMV +G  PN+++ N I+   C++G +    +
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ 528

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+Q ++ P+  T+NTL+ G+     ++    +F  ME    + D  +YN++ING+ 
Sbjct: 529 FLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +   +EEA  ++ ++   GI+P   TY +L +G      ++ A +L  EM     A D
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFNIL+G   +    +  +  +K +   G+ PD+ ++S LI  F   G++      
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V +T +I G C    + EA  +  ++   GC P+V+TYNTL+NGLC+
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L  EM     E GV   P+  T++ +I G C++G  +KA +LF  + ++ L
Sbjct: 380 QHRLLDAEELLNEMK----ERGVT--PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y SLI G C   D  +A  L  +M  + + PN V+ +++++  C+ G+++ A  
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD MV     PN  TYN+++ G+C +G + + ++    M       D  ++N LI+GY 
Sbjct: 494 FLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +  A +++N +  + ++P  VTYN + +G  E    E A ++F +M  + +  D  
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRY 613

Query: 369 TYRTFIDG 376
           TY + I+G
Sbjct: 614 TYMSLING 621



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++    K+  +D   ++   +    +FPD+ T+++LI+   + G V     +   +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P +VTF S++KGLC   R  +A  +F  +      P+V ++N LI G CR G  
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+  +KEM     + GV   P+ V++S +I      G +D A     +MK   L P+ 
Sbjct: 279 EEAMKFYKEMQ----QRGVT--PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V YT +I GFC A   +EA  +  EMV  G  P+VV+ N ++N LCK  ++ +A  LL+ 
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  V P+  T+ TL+ G+C  G   +  +LF ++     + D  +YN LI+G C+  +
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + +A  L++++  + I P  VTY+ L     E  Q E A     EM       +  TY +
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 373 FIDGLC 378
            I G C
Sbjct: 513 IIKGYC 518



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 13/362 (3%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           Y  VLS    +N+       YT +I+++ +CK  +      +   + + C  P+VVT   
Sbjct: 145 YRLVLSSDSEVNA-------YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI        +  A AL   +   G +P ++T+N+++ GLC+      A  +F+ M   +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   P+  +++I+I G C+ G V++A + + +M+   + P+VV+++ LI  F    
Sbjct: 258 ------VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             + A   L EM   G+ P+ V   +++   C+ G M  A R+ D MV     P+  TYN
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL++G C   ++   +EL   M+  G   D  ++  LI+GYC++   E+AL L++ L  +
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ 431

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            ++P VV YN+L  G+       +A +L+ +M   ++  +  TY   ID  C + QV   
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491

Query: 387 YA 388
           + 
Sbjct: 492 FG 493



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 7/373 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P P   F++L+    +++        F+ L    +       + L+    + G   L 
Sbjct: 83  PTPQP-QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLA 141

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              +  +L S    N  T   ++   C      +A  + ++++     P+V+T+N LI+ 
Sbjct: 142 EEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDA 201

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             R G    A+ L   M N         KP  VT++ ++ GLCK    DKAKE+F  M  
Sbjct: 202 RFRAGDVDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ 255

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            ++ P+V ++  LI GFC   +  EA     EM  +GV P+VVS + ++      GKMD+
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDH 315

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+  L  M    + P+   Y  ++ GFC  G ++    +   M  +GC  D  +YN L+N
Sbjct: 316 AAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLN 375

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK   + +A  L NE+  +G+ P + T+ TL HG       E+AL+LF  +    +  
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435

Query: 366 DTCTYRTFIDGLC 378
           D   Y + IDG+C
Sbjct: 436 DVVAYNSLIDGMC 448



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 8/290 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L K         L   +   G+ PDL T++ LI+ +C+ G       +
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P+VV + SLI G+C +  + +A  L+  + A    PN +TY+ LI+  C 
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A     EM + GN        PN +TY+ II G C+ G V K ++   +M  +N
Sbjct: 485 KGQVEEAFGFLDEMVSKGN-------LPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+++T+ +LIHG+    + + A  +   M  + VQP+ V+ N+I+N   + G M+ A 
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           R+   M    + P+ +TY +L++G    G      +L   M   G   DD
Sbjct: 598 RVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 96/202 (47%)

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +E+   +   +  P    +  LI  +  +    EA      ++D  V     +SN ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           L + G    A     L++  D   NA+T N ++  +C + + ++   +   ME      D
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             ++N+LI+   +  +V+ A++L + +  KG+KP +VT+N++  GL + R+ ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M    VA D  ++   I G C
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFC 273


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 193/374 (51%), Gaps = 9/374 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SFN+++  L K +  D  + +F+ +      PD YTY  L++  CK  ++    ++   +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +P+ V +  LI GLC +  +     L   +   GC PN +TYNTLI+GLC  G  
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++L + M +          PN VTY  +I+GL K+     A  L   M+    + N 
Sbjct: 309 DKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y+ LI G        EA  L  +M ++G +PN+V  +V+++ LC+ GK + A  +L+ 
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+     PNA+TY++LM GF  TG      +++  M+  GC  + F Y++LI+G C    
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM---QGNDVAADTCT 369
           V+EA+ +++++   GIKP  V Y+++  GL  I   + ALKL+ EM   +      D  T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542

Query: 370 YRTFIDGLCVRPQV 383
           Y   +DGLC++  +
Sbjct: 543 YNILLDGLCMQKDI 556



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 175/341 (51%), Gaps = 10/341 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP PV  +N+L+  L K      V  L   +   G  P+  TY+ LI+  C  G++    
Sbjct: 254 SPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  R++ S   PN VT+ +LI GL  + R  +A  L + ++  G   N   Y+ LI+GL
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A++L+++M     E G   KPN V YS+++DGLC+EG  ++AKE+  +M   
Sbjct: 373 FKEGKAEEAMSLWRKM----AEKGC--KPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN  TY+SL+ GF       EA  +  EM   G   N    +V+++ LC  G++  A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNIL 303
             +   M+   ++P+   Y++++ G C  G ++   +L+  M   E    + D  +YNIL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           ++G C  K++  A+ L N +  +G  P V+T NT  + L E
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 146/281 (51%), Gaps = 3/281 (1%)

Query: 99  EAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           +A  LF ++   F C+ +V ++N+++N +   G     L  +  + N N  + +   PN 
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           ++++++I  LCK  FVD+A E+F  M      P+  TY +L+ G C     +EA  LL E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G  P+ V  NV+++ LCK G +   ++L+D M      PN  TYNTL+ G CL GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +++   L   M S  C  +D +Y  LING  K +   +A+ L + +  +G       Y+ 
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  GLF+  +AE A+ L+ +M       +   Y   +DGLC
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 19/272 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +++L+  L +    +    +  R+ + G  P+ YTYS L+  F K G       +
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + ++  + N   ++ LI GLC   R+ EA  +++K+   G +P+ + Y+++I GLC 
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L+ EM           +P+ VTY+I++DGLC +  + +A +L   M     
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKS---QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571

Query: 189 NPNVVTYTSLIHGFCH-ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +P+V+T  + ++     +N  ++ +  L E+V +               L K  ++  A 
Sbjct: 572 DPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR---------------LLKRQRVSGAC 616

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            ++++M+   + P   T+  ++   C   KIN
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 5/236 (2%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           FK    T S +I+     G  D  ++L  +++ EN      ++  +   +  A+  ++A 
Sbjct: 73  FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132

Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD----VRPNAFTYNT 267
            L   MVD+   + +V S N ++N +   G         D +V  +    + PN  ++N 
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++   C    ++R  E+F  M    C  D ++Y  L++G CK + ++EA+ L +E+  +G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P+ V YN L  GL +     R  KL   M       +  TY T I GLC++ ++
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 18/181 (9%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L+  L         + ++ ++ +IG+ PD   YS +I   C +G +     ++  +L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529

Query: 74  ---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL---- 126
                   P+VVT+  L+ GLC +  I  A  L   +   GC+P+VIT NT +N L    
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589

Query: 127 --CRTGHT----IVALNLFKEMTNGNGEI-----GVVFKPNTVTYSIIIDGLCKEGFVDK 175
             C  G +    +V   L ++  +G   I     G    P T T+++I+  +CK   ++ 
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649

Query: 176 A 176
           A
Sbjct: 650 A 650


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 205/377 (54%), Gaps = 9/377 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+S N L+  L K      +  ++K +    + P L +++I+IN  CK+G+++    I  
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRI---VEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            +     + NV+T+ +LI G C   +I    +A A+  +++A G  PN +T+N LI+G C
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +  +   A+ +F EM N  G      KPN VTY+ +I+GLC  G V++A  L  QM    
Sbjct: 248 KDKNVSAAMKVFAEM-NRQG-----VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN++T+ +L++GFC      +A  L  +M  QG+ PNV + N++++  CK+  M++A 
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L  +M+   V P+  TYN L+ G C  G +   + L   M++   K D  +YNILI+  
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   E+++AL L +E+  KG+KP+ +TYNT+  G  +      AL L  +M+     A+ 
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY   I G C + ++ 
Sbjct: 482 ATYNVLIKGFCKKDKLE 498



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +IL+   AKN         FKR +  GL   + + + L++   K+G++     ++  ++R
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT-- 132
               P +++F  +I GLC   ++ +A  +   +K  G   NVITYNTLI+G C+ G    
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 133 -IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + KEM       G+   PN VT++I+IDG CK+  V  A ++F +M  + + PN
Sbjct: 217 MYKADAILKEMRAD----GIC--PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVTY SLI+G C+    NEA  L  +MV+  ++PN+++ N ++N  CKN  +  A  L D
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  + PN  TYN L+D +C    +     L+  M   G   D  +YN LI G C+  
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++E A +L +E+  K +K  ++TYN L   L    + ++AL+L  EM    +     TY 
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450

Query: 372 TFIDGLCVRPQVR 384
           T IDG C    +R
Sbjct: 451 TMIDGYCKEGNLR 463



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 180/327 (55%), Gaps = 9/327 (2%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCF 77
           +G + K    D +L   K + + G+ P+  T++ILI+ FCK   VS    +F  + R   
Sbjct: 211 MGKIGKMYKADAIL---KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV 267

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
            PNVVT+ SLI GLC   ++ EA AL  ++     +PN+IT+N L+NG C+      A  
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF +M            PN  TY+I+ID  CK+  ++ A  L+  M  + + P+V TY  
Sbjct: 328 LFDDMPKQG------ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI G C   D   A+ L+ EM  + ++ ++++ N++++ LC  G+M  A RLLD M +  
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++P+  TYNT++DG+C  G +     L   ME +G   +  +YN+LI G+CK  ++E+A 
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFE 344
            L NE+  KG+ P  +TY  +   + E
Sbjct: 502 GLLNEMLEKGLIPNRMTYEIVTEEMME 528



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 183/366 (50%), Gaps = 9/366 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + SFNI++  L K    +    + + +   G+  ++ TY+ LI+ +CKMG++   +  
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             I   +      PN VTF  LI G C +  +  A  +F ++   G +PNV+TYN+LING
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G    A  L  +M N         KPN +T++ +++G CK   V +A ELF  M  
Sbjct: 281 LCNNGKVNEATALRDQMVNS------CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPK 334

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PNV TY  LI  +C   +  +A  L   M+ +GV P+V + N ++  LC+ G ++ 
Sbjct: 335 QGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEA 394

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  M    ++ +  TYN L+D  C  G++ +   L   M   G K    +YN +I+
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCK   +  AL+L +++   G    V TYN L  G  +  + E A  L  EM    +  
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514

Query: 366 DTCTYR 371
           +  TY 
Sbjct: 515 NRMTYE 520



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 121/233 (51%), Gaps = 6/233 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N LL    KNK       LF  +   G+ P++ TY+ILI+ +CK   +   F +
Sbjct: 304 PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFAL 363

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L     P+V T+  LI GLC +  +  A  L +++     + ++ITYN LI+ LC 
Sbjct: 364 YRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L  EM           KP+ +TY+ +IDG CKEG +  A  L  QM+    
Sbjct: 424 KGEMKKALRLLDEMCRKG------LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             NV TY  LI GFC  +   +A GLL EM+++G+ PN ++  ++  E+ + G
Sbjct: 478 LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 124/238 (52%), Gaps = 3/238 (1%)

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G  F  N++   I++    K        E F +     L  +V +   L+ G     +  
Sbjct: 86  GDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIG 145

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           + + +  EM+ + ++P ++S N+++N LCK GK++ A  +++ M    V  N  TYNTL+
Sbjct: 146 DMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205

Query: 270 DGFCLTGKINRV---KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           DG+C  GKI ++     +   M + G   ++ ++NILI+G+CK+K V  A+ ++ E+  +
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G+KP VVTYN+L +GL    +   A  L  +M  + +  +  T+   ++G C    V+
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D G++ +V S N +M+ L K G++ +   +   M++  + P   ++N +++G C  GK+N
Sbjct: 121 DYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE---ALSLYNELPFKGIKPTVVTYN 336
           +  ++   M+  G   +  +YN LI+GYCK  ++ +   A ++  E+   GI P  VT+N
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFN 240

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            L  G  + +    A+K+F EM    V  +  TY + I+GLC   +V    A R
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS++N L+  L +    +   +L   +++  L  DL TY+ILI+  C  G++     +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+ +T+ ++I G C E  +  A  L ++++  G   NV TYN LI G C+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
                 A  L  EM     E G++  PN +TY I+ + + ++GFV
Sbjct: 494 KDKLEDANGLLNEML----EKGLI--PNRMTYEIVTEEMMEKGFV 532


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 180/337 (53%), Gaps = 10/337 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKMGQVSLG 65
           + P V S+  L+  L K    D    LF+++ + G   P+ +TY+ L++  CK  ++   
Sbjct: 42  AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAA 101

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +     +  FAP+VVT+ +L+  L    R+ EA A FT++   G  P ++++N +I G
Sbjct: 102 RAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITG 161

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR      AL +F EM + +      F PN VTYS++IDGLCK   +D+A++L  +M  
Sbjct: 162 LCRARRLADALEVFNEMIDRD------FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           E   P++V YT L+ GF  A   + A GLL  MV QG  P+VV+  V++++LCK G++D+
Sbjct: 216 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 275

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +   +V     PN  TY+ L+ G+C   + +RV E    M  M C+ +  +YN +I 
Sbjct: 276 AHEIFRELVANKCSPNVVTYSALIGGYC---RASRVDEGGKVMREMACRPNVVTYNTMIW 332

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           G       EEA  ++ E+   G  P   TY  L   L
Sbjct: 333 GLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 187/349 (53%), Gaps = 18/349 (5%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS--CFAPNVV 82
           +H+D  L L          PD+ +Y+ LIN  CK+G+V   F +F +++ +  C  PN  
Sbjct: 31  EHFDASLELAHAQ------PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAF 83

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           T+ +L+ GLC + R+  A A+  + +     P+V+TYNTL+  L + G    AL  F +M
Sbjct: 84  TYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           T    E G V  P  V+++ II GLC+   +  A E+F +M   + +PN+VTY+ +I G 
Sbjct: 144 T----EEGYV--PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C ++  +EA+ LL  MV +G +P++V+   ++      G++D+A  LL  MV     P+ 
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY  ++D  C  G+++   E+F  + +  C  +  +Y+ LI GYC+   V+E   +  E
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 317

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +     +P VVTYNT+  GL  + + E A  +F EM       D  TYR
Sbjct: 318 M---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 171/332 (51%), Gaps = 11/332 (3%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTK 106
           T SI++   C+ G+V+     F   L    A P+VV++T+LI GLC   R+  A  LF K
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71

Query: 107 L-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           +  A GC PN  TYN L++GLC+      A  +  E    +      F P+ VTY+ ++ 
Sbjct: 72  MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRD------FAPDVVTYNTLMA 125

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
            L + G VD+A   F QM  E   P +V++ ++I G C A    +A  +  EM+D+   P
Sbjct: 126 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 185

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N+V+ +V+++ LCK+ ++D A +LLD MV    RP+   Y  L+ GF   G+++    L 
Sbjct: 186 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLL 245

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M S GC  D  +Y ++I+  CK   V++A  ++ EL      P VVTY+ L  G    
Sbjct: 246 RRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRA 305

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +   K+  EM       +  TY T I GL
Sbjct: 306 SRVDEGGKVMREMA---CRPNVVTYNTMIWGL 334



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 162/305 (53%), Gaps = 6/305 (1%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           N  T + +++GLC   R+ +A   F   L+    +P+V++Y TLINGLC+ G    A +L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F++M    G      +PN  TY+ ++DGLCK+  +D A+ +  + +  +  P+VVTY +L
Sbjct: 69  FRKMVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +         +EA     +M ++G  P +VS N I+  LC+  ++ +A  + + M+  D 
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN  TY+ ++DG C + +++  ++L   M S GC+ D  +Y  L+ G+     ++ AL 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L   +  +G  P VVTY  +   L ++ + + A ++F E+  N  + +  TY   I G C
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 379 VRPQV 383
              +V
Sbjct: 304 RASRV 308



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 10/207 (4%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-----QPNVVSSNVIMNEL 237
           M  E +  N  T + ++ G C      +A    +E  D  +     QP+VVS   ++N L
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQA----LEHFDASLELAHAQPDVVSYTTLINGL 56

Query: 238 CKNGKMDNASRLLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           CK G++D A  L   MV     RPNAFTYN L+DG C   +++  + +           D
Sbjct: 57  CKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPD 116

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +YN L+    +   V+EAL+ + ++  +G  PT+V++N +  GL   R+   AL++F 
Sbjct: 117 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 176

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           EM   D   +  TY   IDGLC   Q+
Sbjct: 177 EMIDRDFHPNLVTYSVVIDGLCKSDQL 203



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  L K    D    +F+ L +    P++ TYS LI  +C+  +V  G   
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG--- 311

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            G+++R     PNVVT+ ++I GL    R  EA  +F ++   G  P+  TY  L   L 
Sbjct: 312 -GKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALR 370

Query: 128 RTGH 131
              H
Sbjct: 371 MIDH 374


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 189/371 (50%), Gaps = 14/371 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N  L  L +   +   + LF+    +   P+ +TY  LI+  CK G++   + +   + 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P V     +IKGLC   R  +A   F  +    C P++IT+N L++ L ++G   
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M   +  +     PN VTY+ +I+GLCK+G +D+A EL   M      PNV+
Sbjct: 118 EAFQIFESMHTSSQCL-----PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY+ L+ G C A   ++   LL EM  +G QP+V+  N ++N LCK+ ++D A  L+ LM
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++    P   TYN+LM+ FC + +++R   L   M   GC  D  +YN +I G C++  +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA------ERALKLFVEMQGNDVAADT 367
           ++A +L  ++      P V+TY+T+  GL +  +       E A ++   M+      + 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 368 CTYRTFIDGLC 378
            TY   I+GLC
Sbjct: 353 GTYAVVIEGLC 363



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 195/378 (51%), Gaps = 15/378 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V+  N ++  L K   +   L  FK +      PD+ T++IL++   K G+V   F 
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 68  IFGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           IF  +  S  C  PNVVT+T++I GLC + ++  A  L   +   GC PNVITY+ L+ G
Sbjct: 122 IFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G T     L +EMT         F+P+ + Y+ +++GLCK   +D+A EL   M  
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRG------FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P VVTY SL+  FC +   + A  L+  M ++G  P+V++ N ++  LC++ ++D+
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFC------LTGKINRVKELFVSMESMGCKHDDFS 299
           A  LL  MV     P+  TY+T++DG C         K+    E+   M+  GC  +  +
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y ++I G C+ ++ ++AL+L   +    + P + +++ +   L +    + A K+F  M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 360 GNDVAADTCTYRTFIDGL 377
             +   +   Y   IDGL
Sbjct: 415 ERECKPNPVAYAALIDGL 432



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 16/384 (4%)

Query: 4   MHPSP---PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MH S    P V ++  ++  L K+   D  + L   +N  G  P++ TYS+L+   CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +   GF +   + R  F P+V+ + +L+ GLC   R+ EA  L   +   GC P V+TYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +L+   CR+     A  L + M+    E G    P+ + Y+ +I GLC++  +D A+ L 
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMS----ERGC--PPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 181 LQMKYENLNPNVVTYTSLIHGFCH----ANDWN-EAKGLLIEMVDQ-GVQPNVVSSNVIM 234
            QM      P+V+TY+++I G C       DW  EA   ++EM+ Q G  PN  +  V++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC+  K   A  LL  M+  +V P+  +++ ++   C +  ++   ++F  M    CK
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +Y  LI+G  K  EV++A+ ++ EL  +  +P V TYN++  GL  + + E A+++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M   +   D  +Y   I GLC
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLC 502



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 13/377 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K    D    L   +   G+ P +  ++ +I   CK G+       
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLC 127
           F  +  +   P+++TF  L+  L    R+ EA  +F  +  +  C PNV+TY T+INGLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+ L   M     E G    PN +TYS++++GLCK G  DK   L  +M    
Sbjct: 148 KDGKLDRAIELLDLMN----ETGCC--PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+V+ Y +L++G C +   +EA  L+  M+  G  P VV+ N +M   C++ ++D A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL+ +M +    P+   YNT++ G C   +++  + L   M +  C  D  +Y+ +I+G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 308 CKNKEV------EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           CK+  V      E A  +   +   G  P   TY  +  GL   R++++AL L   M  +
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 362 DVAADTCTYRTFIDGLC 378
           +V  D  ++   I  LC
Sbjct: 382 EVVPDLSSFSMVIGSLC 398



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 14/267 (5%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N  +N L R G    A+ LF+E             PN  TY  +I GLCK G +D+A EL
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+   + P V  +  +I G C A  + +A G    +      P++++ N++++ L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 240 NGKMDNASRLLDLM---VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +G+++ A ++ + M    QC   PN  TY T+++G C  GK++R  EL   M   GC  +
Sbjct: 113 SGRVEEAFQIFESMHTSSQC--LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y++L+ G CK    ++  +L  E+  +G +P V+ YNTL +GL + R+ + AL+L  
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M  +       TY + ++  C   QV
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQV 257


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 194/397 (48%), Gaps = 29/397 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             + + G+ P++ TY+ +++ +C  G+V     I  
Sbjct: 221 VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R    P+  T+ SLI G+C + R+ EA+ +F ++   G  P+ + YNTLI+G C  G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340

Query: 131 HTIVALNLFKEM---------TNGNGEIGVVF--------------------KPNTVTYS 161
           +  +A     EM         +  N  I  +F                     P+ +TY+
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+G C+     KA  L  +M    + P   TYTSL+H     N   EA  L  ++  +
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV P+ +  N +++  C N  +  A  LL  M +  V P+  T+NT+M G C  GK+   
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +ELF  M+  G K D  S+N LI+GY +  ++++A  + NE+   G  PTV+TYN L  G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L + ++ + A +L  EM    +  D  TY T I+G+ 
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N LL    K    +    L+  +  + +   +YT++I+IN  CK G++      
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +  S   PN+VT+ +++ G C+  R+  A A+ T +K    EP+  TY +LI+G+C+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F+EM           +P+ V Y+ +IDG C +G +D A     +M  + +
Sbjct: 304 QGRLEEASKIFEEMVQKG------LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P + TY SLIH        +EA+ ++ E+ ++G+ P+ ++ N+++N  C+      A  
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P   TY +L+       ++    +LF  + S G   D   +N LI+G+C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  V+ A  L  ++    + P  VT+NT+  G     + E A +LF EM+   +  D  
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           ++ T I G   R  ++  +  R
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVR 559



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 8/380 (2%)

Query: 6   PSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           PSP P +      LG    N   +    L    + +G F     +  LI   C M +   
Sbjct: 111 PSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLG-FKSSIVFDYLIKSCCDMNRADE 169

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F  F  +      P + T  SL+      +R   A  L+ ++     + +V T+N +IN
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+ G    A +    M       GV  KPN VTY+ I+ G C  G V+ A  +   MK
Sbjct: 230 VLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+  TY SLI G C      EA  +  EMV +G++P+ V  N +++  C  G +D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            AS   D M++  + P   TYN+L+    +  + +  + +   ++  G   D  +YNILI
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NGYC+    ++A  L++E+   GIKPT  TY +L H L +  + + A  LF ++    V 
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            D   +   IDG C    V+
Sbjct: 464 PDAIMFNALIDGHCSNSNVK 483



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L+K         LFK++ S G+ PD   ++ LI+  C    V   F +
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL 488

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+ VTF ++++G C E ++ EA  LF ++K  G +P+ I++NTLI+G  R
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSR 548

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  EM +        F P  +TY+ ++ GLCK    D A+EL  +M  + +
Sbjct: 549 RGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 189 NPNVVTYTSLIHGFCHANDWNEAK 212
            P+  TY +LI G    N  +E K
Sbjct: 603 TPDDTTYFTLIEGIAKVNIPDENK 626



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 60/121 (49%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN ++    +    +    LF  +   G+ PD  +++ LI+ + + G +   F 
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L + F P V+T+ +L++GLC       A  L  ++ + G  P+  TY TLI G+ 
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 128 R 128
           +
Sbjct: 618 K 618


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 190/373 (50%), Gaps = 12/373 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PS   VS    L+  L K    +    L  ++  +G+ P+L+ Y+ +IN  CK G++   
Sbjct: 328 PSEAAVSG---LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA 384

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++F  +      PN VT+T LI G    +++  A   F K+   G    V +YN++IN 
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G   +A  LFKEM +         KP   TY+ +I G CK+G V KA +L+ +M  
Sbjct: 445 QCKFGKMKMAELLFKEMVDKG------LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PN VT+T+LI G C  N   EA  L  EMV+  + PN V+ NV++   C+ G    
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LLD M++  + P+ +TY  L+ G C TG+++  KE    +     + D+  Y  L+ 
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQ 618

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL-KLFVEMQGNDVA 364
           G+CK   ++EAL    E+  +G++  +V+Y  L  G   + Q +R L +L  EM G  + 
Sbjct: 619 GFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG--ALNQNDRILFELLREMHGKGMQ 676

Query: 365 ADTCTYRTFIDGL 377
            D   Y   IDG 
Sbjct: 677 PDNVIYTILIDGF 689



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 192/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + LL  LA+ + +  VL LF  L + G+ PD Y Y++++ C C++   +    I
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +   +  + ++VT+   I GLC   R+ EA  +   L   G + +++TY TL+ GLCR
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                V + +  EM     E+G V  P+    S +I+GL K G ++ A EL  ++    +
Sbjct: 308 IQEFEVGMEMMDEMI----ELGYV--PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGV 361

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  Y S+I+  C      EA+ L   M ++G+ PN V+  ++++   +  K+D A  
Sbjct: 362 VPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFY 421

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M++C +    ++YN++++  C  GK+   + LF  M   G K    +Y  LI+GYC
Sbjct: 422 YFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC 481

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  V +A  LY+E+  KGI P  VT+  L  GL +I +   A KLF EM    +  +  
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEV 541

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 542 TYNVLIEGHC 551



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 179/401 (44%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N+ +  L K+K     + + + L   GL  DL TY  L+   C++ +  +G  +  
Sbjct: 260 IVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMD 319

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   + P+    + LI+GL     I  A  L  K+   G  PN+  YN++IN LC+TG
Sbjct: 320 EMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG 379

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL----------------------- 167
               A  LF  M     E G+   PN VTY+I+IDG                        
Sbjct: 380 KLEEAELLFSVM----AERGL--NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 168 ------------CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
                       CK G +  A+ LF +M  + L P V TYTSLI G+C      +A  L 
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM  +G+ PN V+   ++  LC+  KM  AS+L D MV+  + PN  TYN L++G C  
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G   R  EL   M   G   D ++Y  LI G C    V EA    N+L  K  +   + Y
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L  G  +  + + AL    EM G  +  D  +Y   I G
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 180/367 (49%), Gaps = 6/367 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S F++L+    +NK     + +   +   GL P++ T S L+N   ++ +      +F  
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 215

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++ +   P+   +T ++K LC      +A  +  + +  GC  +++TYN  INGLC++  
Sbjct: 216 LVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+ + + +    GE G+  K + VTY  ++ GLC+    +   E+  +M      P+
Sbjct: 276 VWEAVEVKRSL----GEKGL--KADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPS 329

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
               + LI G         A  LL ++   GV PN+   N ++N LCK GK++ A  L  
Sbjct: 330 EAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M +  + PN  TY  L+DGF    K++     F  M   G     +SYN +IN  CK  
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFG 449

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +++ A  L+ E+  KG+KPTV TY +L  G  +     +A KL+ EM G  +A +T T+ 
Sbjct: 450 KMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFT 509

Query: 372 TFIDGLC 378
             I GLC
Sbjct: 510 ALICGLC 516



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 180/375 (48%), Gaps = 8/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+    +  +      L   +   GL PD YTY  LI   C  G+VS     
Sbjct: 538 PNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEF 597

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       + + +T+L++G C E RI EA     ++   G + ++++Y  LI+G   
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN 657

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               I+   L +EM +G G      +P+ V Y+I+IDG  K G + KA E +  M  E  
Sbjct: 658 QNDRIL-FELLREM-HGKG-----MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTYT+L++G   A   NEAK L   M+     PN ++    ++ L K G M+NA +
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+Q     N  TYN L+ G+C  GK     +L   M  +G   D  +Y+  I  YC
Sbjct: 771 LHNAMLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   V+ A+ ++  +  +G+KP  V +N L H      + +RAL+L  +M    +     
Sbjct: 830 KRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQS 889

Query: 369 TYRTFIDGLCVRPQV 383
           TY + +  L  R ++
Sbjct: 890 TYHSLMVQLAQRARL 904



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 136/261 (52%), Gaps = 7/261 (2%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNV 81
           A N++   +  L + ++  G+ PD   Y+ILI+ F K G +   F  +  ++   + PN 
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           VT+T+L+ GL     + EA  LF ++      PN ITY   ++ L + G+   AL L   
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M  G+         NTVTY+I+I G C+ G   +A +L   M    + P+ +TY++ I+ 
Sbjct: 775 MLQGSF-------ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYE 827

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +C   + + A  +   M+ +G++P+ V  N +++  C NG++D A +L + M+   ++P 
Sbjct: 828 YCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPT 887

Query: 262 AFTYNTLMDGFCLTGKINRVK 282
             TY++LM       ++ +V+
Sbjct: 888 QSTYHSLMVQLAQRARLTQVQ 908


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 195/384 (50%), Gaps = 10/384 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           +R M P P  V+ +N ++            L + + +   G + P+ YTY  +I+ +CK+
Sbjct: 137 LRQM-PRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 60  GQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G+V     +F  +L +    P  V + +LI G C + ++  A     ++   G    V T
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L++ L   G    A  L +EM  G G       P+  TY+I+I+G CKEG V KA E
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEM-GGKG-----LAPDVFTYNILINGHCKEGNVKKALE 308

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M    +   VVTYT+LI+         E   L  E V +G++P++V  N ++N   
Sbjct: 309 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 368

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +G +D A  ++  M +  + P+  TYNTLM G CL G+++  ++L   M   G + D  
Sbjct: 369 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 428

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+GY    +V++AL + NE+  KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 429 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQ 382
             N +  D  TY + I+GL    +
Sbjct: 489 VENGITPDDSTYISLIEGLTTEDE 512



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 175/369 (47%), Gaps = 12/369 (3%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     I   
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 72  IL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRT 129
           +  R   APN  T+ ++I G C   R+ EA  +F ++   G  +P  + YN LI G C  
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    AL     M     E GV       TY++++  L  +G   +A EL  +M  + L 
Sbjct: 231 GKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 284

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V TY  LI+G C   +  +A  +   M  +GV+  VV+   ++  L K G++    +L
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D  V+  +RP+   YN L++    +G I+R  E+   ME      DD +YN L+ G C 
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              V+EA  L +E+  +GI+P +VTYNTL  G       + AL++  EM          T
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 464

Query: 370 YRTFIDGLC 378
           Y   I GLC
Sbjct: 465 YNALIQGLC 473



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 184/412 (44%), Gaps = 41/412 (9%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI----------------------GL 42
           H    P S  N+LL   A  + + T L L+ R+ S+                       L
Sbjct: 42  HLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL 101

Query: 43  FPDLY---------TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F D++         T++I++   C  G+ +        +LR    PN VT+ ++I G C+
Sbjct: 102 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCS 157

Query: 94  ESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
             R+  A  +  +++  G   PN  TY T+I+G C+ G    A+ +F EM    GE+   
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV--- 213

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            KP  V Y+ +I G C +G +D A     +M    +   V TY  L+H         EA 
Sbjct: 214 -KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ EM  +G+ P+V + N+++N  CK G +  A  + + M +  VR    TY  L+   
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 332

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G++    +LF      G + D   YN LIN +  +  ++ A  +  E+  K I P  
Sbjct: 333 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 392

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           VTYNTL  GL  + + + A KL  EM    +  D  TY T I G  ++  V+
Sbjct: 393 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T T++I++  LC  G   +A EL  QM      PN VTY ++I GFC       A  ++ 
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 217 EMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCL 274
           EM ++G + PN  +   +++  CK G++D A ++ D ++ + +V+P A  YN L+ G+C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK++        M   G      +YN+L++    +    EA  L  E+  KG+ P V T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           YN L +G  +    ++AL++F  M    V A   TY   I  L  + QV+     F  A 
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 390 RKG 392
           R+G
Sbjct: 350 RRG 352


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 35/386 (9%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + P+L TY ILI   C  G++ LGF   G +++  F  + + FT
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+ GLC    +  AL L + M +
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 145 GNGE-----------IGVVFK--------------------PNTVTYSIIIDGLCKEGFV 173
             G+           I   FK                    PN VTYS II  LCK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           DKA E+   M    + PN  TY S++HG+C +    EA G L +M   GV+P+VV+ N +
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M+ LCKNG+   A ++ D M +  ++P   TY TL+ G+   G +  +  L   M   G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             + + ++ILI  Y K  +V++A+ +++++  +G+ P  VTY T+   L +  + E A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
            F +M    ++     Y + I  LC+
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCI 456



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 6/279 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S+  ++    K    D     +  +   G+ P++ TYS +I   CK   +     
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++++   PN  T+ S++ G C+  +  EA     K+ + G EP+V+TYN+L++ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  +F  MT          KP   TY  ++ G   +G + +   L   M    
Sbjct: 316 KNGRCTEARKMFDSMTKRG------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           ++PN   ++ LI  +      ++A  +  +M  QG+ P+ V+   ++  LCK+G++++A 
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           R  + M+   + P    YN+L+   C+  K ++ K+ F+
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 13/319 (4%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE---PNVITYNTLIN 124
           +F  +LR     ++      +  + A      A + + ++   G +   PN+ TY  LI 
Sbjct: 41  VFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-M 183
             C  G   +    F  + N    I   F+ + + ++ ++ GLC +     A ++ L+ M
Sbjct: 100 SCCCAGRLDLG---FAALGN---VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNG 241
                 PNV +Y  L+ G C  N   EA  LL  M D G    P+VVS   ++N   K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D A      M+   + PN  TY++++   C    +++  E+  SM   G   +  +YN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +++GYC + + +EA+    ++   G++P VVTYN+L   L +  +   A K+F  M   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 362 DVAADTCTYRTFIDGLCVR 380
            +  +  TY T + G   +
Sbjct: 334 GLKPEITTYGTLLQGYATK 352



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH     P V ++N L+  L KN        +F  +   GL P++ TY  L+  +  
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G +     +   ++R+   PN   F+ LI     + ++ +A  +F+K++  G  P+ +T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y T+I  LC++G    A+  F++M +          P  + Y+ +I  LC     DKAK+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGNIVYNSLIHSLCIFDKWDKAKD 465

Query: 179 LFLQMKYENLNPNVVTYTSLIH 200
            FL+   E     V T  SLI 
Sbjct: 466 YFLKCWIEAF---VWTLFSLIQ 484


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 203/377 (53%), Gaps = 17/377 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS----IGLFPDLYTYSILINCFCKMGQVSL 64
           P    +  L+  L K+   +   +L+K  N+        PD+ TY+ LI+  CK G++  
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204

Query: 65  GFVIFG-RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +F    +   F P+ VT+TS+I GLC   R+ E    F +++  G EP+ +TY  LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  +      A  ++++M      +      +TVTY+II+DGLCK G V +A   FL M
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVV------STVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           +       VVTY++L+ GFC   + + A  L   M+D+G +PN+VS N+I+  LC+ GK+
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK---ELFVSMESMGCKHDDFSY 300
             A    + ++Q  + P+ +T+N  + G C   +++ V    ELF SM S G   +  SY
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRLDTVSDGVELFESMVSQGTSPNLHSY 436

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +IL++G C+   +E AL ++ E+  +G+ P VV +NTL   L    + + AL++F E++ 
Sbjct: 437 SILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER 496

Query: 361 NDVAADTCTYRTFIDGL 377
              A D  +Y + +DGL
Sbjct: 497 RS-APDAWSYWSLLDGL 512



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 193/375 (51%), Gaps = 10/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K    D  +++ +++   G  P L TY+++I+   K G+V     I
Sbjct: 75  PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA----FGCEPNVITYNTLIN 124
           F  +L +   P+   +T+LIKGLC   +  EA AL+ +  A        P+V+TY +LI+
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G  + A  +F +     G     F P+ VTY+ IIDGLCK G V++  E F +M+
Sbjct: 195 GLCKAGRILEARQVFDDEAVERG-----FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+ VTY +LI GF  A    +A  +  +M+  G   + V+ N+I++ LCK G++ 
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M +        TY+ LMDGFC  G ++   ELF  M   GC+ +  SYNI+I
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 369

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE-IRQAERALKLFVEMQGNDV 363
            G C+  ++ +A   + +L  + + P V T+N   HGL + +      ++LF  M     
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGT 429

Query: 364 AADTCTYRTFIDGLC 378
           + +  +Y   +DG+C
Sbjct: 430 SPNLHSYSILMDGIC 444



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 3/373 (0%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+ +  L K +  D    L K+++     P   TY+ L++   K G++     +
Sbjct: 40  PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV 99

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++    +P + T+T +I GL    R+ EA  +F  +   GC P+   Y  LI GLC+
Sbjct: 100 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCK 159

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN- 187
           +G    A  L+KE          V  P+ VTY+ +IDGLCK G + +A+++F     E  
Sbjct: 160 SGKPEEAYALYKEANARKHHATAV--PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG 217

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ VTYTS+I G C      E      EM ++G +P+ V+   +++   K   +  A 
Sbjct: 218 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 277

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+   M+Q     +  TYN ++DG C  G++      F++ME  GC     +Y+ L++G+
Sbjct: 278 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 337

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    V  A+ L+  +  +G +P +V+YN +  GL    +  +A   F ++    +  D 
Sbjct: 338 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDV 397

Query: 368 CTYRTFIDGLCVR 380
            T+  F+ GLC R
Sbjct: 398 YTFNAFLHGLCQR 410



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 162/319 (50%), Gaps = 17/319 (5%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           +P++V FT +I GLC E R+ EA ++  +    GCEP+ +TYN  I+GLC+      A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L K+M            P TVTY+ ++DGL K G +D+A  +  QM  +  +P + TYT 
Sbjct: 64  LLKKMDEKK------CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I G   A    EA+ + ++M+  G +P+      ++  LCK+GK + A  L     + +
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK---EAN 174

Query: 258 VR-------PNAFTYNTLMDGFCLTGKINRVKELFVSME-SMGCKHDDFSYNILINGYCK 309
            R       P+  TY +L+DG C  G+I   +++F       G   D  +Y  +I+G CK
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              VEE    ++E+  +G +P  VTY  L  G  + +   +A +++ +M  +     T T
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 370 YRTFIDGLCVRPQVRFTYA 388
           Y   +DGLC   +V   YA
Sbjct: 295 YNIILDGLCKAGRVAEAYA 313



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 165/323 (51%), Gaps = 8/323 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++  L K    +     F  + + G  PD  TY+ LI+ F K   +     +
Sbjct: 220 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++L+S    + VT+  ++ GLC   R+ EA A F  ++  GC   V+TY+ L++G C 
Sbjct: 280 YRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCS 339

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF+ M +   E      PN V+Y+III GLC+ G + KA   F ++    L
Sbjct: 340 EGNVSAAVELFRRMLDRGCE------PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393

Query: 189 NPNVVTYTSLIHGFCHANDW-NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+V T+ + +HG C   D  ++   L   MV QG  PN+ S +++M+ +C+ G ++ A 
Sbjct: 394 CPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   MV   V P+   +NTL+   C+ G+++   E+F  +E      D +SY  L++G 
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGL 512

Query: 308 CKNKEVEEALSLYNELPFKGIKP 330
            + + +EEA  L   +  +G  P
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAP 535



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 138/273 (50%), Gaps = 15/273 (5%)

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
           C P+++ +  +INGLCR      A ++ +       E      P+ VTY++ IDGLCK  
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCE------PDYVTYNVFIDGLCKAE 56

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            VD A +L  +M  +   P  VTYT+L+ G   A   +EA  +L +MV++G  P + +  
Sbjct: 57  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYT 116

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           V+++ L K G+++ A R+   M+    RP+AF Y  L+ G C +GK      L+   E+ 
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY--KEAN 174

Query: 292 GCKH------DDFSYNILINGYCKNKEVEEALSLY-NELPFKGIKPTVVTYNTLFHGLFE 344
             KH      D  +Y  LI+G CK   + EA  ++ +E   +G  P  VTY ++  GL +
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + + E   + F EM+      D  TY   IDG 
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 267



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 16/301 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K K       +++++   G      TY+I+++  CK G+V+  +  
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  +  R C A  VVT+++L+ G C+E  +  A  LF ++   GCEPN+++YN +I GLC
Sbjct: 315 FLAMEERGCVA-TVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 373

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQMKYE 186
           R G    A   F+++            P+  T++  + GLC+    V    ELF  M  +
Sbjct: 374 RAGKLAKAYFYFEKLLQRR------LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN+ +Y+ L+ G C A     A  +  EMV +GV P+VV  N ++  LC  G++D A
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 247 SRLLDLMVQCDVR--PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--KHDDFSYNI 302
              L++  + + R  P+A++Y +L+DG     ++   + L   M+  GC  +H D +   
Sbjct: 488 ---LEVFRELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHYDLTVRF 544

Query: 303 L 303
           L
Sbjct: 545 L 545



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 125/248 (50%), Gaps = 10/248 (4%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ V ++++I+GLC+E  +D+A  +  +       P+ VTY   I G C A   ++A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +M ++   P  V+   +++ L K G++D A  +L+ MV+    P   TY  ++DG   
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG----IKP 330
            G++   + +FV M   GC+ D F Y  LI G CK+ + EEA +LY E   +       P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 331 TVVTYNTLFHGLFEIRQAERALKLF-VEMQGNDVAADTCTYRTFIDGLCVRPQV-----R 384
            VVTY +L  GL +  +   A ++F  E        D  TY + IDGLC   +V     R
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 385 FTYARRKG 392
           F   R +G
Sbjct: 245 FHEMRNRG 252



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%)

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           M C  D  ++ ++ING C+ K ++EA S+       G +P  VTYN    GL +  + + 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGL 377
           A +L  +M        T TY   +DGL
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGL 87


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 187/367 (50%), Gaps = 7/367 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            S + IL+ CL K  ++D    L   +           YS +IN  CK+ +V     +  
Sbjct: 45  ASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIE 104

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++ R    P+ +T+  +++ LC   RI +A A   ++   G +P+   YN +++GLC+  
Sbjct: 105 KMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEE 163

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF++M            PN VTY+ +I+GLCK   ++ A ELF +M  +   P
Sbjct: 164 KVEEARLLFEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
             V+Y +LI GFC   D   AK +  +MV     PNVV+   +++ L K+GK+  A+ +L
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL 277

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D MV+  V PN  TY+ L+DGFC   +++   +L   M + G      +YNIL+N  C+ 
Sbjct: 278 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 337

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++E+A  L+  +  +   PTVVTYNTL   L   +Q + A +L+ EM       D  TY
Sbjct: 338 DKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397

Query: 371 RTFIDGL 377
            T   GL
Sbjct: 398 DTLAWGL 404



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 186/375 (49%), Gaps = 7/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN +    AK    + V  +++ +   G       Y ILI+C CK+G     + +
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F    + ++++I  LC  +R+ EA  L  K+  +   P+ +TY  ++  LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     AL   +EM           KP+   Y+ ++ GLC+E  V++A+ LF +M  + +
Sbjct: 127 TKRIDDALATVEEMATRG------IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPNVVTY +LI+G C A     A  L  EM  +G  P  VS N +++  CK   +  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV+ +  PN  TY TL+DG   +GK+    E+   M   G   +  +Y+ LI+G+C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + V+EA  L  ++  +GI PTVVTYN L + L    + E A KLF  M          
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 369 TYRTFIDGLCVRPQV 383
           TY T +  LC   Q+
Sbjct: 361 TYNTLLRALCHHKQL 375



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 6/324 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP   ++  ++  L K K  D  L+  + + + G+ PD + Y+ +++  C+  +V    
Sbjct: 110 APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 169

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++F ++++    PNVVT+ +LI GLC   RI  A  LF ++   G  P  ++YNTLI+G 
Sbjct: 170 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+    + A ++F +M   N        PN VTY+ +IDGL K G V  A E+   M  +
Sbjct: 230 CKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNV TY+ LI GFC     +EA  LL +MV QG+ P VV+ N+++N LC+  K+++A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L   M Q    P   TYNTL+   C   +++    L+  M + GC  D  +Y+ L  G
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 403

Query: 307 YCKNKEVEEALSLYNELPFKGIKP 330
             +  +V EA  L  ++      P
Sbjct: 404 LTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 163/316 (51%), Gaps = 6/316 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD  TY  ++   CK  ++         +      P+   +  ++ GLC E ++ EA  L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F K+      PNV+TYNTLINGLC+      A  LFKEM  G G     + P  V+Y+ +
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMA-GKG-----YVPTEVSYNTL 225

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG CK+  +  AK++F +M   N  PNVVTYT+LI G   +     A  +L  MV +GV
Sbjct: 226 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNV + + +++  CK  ++D A +LL+ MV   + P   TYN L++  C   K+    +
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 345

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           LF  M    C     +YN L+   C +K+++ A  LY E+  KG  P  +TY+TL  GL 
Sbjct: 346 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 405

Query: 344 EIRQAERALKLFVEMQ 359
              +   A +L  +M+
Sbjct: 406 RAGKVHEAQELMEKMK 421



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 5/216 (2%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M    + P   T+ ++  GF  A    + K +   MV+ G         ++++ LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSY 300
            D A +LL  M     +  A  Y+T+++  C   K+NRV+E    +E M      D  +Y
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLC---KLNRVEEARELIEKMARYAPPDALTY 117

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             ++   CK K +++AL+   E+  +GIKP    YN +  GL +  + E A  LF +M  
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
             +  +  TY T I+GLC   ++   Y   K  +G 
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK 213


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 195/378 (51%), Gaps = 15/378 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V+  N ++  L K   +   L  FK +      PD+ T++IL++   K G+V   F 
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 68  IFGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           IF  +  S  C  PNVVT+T++I GLC + ++  A  L   +   GC PNVITY+ L+ G
Sbjct: 122 IFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G T     L +EMT         F+P+ + Y+ +++GLCK   +D+A EL   M  
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRG------FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P VVTY SL+  FC +   + A  L+  M ++G  P+V++ N ++  LC++ ++D+
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFC------LTGKINRVKELFVSMESMGCKHDDFS 299
           A  LL  MV     P+  TY+T++DG C         K+    E+   M+  GC  +  +
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y ++I G C+ ++ ++AL+L   +    + P + +++ +   L +    + A K+F  M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 360 GNDVAADTCTYRTFIDGL 377
             +   +   Y   IDGL
Sbjct: 415 ERECKPNPVAYAALIDGL 432



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 14/371 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N  L  L +   +   + LF+    +   P+ +TY  LI+  CK G++   + +   + 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P V     +I+GLC   R  +A   F  +    C P++IT+N L++ L ++G   
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +F+ M   +  +     PN VTY+ +I+GLCK+G +D+A EL   M      PNV+
Sbjct: 118 EAFQIFESMHTSSQCL-----PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY+ L+ G C A   ++   LL EM  +G QP+V+  N ++N LCK+ ++D A  L+ LM
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++    P   TYN+LM+ FC + +++R   L   M   GC  D  +YN +I G C++  +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA------ERALKLFVEMQGNDVAADT 367
           ++A +L  ++      P V+TY+T+  GL +  +       E A ++   M+      + 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 368 CTYRTFIDGLC 378
            TY   I+GLC
Sbjct: 353 GTYAVVIEGLC 363



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 16/384 (4%)

Query: 4   MHPSP---PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MH S    P V ++  ++  L K+   D  + L   +N  G  P++ TYS+L+   CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +   GF +   + R  F P+V+ + +L+ GLC   R+ EA  L   +   GC P V+TYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +L+   CR+     A  L + M+    E G    P+ + Y+ +I GLC++  +D A+ L 
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMS----ERGC--PPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 181 LQMKYENLNPNVVTYTSLIHGFCH----ANDWN-EAKGLLIEMVDQ-GVQPNVVSSNVIM 234
            QM      P+V+TY+++I G C       DW  EA   ++EM+ Q G  PN  +  V++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC+  K   A  LL  M+  +V P+  +++ ++   C +  ++   ++F  M    CK
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +Y  LI+G  K  EV++A+ ++ EL  +  +P V TYN++  GL  + + E A+++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M   +   D  +Y   I GLC
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLC 502



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 13/377 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K    D    L   +   G+ P +  ++ +I   CK G+       
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLC 127
           F  +  +   P+++TF  L+  L    R+ EA  +F  +  +  C PNV+TY T+INGLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+ L   M     E G    PN +TYS++++GLCK G  DK   L  +M    
Sbjct: 148 KDGKLDRAIELLDLMN----ETGCC--PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+V+ Y +L++G C +   +EA  L+  M+  G  P VV+ N +M   C++ ++D A 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL+ +M +    P+   YNT++ G C   +++  + L   M +  C  D  +Y+ +I+G 
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 308 CKNKEV------EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           CK+  V      E A  +   +   G  P   TY  +  GL   R++++AL L   M  +
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 362 DVAADTCTYRTFIDGLC 378
           +V  D  ++   I  LC
Sbjct: 382 EVVPDLSSFSMVIGSLC 398



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 14/267 (5%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N  +N L R G    A+ LF+E             PN  TY  +I GLCK G +D+A EL
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+   + P V  +  +I G C A  + +A G    +      P++++ N++++ L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 240 NGKMDNASRLLDLM---VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +G+++ A ++ + M    QC   PN  TY T+++G C  GK++R  EL   M   GC  +
Sbjct: 113 SGRVEEAFQIFESMHTSSQC--LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y++L+ G CK    ++  +L  E+  +G +P V+ YNTL +GL + R+ + AL+L  
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
            M  +       TY + ++  C   QV
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQV 257


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 196/369 (53%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + K+  +   + +   + + G  P++ TY+++IN  C+ G+V      
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P+ V++T+++KGLCA  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+ G+G        NT   +I+I+ +CK+G VD A +    M     
Sbjct: 329 GGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 382

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ ++YT+++ G C A  W +AK LL EMV +   PN V+ N  +  LC+ G ++ A+ 
Sbjct: 383 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 442

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M +     N  TYN L++GFC+ G+++   ELF SM    CK +  +Y  L+ G C
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLC 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + ++ A  L  E+  K   P VVT+N L     +    + A++L  +M  +    +  
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559

Query: 369 TYRTFIDGL 377
           TY T +DG+
Sbjct: 560 TYNTLLDGI 568



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 12/368 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+    +    D    L   + S+ + PD YTY+ +I   C  G+V     +  
Sbjct: 144 VFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLD 200

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P+VVT+T L++ +C  +   +A  +  +++A GC PN++TYN +ING+CR G
Sbjct: 201 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A    +E  N     G  F+P+TV+Y+ ++ GLC     +  +ELF +M  +N  P
Sbjct: 261 RVDDA----REFLNRLSSYG--FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 314

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VT+  L+  FC       A  +L +M   G   N    N+++N +CK G++D+A + L
Sbjct: 315 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M      P+  +Y T++ G C   +    KEL   M    C  ++ ++N  I   C+ 
Sbjct: 375 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 434

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A  L  ++   G +  +VTYN L +G     + + AL+LF  M       +T TY
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITY 491

Query: 371 RTFIDGLC 378
            T + GLC
Sbjct: 492 TTLLTGLC 499



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F++L+    +    +  + + ++++  G   +    +I+IN  CK G+V   F  
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 373

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+ +++T+++KGLC   R  +A  L  ++    C PN +T+NT I  LC+
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++M+    E+      N VTY+ +++G C +G VD A ELF  M     
Sbjct: 434 KGLIEQATMLIEQMSEHGCEV------NIVTYNALVNGFCVQGRVDSALELFYSMP---C 484

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TYT+L+ G C+A   + A  LL EM+ +   PNVV+ NV+++  C+ G MD A  
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M++    PN  TYNTL+DG           EL   + S G   D  +Y+ +I    
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   VEEA+ +++ +   G++P  V YN +   L +    + A+  F  M  N    +  
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 369 TYRTFIDGL 377
           TY T I+GL
Sbjct: 665 TYITLIEGL 673



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 176/343 (51%), Gaps = 9/343 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D++ Y+ L+  +C+ GQ+     +   +     AP+  T+T +I+GLC   R+ EA
Sbjct: 139 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 195

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            +L   +   GC+P+V+TY  L+  +C++     A+ +  EM            PN VTY
Sbjct: 196 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 249

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           ++II+G+C+EG VD A+E   ++      P+ V+YT+++ G C A  W + + L  EM++
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +   PN V+ ++++   C+ G ++ A ++L+ M       N    N +++  C  G+++ 
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +   +M S GC  D  SY  ++ G C+ +  E+A  L  E+  K   P  VT+NT   
Sbjct: 370 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L +    E+A  L  +M  +    +  TY   ++G CV+ +V
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  +L  L   K ++ V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 279 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     A N      +I  +C + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L KEM   N        PN VT++  I  LC++G +++A  L  QM     
Sbjct: 399 AERWEDAKELLKEMVRKN------CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY +L++GFC     + A  L   M     +PN ++   ++  LC   ++D A+ 
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAE 509

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+Q D  PN  T+N L+  FC  G ++   EL   M   GC  +  +YN L++G  
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+   EEAL L + L   G+ P +VTY+++   L    + E A+K+F  +Q   +     
Sbjct: 570 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 629

Query: 369 TYRTFIDGLCVR 380
            Y   +  LC R
Sbjct: 630 IYNKILLALCKR 641



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 9/301 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR G    A  
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ II GLC  G V +A  L   M +    P+VVTYT 
Sbjct: 166 LIASMP---------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 216

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C +  + +A  +L EM  +G  PN+V+ NVI+N +C+ G++D+A   L+ +    
Sbjct: 217 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 276

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+  +Y T++ G C   +   V+ELF  M    C  ++ ++++L+  +C+   VE A+
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 336

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++   G        N + + + +  + + A +    M     + DT +Y T + GL
Sbjct: 337 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396

Query: 378 C 378
           C
Sbjct: 397 C 397



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 26/340 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D        + S G  PD  +Y+ ++   C+  +      +   ++R
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN VTF + I  LC +  I +A  L  ++   GCE N++TYN L+NG C  G    
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474

Query: 135 ALNLFKEMT---------------------NGNGEIGVVF-----KPNTVTYSIIIDGLC 168
           AL LF  M                      +   E+          PN VT+++++   C
Sbjct: 475 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G +D+A EL  QM      PN++TY +L+ G     +  EA  LL  +V  GV P++V
Sbjct: 535 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIV 594

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + I+  L +  +++ A ++  ++    +RP A  YN ++   C     +   + F  M
Sbjct: 595 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 654

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            S GC  ++ +Y  LI G      ++E   L  EL  +G+
Sbjct: 655 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 9/284 (3%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           AA L  +  + G  P+V     LI  LCR G T  A  + +        + V        
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDV------FA 146

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++ G C+ G +D A+ L   M    + P+  TYT +I G C      EA  LL +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G QP+VV+  V++  +CK+     A  +LD M      PN  TYN +++G C  G+++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +E    + S G + D  SY  ++ G C  K  E+   L+ E+  K   P  VT++ L 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                    ERA+++  +M G+  AA+T      I+ +C + +V
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +      P++ T+++L++ FC+ G +   
Sbjct: 483 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++T+ +L+ G+  +    EA  L   L + G  P+++TY+++I  
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R      A+ +F  + +      +  +P  V Y+ I+  LCK    D A + F  M  
Sbjct: 603 LSREDRVEEAIKMFHIVQD------LGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 656

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
               PN +TY +LI G  + +   E + LL E+  +GV
Sbjct: 657 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++N LL  + K+ + +  L L   L S G+ PD+ TYS +I    +  +V  
Sbjct: 552 HGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEE 611

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      P  V +  ++  LC       A   F  + + GC PN +TY TLI 
Sbjct: 612 AIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 671

Query: 125 GLCRTGHTIVALNLFKEM 142
           GL          +L +E+
Sbjct: 672 GLANEDFLKETRDLLREL 689



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 38/104 (36%), Gaps = 3/104 (2%)

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R   L     S G   D +    LI   C+     +A  +       G    V  YNTL 
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            G     Q + A +L   M    VA D  TY   I GLC R +V
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRV 192


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 184/378 (48%), Gaps = 19/378 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P P  S N LL  L+K    D     FK + + G+   ++TY+I+I+  CK G
Sbjct: 12  MRKFRVFPKP-RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 70

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            + +   +F ++  + F P++VT+ SLI G      + E   +F ++K   C+P+VITYN
Sbjct: 71  DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 130

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LIN  C+      A     EM   NG      KPN VTYS  ID  CKEG + +A + F
Sbjct: 131 ALINCFCKFERMPKAFEFLHEM-KANG-----LKPNVVTYSTFIDAFCKEGMLQEAIKFF 184

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           + M+   L PN  TYTSLI   C A +  EA  L+ E++  G++ NVV+   +++ LC+ 
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+M  A  +   M+   V PN  TY  L+ GF    ++   K++   M+    K D   Y
Sbjct: 245 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 304

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             ++ G C    +EEA  L  E+   GI    V Y TL    F+  QA  AL L  EM  
Sbjct: 305 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM-- 362

Query: 361 NDVAADTCTYRTFIDGLC 378
                        +DGLC
Sbjct: 363 ----------LDLVDGLC 370



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 29/389 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K    D  + +F+++      PD+ TY+ LINCFCK  ++   F  
Sbjct: 89  PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 148

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNVVT+++ I   C E  + EA   F  ++     PN  TY +LI+  C+
Sbjct: 149 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL L +E+           K N VTY+ ++DGLC+EG + +A+E+F  M    +
Sbjct: 209 AGNLAEALKLVEEILQAG------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+L+HGF  A +   AK +L EM ++ ++P+++    I+  LC   +++ A  
Sbjct: 263 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 322

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV-----------------------KELF 285
           L+  + +  +  NA  Y TLMD +  +G+                           K+LF
Sbjct: 323 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLF 382

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G   D  +Y  LI+G  K+  ++EAL+L + +   G++  +  Y  L  GL   
Sbjct: 383 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 442

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFI 374
            Q ++A  L  EM G  V  D   Y   I
Sbjct: 443 GQVQKARNLLDEMIGKGVLPDEVVYMCLI 471



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 6/288 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA+  F K++ F   P   + N L++ L + G   ++   FK+M    G  G+  K +  
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 57

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+I+ID LCKEG ++ A+ LF QMK     P++VTY SLI G       +E   +  +M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            D    P+V++ N ++N  CK  +M  A   L  M    ++PN  TY+T +D FC  G +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               + FV M  +    ++F+Y  LI+  CK   + EAL L  E+   GIK  VVTY  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
             GL E  + + A ++F  M    VA +  TY   + G     ++ + 
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 285



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 161/343 (46%), Gaps = 29/343 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++  +    K       +  F  +  + L P+ +TY+ LI+  CK G ++    +
Sbjct: 159 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 218

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              IL++    NVVT+T+L+ GLC E R+ EA  +F  +   G  PN  TY  L++G  +
Sbjct: 219 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 278

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ KEM           KP+ + Y  I+ GLC E  +++AK L  ++K   +
Sbjct: 279 AKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 332

Query: 189 NPNVVTYTSL-----------------------IHGFCHANDWNEAKGLLIEMVDQGVQP 225
           N N V YT+L                       + G C  N +  AK L  EM+D+G+ P
Sbjct: 333 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMP 392

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           + ++   +++   K+G +  A  L D M++  +  +   Y  L+ G   +G++ + + L 
Sbjct: 393 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 452

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             M   G   D+  Y  LI  Y    +V+EAL L NE+  +G+
Sbjct: 453 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 106/207 (51%)

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +++A E FL+M+   + P   +  +L+H        + ++    +M   G++ +V + N
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           ++++ LCK G ++ A  L   M +    P+  TYN+L+DG    G ++    +F  M+  
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
            C  D  +YN LIN +CK + + +A    +E+   G+KP VVTY+T      +    + A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +K FV+M+   +  +  TY + ID  C
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANC 207


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 196/369 (53%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + K+  +   + +   + + G  P++ TY+++IN  C+ G+V      
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P+ V++T+++KGLCA  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+ G+G        NT   +I+I+ +CK+G VD A +    M     
Sbjct: 298 GGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ ++YT+++ G C A  W +AK LL EMV +   PN V+ N  +  LC+ G ++ A+ 
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M +     N  TYN L++GFC+ G+++   ELF SM    CK +  +Y  L+ G C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLC 468

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + ++ A  L  E+  K   P VVT+N L     +    + A++L  +M  +    +  
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 369 TYRTFIDGL 377
           TY T +DG+
Sbjct: 529 TYNTLLDGI 537



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 12/368 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+    +    D    L   + S+ + PD YTY+ +I   C  G+V     +  
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P+VVT+T L++ +C  +   +A  +  +++A GC PN++TYN +ING+CR G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A    +E  N     G  F+P+TV+Y+ ++ GLC     +  +ELF +M  +N  P
Sbjct: 230 RVDDA----REFLNRLSSYG--FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VT+  L+  FC       A  +L +M   G   N    N+++N +CK G++D+A + L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M      P+  +Y T++ G C   +    KEL   M    C  ++ ++N  I   C+ 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A  L  ++   G +  +VTYN L +G     + + AL+LF  M       +T TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITY 460

Query: 371 RTFIDGLC 378
            T + GLC
Sbjct: 461 TTLLTGLC 468



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F++L+    +    +  + + ++++  G   +    +I+IN  CK G+V   F  
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+ +++T+++KGLC   R  +A  L  ++    C PN +T+NT I  LC+
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++M+    E+      N VTY+ +++G C +G VD A ELF  M     
Sbjct: 403 KGLIEQATMLIEQMSEHGCEV------NIVTYNALVNGFCVQGRVDSALELFYSMP---C 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TYT+L+ G C+A   + A  LL EM+ +   PNVV+ NV+++  C+ G MD A  
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M++    PN  TYNTL+DG           EL   + S G   D  +Y+ +I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   VEEA+ +++ +   G++P  V YN +   L +    + A+  F  M  N    +  
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 369 TYRTFIDGL 377
           TY T I+GL
Sbjct: 634 TYITLIEGL 642



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 176/343 (51%), Gaps = 9/343 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D++ Y+ L+  +C+ GQ+     +   +     AP+  T+T +I+GLC   R+ EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            +L   +   GC+P+V+TY  L+  +C++     A+ +  EM            PN VTY
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 218

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           ++II+G+C+EG VD A+E   ++      P+ V+YT+++ G C A  W + + L  EM++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +   PN V+ ++++   C+ G ++ A ++L+ M       N    N +++  C  G+++ 
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +   +M S GC  D  SY  ++ G C+ +  E+A  L  E+  K   P  VT+NT   
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L +    E+A  L  +M  +    +  TY   ++G CV+ +V
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  +L  L   K ++ V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     A N      +I  +C + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L KEM   N        PN VT++  I  LC++G +++A  L  QM     
Sbjct: 368 AERWEDAKELLKEMVRKN------CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY +L++GFC     + A  L   M     +PN ++   ++  LC   ++D A+ 
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAE 478

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+Q D  PN  T+N L+  FC  G ++   EL   M   GC  +  +YN L++G  
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +   EEAL L + L   G+ P +VTY+++   L    + E A+K+F  +Q   +     
Sbjct: 539 NDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598

Query: 369 TYRTFIDGLCVR 380
            Y   +  LC R
Sbjct: 599 IYNKILLALCKR 610



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 9/301 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR G    A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ II GLC  G V +A  L   M +    P+VVTYT 
Sbjct: 135 LIASMP---------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C +  + +A  +L EM  +G  PN+V+ NVI+N +C+ G++D+A   L+ +    
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+  +Y T++ G C   +   V+ELF  M    C  ++ ++++L+  +C+   VE A+
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++   G        N + + + +  + + A +    M     + DT +Y T + GL
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 378 C 378
           C
Sbjct: 366 C 366



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 154/340 (45%), Gaps = 26/340 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D        + S G  PD  +Y+ ++   C+  +      +   ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN VTF + I  LC +  I +A  L  ++   GCE N++TYN L+NG C  G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 135 ALNLFKEMT---------------------NGNGEIGVVF-----KPNTVTYSIIIDGLC 168
           AL LF  M                      +   E+          PN VT+++++   C
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G +D+A EL  QM      PN++TY +L+ G  +  +  EA  LL  +V  GV P++V
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIV 563

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + I+  L +  +++ A ++  ++    +RP A  YN ++   C     +   + F  M
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            S GC  ++ +Y  LI G      ++E   L  EL  +G+
Sbjct: 624 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 9/296 (3%)

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           ++ L A   + EAA L  +  + G  P+V     LI  LCR G T  A  + +       
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            + V        Y+ ++ G C+ G +D A+ L   M    + P+  TYT +I G C    
Sbjct: 110 AVDV------FAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             EA  LL +M+ +G QP+VV+  V++  +CK+     A  +LD M      PN  TYN 
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +++G C  G+++  +E    + S G + D  SY  ++ G C  K  E+   L+ E+  K 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P  VT++ L          ERA+++  +M G+  AA+T      I+ +C + +V
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +      P++ T+++L++ FC+ G +   
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++T+ +L+ G+  +    EA  L   L + G  P+++TY+++I  
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R      A+ +F  + +      +  +P  V Y+ I+  LCK    D A + F  M  
Sbjct: 572 LSREDRVEEAIKMFHIVQD------LGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
               PN +TY +LI G  + +   E + LL E+  +GV
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
           +N  +  L     +  A+RL+D        P+ +    L+   C  G+ +    +  + E
Sbjct: 46  ANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105

Query: 290 SMGCKHDDFSYNILINGYCKNKEVE--------------------------------EAL 317
             G   D F+YN L+ GYC+  +++                                EAL
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEAL 165

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           SL +++  +G +P+VVTY  L   + +     +A+++  EM+      +  TY   I+G+
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225

Query: 378 CVRPQV 383
           C   +V
Sbjct: 226 CREGRV 231



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++N LL  +  + + +  L L   L S G+ PD+ TYS +I    +  +V  
Sbjct: 521 HGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEE 580

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      P  V +  ++  LC       A   F  + + GC PN +TY TLI 
Sbjct: 581 AIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640

Query: 125 GLCRTGHTIVALNLFKEM 142
           GL          +L +E+
Sbjct: 641 GLANEDFLKETRDLLREL 658


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 196/369 (53%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + K+  +   + +   + + G  P++ TY+++IN  C+ G+V      
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P+ V++T+++KGLCA  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ + ++M+ G+G        NT   +I+I+ +CK+G VD A +    M     
Sbjct: 298 GGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ ++YT+++ G C A  W +AK LL EMV +   PN V+ N  +  LC+ G ++ A+ 
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M +     N  TYN L++GFC+ G+++   ELF SM    CK +  +Y  L+ G C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLC 468

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             + ++ A  L  E+  K   P VVT+N L     +    + A++L  +M  +    +  
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 369 TYRTFIDGL 377
           TY T +DG+
Sbjct: 529 TYNTLLDGI 537



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 12/368 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+    +    D    L   + S+ + PD YTY+ +I   C  G+V     +  
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L     P+VVT+T L++ +C  +   +A  +  +++A GC PN++TYN +ING+CR G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A    +E  N     G  F+P+TV+Y+ ++ GLC     +  +ELF +M  +N  P
Sbjct: 230 RVDDA----REFLNRLSSYG--FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VT+  L+  FC       A  +L +M   G   N    N+++N +CK G++D+A + L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M      P+  +Y T++ G C   +    KEL   M    C  ++ ++N  I   C+ 
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A  L  ++   G +  +VTYN L +G     + + AL+LF  M       +T TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITY 460

Query: 371 RTFIDGLC 378
            T + GLC
Sbjct: 461 TTLLTGLC 468



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F++L+    +    +  + + ++++  G   +    +I+IN  CK G+V   F  
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+ +++T+++KGLC   R  +A  L  ++    C PN +T+NT I  LC+
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++M+    E+      N VTY+ +++G C +G VD A ELF  M     
Sbjct: 403 KGLIEQATMLIEQMSEHGCEV------NIVTYNALVNGFCVQGRVDSALELFYSMP---C 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TYT+L+ G C+A   + A  LL EM+ +   PNVV+ NV+++  C+ G MD A  
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M++    PN  TYNTL+DG           EL   + S G   D  +Y+ +I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   VEEA+ +++ +   G++P  V YN +   L +    + A+  F  M  N    +  
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 369 TYRTFIDGL 377
           TY T I+GL
Sbjct: 634 TYITLIEGL 642



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 176/343 (51%), Gaps = 9/343 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D++ Y+ L+  +C+ GQ+     +   +     AP+  T+T +I+GLC   R+ EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            +L   +   GC+P+V+TY  L+  +C++     A+ +  EM            PN VTY
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 218

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           ++II+G+C+EG VD A+E   ++      P+ V+YT+++ G C A  W + + L  EM++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +   PN V+ ++++   C+ G ++ A ++L+ M       N    N +++  C  G+++ 
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +   +M S GC  D  SY  ++ G C+ +  E+A  L  E+  K   P  VT+NT   
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L +    E+A  L  +M  +    +  TY   ++G CV+ +V
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  +L  L   K ++ V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     A N      +I  +C + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L KEM   N        PN VT++  I  LC++G +++A  L  QM     
Sbjct: 368 AERWEDAKELLKEMVRKN------CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY +L++GFC     + A  L   M     +PN ++   ++  LC   ++D A+ 
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAE 478

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+Q D  PN  T+N L+  FC  G ++   EL   M   GC  +  +YN L++G  
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+   EEAL L + L   G+ P +VTY+++   L    + E A+K+F  +Q   +     
Sbjct: 539 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598

Query: 369 TYRTFIDGLCVR 380
            Y   +  LC R
Sbjct: 599 IYNKILLALCKR 610



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 9/301 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR G    A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ II GLC  G V +A  L   M +    P+VVTYT 
Sbjct: 135 LIASMP---------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C +  + +A  +L EM  +G  PN+V+ NVI+N +C+ G++D+A   L+ +    
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+  +Y T++ G C   +   V+ELF  M    C  ++ ++++L+  +C+   VE A+
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++   G        N + + + +  + + A +    M     + DT +Y T + GL
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 378 C 378
           C
Sbjct: 366 C 366



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 26/340 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D        + S G  PD  +Y+ ++   C+  +      +   ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN VTF + I  LC +  I +A  L  ++   GCE N++TYN L+NG C  G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 135 ALNLFKEMT---------------------NGNGEIGVVF-----KPNTVTYSIIIDGLC 168
           AL LF  M                      +   E+          PN VT+++++   C
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G +D+A EL  QM      PN++TY +L+ G     +  EA  LL  +V  GV P++V
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIV 563

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + I+  L +  +++ A ++  ++    +RP A  YN ++   C     +   + F  M
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            S GC  ++ +Y  LI G      ++E   L  EL  +G+
Sbjct: 624 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 9/296 (3%)

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           ++ L A   + EAA L  +  + G  P+V     LI  LCR G T  A  + +       
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            + V        Y+ ++ G C+ G +D A+ L   M    + P+  TYT +I G C    
Sbjct: 110 AVDV------FAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             EA  LL +M+ +G QP+VV+  V++  +CK+     A  +LD M      PN  TYN 
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +++G C  G+++  +E    + S G + D  SY  ++ G C  K  E+   L+ E+  K 
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P  VT++ L          ERA+++  +M G+  AA+T      I+ +C + +V
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +      P++ T+++L++ FC+ G +   
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++T+ +L+ G+  +    EA  L   L + G  P+++TY+++I  
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R      A+ +F  + +      +  +P  V Y+ I+  LCK    D A + F  M  
Sbjct: 572 LSREDRVEEAIKMFHIVQD------LGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
               PN +TY +LI G  + +   E + LL E+  +GV
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 32/186 (17%)

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
           +N  +  L     +  A+RL+D        P+ +    L+   C  G+ +    +  + E
Sbjct: 46  ANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105

Query: 290 SMGCKHDDFSYNILINGYCKNKEVE--------------------------------EAL 317
             G   D F+YN L+ GYC+  +++                                EAL
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEAL 165

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           SL +++  +G +P+VVTY  L   + +     +A+++  EM+      +  TY   I+G+
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225

Query: 378 CVRPQV 383
           C   +V
Sbjct: 226 CREGRV 231



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++N LL  + K+ + +  L L   L S G+ PD+ TYS +I    +  +V  
Sbjct: 521 HGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEE 580

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      P  V +  ++  LC       A   F  + + GC PN +TY TLI 
Sbjct: 581 AIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640

Query: 125 GLCRTGHTIVALNLFKEM 142
           GL          +L +E+
Sbjct: 641 GLANEDFLKETRDLLREL 658


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 188/372 (50%), Gaps = 12/372 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  V ++N L+    +  H D    L   + S+ + PD YTY+ LI   C  G+V+   
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 162

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR    PNVVT+T L++ +C  S   +A A+  +++A GC PN++TYN +ING+
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A +L   +           +P+TV+Y+ ++ GLC     D  +ELF +M  +
Sbjct: 223 CREGRVDDARDLLNRL------FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 276

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N  PN VT+  LI  FC       A  +L +M +     N    N+++N +CK G++D+A
Sbjct: 277 NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA 336

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            + L+ M      P+  +Y T++ G C   + N  KEL   M    C  ++ ++N  I  
Sbjct: 337 FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI 396

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C+   +E+A+ L  ++   G    VVTYN L +G       + AL+LF  M       +
Sbjct: 397 LCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPN 453

Query: 367 TCTYRTFIDGLC 378
           T TY T + GLC
Sbjct: 454 TITYTTLLTGLC 465



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 189/401 (47%), Gaps = 32/401 (7%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  L+  L         LSL   +   G  P++ TY++L+   CK       
Sbjct: 137 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN+VT+  +I G+C E R+ +A  L  +L ++GC+P+ ++Y TL+ G
Sbjct: 197 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKG 256

Query: 126 LCRTGHTIVALNLFKEMTNGN---GEI------------GVVFKP--------------N 156
           LC +        LF EM   N    E+            G+V +               N
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATN 316

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T   +I+I+ +CK+G VD A +    M     NP+ ++YT+++ G C A  WN+AK LL 
Sbjct: 317 TTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLK 376

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EMV     PN V+ N  +  LC+ G ++ A  L++ M +        TYN L++GFC+ G
Sbjct: 377 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG 436

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            I+   ELF    SM CK +  +Y  L+ G C  + ++ A  L  E+  +   P VVT+N
Sbjct: 437 HIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFN 493

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L +   +    + A++L  +M  +    +  TY T  DG+
Sbjct: 494 VLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 174/339 (51%), Gaps = 9/339 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D++ Y+ L+  +C+ G +     + G +     AP+  T+T LI+ LC   R+ +A +L 
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             +   GC+PNV+TY  L+  +C+      A+ +  EM            PN VTY++II
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG------CTPNIVTYNVII 219

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G+C+EG VD A++L  ++      P+ V+YT+L+ G C +  W++ + L  EM+++   
Sbjct: 220 NGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 279

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+ ++++   C+ G ++ A ++L  M + +   N    N +++  C  G+++   + 
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKF 339

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             +M S GC  D  SY  ++ G C+ +   +A  L  E+      P  VT+NT    L +
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ 399

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               E+A+ L  +MQ +       TY   ++G CV+  +
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 9/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  LL  L  +K +D V  LF  +      P+  T+ +LI  FC+ G V     +
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     A N      +I  +C + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L KEM   N        PN VT++  I  LC++G +++A  L  QM+    
Sbjct: 365 AERWNDAKELLKEMVRNN------CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGC 418

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              VVTY +L++GFC     + A  L   M     +PN ++   ++  LC   ++D A+ 
Sbjct: 419 TVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAE 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+  D  PN  T+N L++ FC  G ++   EL   M   GC  +  +YN L +G  
Sbjct: 476 LVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGIT 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+   E+AL L + L  KG+ P V+T++++   L +  + E A+++F   Q   +     
Sbjct: 536 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKAL 595

Query: 369 TYRTFIDGLCVRPQV 383
            Y   + GLC R ++
Sbjct: 596 VYNKILLGLCKRHEI 610



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 44/338 (13%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR GH   A  
Sbjct: 72  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ +I  LC  G V  A  L   M      PNVVTYT 
Sbjct: 132 LIGSMP---------VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 182

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C  + + +A  +L EM  +G  PN+V+ NVI+N +C+ G++D+A  LL+ +    
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY----------------- 300
            +P+  +Y TL+ G C + + + V+ELF  M    C  ++ ++                 
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 301 ------------------NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
                             NI+IN  CK   V++A    N +   G  P  ++Y T+  GL
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
               +   A +L  EM  N+   +  T+ TFI  LC +
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 26/340 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D        + S G  PD  +Y+ ++   C+  + +    +   ++R
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           +   PN VTF + I  LC +  I +A  L  +++  GC   V+TYN L+NG C  GH   
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440

Query: 135 ALNLFKEMT---------------------NGNGEIGVVF-----KPNTVTYSIIIDGLC 168
           AL LF+ M                      +   E+          PN VT++++++  C
Sbjct: 441 ALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++GF+D+A EL  QM      PN++TY +L  G        +A  LL  +V +GV P+V+
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + I+  L K  +++ A ++  L     +RP A  YN ++ G C   +I+   +    M
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            S GC  ++ +Y ILI G  +   ++EA  L + L  +G+
Sbjct: 621 VSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 14/295 (4%)

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           + L   +R+VE +A        G  P+V     LI  LCR G T  A  + +    G+G 
Sbjct: 53  EDLAGAARLVELSA-----SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGS 106

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
              VF      Y+ ++ G C+ G +D A+ L   M    + P+  TYT LI   C     
Sbjct: 107 PVDVF-----AYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRV 158

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            +A  LL +M+ +G QPNVV+  V++  +CKN   + A  +LD M      PN  TYN +
Sbjct: 159 ADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 218

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++G C  G+++  ++L   + S GC+ D  SY  L+ G C +K  ++   L+ E+  K  
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            P  VT++ L          ERA+++  +M  ++ A +T      I+ +C + +V
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRV 333



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 10/228 (4%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +      P++ T+++L+N FC+ G +   
Sbjct: 449 PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEA 508

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++T+ +L  G+  +    +A  L   L + G  P+VIT++++I  
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 568

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L +      A+ +F        +IG+  +P  + Y+ I+ GLCK   +D A +    M  
Sbjct: 569 LSKEDRVEEAIQMFHLAQ----DIGM--RPKALVYNKILLGLCKRHEIDNAIDFLAYMVS 622

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
               PN  TY  LI G        EA+ LL  +  +G    VVS N+I
Sbjct: 623 NGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG----VVSKNLI 666



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 54/126 (42%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++N L   + K+   +  L L   L S G+ PD+ T+S +I    K  +V  
Sbjct: 518 HGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEE 577

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F         P  + +  ++ GLC    I  A      + + GC PN  TY  LI 
Sbjct: 578 AIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIE 637

Query: 125 GLCRTG 130
           GL R G
Sbjct: 638 GLAREG 643


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 10/338 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD YT++ LI  +C+  QV +   +F ++    FA +VV++ +LI+GLC   RI EA
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF ++     +P++  Y  L+ GLC        L + + M     E+G  ++P+T  Y
Sbjct: 65  VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMK----ELG--WRPSTRAY 114

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + ++D  C+E    +A+E+  +M  + L P VVT T++I+ +C     ++A  +L  M  
Sbjct: 115 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 174

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G +PNV + N ++   C  GK+  A  LL+ M  C V P+A TYN L+ G C+ G I  
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 234

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L   ME  G   D ++YN LIN  CK+   ++A SL++ L  +GIKP  VT+N+L +
Sbjct: 235 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  +A+ A K   +M       DT TY +FI+ LC
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 33/404 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+    +    D    LF ++   G   D+ +Y+ LI   C+ G++     +
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG + +    P++  + +L+KGLC   R  E   +  ++K  G  P+   Y  +++  CR
Sbjct: 68  FGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
                 A  + +EM        VV                              KPN  T
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++ G C EG V KA  L  +M+   +NP+ VTY  LI G C       A  LL  M 
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+  +  + N ++N LCK+G+ D A  L D +    ++PNA T+N+L++G C +GK +
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +    M S GC  D ++Y+  I   CK K  +E LS   E+  K +KP+ V Y  + 
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           H L + R      + + EM  +    D  TY T +   C+  ++
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRL 407



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 169/368 (45%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +  L+  L   +  +  L + +R+  +G  P    Y+ +++  C+  +      +
Sbjct: 74  PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 133

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     AP VVT T++I   C E R+ +A  +   +K  GC+PNV TYN L+ G C 
Sbjct: 134 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 193

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  +M       GV   P+ VTY+++I G C +G ++ A  L   M+ + L
Sbjct: 194 EGKVHKAMTLLNKMR----ACGV--NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 247

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  TY +LI+  C     ++A  L   +  +G++PN V+ N ++N LCK+GK D A +
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 307

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ MV     P+ +TY++ ++  C              M     K    +Y I+I+   
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 367

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +        + E+   G  P VVTY T         +   A  + +EM  N V  DT 
Sbjct: 368 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTM 427

Query: 369 TYRTFIDG 376
            Y T +DG
Sbjct: 428 AYNTLMDG 435



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 58/421 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+     + H ++   L + +   GL  D YTY+ LIN  CK G+      +
Sbjct: 214 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTF SLI GLC   +   A     K+ + GC P+  TY++ I  LC+
Sbjct: 274 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +   L+   EM   +       KP+TV Y+I+I  L KE         + +M     
Sbjct: 334 MKGSQEGLSFIGEMLQKD------VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+VVTYT+ +  +C     NEA+ +L+EM   GV  + ++ N +M+     G+ D+A  
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 447

Query: 249 LL----------------------------------------------------DLMVQC 256
           +L                                                    D+M + 
Sbjct: 448 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 507

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           +  PN+ TY+++++GF   G+      L   M+      ++  Y  L+  +CK+K   +A
Sbjct: 508 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 567

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L   +   G  P +++Y  L  GL    Q ++A ++F+  +  D + D   ++  IDG
Sbjct: 568 WVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 627

Query: 377 L 377
           L
Sbjct: 628 L 628



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 183/416 (43%), Gaps = 50/416 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++    + +       + + +   GL P + T + +IN +CK G++S    +
Sbjct: 109 PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV 168

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + LR C  PNV T+ +L++G C E ++ +A  L  K++A G  P+ +TYN LI G C
Sbjct: 169 LELMKLRGC-KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQC 227

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVF------------------------------KPNT 157
             GH   A  L + M  G+G I   +                              KPN 
Sbjct: 228 IDGHIESAFRLLRLM-EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VT++ +I+GLCK G  D A +   +M      P+  TY+S I   C      E    + E
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+ + V+P+ V+  +++++L K       +R    MV     P+  TY T M  +C+ G+
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N  + + + M   G   D  +YN L++G+    + + A+S+  ++      P   TY  
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 338 LFHGLFEIRQAERALK-----------------LFVEMQGNDVAADTCTYRTFIDG 376
           L   L  +R  E  L                  LF  M+ N+   ++ TY + ++G
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 522



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 58/386 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGF 66
           P   +FN L+  L K+   D      +++ S G  PD YTYS  I   CKM   Q  L F
Sbjct: 284 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 343

Query: 67  V---------------------------------IFGRILRSCFAPNVVTFTSLIKGLCA 93
           +                                  +G ++ S   P+VVT+T+ ++  C 
Sbjct: 344 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 403

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R+ EA  +  ++   G   + + YNTL++G    G T  A+++ K+MT+      V  
Sbjct: 404 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS------VAS 457

Query: 154 KPNTVTYSIIIDGLCKEGFVD-----------KAKEL------FLQMKYENLNPNVVTYT 196
            PN  TY I++  L +   V+           KA EL      F  MK     PN  TY+
Sbjct: 458 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 517

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           S++ GF       EA  L+  M +  +  N      ++   CK+ +  +A  L+  M+Q 
Sbjct: 518 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 577

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P   +Y  L+ G    G+ ++ KE+F++        D+  + ++I+G  K    + +
Sbjct: 578 GFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 637

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGL 342
             +   L     +P+  TY  L   L
Sbjct: 638 REMIIMLERMNCRPSHQTYAMLTEEL 663



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 4/126 (3%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV+   RP+A+T+N+L+ G+C T +++  ++LF  M   G   D  SY  LI G C+   
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++EA+ L+ E+     +P +  Y  L  GL    + E  L +   M+       T  Y  
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 373 FIDGLC 378
            +D  C
Sbjct: 117 VVDFRC 122


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 202/399 (50%), Gaps = 31/399 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +++ ++  L K +      +  +++ + G+ PD +TY+ LI  +   GQ      
Sbjct: 255 PPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 314

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + R    P+VVT   L+  LC   +I EA  +F  +   G  P+V +Y  ++NG  
Sbjct: 315 VFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYA 374

Query: 128 RTGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNT 157
             G  +   +LF  M  G+G                      +  ++F        KP+ 
Sbjct: 375 TKGCLVDMTDLFDLML-GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 433

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY+ +I  LC+ G +D A E F QM  + + P+   Y  LI GFC      +AK L++E
Sbjct: 434 VTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILE 493

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +++ G++ ++V  + I+N LCK G++ +A  + DL V     P+A  Y+ LMDG+CL GK
Sbjct: 494 IMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGK 553

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   +F +M S G + +   Y  L+NGYCK   ++E LSL+ E+  KGIKP+ + YN 
Sbjct: 554 MEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 613

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +  GLF   +   A   F EM  + +A + CTY   + G
Sbjct: 614 IIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRG 652



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 190/389 (48%), Gaps = 45/389 (11%)

Query: 31  LSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
           ++LF R  S       L P  +TY+IL++C  +  +  L    FG++LR+    +++   
Sbjct: 95  VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIAN 154

Query: 86  SLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KG C   R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L + M  
Sbjct: 155 HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 214

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
           G    G V  P+ V Y+ +ID   KEG V+KA +LF +M    + P++VTY+S++H  C 
Sbjct: 215 G----GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 270

Query: 205 ANDWNEAKGLLIEMVDQGV-----------------------------------QPNVVS 229
           A    +A+  L +MV++GV                                    P+VV+
Sbjct: 271 ARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 330

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N++M  LCK GK+  A  + D M      P+ F+Y  +++G+   G +  + +LF  M 
Sbjct: 331 LNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML 390

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   D +++++LI  Y     +++A+ ++NE+   G+KP VVTY T+   L  I + +
Sbjct: 391 GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A++ F +M    VA D   Y   I G C
Sbjct: 451 DAMEKFNQMIDQGVAPDKYAYHCLIQGFC 479



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 185/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V + N+L+G L K         +F  +   G  PD+++Y I++N +   G +  
Sbjct: 322 HSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVD 381

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +L    AP++ TF+ LIK       + +A  +F +++  G +P+V+TY T+I 
Sbjct: 382 MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIA 441

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LCR G    A+  F +M +     GV   P+   Y  +I G C  G + KAKEL L++ 
Sbjct: 442 ALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYHCLIQGFCTHGSLLKAKELILEIM 495

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +  ++V ++S+I+  C      +A+ +    V+ G  P+ V  +++M+  C  GKM+
Sbjct: 496 NNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKME 555

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A R+ D MV   + PN   Y TL++G+C  G+I+    LF  M   G K     YNI+I
Sbjct: 556 KALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 615

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G         A   ++E+   GI     TYN +  G F+ R  + A+ LF E++  +V 
Sbjct: 616 DGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVK 675

Query: 365 ADTCTYRTFIDGL 377
            D  T  T I G+
Sbjct: 676 IDIITLNTMIAGM 688



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 6/356 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P V S+ I+L   A       +  LF  +   G+ PD+YT+S+LI  +   G + 
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLD 415

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
              +IF  +      P+VVT+T++I  LC   ++ +A   F ++   G  P+   Y+ LI
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 475

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C  G  + A  L  E+ N    + +VF      +S II+ LCK G +  A+ +F   
Sbjct: 476 QGFCTHGSLLKAKELILEIMNNGMRLDIVF------FSSIINNLCKLGRIMDAQNIFDLT 529

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                +P+ V Y+ L+ G+C      +A  +   MV  G++PNVV    ++N  CK G++
Sbjct: 530 VNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRI 589

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D    L   M+Q  ++P+   YN ++DG  + G+    K  F  M   G   +  +YNI+
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIV 649

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           + G+ KN+  +EA+ L+ EL    +K  ++T NT+  G+F+ R+ E A  LF  + 
Sbjct: 650 LRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 705



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++      + ++  
Sbjct: 94  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            +      ++ G C+    D+A ++ L    E    P+V +Y+ L+   C      +A  
Sbjct: 154 NH------LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 207

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+   +++   K G ++ A  L   MVQ  + P+  TY++++  
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    + + +     M + G   D+++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT N L   L +  + + A  +F  M       D  +Y+  ++G   +
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATK 376


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 190/371 (51%), Gaps = 7/371 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTV--LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           + S N  L  +A++     V   +   R +   + P L+TY ILI C C+ G++ LGF  
Sbjct: 61  IRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAG 120

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLC 127
            G +++  +    + FT L+K LCAE R   A   +  ++   GC P+V +YN L+ GLC
Sbjct: 121 LGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLC 180

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
               +  AL L   M +  G+      P+ V+YS IIDGL KEG  DKA   + +M    
Sbjct: 181 HESRSQEALELLHMMADDGGDC----PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERG 236

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VVTY +++   C A   ++A  +L  MV  GV P+ ++ N I++  C +G+   A 
Sbjct: 237 ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+ M    V P+A TY +LMD  C  G+    +++  SM   G K +  +Y+ L++GY
Sbjct: 297 GILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGY 356

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                + E   L + +   GI+P    ++ L     + +  + A+ +F +M+   +  D 
Sbjct: 357 ATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDV 416

Query: 368 CTYRTFIDGLC 378
            TY T IDGLC
Sbjct: 417 VTYGTLIDGLC 427



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 122/239 (51%), Gaps = 6/239 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S++ ++  L K    D   S +  +   G+ PD+ TY+ ++   CK   +     
Sbjct: 203 PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R++++   P+ +T+ S++ G C+  +  EA  +  K+ + G EP+ +TY +L++ LC
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  I A  +   M      I    KPN +TYS ++ G   +G + + ++L   M    
Sbjct: 323 KNGRCIEARKILDSM------IKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNG 376

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           + P+   ++ LI       + + A  +  +M  Q + P+VV+   +++ LCK+G++D+A
Sbjct: 377 IQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 194/371 (52%), Gaps = 6/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+     + ++   +  F+ +    L    ++   L +   K+   S  +  +  IL
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
              + P+V  F  L+  LC E +I EA  LF ++   G  P V+++NTLING C++G+  
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
               L + M         VF P+  TYS++I+GLCKEG +D A +LFL+M    L PN V
Sbjct: 278 QGFRLKRFMMENR-----VF-PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+T+LI+G C     +    +  +M+ +GV+P+V++ N ++N LCK G +  A +L+  M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            Q  ++P+ FTY  L+DG C  G +    E+   M   G + D+ ++  LI+G+C+  +V
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA     E+   GIKP   TY  + HG  +    +   KL  EMQ +       TY   
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 374 IDGLCVRPQVR 384
           ++GLC + Q++
Sbjct: 512 LNGLCKQGQMK 522



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/335 (35%), Positives = 181/335 (54%), Gaps = 11/335 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN L+    K+ + D    L + +    +FPD++TYS+LIN  CK GQ+     +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTFT+LI G C   R      ++ ++   G +P+VITYNTLINGLC+
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EMT          KP+  TY+++IDG CKEG ++ A E+  +M  E +
Sbjct: 378 VGDLREAKKLVIEMTQRG------LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T+LI GFC      EA+  L EM++ G++P+  +  ++++  CK G +    +
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491

Query: 249 LLDLMVQCDVR-PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           LL  M QCD   P   TYN L++G C  G++     L  +M ++G   DD +YNIL+ G+
Sbjct: 492 LLKEM-QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           CK+   E+   L +E   KG+     +Y +L   L
Sbjct: 551 CKHGNREDFDKLQSE---KGLVQDYGSYTSLIGDL 582



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 191/373 (51%), Gaps = 14/373 (3%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P  S   L   L K        + ++ +   G  PD+  +++L++  CK  +++   ++F
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE----PNVITYNTLING 125
           G I +    P VV+F +LI G C    + +      +LK F  E    P+V TY+ LING
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF----RLKRFMMENRVFPDVFTYSVLING 304

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G    A  LF EM +     G+V  PN VT++ +I+G C  G  D   E++ QM  
Sbjct: 305 LCKEGQLDDANKLFLEMCDR----GLV--PNDVTFTTLINGHCVTGRADLGMEIYQQMLR 358

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P+V+TY +LI+G C   D  EAK L+IEM  +G++P+  +  ++++  CK G +++
Sbjct: 359 KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +   MV+  +  +   +  L+ GFC  G++   +     M   G K DD +Y ++I+
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIH 478

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+CK  +V+    L  E+   G  P VVTYN L +GL +  Q + A  L   M    V  
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538

Query: 366 DTCTYRTFIDGLC 378
           D  TY   ++G C
Sbjct: 539 DDITYNILLEGHC 551



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 177/386 (45%), Gaps = 9/386 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKM 59
           M H   +   +S    LL  +   K  ++  S+F   L + G       +S+L+N +   
Sbjct: 109 MTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDS 168

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G  S     F  + +        +   L   L   +    A A + ++   G  P+V  +
Sbjct: 169 GYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKF 228

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV-FKPNTVTYSIIIDGLCKEGFVDKAKE 178
           N L++ LC+      A  LF       GEIG    +P  V+++ +I+G CK G +D+   
Sbjct: 229 NVLMHRLCKEHKINEAQLLF-------GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M    + P+V TY+ LI+G C     ++A  L +EM D+G+ PN V+   ++N  C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G+ D    +   M++  V+P+  TYNTL++G C  G +   K+L + M   G K D F
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y +LI+G CK  ++E AL +  E+  +GI+   V +  L  G     Q   A +   EM
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR 384
               +  D  TY   I G C +  V+
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVK 487


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 204/422 (48%), Gaps = 43/422 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L KN+  +   S    +   G+FPD+ TY+ LIN +C+ G +   F +  
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 417

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P V T+ ++I GLC   + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 477

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           + + A  +F EM +     GVV  P+ V++S +I  L K G +D+A + F  MK   L P
Sbjct: 478 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK----------- 239
           + V YT LI GFC     +EA  +  EM++QG   +VV+ N I+N LCK           
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELF 591

Query: 240 ------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
                                   +G M+ A  L ++M+Q +++P+  TYNTL+DGFC  
Sbjct: 592 TEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 651

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            ++ +V EL+  M S     +  SY ILINGYC    V EA  L++E+  KG + T++T 
Sbjct: 652 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 711

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGN 393
           NT+  G      A +A +    M    +  D  TY T I+G      +   F    +  N
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 771

Query: 394 SG 395
           SG
Sbjct: 772 SG 773



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++NILL    +N +      +F  + S G+ PDL ++S LI    K G +      
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +  AP+ V +T LI G C    + EA  +  ++   GC  +V+TYNT++NGLC+
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EMT    E GV   P+  T++ +I+G  K+G ++KA  LF  M   NL
Sbjct: 581 EKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI GFC  ++  +   L  +M+ + + PN +S  +++N  C  G +  A R
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D MV+        T NT++ G+C  G   +  E   +M   G   D  +YN LING+ 
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++ A +L N++   G+ P V+TYN + +G     + + A  + ++M    V  D  
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 814

Query: 369 TYRTFIDG 376
           TY + I+G
Sbjct: 815 TYTSLING 822



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+G L+KN   D  L  F+ + + GL PD   Y+ILI  FC+ G +S    +
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 555

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +VVT+ +++ GLC E  + EA  LFT++   G  P+  T+ TLING  +
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF+ M   N       KP+ VTY+ +IDG CK   ++K  EL+  M    +
Sbjct: 616 DGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  LI+G+C+    +EA  L  EMV++G +  +++ N I+   C+ G    A  
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYNTL++GF     ++R   L   ME+ G   D  +YN+++NG+ 
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 789

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +   ++EA  +  ++  +G+ P   TY +L +G       + A ++  EM
Sbjct: 790 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 839



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + +        F+ L S GL   +   + L+    K+G V L + I+  ++
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RS    NV T   +I  LC   +I    +  + ++  G  P+V+TYNTLIN  CR G   
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M+ G G      KP   TY+ II+GLCK G   +AK +  +M    ++P+  
Sbjct: 411 EAFELMDSMS-GKG-----LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  L+   C  ++  +A+ +  EM  QGV P++VS + ++  L KNG +D A +    M
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+   Y  L+ GFC  G ++   ++   M   GC  D  +YN ++NG CK K +
Sbjct: 525 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKML 584

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ E+  +G+ P   T+ TL +G  +     +A+ LF  M   ++  D  TY T 
Sbjct: 585 SEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 644

Query: 374 IDGLC 378
           IDG C
Sbjct: 645 IDGFC 649



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 41/334 (12%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
             N + F  L++      ++ E    F  LK+ G   ++   N+L+ GL + G   +A  
Sbjct: 285 GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 344

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +++E+     ++      N  T +I+I+ LCK   ++  K     M+ + + P+VVTY +
Sbjct: 345 IYQEVVRSGVQV------NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI+ +C      EA  L+  M  +G++P V + N I+N LCK GK   A  +LD M++  
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458

Query: 258 VRPNAFTYNTLMDGFCL-----------------------------------TGKINRVK 282
           + P+  TYN L+   C                                     G +++  
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           + F  M++ G   D+  Y ILI G+C+N  + EAL + +E+  +G    VVTYNT+ +GL
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            + +    A +LF EM    V  D  T+ T I+G
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 15/331 (4%)

Query: 62  VSLGFVIFGRILRSC--FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           + LG      I  +C  F  ++ +F+++I  L    R+ +A A+  ++        V   
Sbjct: 215 LQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIV 274

Query: 120 NTLINGLCRTGHTIVALNLF-------KEMTNGNGEIGVVFKPNTVTYSI-----IIDGL 167
            +L+      G   +  +L        +++  G  E   V K   +  SI     ++ GL
Sbjct: 275 ESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG-CEAFRVLKSKGLCVSINACNSLLGGL 333

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K G+VD A E++ ++    +  NV T   +I+  C        K  L +M ++GV P+V
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++N  C+ G ++ A  L+D M    ++P  FTYN +++G C TGK  R K +   
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M  +G   D  +YNIL+   C+N  + +A  +++E+P +G+ P +V+++ L   L +   
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++ALK F +M+   +A D   Y   I G C
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFC 544



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 57/107 (53%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K ++ D   +L  ++ + GL PD+ TY++++N F + G++    +I
Sbjct: 741 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 800

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
             +++     P+  T+TSLI G   ++ + EA  +  ++   G  P+
Sbjct: 801 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 196/400 (49%), Gaps = 54/400 (13%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + PDL TY ILI C C+ G++ LGF   G +++  F    +TFT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+NGLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD 186

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
             G       P+ V+Y+ +I+G  KEG  DKA   + +M    + P+VVTY+S+I   C 
Sbjct: 187 DRGGGS---PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243

Query: 205 AN----DWNEAK-GLLIE-------MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
                  W+  K G +IE       MV  GV+P++++ + +++  C  GKMD A +LL  
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI-------- 304
           MV   ++PN  TY+TL++G+C   ++     LF  MES G   D  +YNI++        
Sbjct: 304 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 363

Query: 305 ---------------------------NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                                      +G CKNK  ++AL ++  L    +K    T+N 
Sbjct: 364 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 423

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +   L ++ + + A  LFV    N +  +  TYR   + +
Sbjct: 424 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 463



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 56/346 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S+N LL  L         L L   +      G  PD+ +Y+ +IN F K G     
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCA------------ESRIVEAAALFTKLKAFGCE 113
           +  +  +L     P+VVT++S+I  LC             E R++E+  LF  +   G +
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P++ITY+TLI+G C  G    A+ L       +G + V  KPNTVTYS +I+G CK   +
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLL------SGMVSVGLKPNTVTYSTLINGYCKISRM 329

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           + A  LF +M+   ++P+++TY  ++ G         AK L + + + G Q  + + N+I
Sbjct: 330 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 389

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV------- 286
           ++ LCKN   D+A ++   +   D++  A T+N ++D     G+ +  K+LFV       
Sbjct: 390 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 449

Query: 287 ----------------------------SMESMGCKHDDFSYNILI 304
                                       SME  GC  D    N ++
Sbjct: 450 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 495



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 41/274 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLS------------LFKRLNSIGLFPDLYTYSILINCF 56
           P V +++ ++  L K +  D   S            LF  +  IG+ PD+ TYS LI+ +
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 288

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           C  G++     +   ++     PN VT+++LI G C  SR+ +A  LF ++++ G  P++
Sbjct: 289 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 348

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------------ 152
           ITYN ++ GL +T  T  A  L+  +T    +I +                         
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408

Query: 153 -----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                 K    T++I+ID L K G  D+AK+LF+      L PN  TY  +         
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 468

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             E   L + M D G   +    N I+ EL + G
Sbjct: 469 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 16/210 (7%)

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P++ TY  LI   C A   +     L  ++ +G +   ++   ++  LC + +  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 246 ASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYN 301
           A  + L  M +    PN F+YN L++G C   +     EL   M      G   D  SY 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL--------- 352
            +ING+ K  + ++A S Y+E+  +GI P VVTY+++   L + +  ++           
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260

Query: 353 ---KLFVEMQGNDVAADTCTYRTFIDGLCV 379
              KLF  M    V  D  TY T IDG C+
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCL 290


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 182/376 (48%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N  L  L+K    D     F+ +   G+ P ++TY+I+I   CK G +     +
Sbjct: 95  PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P++VT+ +LI G      + E+  LF ++K  GCEP+VITYN LIN  C+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A   F+EM + +       KPN ++YS +ID LCKEG +  A + F+ M    L
Sbjct: 215 FKGMLRAFEFFREMKDKD------LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY+SLI   C A +  EA  L  EM+ + V  N+V+   +++ LC+ G M+ A  
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  V PN   Y  L+ G      +++  ELF  M     K D   +  ++ G C
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++EE   +  E+   GI    V Y TL    F+      A+ L  EM+         
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448

Query: 369 TYRTFIDGLCVRPQVR 384
           T+   IDGLC R  V+
Sbjct: 449 TFCALIDGLCKRGLVQ 464



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 195/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++G + K     T  SLF+++  +GL PD+ TY+ LI+ + K+G +     +
Sbjct: 130 PTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCL 189

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V+T+ +LI   C    ++ A   F ++K    +PNVI+Y+TLI+ LC+
Sbjct: 190 FEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCK 249

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A+  F +MT     +G++  PN  TYS +ID  CK G + +A  L  +M  E++
Sbjct: 250 EGMMQMAIKFFVDMTR----VGLL--PNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+VTYT+L+ G C     NEA+ L   M   GV PN+ +   +++   K   MD A  
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M + D++P+   + T++ G C   K+   K +   M+  G   +   Y  L++ Y 
Sbjct: 364 LFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF 423

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA++L  E+   G + TVVT+  L  GL +    + A+  F  M  +D+  +  
Sbjct: 424 KAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVA 483

Query: 369 TYRTFIDGLC 378
            Y   IDGLC
Sbjct: 484 VYTALIDGLC 493



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 6/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+  L K       +  F  +  +GL P+ +TYS LI+  CK G +   F++
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFML 294

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+     N+VT+T+L+ GLC E  + EA  LF  +   G  PN+  Y  LI+G  +
Sbjct: 295 ADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIK 354

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF EM   +       KP+ + +  I+ GLC E  +++ K +  +MK   +
Sbjct: 355 VRSMDKAMELFNEMREKD------IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V YT+L+  +  A +  EA  LL EM D G +  VV+   +++ LCK G +  A  
Sbjct: 409 GANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIY 468

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M   D++PN   Y  L+DG C    I   K+LF  M+      D  +Y  +I+G  
Sbjct: 469 YFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNL 528

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           K+   +EAL++ N++   GI+  +  Y +L  GL +  Q ++A K   EM G  +  D
Sbjct: 529 KHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L +    +     F R+    + P   + +  ++   K G+  L    
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +  AP V T+  +I  +C E  ++ A +LF ++K  G  P+++TYNTLI+G  +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    ++ LF+EM     E      P+ +TY+ +I+  CK   + +A E F +MK ++L
Sbjct: 180 IGLLDESVCLFEEMKFMGCE------PDVITYNALINSFCKFKGMLRAFEFFREMKDKDL 233

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV++Y++LI   C       A    ++M   G+ PN  + + +++  CK G +  A  
Sbjct: 234 KPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFM 293

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+Q  V  N  TY TL+DG C  G +N  +ELF +M   G   +  +Y  LI+G+ 
Sbjct: 294 LADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI 353

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +++A+ L+NE+  K IKP ++ + T+  GL    + E    +  EM+ + + A+  
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPV 413

Query: 369 TYRTFIDG 376
            Y T +D 
Sbjct: 414 IYTTLMDA 421



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 161/318 (50%), Gaps = 6/318 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  LL  L +    +    LF+ +   G+ P+L  Y+ LI+   K+  +     +F 
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+++ + +++ GLC+ES++ E   + T++K  G   N + Y TL++   + G
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A+NL +EM +   E+ VV      T+  +IDGLCK G V +A   F +M   +L P
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVV------TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV  YT+LI G C  N   +AK L  EM D+ + P+ ++   +++   K+G    A  + 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M++  +  + + Y +L+ G    G++ + ++    M   G   D+     L+  + + 
Sbjct: 541 NKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL 600

Query: 311 KEVEEALSLYNELPFKGI 328
             ++EA+ L NEL  KG+
Sbjct: 601 GNIDEAIELQNELVEKGL 618



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 115/224 (51%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P    +  +   L + G ++ A + FL+M    + P   +  + +H    A + + ++  
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +MV  G+ P V + N+++  +CK G M  A  L + M +  + P+  TYNTL+DG+  
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G ++    LF  M+ MGC+ D  +YN LIN +CK K +  A   + E+  K +KP V++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           Y+TL   L +    + A+K FV+M    +  +  TY + ID  C
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANC 283



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 4/148 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V+ +  L+  L KN        LF  +    + PD   Y+ +I+   K G    
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  +++      ++  +TSL+ GL    ++ +A     ++   G  P+     TL  
Sbjct: 536 ALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD----ETLCT 591

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            L R  + +  ++   E+ N   E G++
Sbjct: 592 RLLRKHYELGNIDEAIELQNELVEKGLI 619


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 171/333 (51%), Gaps = 4/333 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S++  +  L K       + +F+ +   G  PD +TY+ILIN  CK  Q+ +G  +  
Sbjct: 91  VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +    F+P VVT+T+LI G C   R+  A  +  +++  G  PN +TY  LI GLC  G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ + KEM     E      PN VTY+ +I GLC++G  +   E   +M      P
Sbjct: 211 EVERAILVLKEMKLRGNECC----PNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFP 266

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  TYT+LIHG C    + EA  LL EMV  G + +VV  N +++ LCK G++D A  + 
Sbjct: 267 NNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQ 326

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
            LMV+  V P+ FTY +L+ G C  G ++    L   M + G   +  +Y  LING+ + 
Sbjct: 327 ILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQA 386

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              + AL L NE+   G+ P    Y  LF  L+
Sbjct: 387 DRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 173/335 (51%), Gaps = 8/335 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+ +YS  IN  CK GQ++    IF  +     AP+  T+  LI GLC ++++    +L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +++A G  P V+TY TLI+G C  G    A+++  EM +          PNTVTY+ +I
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG------ITPNTVTYTALI 203

Query: 165 DGLCKEGFVDKAKELFLQMKYENLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            GLC  G V++A  +  +MK       PNVVTYT LIHG C    +      L EM+  G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             PN  +   +++ LC+ G    A+ LL+ MV      +   YN+L+DG C  G+++  +
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E+ + M   G   D F+Y  LI G C    ++EAL L  E+  KGI P  VTY TL +G 
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  + + AL+L  EM+ N +      Y+     L
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 8/299 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   ++NIL+  L K+   +  +SL   + + G  P + TY+ LI+ FC  G+V    
Sbjct: 122 SAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAM 181

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--CEPNVITYNTLIN 124
            I   +      PN VT+T+LI+GLC    +  A  +  ++K  G  C PNV+TY  LI+
Sbjct: 182 DILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G   + +    EM      I   F PN  TY+ +I GLC++G   +A  L  +M 
Sbjct: 242 GLCQKGLFEMGMEFLDEMI-----ISGCF-PNNATYTALIHGLCQKGSFLEAAVLLNEMV 295

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                 +VV Y SLI G C   + + A+ + I MV++GV P+V +   ++  LC  G +D
Sbjct: 296 AIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLD 355

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            A  L+  M    + PN+ TY TL++GF    + +   +L   M+S G       Y IL
Sbjct: 356 EALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 142/271 (52%), Gaps = 14/271 (5%)

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           + +VI+Y+  INGLC+ G    A+ +F+EM            P++ TY+I+I+GLCK+  
Sbjct: 88  DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGS------APDSFTYNILINGLCKDAQ 141

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           ++    L  +M+    +P VVTYT+LIHGFC A   + A  +L EM  +G+ PN V+   
Sbjct: 142 LEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVR-----PNAFTYNTLMDGFCLTGKINRVKELFVS 287
           ++  LC  G+++ A  +L  M    +R     PN  TY  L+ G C  G      E    
Sbjct: 202 LIQGLCDCGEVERAILVLKEM---KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDE 258

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   GC  ++ +Y  LI+G C+     EA  L NE+   G +  VV YN+L  GL ++ +
Sbjct: 259 MIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE 318

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + A ++ + M    VA D  TY + I GLC
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLC 349



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 2/233 (0%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + ++YS  I+GLCK+G + +A E+F +M+ +   P+  TY  LI+G C          L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM  +G  P VV+   +++  C  G++D A  +LD M    + PN  TY  L+ G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 276 GKINRVKELFVSMESMG--CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           G++ R   +   M+  G  C  +  +Y  LI+G C+    E  +   +E+   G  P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           TY  L HGL +      A  L  EM       D   Y + IDGLC   ++ F 
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 37/77 (48%)

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + + +  +L +Y           V++Y+   +GL +  Q   A+++F EM+    A D+ 
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 369 TYRTFIDGLCVRPQVRF 385
           TY   I+GLC   Q+  
Sbjct: 128 TYNILINGLCKDAQLEM 144


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 163/279 (58%), Gaps = 6/279 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +VV F +L+ GLC E R++EA AL  ++   G +PN +TY T++NG+C+ G T  ALNL 
Sbjct: 9   DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           ++M   +       K + V Y+ IID LCK+G   KA+ LF +M  + + PNV+TY  +I
Sbjct: 69  RKMDESH------IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMI 122

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G C    W +A+ LL +M++  V P+VV+ N ++N   K GK+  A  L   M+  ++ 
Sbjct: 123 DGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIF 182

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  TYN+L+DGFC   +++  K +F  M S G   +  + N LI G C+ K V++ + L
Sbjct: 183 PDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKL 242

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +E+  +G+ P  V+YNTL HG  +      A  LF EM
Sbjct: 243 LHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 151/268 (56%), Gaps = 6/268 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           GC+ +V+ +NTL+NGLCR G  + A  L   M   NG      +PN VTY  I++G+CK 
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVE-NGH-----QPNEVTYGTIVNGMCKM 58

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G  D A  L  +M   ++  +VV YT++I   C     ++A+ L  EM D+G+ PNV++ 
Sbjct: 59  GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N +++  C  GK  +A +LL  M++ +V P+  T+N L++ F   GKI+  +EL+  M  
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
                D  +YN LI+G+CK+  +++A  +++ +  KG  P V+T NTL  G    ++ + 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +KL  EM    +  D+ +Y T I G C
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFC 266



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FN L+  L +        +L  R+   G  P+  TY  ++N  CKMG       +  
Sbjct: 10  VVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++  S    +VV +T++I  LC +    +A  LFT++   G  PNV+TYN +I+G C  G
Sbjct: 70  KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L ++M   N        P+ VT++ +I+   KEG + +A+EL+ +M   N+ P
Sbjct: 130 KWTDAEQLLRDMIESN------VDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFP 183

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + +TY SLI GFC  +  ++AK +   MV +G  PNV++ N ++   C+  ++D+  +LL
Sbjct: 184 DTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLL 243

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             M++  + P++ +YNTL+ GFC  G +N  ++LF  M S
Sbjct: 244 HEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMIS 283



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 151/283 (53%), Gaps = 6/283 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D+  ++ L+N  C+ G+V     +  R++ +   PN VT+ +++ G+C       A
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  K+     + +V+ Y  +I+ LC+ GH   A NLF EM +       +F PN +TY
Sbjct: 65  LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKG-----IF-PNVLTY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG C  G    A++L   M   N++P+VVT+ +LI+ F      +EA+ L  EM+ 
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           + + P+ ++ N +++  CK+ ++D+A  + DLMV     PN  T NTL+ G C   +++ 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
             +L   M   G   D  SYN LI+G+C+  ++  A  L+ E+
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 6/247 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++  + K    D+ L+L ++++   +  D+  Y+ +I+  CK G  S    +
Sbjct: 43  PNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNL 102

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNV+T+  +I G C+  +  +A  L   +     +P+V+T+N LIN   +
Sbjct: 103 FTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVK 162

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L++EM   N     +F P+T+TY+ +IDG CK   +D AK +F  M  +  
Sbjct: 163 EGKISEAEELYREMLGRN-----IF-PDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGG 216

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+T  +LI G C A   ++   LL EM+ +G+ P+ VS N +++  C+ G ++ A  
Sbjct: 217 SPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQD 276

Query: 249 LLDLMVQ 255
           L   M+ 
Sbjct: 277 LFQEMIS 283



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 8/223 (3%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +R M  S     V  +  ++  L K+ H+    +LF  ++  G+FP++ TY+ +I+  C 
Sbjct: 68  LRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCS 127

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G+ +    +   ++ S   P+VVTF +LI     E +I EA  L+ ++      P+ IT
Sbjct: 128 YGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTIT 187

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN+LI+G C+      A ++F  M +  G       PN +T + +I G C+   VD   +
Sbjct: 188 YNSLIDGFCKHSRLDDAKHIFDLMVSKGG------SPNVITINTLIGGCCRAKRVDDGIK 241

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           L  +M    L P+ V+Y +LIHGFC A D N A+ L  EM+ Q
Sbjct: 242 LLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 40/219 (18%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV++G Q +VV+ N +MN LC+ G++  A  L+D MV+   +PN  TY T+++G C  G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    L   M+    K D   Y  +I+  CK+    +A +L+ E+  KGI P V+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 338 LFHG---LFEIRQAERALK--------------------------------LFVEMQGND 362
           +  G     +   AE+ L+                                L+ EM G +
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 363 VAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
           +  DT TY + IDG C   ++      F     KG S N
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPN 219


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 204/375 (54%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+L+G L + K       +F  + +I L   + TY+ LI+ +CK+G++   F +
Sbjct: 209 PNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKM 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+     APN++TF SL+ GLC   ++ EA +L  +++  G  P+  TY+ L +GL R
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L+++ T    E G+  + N  T SI+++GLCK+G V+KA+E+  +     L
Sbjct: 329 CDDGNGAMELYEQAT----EKGI--RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGL 382

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V Y + ++G+C   D N+A   +  M   G++PN ++ N ++++ C   +MD A  
Sbjct: 383 VADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEE 442

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M +  V P+  TYNTL+DG+      +R  ++   ME +G K +  SY  LIN  C
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++ EA  +  ++  +G+ P    YN L  G   + + + AL+ F EM  ++++    
Sbjct: 503 KDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLV 562

Query: 369 TYRTFIDGLCVRPQV 383
           TY   IDGLC + ++
Sbjct: 563 TYNVLIDGLCKKGKL 577



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 180/354 (50%), Gaps = 6/354 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K +  V+ LF  + + G   D + Y+  I    K+  + +G      + +    PNV  +
Sbjct: 155 KQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIY 214

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             LI GLC E RI +A  +F ++       +++TYNTLI+G C+ G    A  + + M  
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            +        PN +T++ ++ GLCK   + +A+ L  +M+     P+  TY+ L  G   
Sbjct: 275 KS------VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
            +D N A  L  +  ++G++ N  + ++++N LCK GK++ A  +L    +  +  +   
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YNT ++G+C  G +N+       MES G + +  ++N LI+ +C  KE+++A     ++ 
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KG+ P+V TYNTL  G  ++   +R  ++  +M+   V  +  +Y + I+ LC
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 182/401 (45%), Gaps = 42/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSIL---------------- 52
           P + +FN LL  L K +      SL K +   G  PD YTYSIL                
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 53  -------------------INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                              +N  CK G+V     I  +   +    + V + + + G C 
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              + +A     ++++FG  PN IT+N+LI+  C       A    K+M     E GV  
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM----AEKGVT- 453

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+  TY+ +IDG  K    D+  ++  QM+   + PNVV+Y SLI+  C      EA+ 
Sbjct: 454 -PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L +M+ +GV PN    N++++  C  GK+ +A R  D M++ ++ P   TYN L+DG C
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+   ++    + S G   D  +YN LI+GY     V + L LY  +   GIKPTV 
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           TY+ L  G  +    E   KL+ EM   ++  D   Y   I
Sbjct: 633 TYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMI 672



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 171/354 (48%), Gaps = 7/354 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+      K  D      K++   G+ P + TY+ LI+ + K+      F I
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVV++ SLI  LC + +I+EA  +   +   G  PN   YN LI+G C 
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL  F EM            P  VTY+++IDGLCK+G + +A++   Q+     
Sbjct: 539 VGKVKDALRFFDEMMRSE------ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V+TY SLI G+ +A + ++  GL   M + G++P V + + +++   K G ++   +
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEK 651

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+Q ++ P+   YN ++  +   G   +   L   M   G   D  +YN LI G+ 
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +  ++     L N +  K + P   TY+ L  G  +++    A   + EM  N+
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 178/399 (44%), Gaps = 42/399 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K    +    + K+    GL  D   Y+  +N +C++G ++   +   R+  
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN +TF SLI   C    + +A     K+   G  P+V TYNTLI+G  +      
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              + ++M     EIGV  KPN V+Y  +I+ LCK+G + +A+ +   M    + PN   
Sbjct: 475 CFQILEQME----EIGV--KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQV 528

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI G C      +A     EM+   + P +V+ NV+++ LCK GK+  A   L  + 
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQIT 588

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+  TYN+L+ G+   G +++   L+ +M+++G K    +Y+ LI+G C  + +E
Sbjct: 589 SSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIE 647

Query: 315 EALSLYNE------LPFK-----------------------------GIKPTVVTYNTLF 339
               LYNE      LP +                             GI P  +TYN+L 
Sbjct: 648 LVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G F   +      L   M+  ++A    TY   + G C
Sbjct: 708 LGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHC 746



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 41/318 (12%)

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E + V+   LF +++  G   +   Y   I    +  +  + +     M       GV  
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKR----GV-- 207

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +PN   Y+++I GLC+E  +  A+++F +M   NL  ++VTY +LI G+C   + + A  
Sbjct: 208 RPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFK 267

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-------------------DLMV 254
           +   M ++ V PN+++ N +++ LCK  KM  A  LL                   D ++
Sbjct: 268 MRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLL 327

Query: 255 QCD----------------VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           +CD                +R N +T + L++G C  GK+ + +E+       G   D+ 
Sbjct: 328 RCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEV 387

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            YN  +NGYC+  ++ +A+     +   G++P  +T+N+L     ++++ ++A +   +M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447

Query: 359 QGNDVAADTCTYRTFIDG 376
               V     TY T IDG
Sbjct: 448 AEKGVTPSVETYNTLIDG 465



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 103/210 (49%)

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           K  +LF++++      +   Y   I       +       L  M  +GV+PNV   NV++
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC+  ++ +A ++ D M   ++  +  TYNTL+DG+C  G+++   ++   M+     
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  ++N L++G CK ++++EA SL  E+   G  P   TY+ LF GL        A++L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           + +     +  +  T    ++GLC + +V 
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVE 368


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 192/371 (51%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N  +  L +N H    L +   +   G  PD++TY+ +INC  K G++     I
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             +++ R C  P+  TF +LI  L +++R+ EA  L  +L   G  P+V T+N LIN LC
Sbjct: 360 VNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 418

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   + + LF+EM +          P+ VTY+I+ID LC  G +  A +L  +M+   
Sbjct: 419 KVGDPHLGIRLFEEMKSSG------CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              + VTY ++I   C      EA+ +  +M  QG+  + V+ N +++ LCK  ++D+A+
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L++ MV+  ++PN  TYN+++  +C  G I +  ++  +M + G + D  +Y  LING 
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK    + AL L   +  KGI+PT   YN +   LF       AL LF EM       D 
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 368 CTYRTFIDGLC 378
            TY+     LC
Sbjct: 653 LTYKIVFRSLC 663



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 12/368 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN LL  L +      + S++  +   G+ PD+ T + LI   C+  QV    ++   + 
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               AP+  TFT+L++G   E  I  A  +  K+   GC P  +T N LING C+ G   
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVE 284

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL   ++      EI   F+P+ VTY+  + GLC+ G V  A ++   M  E  +P+V 
Sbjct: 285 DALGYIQQ------EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF 338

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I+      + +EAKG++ +MVD+G  P+  + N ++  L    +++ A   LDL 
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA---LDLA 395

Query: 254 VQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
            +  V+   P+ +T+N L++  C  G  +    LF  M+S GC  D+ +YNILI+  C  
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++  AL L NE+   G   + VTYNT+   L +  + E A ++F +M    ++    T+
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515

Query: 371 RTFIDGLC 378
            T IDGLC
Sbjct: 516 NTLIDGLC 523



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 188/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  L +     T + + + ++S G+ PD  T++ L+  F + G +     +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ +  +P  VT   LI G C   R+ +A     +  A G EP+ +TYNT ++GLC+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL +   M     +      P+  TY+ +I+ L K G +D+AK +  QM     
Sbjct: 315 NGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T+ +LI      N   EA  L  E+  +G+ P+V + N+++N LCK G      R
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYN L+D  C  GK+    +L   MES GC     +YN +I+  C
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +EEA  +++++  +GI  + VT+NTL  GL + ++ + A +L  +M    +  +  
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + +   C +  ++
Sbjct: 549 TYNSILTHYCKQGNIK 564



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 190/387 (49%), Gaps = 8/387 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P  ++F  L+    +    +  L +  ++   G  P   T ++LIN +CKMG+V  
Sbjct: 226 HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
                 + +   F P+ VT+ + + GLC    +  A  +   +   G +P+V TYNT+IN
Sbjct: 286 ALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L + G    A  +  +M +     G +  P+T T++ +I  L  +  +++A +L  ++ 
Sbjct: 346 CLSKNGELDEAKGIVNQMVDR----GCL--PDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L+P+V T+  LI+  C   D +    L  EM   G  P+ V+ N++++ LC  GK+ 
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           NA  LL+ M       +  TYNT++D  C   +I   +E+F  M++ G      ++N LI
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G CK K +++A  L  ++  +G++P  +TYN++     +    ++A  +   M  N   
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 365 ADTCTYRTFIDGLCV--RPQVRFTYAR 389
            D  TY T I+GLC   R QV     R
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLR 606



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 174/353 (49%), Gaps = 10/353 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN L+  L+     +  L L + L   GL PD+YT++ILIN  CK+G   LG  +
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ VT+  LI  LC+  ++  A  L  ++++ GC  + +TYNT+I+ LC+
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F +M +  G        + VT++ +IDGLCK   +D A EL  QM  E L
Sbjct: 490 KMRIEEAEEVFDQM-DAQG-----ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY S++  +C   +  +A  +L  M   G + +VV+   ++N LCK G+   A +
Sbjct: 544 QPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALK 603

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    +RP    YN ++        +     LF  M  +G   D  +Y I+    C
Sbjct: 604 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLC 663

Query: 309 K-NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE---RALKLFVE 357
           +    ++EA     E+  KG  P   ++  L  GL  +   +    A++L +E
Sbjct: 664 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 716



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N+L+    K    +  L   ++  + G  PD  TY+  ++  C+ G VS    +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+    P+V T+ ++I  L     + EA  +  ++   GC P+  T+NTLI  L  
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+L +E+T           P+  T++I+I+ LCK G       LF +MK    
Sbjct: 385 QNRLEEALDLARELTVKG------LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 438

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY  LI   C       A  LL EM   G   + V+ N I++ LCK  +++ A  
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M    +  +A T+NTL+DG C   +I+   EL   M   G + ++ +YN ++  YC
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +++A  +   +   G +  VVTY TL +GL +  + + ALKL   M+   +     
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618

Query: 369 TYRTFIDGLCVRPQVR 384
            Y   I  L  R  +R
Sbjct: 619 AYNPVIQSLFRRNNLR 634



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 38/263 (14%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F P++  Y  I+  L   G  D  + L  +M+ E      V   S +  +     +++A 
Sbjct: 85  FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144

Query: 213 GLLI--------------------------------------EMVDQGVQPNVVSSNVIM 234
            L++                                      EM  +G+QP+VV+ N ++
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC+  ++  A  +L+ M    V P+  T+ TLM GF   G I     +   M   GC 
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
               + N+LINGYCK   VE+AL    +    G +P  VTYNT  HGL +      ALK+
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 355 FVEMQGNDVAADTCTYRTFIDGL 377
              M       D  TY T I+ L
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCL 347



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 7/249 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++N ++  L K    +    +F ++++ G+     T++ LI+  CK  ++     
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++++    PN +T+ S++   C +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 534 LIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLC 593

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T VAL L + M           +P    Y+ +I  L +   +  A  LF +M    
Sbjct: 594 KAGRTQVALKLLRGMRIKG------IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647

Query: 188 LNPNVVTYTSLIHGFCH-ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P+ +TY  +    C       EA   L+EMV++G  P   S  ++   L   G  D  
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYL 707

Query: 247 SRLLDLMVQ 255
              ++L+++
Sbjct: 708 ISAIELIIE 716



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 38/234 (16%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--------------------- 221
           +  E+  P+   Y  ++     A  ++  +GL+ EM  +                     
Sbjct: 80  LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRR 139

Query: 222 -----------------GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                            GVQ + V  N ++N L +  K+     + + M    ++P+  T
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            NTL+   C   ++     +   M S G   D+ ++  L+ G+ +   +E AL +  ++ 
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             G  PT VT N L +G  ++ + E AL    +   +    D  TY TF+ GLC
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLC 313



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 4/162 (2%)

Query: 227 VVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +   + ++  L +    + A R+L+  + + D  P++  Y  ++      G  + ++ L 
Sbjct: 53  ISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLV 112

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSL-YNELPFK--GIKPTVVTYNTLFHGL 342
             M   G +         +  Y + +  ++A+ L  N+L     G++   V +N L + L
Sbjct: 113 REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVL 172

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            E  + +    ++ EM G  +  D  T  T I  LC   QVR
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVR 214


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 213/434 (49%), Gaps = 75/434 (17%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           ++S+N LL CL++    D ++SL+K +   N   +FP+L T + ++N +CK+G +++  +
Sbjct: 151 LTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARL 210

Query: 68  IFGRILRS-----------------------------CFAP--NVVTFTSLIKGLCAESR 96
            F RILR                              C  P  N V++T+LI GLC   +
Sbjct: 211 FFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGK 270

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA   + +++  GC P V TY  L+  LC +G  + AL+LF EM     E      PN
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCE------PN 324

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQ---------------------------------- 182
             TY+++ID LCKEG +D+A ++  +                                  
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384

Query: 183 -MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M+ + + PNV TY  LI GFC     + A  LL +MV+  + P+VV+ N +++ LC+ G
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D+ASRL  LM++    P+ +T+N  M   C  G++    ++  S++    K ++ +Y 
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+GYCK  ++E A SL+  +  +   P  +T+N +  GL +  + + A+ L  +M   
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 362 DVAADTCTYRTFID 375
           DV     TY   ++
Sbjct: 565 DVKPTLHTYNILVE 578



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 185/377 (49%), Gaps = 15/377 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P    VS  N++ G     K ++  L  + R+   G FP + TY++L+   C+ G+    
Sbjct: 251 PRRNAVSYTNLIHGLCEAGKLHEA-LEFWARMREDGCFPTVRTYTVLVCALCESGRELEA 309

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +FG +      PNV T+T LI  LC E R+ EA  +  ++   G  P+V+ +N LI  
Sbjct: 310 LSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFL 181
            C+ G           M +  G +G++      PN  TY+ +I G C+   +D+A  L  
Sbjct: 370 YCKRGM----------MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    L+P+VVTY +LIHG C     + A  L   M+  G  P+  + N  M  LC+ G
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           ++  A ++L+ + +  V+ N   Y  L+DG+C  GKI     LF  M +  C  +  ++N
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ++I+G  K  +V++A+ L  ++    +KPT+ TYN L   + +    +RA ++   +  +
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599

Query: 362 DVAADTCTYRTFIDGLC 378
               +  TY  FI   C
Sbjct: 600 GYQPNVVTYTAFIKAYC 616



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L ++      LSLF  +   G  P++YTY++LI+  CK G++     +
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    AP+VV F +LI   C    + +A  +   +++    PNV TYN LI G CR
Sbjct: 348 LNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  +M            P+ VTY+ +I GLC+ G VD A  LF  M  +  
Sbjct: 408 GKSMDRAMALLNKMVESK------LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  T+ + +   C      EA  +L  + ++ V+ N  +   +++  CK GK+++A+ 
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAAS 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+  +  PN+ T+N ++DG    GK+     L   M     K    +YNIL+    
Sbjct: 522 LFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVL 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + + A  + N L   G +P VVTY           + E A ++ ++++   V  D+ 
Sbjct: 582 KEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSF 641

Query: 369 TYRTFIDG 376
            Y   I+ 
Sbjct: 642 IYNLLINA 649



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 25/363 (6%)

Query: 30  VLSLFKRLNSIGLFPD----------LYTYSILINCFCKMGQVSLGFVIFGRIL----RS 75
           +L+L +R+N+     D          L +Y+ L+ C  +   V     ++  +L     S
Sbjct: 125 LLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNS 184

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
            F PN++T  +++   C    +  A   F ++      P++ TY +L+ G CR       
Sbjct: 185 VF-PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRN------ 237

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
                ++    G   V+ + N V+Y+ +I GLC+ G + +A E + +M+ +   P V TY
Sbjct: 238 ----DDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTY 293

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           T L+   C +    EA  L  EM ++G +PNV +  V+++ LCK G+MD A ++L+ MV+
Sbjct: 294 TVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVE 353

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             V P+   +N L+  +C  G +     +   MES     +  +YN LI G+C+ K ++ 
Sbjct: 354 KGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDR 413

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A++L N++    + P VVTYNTL HGL E+   + A +LF  M  +  + D  T+  F+ 
Sbjct: 414 AMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMV 473

Query: 376 GLC 378
            LC
Sbjct: 474 CLC 476



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 170/374 (45%), Gaps = 6/374 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L K    D  L +   +   G+ P +  ++ LI  +CK G +     +
Sbjct: 323 PNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGV 382

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      PNV T+  LI G C    +  A AL  K+      P+V+TYNTLI+GLC 
Sbjct: 383 LGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCE 442

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF+ M          F P+  T++  +  LC+ G V +A ++   +K +++
Sbjct: 443 VGVVDSASRLFRLMIRDG------FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   YT+LI G+C A     A  L   M+ +   PN ++ NV+++ L K GK+ +A  
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M + DV+P   TYN L++        +R  E+   + S G + +  +Y   I  YC
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +EEA  +  ++  +G+      YN L +    +   + A  +   M G        
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYL 676

Query: 369 TYRTFIDGLCVRPQ 382
           TY   +  L +   
Sbjct: 677 TYSILMKHLVIEKH 690



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 187/433 (43%), Gaps = 70/433 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L +    D+   LF+ +   G  PD +T++  + C C+MG+V     I
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N   +T+LI G C   +I  AA+LF ++ A  C PN IT+N +I+GL +
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L ++M   +       KP   TY+I+++ + KE   D+A E+  ++     
Sbjct: 548 EGKVQDAMLLVEDMAKFD------VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGY 601

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV------------------------- 223
            PNVVTYT+ I  +C      EA+ ++I++ ++GV                         
Sbjct: 602 QPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFG 661

Query: 224 ----------QPNVVSSNVIMNELC------------------KNGKMDNA--------- 246
                     +P+ ++ +++M  L                    N  +DN          
Sbjct: 662 VLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFG 721

Query: 247 --SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
             + L + M +C   PN  TY+ L++G C  G++N    L+  M   G    +  +N L+
Sbjct: 722 ITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +  CK     EA++L + +        + +Y  L  GLFE    E+A  +F  +      
Sbjct: 782 SSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYN 841

Query: 365 ADTCTYRTFIDGL 377
            D   ++  IDGL
Sbjct: 842 YDEVAWKVLIDGL 854



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 178/399 (44%), Gaps = 35/399 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    + K  D  ++L  ++    L PD+ TY+ LI+  C++G V     +
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R  F+P+  TF + +  LC   R+ EA  +   LK    + N   Y  LI+G C+
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LFK M      +     PN++T++++IDGL KEG V  A  L   M   ++
Sbjct: 513 AGKIEHAASLFKRM------LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + TY  L+       D++ A  +L  ++  G QPNVV+    +   C  G+++ A  
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++  +    V  ++F YN L++ +   G ++    +   M   GC+    +Y+IL+    
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 309 KNKEVEEALS-----------------------------LYNELPFKGIKPTVVTYNTLF 339
             K  +E  +                             L+ ++   G  P + TY+ L 
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +GL ++ +   A  L+  M+   ++     + + +   C
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 35/363 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+++  L K       + L + +    + P L+TY+IL+    K         I
Sbjct: 533 PNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEI 592

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++ S + PNVVT+T+ IK  C++ R+ EA  +  K+K  G   +   YN LIN    
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGC 652

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC-----KEGF----------- 172
            G    A  + + M       G   +P+ +TYSI++  L      KEG            
Sbjct: 653 MGLLDSAFGVLRRM------FGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 173 --VDKAK-----------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             VD               LF +M      PN+ TY+ LI+G C     N A  L   M 
Sbjct: 707 ISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G+ P+ +  N +++  CK G    A  LLD M++C    +  +Y  L+ G        
Sbjct: 767 EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKE 826

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + + +F S+   G  +D+ ++ +LI+G  K   V++   L N +   G +    TY+ L 
Sbjct: 827 KAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886

Query: 340 HGL 342
             L
Sbjct: 887 QEL 889



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 152/354 (42%), Gaps = 50/354 (14%)

Query: 29  TVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT-S 86
           T L+ F+ +     FP  L T+  L+    +   +     +   +++SC +P+  TF  +
Sbjct: 68  TALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLN 127

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L++      R+  AAA          + ++ +YN L+  L R       ++L+KEM   N
Sbjct: 128 LLR------RMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDN 181

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
           G    VF PN +T + +++  CK G +  A+  F+++      P++ TYTSL+ G+    
Sbjct: 182 G--NSVF-PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGY---- 234

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
                                          C+N  ++ A  +  +M     R NA +Y 
Sbjct: 235 -------------------------------CRNDDVERACGVFCVMP----RRNAVSYT 259

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G C  GK++   E +  M   GC     +Y +L+   C++    EALSL+ E+  +
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           G +P V TY  L   L +  + + ALK+  EM    VA     +   I   C R
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 179/338 (52%), Gaps = 6/338 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D YT   LI   C  G+ +    +   +LR    P+VVT+T L++  C  S   +A  L 
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +++  GC P+++TYN ++NG+C+ G    A+   K + +   E      PNTV+Y+I++
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE------PNTVSYNIVL 272

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            GLC     + A+EL  +M  +   PNVVT+  LI   C       A  +L ++   G  
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN +S N +++  CK  KMD A   LDLMV     P+  +YNTL+   C +G+++   EL
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              ++  GC     SYN +I+G  K  + +EAL L NE+  KG++P ++TY+T+  GL  
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
             + E A++ F ++Q   +  +T  Y   I GLC R +
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 490



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 173/334 (51%), Gaps = 6/334 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+ TY+IL+   CK         +   +      P++VT+  ++ G+C E R+ +A   
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              L ++GCEPN ++YN ++ GLC       A  L  EM    G+ G    PN VT++++
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM----GQKGC--PPNVVTFNML 306

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I  LC++G V+ A E+  Q+     +PN ++Y  L+H FC     ++A   L  MV +G 
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P++VS N ++  LC++G++D A  LL  +      P   +YNT++DG    GK     E
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M S G + D  +Y+ +  G C+   +E+A+  + ++   GI+P  V YN +  GL 
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 486

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + R+   A+ LF  M GN    +  TY   I+GL
Sbjct: 487 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 187/377 (49%), Gaps = 28/377 (7%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLF-----------PDLYTYSILINCFCKMGQVSLGFVIFG 70
           A+     T  +L K+L++ G             PD+  Y+ ++  +C  GQV        
Sbjct: 93  ARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAGQVDAAR---- 148

Query: 71  RILRSC----FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              R C       +  T  +LI+GLC   R   A A+  ++    C P+V+TY  L+   
Sbjct: 149 ---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 205

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A+ L  EM +          P+ VTY+++++G+C+EG VD A E    +   
Sbjct: 206 CKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN V+Y  ++ G C A  W +A+ L+ EM  +G  PNVV+ N++++ LC+ G ++ A
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L+ + +    PN+ +YN L+  FC   K+++       M S GC  D  SYN L+  
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C++ EV+ A+ L ++L  KG  P +++YNT+  GL +  + + AL+L  EM    +  D
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439

Query: 367 TCTYRTFIDGLCVRPQV 383
             TY T   GLC   ++
Sbjct: 440 IITYSTIAAGLCREDRI 456



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 165/334 (49%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ ILL    K   Y   + L   +   G  PD+ TY++++N  C+ G+V      
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  ++KGLC   R  +A  L  ++   GC PNV+T+N LI+ LCR
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL + +++            PN+++Y+ ++   CK+  +DKA      M     
Sbjct: 313 KGLVEPALEVLEQIPKYG------CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V+Y +L+   C + + + A  LL ++ D+G  P ++S N +++ L K GK   A  
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ MV   ++P+  TY+T+  G C   +I      F  ++ MG + +   YN +I G C
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 486

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           K +E   A+ L+  +   G  P   TY  L  GL
Sbjct: 487 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 126/245 (51%), Gaps = 8/245 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN+L+  L +    +  L + +++   G  P+  +Y+ L++ FCK  ++     
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
               ++ R C+ P++V++ +L+  LC    +  A  L  +LK  GC P +I+YNT+I+GL
Sbjct: 357 FLDLMVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G T  AL L  EM +         +P+ +TYS I  GLC+E  ++ A   F +++  
Sbjct: 416 TKAGKTKEALELLNEMVSKG------LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PN V Y ++I G C   + + A  L   M+  G  PN  +  +++  L   G +  A
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529

Query: 247 SRLLD 251
             LLD
Sbjct: 530 RDLLD 534



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 63/141 (44%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N ++  L K       L L   + S GL PD+ TYS +    C+  ++      
Sbjct: 403 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 462

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++      PN V + ++I GLC       A  LF  +   GC PN  TY  LI GL  
Sbjct: 463 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 522

Query: 129 TGHTIVALNLFKEMTNGNGEI 149
            G    A +L  E+ +   EI
Sbjct: 523 EGLIKEARDLLDELCSRGEEI 543



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 8/168 (4%)

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + +V    +P+  +   ++ +L  +G+   A R+L     C   P+   YN +M G+C  
Sbjct: 87  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL---AACG--PDVMAYNAMMAGYCGA 141

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++  +           + D ++ + LI G C       AL++ +E+  +   P VVTY
Sbjct: 142 GQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTY 198

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L     +    ++A+KL  EM+      D  TY   ++G+C   +V
Sbjct: 199 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 187/373 (50%), Gaps = 11/373 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   S+  L+  L  ++     + L + +   G+ PD+ TY  LI   C    V    
Sbjct: 90  SRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAV 149

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +  S   PNVV ++ L+ G C   R      +F ++   G EP+V+ Y  LI+ L
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  +   MT          +PN VTY+++I+ +CKEG V +A +L   M  +
Sbjct: 210 CRHGKVKKAARVMDMMTERG------LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEK 263

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG---VQPNVVSSNVIMNELCKNGKM 243
            + P+VVTY +LI G     + +EA  LL EM+ QG   V+P++++ N +++ LCK G M
Sbjct: 264 GVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWM 322

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A ++  +M +   R N   +N L+ G     K+ +  EL   M S G + D F+Y+IL
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING+CK ++VE A S  +E+  +G++P  V Y  L   + +     +A  LF EM  N  
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-C 441

Query: 364 AADTCTYRTFIDG 376
             D   Y T I G
Sbjct: 442 KLDAAAYSTMIHG 454



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 198/379 (52%), Gaps = 13/379 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLN---SIGLFPDLYTYSILINCFCKMGQV 62
           PS     S+N +L  L +    D  L L + ++    +   P+  +Y+ L+   C   + 
Sbjct: 51  PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110

Query: 63  SLGFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +    +  R ++ C   P+VVT+ +LI+GLC  + +  A  L  ++   G EPNV+ Y+ 
Sbjct: 111 AQAVGLL-RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           L++G C+TG       +F+EM+ G G      +P+ V Y+ +ID LC+ G V KA  +  
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMS-GRG-----IEPDVVMYTALIDSLCRHGKVKKAARVMD 223

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M    L PNVVTY  LI+  C      EA  L   M ++GVQP+VV+ N ++  L    
Sbjct: 224 MMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVL 283

Query: 242 KMDNASRLLDLMVQCD--VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +MD A  LL+ M+Q +  VRP+  T+N+++ G C  G + +  ++   M   GC+ +  +
Sbjct: 284 EMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVA 343

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +N+LI G  +  +V++A+ L +E+   G++P   TY+ L +G  ++RQ ERA     EM+
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403

Query: 360 GNDVAADTCTYRTFIDGLC 378
              +  +   Y   +  +C
Sbjct: 404 HQGMEPEPVHYIPLLKAMC 422



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 182/353 (51%), Gaps = 13/353 (3%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL----RSCFAPNVVTFTSLIKGLC 92
           L+++    D  +Y+ ++   C+ G +     +  R++    R    PN +++T+L++ LC
Sbjct: 47  LSALPSVRDAVSYNTVLAALCRQGCLDAALFLL-RVMSHEPRLASRPNAISYTTLMRALC 105

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           A+ R  +A  L   ++  G  P+V+TY TLI GLC       A+ L  EM     E G+ 
Sbjct: 106 ADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC----ESGI- 160

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN V YS ++ G CK G  +   ++F +M    + P+VV YT+LI   C      +A 
Sbjct: 161 -EPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            ++  M ++G++PNVV+ NV++N +CK G +  A  L   M +  V+P+  TYNTL+ G 
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279

Query: 273 CLTGKINRVKELFVSMES--MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
               +++    L   M       + D  ++N +I+G CK   + +AL +   +   G + 
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRC 339

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +V +N L  GL  + + ++A++L  EM  + +  D+ TY   I+G C   QV
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQV 392



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 182/404 (45%), Gaps = 40/404 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ LL    K   +++V  +F+ ++  G+ PD+  Y+ LI+  C+ G+V     +
Sbjct: 162 PNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARV 221

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNVVT+  LI  +C E  + EA  L   +   G +P+V+TYNTLI GL  
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
                 A+ L +EM  G   +    +P+ +T++ +I GLCK G+                
Sbjct: 282 VLEMDEAMALLEEMMQGETRV----RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337

Query: 173 -------------------VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                              V KA EL  +M    L P+  TY+ LI+GFC       A+ 
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            L EM  QG++P  V    ++  +C  G M  A  L + M + + + +A  Y+T++ G  
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAF 456

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G+    +E    M   G   D  +Y+I IN + K+ ++  A  +  ++   G  P V 
Sbjct: 457 KSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVA 516

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +++L  G       E+ L+L  EM   DVA D     T +  L
Sbjct: 517 VFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 32/239 (13%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V+Y+ ++  LC++G +D A  L   M +E   P + +                     
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHE---PRLAS--------------------- 90

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
                   +PN +S   +M  LC + +   A  LL  M  C VRP+  TY TL+ G C  
Sbjct: 91  --------RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDA 142

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
             ++   EL   M   G + +   Y+ L++GYCK    E    ++ E+  +GI+P VV Y
Sbjct: 143 ADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMY 202

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNS 394
             L   L    + ++A ++   M    +  +  TY   I+ +C    VR     RK  S
Sbjct: 203 TALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 194/371 (52%), Gaps = 6/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+     + ++   +  F+ +    L    ++   L +   K+   S  +  +  IL
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
              + P+V  F  L+  LC E +I EA  LF ++   G  P V+++NTLING C++G+  
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
               L + M         VF P+  TYS++I+GLCKEG +D A +LFL+M    L PN V
Sbjct: 278 QGFRLKRFMMENR-----VF-PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+T+LI+G C     +    +  +M+ +GV+P+V++ N ++N LCK G +  A +L+  M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            Q  ++P+ FTY  L+DG C  G +    E+   M   G + D+ ++  LI+G+C+  +V
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA     E+   GIKP   TY  + HG  +    +   KL  EMQ +       TY   
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 374 IDGLCVRPQVR 384
           ++GLC + Q++
Sbjct: 512 LNGLCKQGQMK 522



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 189/370 (51%), Gaps = 14/370 (3%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P  S   L   L K        + ++ +   G  PD+  +++L++  CK  +++   ++F
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE----PNVITYNTLING 125
           G I +    P VV+F +LI G C    + +      +LK F  E    P+V TY+ LING
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF----RLKRFMMENRVFPDVFTYSVLING 304

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G    A  LF EM +     G+V  PN VT++ +I+G C  G  D   E++ QM  
Sbjct: 305 LCKEGQLDDANKLFLEMCDR----GLV--PNDVTFTTLINGHCVTGRADLGMEIYQQMLR 358

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P+V+TY +LI+G C   D  EAK L+IEM  +G++P+  +  ++++  CK G +++
Sbjct: 359 KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +   MV+  +  +   +  L+ GFC  G++   +     M   G K DD +Y ++I+
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIH 478

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+CK  +V+    L  E+   G  P VVTYN L +GL +  Q + A  L   M    V  
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538

Query: 366 DTCTYRTFID 375
           D  TY   ++
Sbjct: 539 DDITYNILLE 548



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 181/378 (47%), Gaps = 13/378 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           +S    LL  +   K  ++  S+F   L + G       +S+L+N +   G  S     F
Sbjct: 119 LSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCF 178

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             + +        +   L   L   +    A A + ++   G  P+V  +N L++ LC+ 
Sbjct: 179 RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKE 238

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A  LF E+    G+ G+  +P  V+++ +I+G CK G +D+   L   M    + 
Sbjct: 239 HKINEAQLLFGEI----GKRGL--RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF 292

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+V TY+ LI+G C     ++A  L +EM D+G+ PN V+   ++N  C  G+ D    +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M++  V+P+  TYNTL++G C  G +   K+L + M   G K D F+Y +LI+G CK
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF---EIRQAERALKLFVEMQGNDVAAD 366
             ++E AL +  E+  +GI+   V +  L  G     ++ +AER L+   EM    +  D
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR---EMLEAGIKPD 469

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY   I G C +  V+
Sbjct: 470 DATYTMVIHGFCKKGDVK 487



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 8/203 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K         L   +   GL PD +TY++LI+  CK G +     I
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++     + V FT+LI G C E +++EA     ++   G +P+  TY  +I+G C+
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L KEM   +G +     P  VTY+++++GLCK+G +  A  L   M    +
Sbjct: 483 KGDVKTGFKLLKEM-QCDGHV-----PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEA 211
            P+ +TY  L+     A  W + 
Sbjct: 537 VPDDITYNILLERTLQA--WKQG 557


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 204/422 (48%), Gaps = 43/422 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L KN+  +   S    +   G+FPD+ TY+ LIN +C+ G +   F +  
Sbjct: 97  VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P V T+ ++I GLC   + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           + + A  +F EM +     GVV  P+ V++S +I  L K G +D+A + F  MK   L P
Sbjct: 217 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 270

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK----------- 239
           + V YT LI GFC     +EA  +  EM++QG   +VV+ N I+N LCK           
Sbjct: 271 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 330

Query: 240 ------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
                                   +G M+ A  L ++M+Q +++P+  TYNTL+DGFC  
Sbjct: 331 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 390

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            ++ +V EL+  M S     +  SY ILINGYC    V EA  L++E+  KG + T++T 
Sbjct: 391 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGN 393
           NT+  G      A +A +    M    +  D  TY T I+G      +   F    +  N
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 510

Query: 394 SG 395
           SG
Sbjct: 511 SG 512



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++NILL    +N +      +F  + S G+ PDL ++S LI    K G +      
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +  AP+ V +T LI G C    + EA  +  ++   GC  +V+TYNT++NGLC+
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EMT    E GV   P+  T++ +I+G  K+G ++KA  LF  M   NL
Sbjct: 320 EKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI GFC  ++  +   L  +M+ + + PN +S  +++N  C  G +  A R
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D MV+        T NT++ G+C  G   +  E   +M   G   D  +YN LING+ 
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++ A +L N++   G+ P V+TYN + +G     + + A  + ++M    V  D  
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 553

Query: 369 TYRTFIDG 376
           TY + I+G
Sbjct: 554 TYTSLING 561



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+G L+KN   D  L  F+ + + GL PD   Y+ILI  FC+ G +S    +
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 294

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +VVT+ +++ GLC E  + EA  LFT++   G  P+  T+ TLING  +
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF+ M   N       KP+ VTY+ +IDG CK   ++K  EL+  M    +
Sbjct: 355 DGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  LI+G+C+    +EA  L  EMV++G +  +++ N I+   C+ G    A  
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 468

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYNTL++GF     ++R   L   ME+ G   D  +YN+++NG+ 
Sbjct: 469 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 528

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +   ++EA  +  ++  +G+ P   TY +L +G       + A ++  EM
Sbjct: 529 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 578



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + +        F+ L S GL   +   + L+    K+G V L + I+  ++
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RS    NV T   +I  LC   +I    +  + ++  G  P+V+TYNTLIN  CR G   
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M+ G G      KP   TY+ II+GLCK G   +AK +  +M    ++P+  
Sbjct: 150 EAFELMDSMS-GKG-----LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  L+   C  ++  +A+ +  EM  QGV P++VS + ++  L KNG +D A +    M
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+   Y  L+ GFC  G ++   ++   M   GC  D  +YN ++NG CK K +
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ E+  +G+ P   T+ TL +G  +     +A+ LF  M   ++  D  TY T 
Sbjct: 324 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 383

Query: 374 IDGLC 378
           IDG C
Sbjct: 384 IDGFC 388



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 41/334 (12%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
             N + F  L++      ++ E    F  LK+ G   ++   N+L+ GL + G   +A  
Sbjct: 24  GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 83

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +++E+     ++      N  T +I+I+ LCK   ++  K     M+ + + P+VVTY +
Sbjct: 84  IYQEVVRSGVQV------NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI+ +C      EA  L+  M  +G++P V + N I+N LCK GK   A  +LD M++  
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197

Query: 258 VRPNAFTYNTLMDGFCL-----------------------------------TGKINRVK 282
           + P+  TYN L+   C                                     G +++  
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           + F  M++ G   D+  Y ILI G+C+N  + EAL + +E+  +G    VVTYNT+ +GL
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            + +    A +LF EM    V  D  T+ T I+G
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 93/198 (46%)

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           L + Y N   N + +  L+  +  A    E       +  +G+  ++ + N ++  L K 
Sbjct: 16  LVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 75

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D A  +   +V+  V+ N +T N +++  C   KI   K     ME  G   D  +Y
Sbjct: 76  GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 135

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LIN YC+   +EEA  L + +  KG+KP V TYN + +GL +  +  RA  +  EM  
Sbjct: 136 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 195

Query: 361 NDVAADTCTYRTFIDGLC 378
             ++ DT TY   +   C
Sbjct: 196 IGMSPDTATYNILLVECC 213



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 57/107 (53%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K ++ D   +L  ++ + GL PD+ TY++++N F + G++    +I
Sbjct: 480 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 539

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
             +++     P+  T+TSLI G   ++ + EA  +  ++   G  P+
Sbjct: 540 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 194/394 (49%), Gaps = 54/394 (13%)

Query: 29  TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
             +S + R+   G   + PDL TY ILI C C+ G++ LGF   G +++  F    +TFT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 126

Query: 86  SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            L+KGLCA+ R  +A  +   ++   GC PNV +YN L+NGLC    +  AL L   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD 186

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
             G       P+ V+Y+ +I+G  KEG  DKA   + +M    + P+VVTY+S+I   C 
Sbjct: 187 DRGGGS---PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243

Query: 205 AN----DWNEAK-GLLIE-------MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
                  W+  K G +IE       MV  GV+P++++ + +++  C  GKMD A +LL  
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI-------- 304
           MV   ++PN  TY+TL++G+C   ++     LF  MES G   D  +YNI++        
Sbjct: 304 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 363

Query: 305 ---------------------------NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                                      +G CKNK  ++AL ++  L    +K    T+N 
Sbjct: 364 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 423

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +   L ++ + + A  LFV    N +  +  TYR
Sbjct: 424 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 457



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 56/346 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S+N LL  L         L L   +      G  PD+ +Y+ +IN F K G     
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCA------------ESRIVEAAALFTKLKAFGCE 113
           +  +  +L     P+VVT++S+I  LC             E R++E+  LF  +   G +
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P++ITY+TLI+G C  G    A+ L       +G + V  KPNTVTYS +I+G CK   +
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLL------SGMVSVGLKPNTVTYSTLINGYCKISRM 329

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           + A  LF +M+   ++P+++TY  ++ G         AK L + + + G Q  + + N+I
Sbjct: 330 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 389

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV------- 286
           ++ LCKN   D+A ++   +   D++  A T+N ++D     G+ +  K+LFV       
Sbjct: 390 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 449

Query: 287 ----------------------------SMESMGCKHDDFSYNILI 304
                                       SME  GC  D    N ++
Sbjct: 450 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 495



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 41/274 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLS------------LFKRLNSIGLFPDLYTYSILINCF 56
           P V +++ ++  L K +  D   S            LF  +  IG+ PD+ TYS LI+ +
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 288

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           C  G++     +   ++     PN VT+++LI G C  SR+ +A  LF ++++ G  P++
Sbjct: 289 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 348

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------------ 152
           ITYN ++ GL +T  T  A  L+  +T    +I +                         
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408

Query: 153 -----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                 K    T++I+ID L K G  D+AK+LF+      L PN  TY  +         
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 468

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
             E   L + M D G   +    N I+ EL +  
Sbjct: 469 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRA 502



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 16/210 (7%)

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P++ TY  LI   C A   +     L  ++ +G +   ++   ++  LC + +  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 246 ASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYN 301
           A  + L  M +    PN F+YN L++G C   +     EL   M      G   D  SY 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL--------- 352
            +ING+ K  + ++A S Y+E+  +GI P VVTY+++   L + +  ++           
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260

Query: 353 ---KLFVEMQGNDVAADTCTYRTFIDGLCV 379
              KLF  M    V  D  TY T IDG C+
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCL 290


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 187/338 (55%), Gaps = 20/338 (5%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+  D+   SILIN F  + Q++  F +  +IL+  + P+ VT T+L+KGLC  + + +A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
                 + A G   + ++Y TLINGLC++G T                      P+   Y
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------------PDQFMY 104

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S+II+ LCK+  V  A +L+ +M  + + P+VVTY +LI+GFC      +A  L  EM  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           + + PNV S N++++ LCK G +     +L +M++  V+P+  T ++L+DG+ L  K N+
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + +F +M   G   D  SYNI+ING  K K V+EA+ L+ E+ FK + P  +TY+TL  
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL ++ +      L  EM+    +A+  TY + ++ LC
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLC 322



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 180/370 (48%), Gaps = 20/370 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +   LL  L  N      L     + + G   D  +Y  LIN  CK G+       
Sbjct: 43  PDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK----- 97

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                    AP+   ++ +I  LC +  +V+A  L+ ++      P+V+TYNTLI G C 
Sbjct: 98  ---------APDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCI 148

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF EM   N        PN  +++I+IDGLCKEG V   K +   M  +++
Sbjct: 149 VGQLEDAIRLFNEMRLKN------IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSV 202

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT +SLI G+      N+A+ +   M   GV  ++ S N+++N L K   +D A  
Sbjct: 203 KPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVI 262

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    + P+  TY+TL+DG    G+I+ V +L   M + G   +  +Y+ L+N  C
Sbjct: 263 LFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLC 322

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+   + A+ ++ ++  KG +P +VTYN L  GL +  + + A ++F ++       D  
Sbjct: 323 KSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVR 382

Query: 369 TYRTFIDGLC 378
            Y   I+GLC
Sbjct: 383 LYTVMINGLC 392



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 15/340 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
               P    +++++  L K+K       L+  +    +FPD+ TY+ LI  FC +GQ+  
Sbjct: 95  ETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLED 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      PNV +F  LI GLC E  +    ++   +     +P+V+T ++LI+
Sbjct: 155 AIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLID 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G         A  +F  M      I      +  +Y+I+I+GL K   VD+A  LF +M+
Sbjct: 215 GYFLVKKANKARYIFNAMAQNGVTI------DLRSYNIMINGLSKAKMVDEAVILFKEMQ 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           ++++ P+ +TY++LI G       +    L+ EM   G   NV++ + ++N LCK+G  D
Sbjct: 269 FKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFD 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A R+   +      PN  TYN L+DG C  G++   +E+F  +   G + D   Y ++I
Sbjct: 329 TAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMI 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           NG C+    +EA          G  P  VTY  +   LF+
Sbjct: 389 NGLCREALFDEAY---------GCTPNAVTYEIIIRALFK 419



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 14/202 (6%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   +  +++  + LI+ F H    N A  +L +++  G QP+ V+   ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A    D ++    R +  +Y TL++G C +G+                  D F Y++
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK--------------APDQFMYSM 106

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +IN  CK+K V +A  LY E+  K I P VVTYNTL +G   + Q E A++LF EM+  +
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           +  + C++   IDGLC    V+
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVK 188


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + LL  L K +H+   + LF  + ++G+ PD+Y Y+ +I   C++  +S    +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +    N+V +  LI GLC + ++ EA  +   L     +P+V+TY TL+ GLC+
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                V L +  EM      + + F P+    S +++GL K G V++A  L  ++    +
Sbjct: 310 VQEFEVGLEMIDEM------LRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGV 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN+  Y +LI   C   +++EA+ L   M   G+ PN V+ +++++  C+ GK+D A  
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALS 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   ++P+ + YN+L++G C  G I+  + L   M +   +    +Y  L+ GYC
Sbjct: 424 FLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYC 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++ +AL LY+E+  KGI P++ T+ TL  GLF       A+KLF EM   +V  +  
Sbjct: 484 SKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRV 543

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 544 TYNVMIEGYC 553



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 190/370 (51%), Gaps = 10/370 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  +N+L+  L K +     + + K L    L PD+ TY  L+   CK+ +  +G  +  
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +LR  F+P+    +SL++GL    ++ EA  L  ++  FG  PN+  YN LI+ LC+  
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  LF  M    G+IG+   PN VTYSI+ID  C+ G +D A     +M    L P
Sbjct: 382 NFDEAELLFDRM----GKIGLC--PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V  Y SLI+G C   D + A+ L+ EM+++ ++P VV+   +M   C  GK++ A RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+ +T+ TL+ G    G I    +LF  M     K +  +YN++I GYC+ 
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTC 368
             + +A    NE+  KGI P   +Y  L HGL    QA  A K+FV+   +GN    + C
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC 614

Query: 369 TYRTFIDGLC 378
            Y   + G C
Sbjct: 615 -YTGLLHGFC 623



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 190/371 (51%), Gaps = 9/371 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PS   VSS   L+  L K    +  L+L KR+   G+ P+++ Y+ LI+  CK       
Sbjct: 330 PSEAAVSS---LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA 386

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++F R+ +    PN VT++ LI   C   ++  A +   ++   G +P+V  YN+LING
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A +L  EM N         +P  VTY+ ++ G C +G ++KA  L+ +M  
Sbjct: 447 HCKFGDISAAESLMAEMINKK------LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P++ T+T+L+ G   A    +A  L  EM +  V+PN V+ NV++   C+ G M  
Sbjct: 501 KGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSK 560

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A   L+ M++  + P+ ++Y  L+ G CLTG+ +  K     +    C+ ++  Y  L++
Sbjct: 561 AFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C+  ++EEALS+  ++  +G+   +V Y  L  G  + +  +  L L  EM    +  
Sbjct: 621 GFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKP 680

Query: 366 DTCTYRTFIDG 376
           D   Y + ID 
Sbjct: 681 DDVIYTSMIDA 691



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L K +++D    LF R+  IGL P+  TYSILI+ FC+ G++      
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++     P+V  + SLI G C    I  A +L  ++     EP V+TY +L+ G C 
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L+ EMT G G +     P+  T++ ++ GL + G +  A +LF +M   N+
Sbjct: 485 KGKINKALRLYHEMT-GKGIV-----PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY  +I G+C   + ++A   L EM+++G+ P+  S   +++ LC  G+   A  
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +D + + +   N   Y  L+ GFC  GK+     +   M   G   D   Y +LI+G  
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K+ +  L L  E+  +G+KP  V Y ++     +    + A  ++  M       +  
Sbjct: 659 KHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 719 TYTAVINGLC 728



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 182/387 (47%), Gaps = 25/387 (6%)

Query: 10  PVSSFNILLGCLAKNK------------HY-------DTVLSLFKRLNSIGLFPDLYTYS 50
           P   F+ L  C  K K            HY       D VL     +  + L P++ T S
Sbjct: 137 PSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLS 196

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            L++   K     L   +F  ++     P+V  +T +I+ LC    +  A  +  +++A 
Sbjct: 197 ALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEAT 256

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           GC+ N++ YN LI+GLC+      A+ + K++       G   KP+ VTY  ++ GLCK 
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKELKPDVVTYCTLVCGLCKV 310

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              +   E+  +M     +P+    +SL+ G        EA  L+  + + GV PN+   
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N +++ LCK    D A  L D M +  + PN  TY+ L+D FC  GK++        M  
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           MG K   + YN LING+CK  ++  A SL  E+  K ++PTVVTY +L  G     +  +
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGL 377
           AL+L+ EM G  +     T+ T + GL
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGL 517



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 194/447 (43%), Gaps = 78/447 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL+    +    DT LS    +  +GL P +Y Y+ LIN  CK G +S    +
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL 459

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P VVT+TSL+ G C++ +I +A  L+ ++   G  P++ T+ TL++GL R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF EM   N       KPN VTY+++I+G C+EG + KA E   +M  + +
Sbjct: 520 AGLIRDAVKLFTEMAEWN------VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573

Query: 189 NP-----------------------------------NVVTYTSLIHGFCHANDWNEAK- 212
            P                                   N + YT L+HGFC      EA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 213 ----------------------------------GLLIEMVDQGVQPNVVSSNVIMNELC 238
                                             GLL EM D+G++P+ V    +++   
Sbjct: 634 VCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G    A  + DLM+     PN  TY  +++G C  G +N  + L   M       +  
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV 753

Query: 299 SYNILINGYCKN-KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           +Y   ++   K   ++++A+ L+N +  KG+     TYN L  G     + E A +L   
Sbjct: 754 TYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELITR 812

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           M G+ V+ D  TY T I  LC R  V+
Sbjct: 813 MIGDGVSPDCITYTTMISELCRRNDVK 839



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 179/405 (44%), Gaps = 49/405 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  LL  L +       + LF  +    + P+  TY+++I  +C+ G +S  F  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+  ++  LI GLC   +  EA      L    CE N I Y  L++G CR
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL----QMK 184
            G    AL++ ++M    G  GV    + V Y ++IDG  K     K +++FL    +M 
Sbjct: 625 EGKLEEALSVCQDM----GLRGVDL--DLVCYGVLIDGSLKH----KDRKVFLGLLKEMH 674

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              L P+ V YTS+I       D+ EA G+   M+++G  PN V+   ++N LCK G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 245 NASRLLDLMVQCDVRPNAFTY-----------------------------------NTLM 269
            A  L   M   +  PN  TY                                   N L+
Sbjct: 735 EAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLI 794

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            GFC  G++    EL   M   G   D  +Y  +I+  C+  +V++A+ L+N +  KGI+
Sbjct: 795 RGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIR 854

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           P  V YNTL HG     +  +A +L  EM    +  +T T  T I
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 41/257 (15%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + +L+    K+K     L L K ++  GL PD   Y+ +I+   K G     F I+  ++
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK---------AFGC------------ 112
                PN VT+T++I GLC    + EA  L +K++          +GC            
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDM 769

Query: 113 --------------EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
                           N  TYN LI G CR G    A  L   M      IG    P+ +
Sbjct: 770 KKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRM------IGDGVSPDCI 823

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+ +I  LC+   V KA EL+  M  + + P+ V Y +LIHG C A +  +A  L  EM
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 219 VDQGVQPNVVSSNVIMN 235
           + QG++PN  +S   ++
Sbjct: 884 LRQGLKPNTETSETTIS 900



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 5/265 (1%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           ++ LI    R+   +  + +FK M        V   P   T S ++ GL K      A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTK-----VSLLPEVRTLSALLHGLVKFRHFGLAME 213

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF  M    + P+V  YT +I   C   D + AK ++++M   G   N+V  NV+++ LC
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K+  A  +   +   +++P+  TY TL+ G C   +     E+   M  +     + 
Sbjct: 274 KKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           + + L+ G  K  +VEEAL+L   +   G+ P +  YN L   L + R  + A  LF  M
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
               +  +  TY   ID  C R ++
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKL 418



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 51/113 (45%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++N+L+    +    +    L  R+   G+ PD  TY+ +I+  C+   V     ++  
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +      P+ V + +LI G C    + +A  L  ++   G +PN  T  T I+
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 194/379 (51%), Gaps = 10/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           +R M P P  V+ +N ++            L + + +   G + P+ YTY  +I+ +CK+
Sbjct: 511 LRQM-PRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 60  GQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G+V     +F  +L +    P  V + +LI G C + ++  A     ++   G    V T
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L++ L   G    A  L +EM  G G       P+  TY+I+I+G CKEG V KA E
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEM-GGKG-----LAPDVFTYNILINGHCKEGNVKKALE 682

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M    +   VVTYT+LI+         E   L  E V +G++P++V  N ++N   
Sbjct: 683 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 742

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +G +D A  ++  M +  + P+  TYNTLM G CL G+++  ++L   M   G + D  
Sbjct: 743 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 802

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+GY    +V++AL + NE+  KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 803 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 862

Query: 359 QGNDVAADTCTYRTFIDGL 377
             N +  D  TY + I+GL
Sbjct: 863 VENGITPDDSTYISLIEGL 881



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 175/370 (47%), Gaps = 12/370 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     I  
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 71  RIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCR 128
            +  R   APN  T+ ++I G C   R+ EA  +F ++   G  +P  + YN LI G C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL     M     E GV       TY++++  L  +G   +A EL  +M  + L
Sbjct: 604 QGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY  LI+G C   +  +A  +   M  +GV+  VV+   ++  L K G++    +
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D  V+  +RP+   YN L++    +G I+R  E+   ME      DD +YN L+ G C
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 777

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               V+EA  L +E+  +GI+P +VTYNTL  G       + AL++  EM          
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 838 TYNALIQGLC 847



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 183/407 (44%), Gaps = 41/407 (10%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSI----------------------GLFPDLY 47
           P S  N+LL   A  + + T L L+ R+ S+                       LF D++
Sbjct: 421 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMF 480

Query: 48  ---------TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                    T++I++   C  G+ +        +LR    PN VT+ ++I G C+  R+ 
Sbjct: 481 RLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQ 536

Query: 99  EAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            A  +  +++  G   PN  TY T+I+G C+ G    A+ +F EM    GE+    KP  
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV----KPEA 591

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+ +I G C +G +D A     +M    +   V TY  L+H         EA  L+ E
Sbjct: 592 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 651

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G+ P+V + N+++N  CK G +  A  + + M +  VR    TY  L+      G+
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +    +LF      G + D   YN LIN +  +  ++ A  +  E+  K I P  VTYNT
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 771

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L  GL  + + + A KL  EM    +  D  TY T I G  ++  V+
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 30/342 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           MR      P   ++  ++    K    D  + +F  + + G + P+   Y+ LI  +C  
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G++    +   R++    A  V T+  L+  L  + R  EA  L  ++   G  P+V TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV--------------------------- 152
           N LING C+ G+   AL +F+ M+       VV                           
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 153 --FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
              +P+ V Y+ +I+     G +D+A E+  +M+ + + P+ VTY +L+ G C     +E
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ L+ EM ++G+QP++V+ N +++     G + +A R+ + M+     P   TYN L+ 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           G C  G+ +  + +   M   G   DD +Y  LI G     E
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T T++I++  LC  G   +A EL  QM      PN VTY ++I GFC       A  ++ 
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 217 EMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCL 274
           EM ++G + PN  +   +++  CK G++D A ++ D ++ + +V+P A  YN L+ G+C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK++        M   G      +YN+L++    +    EA  L  E+  KG+ P V T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           YN L +G  +    ++AL++F  M    V A   TY   I  L  + QV+     F  A 
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 390 RKG 392
           R+G
Sbjct: 724 RRG 726


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 204/422 (48%), Gaps = 43/422 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L KN+  +   S    +   G+FPD+ TY+ LIN +C+ G +   F +  
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 313

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P V T+ ++I GLC   + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 373

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           + + A  +F EM +     GVV  P+ V++S +I  L K G +D+A + F  MK   L P
Sbjct: 374 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 427

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK----------- 239
           + V YT LI GFC     +EA  +  EM++QG   +VV+ N I+N LCK           
Sbjct: 428 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 487

Query: 240 ------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
                                   +G M+ A  L ++M+Q +++P+  TYNTL+DGFC  
Sbjct: 488 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 547

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            ++ +V EL+  M S     +  SY ILINGYC    V EA  L++E+  KG + T++T 
Sbjct: 548 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGN 393
           NT+  G      A +A +    M    +  D  TY T I+G      +   F    +  N
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 667

Query: 394 SG 395
           SG
Sbjct: 668 SG 669



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++NILL    +N +      +F  + S G+ PDL ++S LI    K G +      
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +  AP+ V +T LI G C    + EA  +  ++   GC  +V+TYNT++NGLC+
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EMT    E GV   P+  T++ +I+G  K+G ++KA  LF  M   NL
Sbjct: 477 EKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI GFC  ++  +   L  +M+ + + PN +S  +++N  C  G +  A R
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D MV+        T NT++ G+C  G   +  E   +M   G   D  +YN LING+ 
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++ A +L N++   G+ P V+TYN + +G     + + A  + ++M    V  D  
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 710

Query: 369 TYRTFIDG 376
           TY + I+G
Sbjct: 711 TYTSLING 718



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+G L+KN   D  L  F+ + + GL PD   Y+ILI  FC+ G +S    +
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +VVT+ +++ GLC E  + EA  LFT++   G  P+  T+ TLING  +
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF+ M   N       KP+ VTY+ +IDG CK   ++K  EL+  M    +
Sbjct: 512 DGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN ++Y  LI+G+C+    +EA  L  EMV++G +  +++ N I+   C+ G    A  
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYNTL++GF     ++R   L   ME+ G   D  +YN+++NG+ 
Sbjct: 626 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +   ++EA  +  ++  +G+ P   TY +L +G       + A ++  EM
Sbjct: 686 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + +        F+ L S GL   +   + L+    K+G V L + I+  ++
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RS    NV T   +I  LC   +I    +  + ++  G  P+V+TYNTLIN  CR G   
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M+ G G      KP   TY+ II+GLCK G   +AK +  +M    ++P+  
Sbjct: 307 EAFELMDSMS-GKG-----LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  L+   C  ++  +A+ +  EM  QGV P++VS + ++  L KNG +D A +    M
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+   Y  L+ GFC  G ++   ++   M   GC  D  +YN ++NG CK K +
Sbjct: 421 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 480

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ E+  +G+ P   T+ TL +G  +     +A+ LF  M   ++  D  TY T 
Sbjct: 481 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 540

Query: 374 IDGLC 378
           IDG C
Sbjct: 541 IDGFC 545



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 41/334 (12%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
             N + F  L++      ++ E    F  LK+ G   ++   N+L+ GL + G   +A  
Sbjct: 181 GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 240

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +++E+     ++      N  T +I+I+ LCK   ++  K     M+ + + P+VVTY +
Sbjct: 241 IYQEVVRSGVQV------NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI+ +C      EA  L+  M  +G++P V + N I+N LCK GK   A  +LD M++  
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354

Query: 258 VRPNAFTYNTLMDGFCL-----------------------------------TGKINRVK 282
           + P+  TYN L+   C                                     G +++  
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           + F  M++ G   D+  Y ILI G+C+N  + EAL + +E+  +G    VVTYNT+ +GL
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            + +    A +LF EM    V  D  T+ T I+G
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 15/331 (4%)

Query: 62  VSLGFVIFGRILRSC--FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           + LG      I  +C  F  ++ +F+++I  L    R+ +A A+  ++        V   
Sbjct: 111 LQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIV 170

Query: 120 NTLINGLCRTGHTIVALNLF-------KEMTNGNGEIGVVFKPNTVTYSI-----IIDGL 167
            +L+      G   +  +L        +++  G  E   V K   +  SI     ++ GL
Sbjct: 171 ESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG-CEAFRVLKSKGLCVSINACNSLLGGL 229

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            K G+VD A E++ ++    +  NV T   +I+  C        K  L +M ++GV P+V
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++N  C+ G ++ A  L+D M    ++P  FTYN +++G C TGK  R K +   
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M  +G   D  +YNIL+   C+N  + +A  +++E+P +G+ P +V+++ L   L +   
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++ALK F +M+   +A D   Y   I G C
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFC 440



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 57/107 (53%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K ++ D   +L  ++ + GL PD+ TY++++N F + G++    +I
Sbjct: 637 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 696

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
             +++     P+  T+TSLI G   ++ + EA  +  ++   G  P+
Sbjct: 697 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 202/382 (52%), Gaps = 19/382 (4%)

Query: 3   HMHPSPPPV---SSFNILLGCLAKN---KHYDTVLSLFKRLNSIGLFPDLYTYSILINCF 56
           HM+   PP    +++N L+  L +    +H    LSL  R    G  PD +T++ LI  +
Sbjct: 118 HMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVR---SGWRPDAFTFNSLILGY 174

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           C+  Q+ +   +F ++    F+ + V++ +LI+G C   RI EA  LF ++     +P++
Sbjct: 175 CRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDM 230

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            T+  L+ GLC  G     L + ++M     E+G  ++P T  Y+ ++D  C+E   ++A
Sbjct: 231 YTHAALVKGLCDAGRGEEGLCMLQKMK----ELG--WRPTTRAYAALVDLWCREQKAEEA 284

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +++  +M    L P VVT T +++ +C     + A  +   M  +G +PNV + N I+  
Sbjct: 285 EKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG 344

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            C  GK+  A  LLD M +C V P+  TYN L+ G C+ G I     L   ME  G   D
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN+LI+  CK  +V+EA SL++ L ++GI+P  VT+NT+ +GL +  + + A     
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M     A DT TY  FI+ LC
Sbjct: 465 NMISAGYAPDTYTYSPFIENLC 486



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 178/369 (48%), Gaps = 10/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+    + +  +    LF ++   G   D  +Y+ LI  FC+ G++     +
Sbjct: 162 PDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALEL 221

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F    R    P++ T  +L+KGLC   R  E   +  K+K  G  P    Y  L++  CR
Sbjct: 222 F----REMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCR 277

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  EM +          P  VT +I+++  C+EG +  A  +F  M+++  
Sbjct: 278 EQKAEEAEKILNEMFDSG------LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY +++ GFC+A    +A  LL +M + GV+P+VV+ N+++   C +G + +A R
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL LM    +  + +TYN L+D  C TGK++    LF  +E  G + +  ++N +ING C
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + + A +    +   G  P   TY+     L + + ++  L    EM   DV   T 
Sbjct: 452 KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511

Query: 369 TYRTFIDGL 377
            Y   I+ L
Sbjct: 512 NYTIVINRL 520



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 170/352 (48%), Gaps = 6/352 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    + +  +    +   +   GL P + T +I++N +C+ G++S    +
Sbjct: 263 PTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRV 322

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNV T+ ++++G C   ++ +A AL  +++  G EP+V+TYN LI G C 
Sbjct: 323 FESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   A  L + M  GNG        +  TY+++ID LCK G VD+A  LF  ++Y  +
Sbjct: 383 DGHIGSAFRLLRLM-EGNG-----LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VT+ ++I+G C A  ++ A   L  M+  G  P+  + +  +  LCK         
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF 496

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +D M+Q DV+P+   Y  +++             ++  M S GC  D  +Y   +  YC
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYC 556

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
               ++EA ++  E+         + YNTL  G   I Q +RA+ +   M G
Sbjct: 557 NEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTG 608



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 176/420 (41%), Gaps = 57/420 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+     + H  +   L + +   GL  D YTY++LI+  CK G+V     +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTF ++I GLC   +   A      + + G  P+  TY+  I  LC+
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T  +   L    EM   +       KP+TV Y+I+I+ L  E     A  ++ QM  +  
Sbjct: 488 TKGSQEGLFFIDEMLQKD------VKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTYT+ +  +C+    +EA+ ++ EM       + ++ N +++     G+ D A  
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVT 601

Query: 249 LLDLMVQCDVRPNAFT-------------------------------------------- 264
           +L  M      PN FT                                            
Sbjct: 602 ILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNS 661

Query: 265 -------YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
                  Y ++++GF    +++ V  L   M+      ++  YN L+N +CK +   +A 
Sbjct: 662 VPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAW 721

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L   +   G  P ++ Y  L  GL    QA+RA ++F   +  +   D   ++  IDG 
Sbjct: 722 ALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGF 781



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 10/266 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P   TYN LI  LCR      A      M          ++P+  T++ +I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSG------WRPDAFTFNSLILGYCRTQQL 180

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           + A +LF +M +   + + V+Y +LI GFC A   +EA  L  EM     QP++ +   +
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAAL 236

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  LC  G+ +    +L  M +   RP    Y  L+D +C   K    +++   M   G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                +  I++N YC+   +  A+ ++  + FKG +P V TYN +  G     +  +A+ 
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
           L  +M+   V  D  TY   I G C+
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCI 382



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 156/385 (40%), Gaps = 57/385 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGF 66
           P   +FN ++  L K   +D   +  + + S G  PD YTYS  I   CK    Q  L F
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFF 497

Query: 67  V---------------------------------IFGRILRSCFAPNVVTFTSLIKGLCA 93
           +                                 I+G+++    +P+VVT+T+ ++  C 
Sbjct: 498 IDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCN 557

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R+ EA  + T++K      + + YNTLI+G    G T  A+ + K MT      GV  
Sbjct: 558 EGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT------GVAS 611

Query: 154 KPNTVTYSII----------------IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
            PN  T+ I+                   + K   +    ELF  MK  ++  +  TY S
Sbjct: 612 MPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLS 671

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           ++ GF      +E   L+  M ++ +  N    N ++N  CK     +A  LL  M+   
Sbjct: 672 ILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHG 731

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             PN   Y  L+ G    G+ +R KE+F S        D+  + ++I+G+ +    +   
Sbjct: 732 FLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCH 791

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGL 342
            + + L     KP+  TY  L   L
Sbjct: 792 DMISMLEQMKCKPSDETYAMLTEEL 816



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 6/160 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++  +L   ++ +  D V SL   +    L  +   Y+ L+NCFCK+   S  + 
Sbjct: 663 PSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++   F PN++ +  L+ GL AE +   A  +F   +      + I +  +I+G  
Sbjct: 723 LLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFI 782

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           R GH  +  ++   +        +  KP+  TY+++ + L
Sbjct: 783 RKGHADMCHDMISMLEQ------MKCKPSDETYAMLTEEL 816


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 185/341 (54%), Gaps = 9/341 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  + + +  D V  L+K ++ +G+ PD+YTY  LI  FC+ G++     +
Sbjct: 218 PTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   PN V FT+LI   C E  +     L+  ++  G  P+++ YN L+NGLCR
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCR 337

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A ++ +EM N         KP+ VTY+ +IDG CK+G +D A ++  +M  + +
Sbjct: 338 ARNLKAAESIVEEMKNAG------LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEV 391

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + + VTYT+LI G   A    +A+ +L EM++  ++P+  +  ++++  C+ G +    +
Sbjct: 392 SLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFK 451

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M     +P   TYN +M+G C  G++     L  +M ++G   DD +YNIL++G C
Sbjct: 452 LLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           K+ +V  +  L +    KG+ P    Y +L   L + + A+
Sbjct: 512 KHGKVANSEELESS---KGMVPDFAVYTSLISELAKKKPAK 549



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 192/371 (51%), Gaps = 12/371 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV S     G +++        + + +L   G+ P+   +++L+  F ++G++     
Sbjct: 153 PAPVCS-----GLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARK 207

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + RS   P VVTF +LI G+C    +     L+ ++   G +P+V TY  LI G C
Sbjct: 208 VFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           RTG    A+ +F EM +     GV   PN V ++ +ID  CKEG V+   +L+  M+   
Sbjct: 267 RTGRMENAVKMFNEMRD----TGV--NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++V Y +L++G C A +   A+ ++ EM + G++P+ V+   +++  CK+GK+D A 
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   M + +V  +  TY  L+ G    G+    + +   M     + D+ +Y ++I+ +
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  +V+    L  E+  KG KP VVTYN + +GL ++ Q + A  L   M    V+ D 
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500

Query: 368 CTYRTFIDGLC 378
            TY   +DG C
Sbjct: 501 ITYNILLDGQC 511


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 194/379 (51%), Gaps = 10/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           +R M P P  V+ +N ++            L + + +   G + P+ YTY  +I+ +CK+
Sbjct: 506 LRQM-PRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 60  GQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G+V     +F  +L +    P  V + +LI G C + ++  A     ++   G    V T
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L++ L   G    A  L +EM  G G       P+  TY+I+I+G CKEG V KA E
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEM-GGKG-----LAPDVFTYNILINGHCKEGNVKKALE 677

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M    +   VVTYT+LI+         E   L  E V +G++P++V  N ++N   
Sbjct: 678 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 737

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +G +D A  ++  M +  + P+  TYNTLM G CL G+++  ++L   M   G + D  
Sbjct: 738 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 797

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+GY    +V++AL + NE+  KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 798 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 857

Query: 359 QGNDVAADTCTYRTFIDGL 377
             N +  D  TY + I+GL
Sbjct: 858 VENGITPDDSTYISLIEGL 876



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 175/370 (47%), Gaps = 12/370 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     I  
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 71  RIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCR 128
            +  R   APN  T+ ++I G C   R+ EA  +F ++   G  +P  + YN LI G C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL     M     E GV       TY++++  L  +G   +A EL  +M  + L
Sbjct: 599 QGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY  LI+G C   +  +A  +   M  +GV+  VV+   ++  L K G++    +
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D  V+  +RP+   YN L++    +G I+R  E+   ME      DD +YN L+ G C
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               V+EA  L +E+  +GI+P +VTYNTL  G       + AL++  EM          
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 833 TYNALIQGLC 842



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 183/407 (44%), Gaps = 41/407 (10%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSI----------------------GLFPDLY 47
           P S  N+LL   A  + + T L L+ R+ S+                       LF D++
Sbjct: 416 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMF 475

Query: 48  ---------TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                    T++I++   C  G+ +        +LR    PN VT+ ++I G C+  R+ 
Sbjct: 476 RLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQ 531

Query: 99  EAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            A  +  +++  G   PN  TY T+I+G C+ G    A+ +F EM    GE+    KP  
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV----KPEA 586

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+ +I G C +G +D A     +M    +   V TY  L+H         EA  L+ E
Sbjct: 587 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 646

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G+ P+V + N+++N  CK G +  A  + + M +  VR    TY  L+      G+
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +    +LF      G + D   YN LIN +  +  ++ A  +  E+  K I P  VTYNT
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 766

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L  GL  + + + A KL  EM    +  D  TY T I G  ++  V+
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 30/342 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           MR      P   ++  ++    K    D  + +F  + + G + P+   Y+ LI  +C  
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G++    +   R++    A  V T+  L+  L  + R  EA  L  ++   G  P+V TY
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV--------------------------- 152
           N LING C+ G+   AL +F+ M+       VV                           
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 153 --FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
              +P+ V Y+ +I+     G +D+A E+  +M+ + + P+ VTY +L+ G C     +E
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ L+ EM ++G+QP++V+ N +++     G + +A R+ + M+     P   TYN L+ 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           G C  G+ +  + +   M   G   DD +Y  LI G     E
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T T++I++  LC  G   +A EL  QM      PN VTY ++I GFC       A  ++ 
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 217 EMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCL 274
           EM ++G + PN  +   +++  CK G++D A ++ D ++ + +V+P A  YN L+ G+C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK++        M   G      +YN+L++    +    EA  L  E+  KG+ P V T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           YN L +G  +    ++AL++F  M    V A   TY   I  L  + QV+     F  A 
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 390 RKG 392
           R+G
Sbjct: 719 RRG 721


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+  ++  LA +K  D    LF++L + G  P++  Y+ +I+   K G++  G   F 
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P   T+T +I GLC    + +A  +F ++   GC P+ ITY TLI+G  +  
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L   M     E      P  VTY  I+ G CK   +++AKE+  QM+     P
Sbjct: 483 KMDEARKLLDVMLTKGPE------PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 536

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            +  +TSL+  +       EA  +L EM  +G  P+V+    +++ L   G++  A  + 
Sbjct: 537 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 596

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++    P+A TY T++  F   G +    E+   M   G   D F+YN L++GY K 
Sbjct: 597 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 656

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCT 369
           + V++A  +Y+ +   GIKP  VT+N L HGLF+  + +RA  LF EM + ++V     +
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVS 716

Query: 370 YRTFIDGL 377
           Y   IDGL
Sbjct: 717 YTILIDGL 724



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 17/380 (4%)

Query: 1   MRHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ MH +   P V + NI+L  L K +  D  + LF  + S+G  P + +Y+ +I+    
Sbjct: 8   LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVI 117
           + ++   +  F  ++ +   P+V+ FT+LI G C   +      L  + LK F   P+V 
Sbjct: 68  IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--RPDVF 125

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            Y ++I+G C+ G       + +EM       G +  P+   Y ++ID LCK G VD+A 
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAA----GCI--PDAAAYFVLIDPLCKLGRVDEAY 179

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M+      + VT+ +LI    +    +EA  L  EM+++G +P +   + ++  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK GK+D A+ +   +V   V  +   YN+LMDG+C  G+++   +L + M       D 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YNIL+ G+ +   +++AL L+  L   G KP   TY T+  GL++ ++ E A   F  
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF-- 357

Query: 358 MQGNDVAADTCTYRTFIDGL 377
               D A D  +Y T I GL
Sbjct: 358 ----DEALDVISYTTVIKGL 373



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 175/401 (43%), Gaps = 47/401 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   + L+  L K    D    +++ + +  +      Y+ L++ +CK+G+V  G  +
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKL 286

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++ T+  L+ G    +R+ +A  LF  L ++GC+PN  TY T+I GL  
Sbjct: 287 LLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD 346

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   F E  +             ++Y+ +I GL     +D+A ELF ++K    
Sbjct: 347 AQRMEEAKAFFDEALD------------VISYTTVIKGLADSKRIDEACELFEKLKTAGC 394

Query: 189 NPNVVTYTS-----------------------------------LIHGFCHANDWNEAKG 213
           +PNVV YT+                                   +I G C A    +A  
Sbjct: 395 SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 454

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +  +MV +G  P+ ++   +++   K  KMD A +LLD+M+     P A TY +++ GFC
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               IN  KE+   M   GC+   F +  L++ Y      EEA  +  E+  +G  P V+
Sbjct: 515 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 574

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            Y +L   LF   +   A  +F  M     A D  TY T I
Sbjct: 575 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 171/373 (45%), Gaps = 13/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+   +K    D    L   + + G  P   TY  +++ FCK+  ++    +
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 525

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P +  FTSL+    ++ R  EA  + T++ A GC P+VI Y +LI+ L  
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A ++F  M     E G    P+ +TY  II    K G V+ A E+   M    +
Sbjct: 586 TGRVPEARHVFDSMI----EKGCA--PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 639

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y SL+ G+      ++A G+   MV  G++PN V+ NV+M+ L K+GK D A  
Sbjct: 640 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 699

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNILI 304
           L   M++ D V P   +Y  L+DG    GK  RV E F   + M   G   +  +Y  LI
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGL---GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   + EA  L  ++   G+ P V  Y+ L  GL +    + A  +F EM     A
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816

Query: 365 ADTCTYRTFIDGL 377
            +  TY+    G 
Sbjct: 817 PNEVTYKVLRRGF 829



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++ +++  L K +       +F+++   G  PD  TY+ LI+ F K  ++     +
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P  VT+ S++ G C    I EA  +  +++  GCEP +  + +L++    
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  EMT           P+ + Y+ +ID L   G V +A+ +F  M  +  
Sbjct: 551 KGRAEEAYQVLTEMTARG------CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY ++I  F    +   A  +L  M   GV P+  + N +M+   K  ++D A  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGY 307
           + D MV   ++PNA T+N LM G    GK +R   LF  M E         SY ILI+G 
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   V EA S + E+  +GI P   TY +L + L +  +   A KL  +M    V  D 
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784

Query: 368 CTYRTFIDGL 377
             Y   I GL
Sbjct: 785 QAYSALITGL 794



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 181/367 (49%), Gaps = 7/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K    +  L  F+ ++     P   TY+++I+  CK   +     +
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++++    P+ +T+T+LI G    S++ EA  L   +   G EP  +TY ++++G C+
Sbjct: 456 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  +M     E G+    + ++Y +       +G  ++A ++  +M     
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL------SKGRAEEAYQVLTEMTARGC 569

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+ YTSLI          EA+ +   M+++G  P+ ++   I+    K G ++ A  
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+LM +  V P+ F YN+LMDG+    ++++   ++  M + G K +  ++N+L++G  
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689

Query: 309 KNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K+ + + A SL+ E+  K  + PT+V+Y  L  GL +  +   A   F EM    +  + 
Sbjct: 690 KDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPEC 749

Query: 368 CTYRTFI 374
            TY + I
Sbjct: 750 HTYTSLI 756



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 175/399 (43%), Gaps = 35/399 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++    K    DT   + + + + G  PD   Y +LI+  CK+G+V   + +
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ +S    + VTF +LI+ L    ++ EA  L+ ++   G EP +   ++LI  LC+
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 129 TG---------HTIVALNL------FKEMTNGNGEIGVVFK--------------PNTVT 159
            G          T+VA  +      +  + +G  ++G V                P+  T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I++ G  +   +D A ELF  +      PN  TYT++I G   A    EAK    E +
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL 361

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D      V+S   ++  L  + ++D A  L + +      PN   Y  ++DG    G+I 
Sbjct: 362 D------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIE 415

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              + F  M    C     +Y ++I+G CK + + +A  ++ ++  KG  P  +TY TL 
Sbjct: 416 DGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLI 475

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +  + + A KL   M          TY + + G C
Sbjct: 476 DGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 11/288 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+  L           +F  +   G  PD  TY  +I  F K+G V     I
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +S   P+   + SL+ G     R+ +A  ++ ++ A G +PN +T+N L++GL +
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A +LFKEM   +        P  V+Y+I+IDGL K G V +A   F +M    +
Sbjct: 691 DGKTDRAFSLFKEMLEKDE-----VPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TYTSLI+    A    EAK L+ +MV  GV P+V + + ++  L  +  +D A  
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK---INRVKELF---VSMES 290
           +   M++    PN  TY  L  GF   G+   +  VK+ F   V+ME+
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAMEA 853



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 7/280 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA     ++   G  P+V+  N ++NGLC+      A+ LF EM +   E      P  V
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCE------PTIV 56

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ +I GL     +D+A + F  M      P+V+ +T+LIHGFC A        LL + 
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +  +P+V     +++  CK G +D   ++L+ M+     P+A  Y  L+D  C  G++
Sbjct: 117 LKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +   ELF  M   GC  D  ++  LI     + +++EA  LY E+  +G +P +   ++L
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              L +  + + A +++  +    VA     Y + +DG C
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYC 275



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 1/205 (0%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +++A +   +M    L P+VV    +++G C A   ++A  L +EM   G +P +VS N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++ L    KMD A +  + M+     P+   + TL+ GFC  G+  +V  + ++     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D F Y  +I+GYCK  +++    +  E+   G  P    Y  L   L ++ + + A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGL 377
           +LF  M+ +    D  T+ T I+ L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEAL 204



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 1/179 (0%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EA   L EM   G+ P+VV+ N+++N LCK  K+D A  L   M      P   +YNT+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G     K++   + F SM   GC+ D  ++  LI+G+CK  + +    L N+   K  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRF 120

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +P V  Y ++ HG  +    +   K+  EM       D   Y   ID LC   +V   Y
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M+ A   L  M    + P+    N +++G C   KI++  ELF+ M SMGC+    SYN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE-------RALKLF 355
           +I+G     +++EA   +N +   G +P V+ + TL HG  +  Q +       +ALK F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
                     D   Y + I G C
Sbjct: 121 --------RPDVFLYTSVIHGYC 135


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 197/375 (52%), Gaps = 7/375 (1%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R M  SP   +  +IL G L + + +D+V   ++ + S GL PD++ Y +L  C  K G 
Sbjct: 156 REMKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGL 214

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
            S    +   +      PNV  +T  I  LC ++++ EA  +F  +K  G  PN+ TY+ 
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+G C+TG+   A  L+KE+            PN V +  ++DG CK   +  A+ LF+
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFV 328

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M    ++PN+  Y  LIHG C + +  EA GLL EM    + P+V +  +++N LC   
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           ++  A+RL   M    + P++ TYN+L+ G+C    + +  +L   M + G + +  +++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+GYC  ++++ A+ LY E+  KGI P VVTY  L    F+    + AL+L+ +M   
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508

Query: 362 DVAADTCTYRTFIDG 376
            +  +  T+   +DG
Sbjct: 509 GIHPNDHTFACLVDG 523



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 41/385 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + I +  L ++   +    +F+ +   G+ P+LYTYS +I+ +CK G V   + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL +   PNVV F +L+ G C    +V A +LF  +  FG +PN+  YN LI+G C+
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+ + A+ L  EM + N        P+  TY+I+I+GLC E  V +A  LF +MK E +
Sbjct: 352 SGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405

Query: 189 -----------------------------------NPNVVTYTSLIHGFCHANDWNEAKG 213
                                               PN++T+++LI G+C+  D   A G
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  EM  +G+ P+VV+   +++   K   M  A RL   M++  + PN  T+  L+DGF 
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++   + +          +   +  LI G C+N  +  A   ++++   GI P + 
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585

Query: 334 TYNTLFHGLFEIRQAERALKLFVEM 358
           +Y ++  G  + ++    + L  +M
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDM 610



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 15/340 (4%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           SIG+F      S+LI  F +MG       +  R ++   +P+     S++ GL    R  
Sbjct: 131 SIGVF------SLLIMEFLEMGLFEEALWV-SREMKC--SPDSKACLSILNGLVRRRRFD 181

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
                +  + + G  P+V  Y  L     + G       L  EMT+    +G+  KPN  
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS----LGI--KPNVY 235

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+I I  LC++  +++A+++F  MK   + PN+ TY+++I G+C   +  +A GL  E+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +   + PNVV    +++  CK  ++  A  L   MV+  V PN + YN L+ G C +G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                L   MES+    D F+Y ILING C   +V EA  L+ ++  + I P+  TYN+L
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HG  +    E+AL L  EM  + V  +  T+ T IDG C
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 153/355 (43%), Gaps = 41/355 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F  L+    K +   T  SLF  +   G+ P+LY Y+ LI+  CK G +     +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+V T+T LI GLC E ++ EA  LF K+K     P+  TYN+LI+G C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL+L  EMT    E      PN +T+S +IDG C    +  A  L+ +M  + +
Sbjct: 422 EYNMEQALDLCSEMTASGVE------PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN---------------------- 226
            P+VVTYT+LI       +  EA  L  +M++ G+ PN                      
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

Query: 227 -------------VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                         V    ++  LC+NG +  ASR    M  C + P+  +Y +++ G  
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
              +I     L   M   G   +     +L   Y  N  V+ A  L N    K +
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 2/250 (0%)

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           + + LF+E    + E+     P++     I++GL +    D     +  M    L P+V 
Sbjct: 143 LEMGLFEEALWVSREMKC--SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            Y  L         +++ + LL EM   G++PNV    + + +LC++ KM+ A ++ +LM
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  V PN +TY+ ++DG+C TG + +   L+  +       +   +  L++G+CK +E+
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             A SL+  +   G+ P +  YN L HG  +      A+ L  EM+  +++ D  TY   
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380

Query: 374 IDGLCVRPQV 383
           I+GLC+  QV
Sbjct: 381 INGLCIEDQV 390



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 25/223 (11%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGL---LIEMVDQGVQPNVVSS----------------- 230
           ++ +++++IH    A+ +  A+ L   LIE + +  +P+ +S                  
Sbjct: 74  DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG 133

Query: 231 --NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
             ++++ E  + G  + A   L +  +    P++    ++++G     + + V   +  M
Sbjct: 134 VFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S G   D   Y +L     K     +   L +E+   GIKP V  Y      L    + 
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           E A K+F  M+ + V  +  TY   IDG C    VR  Y   K
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 188/371 (50%), Gaps = 9/371 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PS   VS+   L+  L K  +  +   L  ++   G+ P L+ Y+ LIN  CK G++   
Sbjct: 318 PSEAAVSN---LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +F  +      PN VT++ LI   C   ++  A     K+   G +  V  Y++LI+G
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A +LF EM   NG      KPN V Y+ +I G CKEG +  A  L+ +M  
Sbjct: 435 HCKLGKLRAAKSLFDEMI-ANG-----LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + ++PN  T+T+LI G CHAN   EA  L  EMV+  V PN V+ NV++   CK G    
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LLD MV+  + P+ +TY  L+ G C TG+++  +E    ++    K ++  ++ L++
Sbjct: 549 AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLH 608

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCK   +++AL    E+  +G+   +V Y+ L +G+   +     + L  +M    +  
Sbjct: 609 GYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668

Query: 366 DTCTYRTFIDG 376
           D   Y T ID 
Sbjct: 669 DNVLYTTMIDA 679



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + + +L  L + + +   L LF  + S GL PD+Y Y+ ++   C++        +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            GR+  S    +V T+   I+GLC   R+ EA  +   L   G   +V TY TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +      +EM N   E G  F P+    S ++DGL K+G +  A +L  ++K   +
Sbjct: 298 ----VEEFEAGEEMMNEMIEFG--FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y +LI+  C     +EA+ L   M  +G+ PN V+ +++++  CK GK+D A  
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M +  ++   + Y++L+ G C  GK+   K LF  M + G K +   Y  LI+GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  E+  A  LY+E+  KGI P   T+  L  GL    +   A KLF EM   +V  +  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 532 TYNVLIEGHC 541



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 176/368 (47%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+++N+ +  L KN+     + +   L+  GL  D+ TY  L+   CK+ +   G  +  
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   F P+    ++L+ GL  +  I  A  L  K+K FG  P++  YN LIN +C+ G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF  M    G  G+   PN VTYSI+ID  CK G +D A     +M    +  
Sbjct: 370 KLDEAESLFNNM----GHKGLF--PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            V  Y+SLI G C       AK L  EM+  G++PNVV    +++  CK G++ NA RL 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + PN +T+  L+ G C   ++    +LF  M       ++ +YN+LI G+CK 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
                A  L +E+  KG+ P   TY  L  GL    +   A +   ++QG     +   +
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCF 603

Query: 371 RTFIDGLC 378
              + G C
Sbjct: 604 SALLHGYC 611



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  + K+   D   SLF  +   GLFP+  TYSILI+ FCK G++ +    
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++        V  ++SLI G C   ++  A +LF ++ A G +PNV+ Y +LI+G C+
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L+ EMT G G       PNT T++ +I GLC    + +A +LF +M   N+
Sbjct: 473 EGELHNAFRLYHEMT-GKG-----ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY  LI G C   +   A  LL EMV++G+ P+  +   +++ LC  G++  A  
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            ++ +     + N   ++ L+ G+C  G+++   +    M   G   D   Y++LI G  
Sbjct: 587 FMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGIL 646

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + ++    + L  ++  +G++P  V Y T+     +    + A  L+  M       +  
Sbjct: 647 RQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVV 706

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 707 TYTALINGLC 716



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 186/388 (47%), Gaps = 42/388 (10%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           SLF  + + GL P++  Y+ LI+ +CK G++   F ++  +     +PN  TFT+LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  +R+ EA  LF ++  +   PN +TYN LI G C+ G+T+ A  L  EM     E G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGL 561

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           V  P+T TY  +I GLC  G V +A+E    ++ E    N + +++L+HG+C     ++A
Sbjct: 562 V--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                EM+ +GV  ++V  +V++  + +     +   LL  M    +RP+   Y T++D 
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK---------------------- 309
               G +     L+  M S GC  +  +Y  LING CK                      
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739

Query: 310 -------------NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
                           +E+A+ L++ L  +G     VTYN L  G  ++ + + A ++ V
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 798

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            M  + ++ D  +Y T I   C R  ++
Sbjct: 799 NMIDSGISPDCISYSTIIYEYCRRGDLK 826



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 184/447 (41%), Gaps = 75/447 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    K         L+  +   G+ P+ YT++ LI+  C   +++    +
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG ++     PN VT+  LI+G C E   V A  L  ++   G  P+  TY  LI+GLC 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE---------- 178
           TG    A     ++       G   K N + +S ++ G CKEG +D A +          
Sbjct: 578 TGRVSEAREFMNDLQ------GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 179 -------------------------LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                                    L  QM  + L P+ V YT++I     A +   A G
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN------------ 261
           L   MV +G  PNVV+   ++N LCK G MD A  L   M+  +  PN            
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751

Query: 262 ----------------------AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
                                   TYN L+ GFC  G+I    E+ V+M   G   D  S
Sbjct: 752 SEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 811

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ +I  YC+  +++EA+ L+  +  +G+ P  V YN L +G     +  +A +L  +M 
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 871

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVRFT 386
              V  +  TY + I G C+   V  T
Sbjct: 872 RRGVKPNRATYNSLIHGTCLMSSVSST 898



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R C     + F  LI+      R ++   +   +   G  P + T + ++NGL R     
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           +AL+LF E+ +         +P+   Y+ ++  LC+     +A+E+  +M+    + +V 
Sbjct: 198 MALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY   I G C      EA  +   +  +G++ +V +   ++  LCK  + +    +++ M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++    P+    + L+DG    G I    +L   ++  G     F YN LIN  CK+ ++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA SL+N +  KG+ P  VTY+ L     +  + + AL    +M    + A    Y + 
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 374 IDGLCVRPQVR 384
           I G C   ++R
Sbjct: 432 ISGHCKLGKLR 442



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 204 HANDWNEAKGLLIE--MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +  +  E  GL++   M+D G+ P + + + ++N L +  +   A  L D +V   +RP+
Sbjct: 155 YVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPD 214

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            + Y  ++   C      R +E+   MES GC     +YN+ I G CKN+ V EA+ + N
Sbjct: 215 VYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
            L +KG++  V TY TL  GL ++ + E   ++  EM               +DGL    
Sbjct: 275 LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL---- 330

Query: 382 QVRFTYARRKGNSGNT 397
                  R+KGN G+ 
Sbjct: 331 -------RKKGNIGSA 339



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S++ ++    +       + L++ + + G+ PD   Y+ LI   C  G+++  F +
Sbjct: 807 PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 866

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA 101
              ++R    PN  T+ SLI G C  S +   A
Sbjct: 867 RDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTA 899


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 111/307 (36%), Positives = 182/307 (59%), Gaps = 6/307 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           + PN +T  +LIKGLC + +I +A     KL A G   + ++Y TLI+GLC+ G T  AL
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L + +       G + + N V Y+ +I G+CK+  V+ A +L+ +M  + ++PNVVTY+
Sbjct: 63  DLLQRVD------GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 116

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LI GF       +A  L  +++ + ++P+  + N++++  CK+ KM     +  +M++ 
Sbjct: 117 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 176

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + P+  TYN+L+DG+ L  ++N  K +F +M   G   D  SYNILING+CK K+V++A
Sbjct: 177 GIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 236

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++L+NE+  K I P VVTYN+L  GL +  +   AL+L  +M    V  +  TY + ID 
Sbjct: 237 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296

Query: 377 LCVRPQV 383
           L    QV
Sbjct: 297 LFKTHQV 303



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N L+  L              +L ++G   D  +Y  LI+  CK+G+      +
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+       N V + ++I G+C +  + +A  L++++ + G  PNV+TY+ LI+G   
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF ++   N       KP+  T++I++DG CK+  + + K +F  M  + +
Sbjct: 125 VGKLKDAIDLFNKIILEN------IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SL+ G+    + N AK +   M   GV P++ S N+++N  CK  K+D A  
Sbjct: 179 IPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M   ++ PN  TYN+L+DG   +G+I+   +L   M   G   +  +YN +I+   
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K  +V++A++L  +   +GI+P++ TY  L  GL +  + + A  +F ++
Sbjct: 299 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    PP + ++N ++  L K    D  ++L  +    G+ P +YTY+ILI+  CK G++
Sbjct: 279 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRL 338

Query: 63  SLGFVIF 69
                IF
Sbjct: 339 KDARNIF 345


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+  ++  LA +K  D    LF+ L + G  P++  Y+ +I+   K G++  G   F 
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P   T+T +I GLC    + +A  +F ++   GC P+ ITY TLI+G  +  
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L   M     E      P  VTY  I+ G CK   +++AKE+  QM+     P
Sbjct: 228 KMDEARKLLDVMLTKGPE------PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 281

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            +  +TSL+  +       EA  +L EM  +G  P+V+    +++ L   G++  A  + 
Sbjct: 282 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 341

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M++    P+A TY T++  F   G +    E+   M   G   D F+YN L++GY K 
Sbjct: 342 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 401

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCT 369
           + V++A  +Y+ +   GIKP  VT+N L HGLF+  + +RA  LF EM +  +V     +
Sbjct: 402 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461

Query: 370 YRTFIDGL 377
           Y   IDGL
Sbjct: 462 YTILIDGL 469



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 172/373 (46%), Gaps = 13/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+   +K    D    L   + + G  P   TY  +++ FCK+  ++    +
Sbjct: 211 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 270

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P +  FTSL+    ++ R  EA  + T++ A GC P+VI Y +LI+ L  
Sbjct: 271 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 330

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A ++F  M     E G    P+ +TY  II    K G V+ A E+   M    +
Sbjct: 331 TGRVPEARHVFDSMI----EKGCA--PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 384

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y SL+ G+      ++A G+   MV  G++PN V+ NV+M+ L K+GK D A  
Sbjct: 385 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNILI 304
           L   M++ + V P   +Y  L+DG    GK  RV E F+  + M   G   +  +Y  LI
Sbjct: 445 LFKEMLEKEEVPPTLVSYTILIDGL---GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
               K   + EA  L  ++   G+ P V  Y+ L  GL +    + A  +F EM     A
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561

Query: 365 ADTCTYRTFIDGL 377
            +  TY+    G 
Sbjct: 562 PNEVTYKVLRRGF 574



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 169/370 (45%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++ +++  L K +       +F+++   G  PD  TY+ LI+ F K  ++     +
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P  VT+ S++ G C    I EA  +  +++  GCEP +  + +L++    
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  EMT           P+ + Y+ +ID L   G V +A+ +F  M  +  
Sbjct: 296 KGRAEEAYQVLTEMTARG------CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY ++I  F    +   A  +L  M   GV P+  + N +M+   K  ++D A  
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGY 307
           + D MV   ++PNA T+N LM G    GK +R   LF  M E         SY ILI+G 
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   V EA   + E+  +GI P   TY +L + L +  +   A KL  +M    V  D 
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529

Query: 368 CTYRTFIDGL 377
             Y   I GL
Sbjct: 530 QAYSALITGL 539



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 181/367 (49%), Gaps = 7/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L K    +  L  F+ ++     P   TY+++I+  CK   +     +
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 200

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++++    P+ +T+T+LI G    S++ EA  L   +   G EP  +TY ++++G C+
Sbjct: 201 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 260

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  +M     E G+    + ++Y +       +G  ++A ++  +M     
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL------SKGRAEEAYQVLTEMTARGC 314

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+ YTSLI          EA+ +   M+++G  P+ ++   I+    K G ++ A  
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+LM +  V P+ F YN+LMDG+    ++++   ++  M + G K +  ++N+L++G  
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434

Query: 309 KNKEVEEALSLYNE-LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K+ + + A SL+ E L  + + PT+V+Y  L  GL +  +   A   F EM    +  + 
Sbjct: 435 KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPEC 494

Query: 368 CTYRTFI 374
            TY + I
Sbjct: 495 HTYTSLI 501



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 150/363 (41%), Gaps = 74/363 (20%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P +V++ ++I GL +  ++ EA   F  +   GCEP+VI + TLI+G C+ G   V   L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG--------------------------- 171
             +           F+P+   Y+ +I G CK G                           
Sbjct: 65  LNQALK-------RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKG 117

Query: 172 -----FVDKAKELFLQMKYENLNPNVVTYTS----------------------------- 197
                 +D+A ELF ++K    +PNVV YT+                             
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 198 ------LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
                 +I G C A    +A  +  +MV +G  P+ ++   +++   K  KMD A +LLD
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M+     P A TY +++ GFC    IN  KE+   M   GC+   F +  L++ Y    
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
             EEA  +  E+  +G  P V+ Y +L   LF   +   A  +F  M     A D  TY 
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357

Query: 372 TFI 374
           T I
Sbjct: 358 TII 360



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 11/288 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+  L           +F  +   G  PD  TY  +I  F K+G V     I
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 375

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +S   P+   + SL+ G     R+ +A  ++ ++ A G +PN +T+N L++GL +
Sbjct: 376 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 435

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A +LFKEM            P  V+Y+I+IDGL K G V +A   F +M    +
Sbjct: 436 DGKTDRAFSLFKEMLEKEE-----VPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TYTSLI+    A    EAK L+ +MV  GV P+V + + ++  L  +  +D A  
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK---INRVKELF---VSMES 290
           +   M++    PN  TY  L  GF   G+   +  VK+ F   V+ME+
Sbjct: 551 VFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAMEA 598



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 10/269 (3%)

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
            GCEP +++YNT+I+GL        A   F  M +   E      P+ + ++ +I G CK
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCE------PDVIAFTTLIHGFCK 54

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
            G      +L L    +   P+V  YTS+IHG+C A D +         V      +V+S
Sbjct: 55  AGQPQVGHKL-LNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVIS 110

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
              ++  L  + ++D A  L + +      PN   Y  ++DG    G+I    + F  M 
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              C     +Y ++I+G CK + + +A  ++ ++  KG  P  +TY TL  G  +  + +
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A KL   M          TY + + G C
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFC 259


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 194/402 (48%), Gaps = 38/402 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL---- 64
           P   +FN ++  L K    +    +  R+   G  PD  TY  L+N  CK+G+V      
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338

Query: 65  -----------------GFVIFGR-----------ILRSCFAPNVVTFTSLIKGLCAESR 96
                            GFV  GR           +      P+V T+ SLI G   +  
Sbjct: 339 FYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           +  A  +   ++  GC+PNV +Y  L++G C+ G    A NL  EM+          KPN
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG------LKPN 452

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           TV ++ +I   CKE  + +A E+F +M  +   P+V T+ SLI G C  ++   A  LL 
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+ +GV  N V+ N ++N   + G++  A +L++ MV      +  TYN+L+ G C  G
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++++ + LF  M   G      S NILING C++  VEEA+    E+  +G  P +VT+N
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L +GL    + E  L +F ++Q   +  DT TY T +  LC
Sbjct: 633 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 196/385 (50%), Gaps = 11/385 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR+++   P   S+N++L  L     +    ++F  + S  + P L+T+ +++   C + 
Sbjct: 166 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVN 225

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + +    PN V + +LI  L   +R+ EA  L  ++   GC P+  T+N
Sbjct: 226 EVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 285

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I GLC+      A  +   M          F P+ +TY  +++GLCK G VD AK+LF
Sbjct: 286 DVILGLCKFDRINEAAKMVNRMLIRG------FTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCK 239
               Y    P  V + +LIHGF      ++AK +L +MV   G+ P+V + N ++    K
Sbjct: 340 ----YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 395

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G +  A  +L  M     +PN ++Y  L+DGFC  GKI+    L   M + G K +   
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +N LI+ +CK   + EA+ ++ E+P KG KP V T+N+L  GL E+ + + AL L  +M 
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
              V A+T TY T I+    R +++
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIK 540



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 182/342 (53%), Gaps = 6/342 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K       L + + + + G  P++Y+Y+IL++ FCK+G++   + +
Sbjct: 381 PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNL 440

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V F  LI   C E RI EA  +F ++   GC+P+V T+N+LI+GLC 
Sbjct: 441 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 500

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L ++M +     GVV   NTVTY+ +I+   + G + +A++L  +M ++  
Sbjct: 501 VDEIKHALWLLRDMISE----GVV--ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 554

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY SLI G C A + ++A+ L  +M+  G+ P+ +S N+++N LC++G ++ A  
Sbjct: 555 LLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVE 614

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV     P+  T+N+L++G C  G+I     +F  +++ G   D  +YN L++  C
Sbjct: 615 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           K   V +A  L +E    G  P   T++ L   L      +R
Sbjct: 675 KGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 36/232 (15%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENL------------------------------- 188
           Y ++I  L   G       L +QMK E +                               
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167

Query: 189 -----NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 P   +Y  ++      N    A  +  +M+ + + P + +  V+M  LC   ++
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A  +L  M +    PN+  Y TL+       ++N   +L   M  MGC  D  ++N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           I G CK   + EA  + N +  +G  P  +TY  L +GL +I + + A  LF
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 49/94 (52%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +  S P + +FN L+  L +    +  L++F++L + G+ PD  TY+ L++  CK G V 
Sbjct: 621 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVY 680

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI 97
              ++    +   F PN  T++ L++ L  +  +
Sbjct: 681 DACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 175/335 (52%), Gaps = 6/335 (1%)

Query: 43  FPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
           +PD+ TY+ILI   C    V     +   +      P+VVT+  L+ G+C E R+ EA  
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
               + ++G +PNVIT+N ++  +C TG  + A  L  EM            P+ VT++I
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG------CSPSVVTFNI 126

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+ LC++G + +A ++  +M      PN ++Y  L+HGFC     + A   L  MV +G
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P++V+ N ++  LCK+GK+D A  LL+ +      P   TYNT++DG    GK ++  
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           EL   M   G K D  +Y+ LI G  +  +VEEA+  ++++   G+KP   TYN++  GL
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +Q +RA+     M          +Y   I+G+
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 177/316 (56%), Gaps = 7/316 (2%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           V+  ++ + C+ P+V+T+T LI+  CAES + +A  L  ++ + GC+P+V+TYN L+NG+
Sbjct: 3   VLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A+     M +   +      PN +T++II+  +C  G    A++L  +M  +
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQ------PNVITHNIILRSMCSTGRWMDAEKLLTEMVRK 115

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P+VVT+  LI+  C       A  +L +M   G  PN +S N +++  CK  KMD A
Sbjct: 116 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRA 175

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            + L++MV     P+  TYNT++   C  GK++   EL   + S GC     +YN +I+G
Sbjct: 176 IQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG 235

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             K  + ++A+ L +E+  KG+KP V+TY++L  GL    + E A+K F +++G  V  +
Sbjct: 236 LSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPN 295

Query: 367 TCTYRTFIDGLCVRPQ 382
             TY + + GLC   Q
Sbjct: 296 AFTYNSIMFGLCKAQQ 311



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+            + L   + S G  PD+ TY++L+N  CK G++      
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV+T   +++ +C+  R ++A  L T++   GC P+V+T+N LIN LCR
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A+++ ++M T+G         PN+++Y+ ++ G CKE  +D+A +    M    
Sbjct: 134 KGLLGRAIDILEKMPTHG-------CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++VTY +++   C     + A  LL ++  +G  P +++ N +++ L K GK D A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M    ++P+  TY++L+ G    GK+    + F  +E  G K + F+YN ++ G 
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           CK ++ + A+     +  KG KPT V+Y  L  G+     A+ AL+L  E+
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 6/288 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           + S P V + NI+L  +     +     L   +   G  P + T++ILIN  C+ G +  
Sbjct: 80  YGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGR 139

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I  ++      PN +++  L+ G C E ++  A      + + GC P+++TYNT++ 
Sbjct: 140 AIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLT 199

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+ G    A+ L  ++++          P  +TY+ +IDGL K G  D+A EL  +M+
Sbjct: 200 ALCKDGKVDAAVELLNQLSSKG------CSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+V+TY+SLI G        EA     ++   GV+PN  + N IM  LCK  + D
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
            A   L  M+    +P   +Y  L++G    G      EL   + S G
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 6/230 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    K K  D  +   + + S G +PD+ TY+ ++   CK G+V  
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++     +P ++T+ ++I GL    +  +A  L  +++  G +P+VITY++LI 
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+  F ++       G   KPN  TY+ I+ GLCK    D+A +    M 
Sbjct: 270 GLSREGKVEEAIKFFHDVE------GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMI 323

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            +   P  V+YT LI G  +     EA  LL E+  +GV     +  V++
Sbjct: 324 SKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 192/376 (51%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     ++    + K +   G  PD  TY+ +I   C+  +V   F++F  + +    P
Sbjct: 426 CLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A + F ++++ GC PNV+TY  L++   ++     A ++F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M      +G    PN +TYS +IDGLCK G + KA E++ ++                
Sbjct: 546 HRM------VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + ++PNVVTY +L++G C A   ++A  LL  M+  G +PN +  + +++  CK G++
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A  +   M +C   P+  TY +L+D     G+++   ++   M    C  +  +Y  +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ++G CK  E E+AL+L + +  KG  P VVTY  L  GL +  + +  L+LF++M+    
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 364 AADTCTYRTFIDGLCV 379
           A +  TYR  I+  C 
Sbjct: 780 APNYVTYRILINHCCA 795



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 10/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++  ++  L + K  D    LF+ +  +G+ PD+YTY+ILI+ FCK G +      
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +  +PNVVT+T+L+       ++ +A  +F ++    C PN ITY+ LI+GLC+
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  ++ ++  T+ N E    F+        PN VTY  +++GLCK   V  A +
Sbjct: 570 AGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +L+ GFC   + + A+ + + M   G  P+V +   +++ + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M++    PN  TY  ++DG C TG+  +   L   ME  GC  +  
Sbjct: 690 KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVV 749

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K  +V+  L L+ ++  KG  P  VTY  L +        + A  L  EM
Sbjct: 750 TYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM 809

Query: 359 QGNDVAADTCTYRTFIDGLCVR 380
           +          YRT + G   R
Sbjct: 810 KQTHWPKYLQGYRTTVQGFSKR 831



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 187/427 (43%), Gaps = 81/427 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  LL    K+K       +F R+     +P+  TYS LI+  CK G++     +
Sbjct: 520 PNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEV 579

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++ +                  +PNVVT+ +L+ GLC   ++ +A  L   + A GC
Sbjct: 580 YAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGC 639

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ L++G C+ G    A  +F  MT                    +G + +  K
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ ++DGLCK G  +KA  L   M+ +  +PNVVTYT+LI G  
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG 759

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR--------------- 248
            A   +    L ++M  +G  PN V+  +++N  C  G +D+A                 
Sbjct: 760 KAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQ 819

Query: 249 ------------------LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
                             LL+ M   D  P A  Y  L+D F   G++    EL   M  
Sbjct: 820 GYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMME 879

Query: 291 MGCKHDDFSYNI---LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +    +  S ++   LI   C + +VEEA++LY+E+  +GI P +  +  L  GL E  +
Sbjct: 880 VSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNK 939

Query: 348 AERALKL 354
              AL+L
Sbjct: 940 WNEALQL 946



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 171/414 (41%), Gaps = 53/414 (12%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           +   L    RL   G  P   TY+ L+      GQV + F +   +  S F  +  T  S
Sbjct: 185 WGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGS 244

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
             + LC E R  +A  L  + + F  +  + T   +I+GL        A++    M   +
Sbjct: 245 FAQALCKEGRWGDALDLLER-EDFKLDTVLCT--QMISGLMEASLFNEAMSFLHRMRCNS 301

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                 + PN VTY  ++ G  K+  +   K +   M  E  NP+   + SL+H +C+A 
Sbjct: 302 ------YIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAE 355

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-------------------------- 240
           D+  A  L   M   G  P  V  N+ +  +C                            
Sbjct: 356 DYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVL 415

Query: 241 ---------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
                          GK + A +++  M++    P+A TY  ++   C   ++++   LF
Sbjct: 416 NKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLF 475

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M+ +G   D ++Y ILI+ +CK   +E+A S ++E+   G  P VVTY  L H   + 
Sbjct: 476 QEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKS 535

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YARRKGNSGN 396
           +Q  +A  +F  M G+    +  TY   IDGLC   +++     YA+  G S N
Sbjct: 536 KQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDN 589



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/429 (20%), Positives = 175/429 (40%), Gaps = 60/429 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG-------- 60
           P   ++N L+  LA     +    + K +++ G   D  T        CK G        
Sbjct: 202 PSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL 261

Query: 61  ---------------------QVSL---GFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
                                + SL         R+  + + PNVVT+ +L+ G   + +
Sbjct: 262 LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQ 321

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           +     +   +   GC P+   +N+L++  C       A  LF  M            P 
Sbjct: 322 LGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG------CPPG 375

Query: 157 TVTYSIIIDGLCKEG------FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
            V Y+I I  +C          +D A++++ +M   +   N +   +     C    + +
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  ++ EM+ +G  P+  +   ++  LC+  ++D A  L   M +  V P+ +TY  L+D
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            FC  G I + +  F  M S GC  +  +Y  L++ Y K+K++ +A  +++ +      P
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEM-------------QGND---VAADTCTYRTFI 374
             +TY+ L  GL +  + ++A +++ ++             +G D   ++ +  TY   +
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALV 615

Query: 375 DGLCVRPQV 383
           +GLC   +V
Sbjct: 616 NGLCKAQKV 624



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 138/356 (38%), Gaps = 55/356 (15%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L++  C +    EA     +LK FG  P+ +TYN L+  L   G   +A  + KEM+   
Sbjct: 175 LVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG 234

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                 F  +  T       LCKEG    A +L   ++ E+   + V  T +I G   A+
Sbjct: 235 ------FCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEAS 285

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            +NEA   L  M      PNVV+   ++    K  ++    R++++M+     P+   +N
Sbjct: 286 LFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFN 345

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV------------- 313
           +L+  +C         +LF  M + GC      YNI I   C  +E+             
Sbjct: 346 SLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVY 405

Query: 314 ----------------------------EEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                                       E+A  +  E+  KG  P   TY  +   L + 
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA 465

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFID-----GLCVRPQVRFTYARRKGNSGN 396
           ++ ++A  LF EM+   V  D  TY   ID     GL  + Q  F   R  G S N
Sbjct: 466 KRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 12/233 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K    D  L LF ++ + G  P+  TY ILIN  C  G +    ++
Sbjct: 746 PNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLL 805

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++ +   +  + + ++G     R + +  L  ++++    P    Y  LI+   +
Sbjct: 806 LDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSK 863

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L KEM   +  + +  K     ++ +I  LC    V++A  L+ +M+   +
Sbjct: 864 AGRLETALELHKEMMEVSSSLNMASKD---MHTSLIQALCLSSQVEEAVALYSEMRRRGI 920

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            P++  +  L+ G    N WNEA  L   +  +GV       N   N+ C  G
Sbjct: 921 VPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV-------NWEGNKFCDGG 966



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 3/155 (1%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           NV++   C  G    A   L  +     RP+A TYN L+      G++     +   M +
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D  +        CK     +AL L     F   K   V    +  GL E      
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDF---KLDTVLCTQMISGLMEASLFNE 289

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           A+     M+ N    +  TYRT + G   + Q+ +
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGW 324


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 195/402 (48%), Gaps = 38/402 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL---- 64
           P   +FN ++  L K    +    +  R+   G  PD  TY  L+N  CK+G+V      
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344

Query: 65  -----------------GFVIFGR-----------ILRSCFAPNVVTFTSLIKGLCAESR 96
                            GFV  GR           +      P+V T+ SLI G   E  
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           +  A  +   ++  GC+PNV +Y  L++G C+ G    A N+  EM+          KPN
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG------LKPN 458

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           TV ++ +I   CKE  + +A E+F +M  +   P+V T+ SLI G C  ++   A  LL 
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+ +GV  N V+ N ++N   + G++  A +L++ MV      +  TYN+L+ G C  G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++++ + LF  M   G    + S NILING C++  VEEA+    E+  +G  P +VT+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +L +GL    + E  L +F ++Q   +  DT T+ T +  LC
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 198/385 (51%), Gaps = 11/385 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR+++   P   S+N++L  L     +    ++F  + S  + P L+T+ +++  FC + 
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +   + +    PN V + +LI  L   +R+ EA  L  ++   GC P+  T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I GLC+      A  +   M          F P+ +TY  +++GLCK G VD AK+LF
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRG------FAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCK 239
               Y    P +V + +LIHGF      ++AK +L +MV   G+ P+V + N ++    K
Sbjct: 346 ----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G +  A  +L  M     +PN ++Y  L+DGFC  GKI+    +   M + G K +   
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +N LI+ +CK   + EA+ ++ E+P KG KP V T+N+L  GL E+ + + AL L  +M 
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
              V A+T TY T I+    R +++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIK 546



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 180/342 (52%), Gaps = 6/342 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K       L +   + + G  P++Y+Y+IL++ FCK+G++   + +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V F  LI   C E RI EA  +F ++   GC+P+V T+N+LI+GLC 
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L ++M +     GVV   NTVTY+ +I+   + G + +A++L  +M ++  
Sbjct: 507 VDEIKHALWLLRDMISE----GVV--ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY SLI G C A + ++A+ L  +M+  G  P+ +S N+++N LC++G ++ A  
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV     P+  T+N+L++G C  G+I     +F  +++ G   D  ++N L++  C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           K   V +A  L +E    G  P   T++ L   +      +R
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP    ++N L+  L +    D   SLF+++   G  P   + +ILIN  C+ G V    
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                ++     P++VTF SLI GLC   RI +   +F KL+A G  P+ +T+NTL++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679

Query: 127 CRTGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           C+ G    A  L  E + +G       F PN  T+SI++  +  +  +D+ +
Sbjct: 680 CKGGFVYDACLLLDEGIEDG-------FVPNHRTWSILLQSIIPQETLDRRR 724



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 6/245 (2%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           ++ LF    + NG     ++ +   Y ++I  L   G       L +QMK E +      
Sbjct: 94  SMELFSWTGSQNG-----YRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL 148

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           + S++  +  A    +   L++EM +    +P   S NV++  L        A+ +   M
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +   + P  FT+  +M  FC   +I+    L   M   GC  +   Y  LI+   K   V
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EAL L  E+   G  P   T+N +  GL +  +   A K+   M     A D  TY   
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 374 IDGLC 378
           ++GLC
Sbjct: 329 MNGLC 333


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 201/419 (47%), Gaps = 50/419 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--------- 59
           P V S N ++  L +  +++    ++ R+   G+  D+YTY+I I  FCK          
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 60  --------------------------GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                     G+      +F  +L  C  P+VV F  L+  LC 
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG---------HTIVALNLFKEMTN 144
           +  + E+  L  K+   G  PN+ T+N  + GLCR G           + A    ++M N
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
           G       F+P+ +TY+ IIDG CK+G V  A  +     ++   P+  TY SLI+GFC 
Sbjct: 289 GG------FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCK 342

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             D + A  +  + + +G++P++V  N ++  L + G +  A +L++ M +    PN +T
Sbjct: 343 DGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWT 402

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YN +++G C  G ++    L     + GC  D F+YN LI+GYCK  +++ A  + N + 
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +G+ P V+TYNTL +GL +  ++E  +++F  M+      +  TY   +D LC   +V
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 192/375 (51%), Gaps = 15/375 (4%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  ++  L  +  +D    LF  + +  L PD+  ++ L++  CK G V     + G++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 73  LRSCFAPNVVTFTSLIKGLCAE---------SRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L+    PN+ TF   ++GLC E         SR+VEA     K+   G EP+ +TYN++I
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G C+ G    A  + K+           FKP+  TY  +I+G CK+G  D+A  +F   
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKG------FKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             + L P++V Y +LI G         A  L+ EM + G  PN+ + N+++N LCK G +
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +AS L+D  +     P+ FTYNTL+DG+C   K++   E+   M S G   D  +YN L
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           +NG CK  + EE + ++  +  KG  P ++TYN +   L + ++   A+ L  EM+   +
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 364 AADTCTYRTFIDGLC 378
             D  ++ T   G C
Sbjct: 537 KPDVVSFGTLFTGFC 551



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 7/344 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD +TY  LIN FCK G       +F   L     P++V + +LIKGL  +  I+ A
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  ++   GC PN+ TYN +INGLC+ G    A +L  +       I     P+  TY
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDD------AIAKGCPPDIFTY 438

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG CK+  +D A E+  +M  + + P+V+TY +L++G C A    E   +   M +
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  PN+++ N+I++ LCK  K++ A  LL  M    ++P+  ++ TL  GFC  G I+ 
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 281 VKELFVSMESM-GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +LF  ME      H   +YNI+++ + +   +  A+ L++ +   G  P   TY  + 
Sbjct: 559 AYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVI 618

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            G  ++    +  K  +E           T+   ++ LCV+ +V
Sbjct: 619 DGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKV 662



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 50/340 (14%)

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL---------------- 126
            +   +K    + ++ EA   F ++  + C+P+V ++N ++N L                
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 127 -------------------CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
                              C+T     AL L + M     E+G     N V Y  ++ GL
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP----ELGC--DSNAVAYCTVVAGL 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
              G  D A+ELF +M    L P+VV +  L+H  C      E++ LL +++ +GV PN+
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251

Query: 228 VSSNVIMNELCKNGKMDNASR---------LLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            + N+ +  LC+ G +D A R          L  MV     P+  TYN+++DG+C  G +
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +       G K D+F+Y  LING+CK+ + + A++++ +   KG++P++V YNTL
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GL +      AL+L  EM  N    +  TY   I+GLC
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLC 411



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 7/264 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N L+    K    D+   +  R+ S G+ PD+ TY+ L+N  CK G+      
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVME 491

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +      PN++T+  ++  LC   ++ EA  L  ++K+ G +P+V+++ TL  G C
Sbjct: 492 IFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFC 551

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  LF+ M     E        T TY+II+    ++  ++ A +LF  MK   
Sbjct: 552 KIGDIDGAYQLFRRM-----EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +P+  TY  +I GFC   +  +    L+E +++   P++ +   ++N LC   K+  A 
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDG 271
            ++ LM+Q  + P   T NT+ + 
Sbjct: 667 GIIHLMLQKGIVPE--TVNTIFEA 688



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 9/225 (4%)

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G V +A + F +M + N +P+V ++ ++++        N+A  + + M D+GVQ +V 
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +  + +   CK  +   A RLL  M +     NA  Y T++ G   +G+ +  +ELF  M
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            +     D  ++N L++  CK   V E+  L  ++  +G+ P + T+N    GL      
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 349 ERALK---------LFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +RA++            +M       D  TY + IDG C +  V+
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQ 312



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 4/209 (1%)

Query: 175 KAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           KA E+F   K E+       TY  ++    H  ++ E + LL EM  + V   ++    I
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-RENVNNALLEGAYI 80

Query: 234 --MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
             M    + GK+  A    + M   +  P+  ++N +M+     G  N+  ++++ M   
Sbjct: 81  EAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDR 140

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D ++Y I I  +CK      AL L   +P  G     V Y T+  GL++  + + A
Sbjct: 141 GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA 200

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +LF EM    +  D   +   +  LC +
Sbjct: 201 RELFDEMLARCLCPDVVAFNKLVHVLCKK 229


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 191/410 (46%), Gaps = 46/410 (11%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG- 65
           +PP   ++N L+    K        +   R+   GL PD +TY+ L+   C+ G ++   
Sbjct: 86  APPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAAC 145

Query: 66  --FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             FV   R   +C+  +  ++T LIKGLCA  RI +A  +F K+    C P V TY  L+
Sbjct: 146 GLFVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLL 203

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GLC+      A  L  EM N     GVV  PN VTY+ +I GLC+EG  D   +L  +M
Sbjct: 204 DGLCKVRRVGEAEALLGEMVNK----GVV--PNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           + +  +P+  TYT ++HG C          +L E + +GV   V++ N ++N  CK G M
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--------------- 288
             A  +L LM +  V P   T+N ++ GFC  GK+++       M               
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 289 --------------------ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
                               E  G   D  +Y I I+  C   ++EEA SL++ LP KGI
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           K   V Y +L HG  ++   + A  L  +M   +   D  TY T IDGLC
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLC 487



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 182/362 (50%), Gaps = 6/362 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L      D    +F +++     P ++TY++L++  CK+ +V     + G +
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PNVVT+ +LI GLC E R  +   L  K++     P+  TY  +++GLC+ G  
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                +  E       IG       +TY+ +I+G CK G +  A ++   MK   +NP V
Sbjct: 283 GHGAKVLHE------AIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGV 336

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T+  +IHGFC     ++A   L +M   G+ PN V+ N +++  C  G+   A RLLDL
Sbjct: 337 QTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDL 396

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  V P+  TY   +D  C  G++     LF  +   G K  +  Y  L++GYC+  +
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A  L  ++  +   P V TYNTL  GL ++++ +RA+ L  +M+   +   TCT+  
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516

Query: 373 FI 374
            I
Sbjct: 517 LI 518



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 189/410 (46%), Gaps = 49/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS------------------ 50
           P V ++N L+G L +   +D V  L +++      PD +TY+                  
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288

Query: 51  -----------------ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                             LIN +CK G +     +   + R+   P V TF  +I G C 
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ +A A  T++   G  PN +T+N+LI+G C  G   +AL L   M     E GV+ 
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME----EYGVL- 403

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+  TY+I ID LC EG +++A  LF  +  + +  + V YTSL+HG+C   D + A G
Sbjct: 404 -PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+ +M  +   P+V + N +++ LCK  ++D A  LLD M +  + P   T+N L+    
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILIN-----GYCKNKEVEEALSLYNELPFKGI 328
              K     +++  M S GCK D  +Y + I+     G  K + ++ A+    E+   G+
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGV 579

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            P V TYN +     +    E+A    V+M    +  D  TY   ++ +C
Sbjct: 580 FPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC 629



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 161/310 (51%), Gaps = 5/310 (1%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +L+S   PN  T+ +LI   C  + + +A A   +++  G  P+  TYN L+ GLCR
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF +M       G  +  +  +Y+I+I GLC  G +D A  +F +M     
Sbjct: 138 AGLLAAACGLFVQMPR---RWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWC 192

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TYT L+ G C      EA+ LL EMV++GV PNVV+ N ++  LC+ G+ D+ ++
Sbjct: 193 RPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTK 252

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M      P+ +TY  ++ G C  GK+    ++       G   +  +YN LINGYC
Sbjct: 253 LLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC 312

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++ AL +   +    + P V T+N + HG     +  +A+    +M G  ++ +T 
Sbjct: 313 KGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTV 372

Query: 369 TYRTFIDGLC 378
           T+ + I G C
Sbjct: 373 TFNSLISGQC 382



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 151/351 (43%), Gaps = 27/351 (7%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D+   L +++ S    PD++TY+ LI+  CK+ ++     +  ++ +    P   TF  L
Sbjct: 458 DSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           IK +  + +  +AA ++ ++ + GC+P+  TY   I+     G T    N+   +   + 
Sbjct: 518 IKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEE-NIDMAVVEMH- 575

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           E GV   P+  TY+ II      G  +KA    ++M    ++P+  TY+ L++  C+ +D
Sbjct: 576 EAGVF--PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDD 633

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNE-LCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
                                 S+   NE + K   + N   L + M + D  P   TY 
Sbjct: 634 ----------------------SDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYK 671

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G C   ++  V+ L + M+      D+   + L+  YC  +   EA   +  +  +
Sbjct: 672 ALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQ 731

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +P + +   L  GL +      A+ +F +M G     D   ++  ID L
Sbjct: 732 SFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 7/198 (3%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PN  TY +LI+  C      +A+  L+ M + G+ P+  + N +M  LC+ G +  A   
Sbjct: 88  PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAAC-- 145

Query: 250 LDLMVQCDVRPNA----FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
             L VQ   R  A    ++Y  L+ G C  G+I+    +F  M    C+    +Y +L++
Sbjct: 146 -GLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLD 204

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK + V EA +L  E+  KG+ P VVTYN L  GL +  + +   KL  +M+    + 
Sbjct: 205 GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP 264

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY   + GLC   +V
Sbjct: 265 DCWTYTQVVHGLCKHGKV 282


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 190/379 (50%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++G L      +   SLF+ +   G+ P +YTY+ILI+ FCK G +      
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     PNVVT+T+LI       ++  A  LF  +   GC+PNV+TY  LI+G C+
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 129 TGHTIVALNLFKEMTNG--NGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  ++  M     + ++   FK        PN +TY  ++DGLCK   V +A E
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y ++I GFC      +A+ +  +M ++G  PN+ + +  ++ L 
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+ ++D   ++L  M++    PN   Y  ++DG C  GK +   +L + ME  GC  +  
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVV 757

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+G+ K+ ++E+ L L+ ++  KG  P  +TY  L +        + A KL  EM
Sbjct: 758 TYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +         ++R  I+G 
Sbjct: 818 KQTYWPKHILSHRKIIEGF 836



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 181/375 (48%), Gaps = 22/375 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    +   +   G  PD  TYS +I   C   +V   F +F  + R+   P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A   F ++   GC PNV+TY  LI+   +     VA  LF
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM----------KYENLN 189
            EM    G      KPN VTY+ +IDG CK G ++KA +++ +M          KY  L+
Sbjct: 554 -EMMLLEG-----CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLD 607

Query: 190 ------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                 PNV+TY +L+ G C AN   EA  LL  M+  G +PN +  + +++  CK GK+
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +A  +   M +    PN +TY++ +D      +++ V ++   M    C  +   Y  +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ++G CK  + +EA  L  ++  KG  P VVTY  +  G  +  + E+ L+LF +M     
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 364 AADTCTYRTFIDGLC 378
           A +  TYR  I+  C
Sbjct: 788 APNFITYRVLINHCC 802



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 194/419 (46%), Gaps = 55/419 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ +   G  P++ TY+ LI+  CK GQ+     I
Sbjct: 528 PNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQI 587

Query: 69  FGRIL----------------RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + R+                  +C  PNV+T+ +L+ GLC  +R+ EA  L   + A GC
Sbjct: 588 YARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGC 647

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ +I+G C+ G    A  +F +M+                    +  + +V K
Sbjct: 648 EPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLK 707

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN V Y+ ++DGLCK G  D+A +L L+M+ +  NPNVVTYT++I GF 
Sbjct: 708 VLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFG 767

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            +    +   L  +M  +G  PN ++  V++N  C NG +D A +LLD M Q     +  
Sbjct: 768 KSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHIL 827

Query: 264 TYNTLMDGFC--LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           ++  +++GF       I  + EL    ES+     D  Y ILI+ Y K   +E AL L  
Sbjct: 828 SHRKIIEGFSQEFITSIGLLDEL-SENESVPV---DSLYRILIDNYIKAGRLEVALDLLE 883

Query: 322 EL---PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           E+   P   +    + Y +L   L    + ++AL+L+  M   +V  +       I GL
Sbjct: 884 EISSSPSHAVSNKYL-YASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGL 941



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 51/420 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N ++  L +   ++  + +  R+ S    P++ TY IL++   + GQ+     I
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
              ++     PN   F SLI   C       A  LF K+   GC+P  + YN  I  +C 
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 128 ---RTGHTIVAL--NLFKEMTN------------------GNGEIGVVFK---------- 154
              +    I+ L    + EM +                  G G+    FK          
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 155 -PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+  TYS +I  LC    V+KA  LF +MK   + P+V TYT LI  FC A    +A+ 
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              EM+ +G  PNVV+   +++   K  +M  A  L ++M+    +PN  TY  L+DG C
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 274 LTGKINRVKELFVSMES----------MGCKHDD------FSYNILINGYCKNKEVEEAL 317
             G+I +  +++  M                H++       +Y  L++G CK   V+EA 
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L + +   G +P  + Y+ +  G  +I + + A ++F +M     + +  TY +FID L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 174/401 (43%), Gaps = 21/401 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N L+    +    DT   + + + S     D YT S      CK G+    F +
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                   F P+ V +  ++ GLC  S   EA  +  ++++  C PNV+TY  L++G  R
Sbjct: 269 IDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G       +   M T G         PN   ++ +I   CK      A +LF +M    
Sbjct: 327 KGQLGRCKRILSMMITEG-------CYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG 379

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLL-------IEMVDQGVQPNVVSSNVIMNELCKN 240
             P  + Y   I   C +N+   +  +L        EM+D GV  N V+ +     LC  
Sbjct: 380 CQPGYLVYNIFIGSVC-SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGA 438

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK D A +++  M+     P+  TY+ ++   C   K+ +   LF  M+  G     ++Y
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILI+ +CK   +++A   ++E+  KG  P VVTY  L H   + +Q   A +LF  M  
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558

Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFT---YARRKGNSGNTN 398
                +  TY   IDG C   Q+      YAR +G+  +++
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSD 599



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 165/356 (46%), Gaps = 10/356 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H +   P V ++  L+  L K         L   + + G  P+   Y  +I+ FCK+G
Sbjct: 606 LDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +F ++    ++PN+ T++S I  L  ++R+     + +K+    C PNV+ Y 
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +++GLC+ G T  A  L  +M     E G    PN VTY+ +IDG  K G +++  ELF
Sbjct: 726 EMVDGLCKIGKTDEAYKLMLKME----EKGC--NPNVVTYTAMIDGFGKSGKIEQCLELF 779

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  +   PN +TY  LI+  C     +EA  LL EM       +++S   I+    + 
Sbjct: 780 RDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ- 838

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF--VSMESMGCKHDDF 298
            +   +  LLD + + +  P    Y  L+D +   G++    +L   +S        + +
Sbjct: 839 -EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKY 897

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            Y  LI       +V++AL LY  +  K + P +     L  GL ++ + + AL+L
Sbjct: 898 LYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 133/334 (39%), Gaps = 51/334 (15%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L++  C       A     +LK FG +P+  TYN LI    R      A  + +EM    
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREM---- 237

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYENLNPNVVTYTSLIHGFCHA 205
             +   F  +  T S     LCK G   K +E F L  + E+  P+ V Y  ++ G C A
Sbjct: 238 --LSYAFVMDRYTLSCFAYSLCKGG---KCREAFDLIDEAEDFVPDTVFYNRMVSGLCEA 292

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
           + + EA  +L  M      PNVV+  ++++   + G++    R+L +M+     PN   +
Sbjct: 293 SLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIF 352

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE------------- 312
           N+L+  +C +   +   +LF  M   GC+     YNI I   C N+E             
Sbjct: 353 NSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKA 412

Query: 313 ----------------------------VEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
                                        ++A  +  E+  KG  P   TY+ +   L +
Sbjct: 413 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCD 472

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + E+A  LF EM+ N +     TY   ID  C
Sbjct: 473 ASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFC 506



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 29/279 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++  + CL K+   D VL +  ++      P++  Y+ +++  CK+G+    + +
Sbjct: 684 PNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKL 743

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVVT+T++I G     +I +   LF  + + GC PN ITY  LIN  C 
Sbjct: 744 MLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCS 803

Query: 129 TGHTIVALNLFKEMTNGNG--------------------EIGVVFK-------PNTVTYS 161
            G    A  L  EM                          IG++ +       P    Y 
Sbjct: 804 NGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYR 863

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNP--NVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           I+ID   K G ++ A +L  ++     +   N   Y SLI    HA+  ++A  L   M+
Sbjct: 864 ILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMI 923

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
            + V P +     ++  L K  K   A +L D + Q D+
Sbjct: 924 SKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDI 962



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 3/150 (2%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++ + C+NG  + A   L  +     +P+  TYN L+  F    K++    +   M S
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
                D ++ +      CK  +  EA  L +E   +   P  V YN +  GL E    E 
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           A+ +   M+ +    +  TYR  + G C+R
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSG-CLR 326


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 6/324 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP   ++  ++  L K K  D  L+  + + + G+ PD + Y+ +++  C+  +V    
Sbjct: 5   APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 64

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++F ++++    PNVVT+ +LI GLC   RI  A  LF ++   G  P  ++YNTLI+G 
Sbjct: 65  LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+    + A ++F +M   N        PN VTY+ +IDGL K G V  A E+   M  +
Sbjct: 125 CKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PNV TY+ LI GFC     +EA  LL +MV QG+ P VV+ N+++N LC+  K+++A
Sbjct: 179 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 238

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L   M Q    P   TYNTL+   C   +++    L+  M + GC  D  +Y+ L  G
Sbjct: 239 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 298

Query: 307 YCKNKEVEEALSLYNELPFKGIKP 330
             +  +V EA  L  ++      P
Sbjct: 299 LTRAGKVHEAQELMEKMKLTKRNP 322



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 163/316 (51%), Gaps = 6/316 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD  TY  ++   CK  ++         +      P+   +  ++ GLC E ++ EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F K+      PNV+TYNTLINGLC+      A  LFKEM  G G     + P  V+Y+ +
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMA-GKG-----YVPTEVSYNTL 120

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG CK+  +  AK++F +M   N  PNVVTYT+LI G   +     A  +L  MV +GV
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNV + + +++  CK  ++D A +LL+ MV   + P   TYN L++  C   K+    +
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           LF  M    C     +YN L+   C +K+++ A  LY E+  KG  P  +TY+TL  GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 344 EIRQAERALKLFVEMQ 359
              +   A +L  +M+
Sbjct: 301 RAGKVHEAQELMEKMK 316



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 6/299 (2%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+ +T+  +++ LC   RI +A A   ++   G +P+   YN +++GLC+      A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F++M            PN VTY+ +I+GLCK   ++ A ELF +M  +   P  V+Y +L
Sbjct: 67  FEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           I GFC   D   AK +  +MV     PNVV+   +++ L K+GK+  A+ +LD MV+  V
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN  TY+ L+DGFC   +++   +L   M + G      +YNIL+N  C+  ++E+A  
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L+  +  +   PTVVTYNTL   L   +Q + A +L+ EM       D  TY T   GL
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 299



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 140/270 (51%), Gaps = 6/270 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+ +TY  ++  LC+T     AL   +EM           KP+   Y+ ++ GLC+E  V
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRG------IKPDAFIYNFVLSGLCQEEKV 60

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           ++A+ LF +M  + +NPNVVTY +LI+G C A     A  L  EM  +G  P  VS N +
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  CK   +  A  + D MV+ +  PN  TY TL+DG   +GK+    E+   M   G 
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +  +Y+ LI+G+CK + V+EA  L  ++  +GI PTVVTYN L + L    + E A K
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           LF  M          TY T +  LC   Q+
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQL 270



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  +Y  ++   CK K +++AL+   E+  +GIKP    YN +  GL +  + E A  LF
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
            +M    +  +  TY T I+GLC   ++   Y   K  +G 
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK 108


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 194/383 (50%), Gaps = 9/383 (2%)

Query: 1   MRHMHPS---PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           +R + PS    P V S+N +L  L   + +  V  L + + + G  P++ T+S LI   C
Sbjct: 204 LRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLC 263

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           + G       +  ++     AP+V  + ++I G+C E R+  A  +  ++ ++G  PNV+
Sbjct: 264 RNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVV 323

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            YNTL+ GLC       A  L  EM + +  +      + VT++I++D LC+ G VD+  
Sbjct: 324 CYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL------DDVTFNILVDFLCQNGLVDRVI 377

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E+  QM      P+V+TYT++I+GFC     +EA  LL  M   G +PN VS  +++  L
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C   +  +A  L+  M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D 
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 497

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            SY+ +I+G  K    +EAL L N +  KG+ P  + Y+++   L    +  + +++F  
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFEN 557

Query: 358 MQGNDVAADTCTYRTFIDGLCVR 380
           +Q   V +D   Y   I  LC R
Sbjct: 558 IQDTTVRSDAVLYNAVISSLCKR 580



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 209/402 (51%), Gaps = 28/402 (6%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   P+PP    +++ L    +   +   + + + L+  G   D+   ++++   C  G 
Sbjct: 140 RGCAPTPP---MYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGP 196

Query: 62  VSLGFVIFGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           V     +   +L S  C  P+VV++ ++++GLC   R      L  ++ A GC PN++T+
Sbjct: 197 VDEAVRLLRDLLPSFGC-EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTF 255

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGV-VFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +TLI  LCR G       LF+ +   + ++      P+   Y+ IIDG+CKE  ++ A+ 
Sbjct: 256 STLIGHLCRNG-------LFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +  +M    L+PNVV Y +L+ G C A+ W EA+GLL EM D+    + V+ N++++ LC
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           +NG +D    +L+ M++    P+  TY T+++GFC  G I+    L  SM + GC+ +  
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTV 428

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY I++ G C  +   +A  L +++  +G  P  VT+NTL + L +    E+A++L  +M
Sbjct: 429 SYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 488

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTNRG 400
             N  + D  +Y T IDGL              G +GNT+  
Sbjct: 489 LVNGCSPDLISYSTVIDGL--------------GKAGNTDEA 516



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +F+ L+G L +N  ++ V  +  ++   G  PD+  Y+ +I+  CK  ++ +   
Sbjct: 249 PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+     +PNVV + +L+KGLC+  R  EA  L  ++    C  + +T+N L++ LC
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + + ++M     E G +  P+ +TY+ +I+G CKEG +D+A  L   M    
Sbjct: 369 QNGLVDRVIEVLEQML----EHGCM--PDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN V+YT ++ G C A  W +A+ L+ +M+ QG  PN V+ N ++N LCK G ++ A 
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M+     P+  +Y+T++DG    G  +   EL   M   G   +   Y+ + +  
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                + + + ++  +    ++   V YN +   L +  + +RA++    M  +    + 
Sbjct: 543 SGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602

Query: 368 CTYRTFIDGL 377
            TY   I GL
Sbjct: 603 STYTILIRGL 612



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 159/319 (49%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L     ++    L   +       D  T++IL++  C+ G V     +
Sbjct: 320 PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEV 379

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + A GC PN ++Y  ++ GLC 
Sbjct: 380 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS 439

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L  +M            PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 440 AERWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 493

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A + +EA  LL  MV +G+ PN +  + I + L   G+++   +
Sbjct: 494 SPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQ 553

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + +    VR +A  YN ++   C  G+ +R  E    M S GC  ++ +Y ILI G  
Sbjct: 554 MFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLA 613

Query: 309 KNKEVEEALSLYNELPFKG 327
               V+EA  +  EL  KG
Sbjct: 614 SEGFVKEAQEILTELCSKG 632



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 51/369 (13%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           Y+ ++  +C+ GQ++    +   +     APN  T+  L++ LCA  RI +A A+   + 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG---EIGVVFKPNTVTYSIIID 165
             GC P    Y+  +   CR      A+ + +++ +G G   ++G          ++++ 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL-HGRGCALDVG--------NCNLVLQ 189

Query: 166 GLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            +C +G VD+A  L   +       P+VV+Y +++ G C A  W   + L+ EMV  G  
Sbjct: 190 AVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCP 249

Query: 225 PNVVSSNVIMNELCKNG-----------------------------------KMDNASRL 249
           PN+V+ + ++  LC+NG                                   +++ A  +
Sbjct: 250 PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L+ M    + PN   YNTL+ G C   +    + L   M    C  DD ++NIL++  C+
Sbjct: 310 LNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQ 369

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N  V+  + +  ++   G  P V+TY T+ +G  +    + A+ L   M       +T +
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429

Query: 370 YRTFIDGLC 378
           Y   + GLC
Sbjct: 430 YTIVLKGLC 438



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 132/331 (39%), Gaps = 48/331 (14%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
            ++LI+ LCA  R  EAA   +          V+ YN ++ G CR G    A  L     
Sbjct: 50  LSALIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLAAARRLAAS-- 104

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                  V   PN  TY  ++  LC  G +  A  +   M      P    Y   +   C
Sbjct: 105 -------VPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAAC 157

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DL---------- 252
            A+ +  A G+L ++  +G   +V + N+++  +C  G +D A RLL DL          
Sbjct: 158 RASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDV 217

Query: 253 -------------------------MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                                    MV     PN  T++TL+   C  G   RV E+   
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQ 277

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   GC  D   Y  +I+G CK + +E A  + N +P  G+ P VV YNTL  GL    +
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            E A  L  EM   D   D  T+   +D LC
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 195/384 (50%), Gaps = 10/384 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-LFPDLYTYSILINCFCKM 59
           +R M P P  V+ +N ++            L + + +   G + P+ YTY  +I+ +CK+
Sbjct: 177 LRQM-PRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234

Query: 60  GQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G+V     +F  +L +    P  V + +LI G C + ++  A     ++   G    V T
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN L++ L   G    A  L +EM  G G    VF     TY+I+I+G CKEG V KA E
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEM-GGKGLALDVF-----TYNILINGHCKEGNVKKALE 348

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M    +   VVTYTSLI+         E   L  E V +G++P++V  N ++N   
Sbjct: 349 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 408

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +G +D A  ++  M +  + P+  TYNTLM G CL G+++  ++L   M   G + D  
Sbjct: 409 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 468

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI+GY    +V++AL + NE+  KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 469 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQ 382
             N +  D  TY + I+GL    +
Sbjct: 529 VENGITPDDSTYISLIEGLTTEDE 552



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 174/369 (47%), Gaps = 12/369 (3%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++FNI+L  L         L L +++      P+  TY+ +I  FC  G+V     I   
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 72  IL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRT 129
           +  R   APN  T+ ++I G C   R+ EA  +F ++   G  +P  + YN LI G C  
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    AL     M     E GV       TY++++  L  +G   +A EL  +M  + L 
Sbjct: 271 GKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 324

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            +V TY  LI+G C   +  +A  +   M  +GV+  VV+   ++  L K G++    +L
Sbjct: 325 LDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 384

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D  V+  +RP+   YN L++    +G I+R  E+   ME      DD +YN L+ G C 
Sbjct: 385 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 444

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              V+EA  L +E+  +GI+P +VTYNTL  G       + AL++  EM          T
Sbjct: 445 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 504

Query: 370 YRTFIDGLC 378
           Y   I GLC
Sbjct: 505 YNALIQGLC 513



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 184/412 (44%), Gaps = 41/412 (9%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI----------------------GL 42
           H    P S  N+LL   A  + + T L L+ R+ S+                       L
Sbjct: 82  HLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL 141

Query: 43  FPDLY---------TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F D++         T++I++   C  G+ +        +LR    PN VT+ ++I G C+
Sbjct: 142 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCS 197

Query: 94  ESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
             R+  A  +  +++  G   PN  TY T+I+G C+ G    A+ +F EM    GE+   
Sbjct: 198 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV--- 253

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            KP  V Y+ +I G C +G +D A     +M    +   V TY  L+H         EA 
Sbjct: 254 -KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ EM  +G+  +V + N+++N  CK G +  A  + + M +  VR    TY +L+   
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 372

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G++    +LF      G + D   YN LIN +  +  ++ A  +  E+  K I P  
Sbjct: 373 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 432

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           VTYNTL  GL  + + + A KL  EM    +  D  TY T I G  ++  V+
Sbjct: 433 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T T++I++  LC  G   +A EL  QM      PN VTY ++I GFC       A  ++ 
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 217 EMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLD-LMVQCDVRPNAFTYNTLMDGFCL 274
           EM ++G + PN  +   +++  CK G++D A ++ D ++ + +V+P A  YN L+ G+C 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK++        M   G      +YN+L++    +    EA  L  E+  KG+   V T
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYAR 389
           YN L +G  +    ++AL++F  M    V A   TY + I  L  + QV+     F  A 
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 390 RKG 392
           R+G
Sbjct: 390 RRG 392


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 15/363 (4%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           SLF  + + GL P++  Y+ LI+ +CK G++   F ++  +     +PN  TFT+LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  +R+ EA  LF ++  +   PN +TYN LI G C+ G+T+ A  L  EM     E G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGL 561

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMKYENLN------PNVVTYTSLIHGFC 203
           V  P+T TY  +I GLC  G V +A+E    LQ + + LN      PNVVTYT+LI+G C
Sbjct: 562 V--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
                ++A+ L  EM+     PN  +    ++ L   G ++ A +L D++++     N  
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTV 678

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TYN L+ GFC  G+I    E+ V+M   G   D  SY+ +I  YC+  +++EA+ L+  +
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +G+ P  V YN L +G     +  +A +L  +M    V  +  TY + I G C+   V
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 798

Query: 384 RFT 386
             T
Sbjct: 799 SST 801



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + + +L  L + + +   L LF  + S GL PD+Y Y+ ++   C++        +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            GR+  S    +V T+   I+GLC   R+ EA  +   L   G   +V TY TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +      +EM N   E G  F P+    S ++DGL K+G +  A +L  ++K   +
Sbjct: 298 ----VEEFEAGEEMMNEMIEFG--FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y +LI+  C     +EA+ L   M  +G+ PN V+ +++++  CK GK+D A  
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M +  ++   + Y++L+ G C  GK+   K LF  M + G K +   Y  LI+GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  E+  A  LY+E+  KGI P   T+  L  GL    +   A KLF EM   +V  +  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 532 TYNVLIEGHC 541



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 198/420 (47%), Gaps = 40/420 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  + K+   D   SLF  +   GLFP+  TYSILI+ FCK G++ +    
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++        V  ++SLI G C   ++  A +LF ++ A G +PNV+ Y +LI+G C+
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 129 TGHTIVALNLFKEMT---------------------NGNGEIGVVFK--------PNTVT 159
            G    A  L+ EMT                     N   E   +F         PN VT
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I+G CKEG   +A EL  +M  + L P+  TY  LI G C     +EA+  + ++ 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 220 DQ--------GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            +        G  PNVV+   ++N LCK G MD A  L   M+  +  PN  TY   +D 
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652

Query: 272 FCLTGKINRVKELF-VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
               G I +  +L  V +E  G   +  +YNILI G+CK   ++EA  +   +   GI P
Sbjct: 653 LTSEGNIEKAIQLHDVLLE--GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
             ++Y+T+ +        + A+KL+  M    V  DT  Y   I G CV  ++   +  R
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 182/376 (48%), Gaps = 14/376 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+++N+ +  L KN+     + +   L+  GL  D+ TY  L+   CK+ +   G  +  
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   F P+    ++L+ GL  +  I  A  L  K+K FG  P++  YN LIN +C+ G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF  M    G  G+   PN VTYSI+ID  CK G +D A     +M    +  
Sbjct: 370 KLDEAESLFNNM----GHKGLF--PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            V  Y+SLI G C       AK L  EM+  G++PNVV    +++  CK G++ NA RL 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + PN +T+  L+ G C   ++    +LF  M       ++ +YN+LI G+CK 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG-----NDVAA 365
                A  L +E+  KG+ P   TY  L  GL    +   A +   ++QG     N++  
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603

Query: 366 ---DTCTYRTFIDGLC 378
              +  TY   I+GLC
Sbjct: 604 CLPNVVTYTALINGLC 619



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 6/311 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R C     + F  LI+      R ++   +   +   G  P + T + ++NGL R     
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           +AL+LF E+ +         +P+   Y+ ++  LC+     +A+E+  +M+    + +V 
Sbjct: 198 MALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY   I G C      EA  +   +  +G++ +V +   ++  LCK  + +    +++ M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++    P+    + L+DG    G I    +L   ++  G     F YN LIN  CK+ ++
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA SL+N +  KG+ P  VTY+ L     +  + + AL    +M    + A    Y + 
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 374 IDGLCVRPQVR 384
           I G C   ++R
Sbjct: 432 ISGHCKLGKLR 442



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 204 HANDWNEAKGLLIE--MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +  +  E  GL++   M+D G+ P + + + ++N L +  +   A  L D +V   +RP+
Sbjct: 155 YVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPD 214

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            + Y  ++   C      R +E+   MES GC     +YN+ I G CKN+ V EA+ + N
Sbjct: 215 VYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
            L +KG++  V TY TL  GL ++ + E   ++  EM               +DGL    
Sbjct: 275 LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL---- 330

Query: 382 QVRFTYARRKGNSGNT 397
                  R+KGN G+ 
Sbjct: 331 -------RKKGNIGSA 339


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 15/342 (4%)

Query: 9   PPVSSFNILL------GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V+++N L+      G      H D    L K +   G+ P   T+ +LIN +CK    
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  + +   A +VVT+ SLI GLC+E ++ E   L  +++  G  PN IT+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + G C+ G    A +    MT  N E      P+ V Y+I+IDG  + G ++ A  +   
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVE------PDVVIYTILIDGYRRLGKMEDAMAVKEA 394

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++PNV TY  LI GF  + DW  A GLL EM ++G++ +VV+ NV++  LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A +LLD M +  + PN  TYNT++ GFC  G I    E+   ME    + +  +YN+
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            I  +C+  +++EA  L NE+  K + P  +TY T+  G+ E
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 188/384 (48%), Gaps = 22/384 (5%)

Query: 5   HPS-PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP   P  SS N LL  L   K  D     F+      + PD+YT++ +I+  C++GQ+ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAES---RIVEAAALFTKLKAFGCEPNVITYN 120
               +   I     AP+V T+ SLI G C +     +     L  ++   G  P  +T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LING C+  +T  A+ +F+EM             + VTY+ +I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQG------IAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 181 LQMKYENLNPNVVTYTSLIHGFCH------ANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            +M+   L+PN +T+  ++ GFC       ANDW +       M ++ V+P+VV   +++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYTILI 376

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +   + GKM++A  + + M +  + PN  TYN L+ GF  +G       L   M+  G +
Sbjct: 377 DGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  +YN+LI   C   EV +A+ L +E+   G++P  +TYNT+  G  +    + A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M+     A+  TY  FI   C
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFC 520



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P   + + L+       +V L    F   LR   +P++ TF ++I GLC   ++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN---LFKEMTNGNGEIGVVFKPNTVTY 160
              +KA+G  P+V TYN+LI+G C+ G      +   L KEM     E G+   P  VT+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTF 267

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            ++I+G CK      A  +F +MK + +  +VVTY SLI G C      E   L+ EM D
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ PN ++   ++   CK G M +A+  +D M + +V P+   Y  L+DG+   GK+  
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +  +M   G   +  +YN LI G+ ++ +   A  L +E+  KGI+  VVTYN L  
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            L    +  +A+KL  EM    +  +  TY T I G C +  ++  Y  R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 182/382 (47%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FN ++  L +         + K + + GL P + TY+ LI+ +CK G     +  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++   ++ +  +P  VTF  LI G C  S    A  +F ++K  G   +V+TYN+LI+G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G     + L +EM +      +   PN +T+  ++ G CK+G +  A +    M  
Sbjct: 309 LCSEGKVEEGVKLMEEMED------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            N+ P+VV YT LI G+       +A  +   M  +G+ PNV + N ++    ++G   +
Sbjct: 363 RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS LLD M +  +  +  TYN L+   C  G++ +  +L   M  +G + +  +YN +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C    ++ A  +   +     +  VVTYN       +I + + A  L  EM    +  
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 366 DTCTYRTFIDGLCVR---PQVR 384
           +  TY T  +G+  +   P +R
Sbjct: 543 NGITYETIKEGMMEKGYTPDIR 564



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 6/280 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+  L      +  + L + +  +GL P+  T+  ++  FCK G ++       
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+VV +T LI G     ++ +A A+   +   G  PNV TYN LI G  R+G
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM     E G+  + + VTY+++I  LC +G V KA +L  +M    L P
Sbjct: 419 DWRSASGLLDEMK----EKGI--EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N +TY ++I GFC   +   A  +   M     + NVV+ NV +   C+ GKMD A+ LL
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           + M+   + PN  TY T+ +G    G    ++   VS  S
Sbjct: 533 NEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCTVSQAS 572



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 135/338 (39%), Gaps = 77/338 (22%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           + L+  L R    + A + F       GE     +P+T + + ++ GL     VD A++ 
Sbjct: 123 DMLVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKA 178

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCH----------AND---WNEA--------------- 211
           F       ++P++ T+ ++I G C           A D   W  A               
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 212 KG----------LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           KG          LL EMV+ G+ P  V+  V++N  CKN     A R+ + M Q  +  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKH----------- 295
             TYN+L+ G C  GK+    +L   ME +G               CK            
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 296 ---------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                    D   Y ILI+GY +  ++E+A+++   +  KGI P V TYN L  G     
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               A  L  EM+   + AD  TY   I  LC + +VR
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N L+   +++  + +   L   +   G+  D+ TY++LI   C  G+V     +
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN +T+ ++I+G C +  I  A  + T+++      NV+TYN  I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A +L  EM +          PN +TY  I +G+ ++G+    +   +    EN
Sbjct: 522 IGKMDEANDLLNEMLDK------CLVPNGITYETIKEGMMEKGYTPDIRGCTVSQASEN 574


>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
 gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 196/378 (51%), Gaps = 34/378 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H  P P  +    +L   +   ++YD V+SL + +   GL P+ YT +ILINCFCK+ 
Sbjct: 75  MLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNILINCFCKLQ 134

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V LGF +  ++++    P+VV FT+LI GLC   +  +A  LF +    G       YN
Sbjct: 135 HVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERG-------YN 187

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI+GLC       A  +  EMT+ N        P+ VT+++++D  CKEG V +A+ + 
Sbjct: 188 SLIHGLCNCSQWKEASAILNEMTSLN------IMPDIVTFNVLVDTFCKEGKVSEAQGVL 241

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M   ++  +VVTY SL++G     +  EA+ L   M+ +G +PNV S N+++N  CK 
Sbjct: 242 KTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKA 301

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             +D A +L + M+   + PN  +YNT   GFC  GK+   +EL  +M + G   D  +Y
Sbjct: 302 EMIDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTY 359

Query: 301 NILINGYCK-------------------NKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +IL++G+CK                    + ++EAL  + ++   G  P   +YN +  G
Sbjct: 360 SILLDGFCKQGNHIAARKLFSELFVQGLQRLLDEALETFRKMEEDGCPPNEWSYNVIIRG 419

Query: 342 LFEIRQAERALKLFVEMQ 359
               R   RA++L  EM+
Sbjct: 420 FLRHRDESRAVQLIGEMR 437



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 165/311 (53%), Gaps = 16/311 (5%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLC 127
           F  +L     P ++ FT L+  +    +  +A  +L   ++  G  PN  T N LIN  C
Sbjct: 72  FNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNILINCFC 131

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +  H  +  ++  ++      I +  +P+ V ++ +I+GLCK G   +A ELF +     
Sbjct: 132 KLQHVDLGFSVLAKV------IKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERG 185

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
                  Y SLIHG C+ + W EA  +L EM    + P++V+ NV+++  CK GK+  A 
Sbjct: 186 -------YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQ 238

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M +  V  +  TYN+LM G  L  ++   ++LF  M + GCK + FSYNILINGY
Sbjct: 239 GVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGY 298

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK + ++EA  L+NE+  +G+ P +V+YNT  HG  ++ +   A +L   M  N    D 
Sbjct: 299 CKAEMIDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDL 356

Query: 368 CTYRTFIDGLC 378
           CTY   +DG C
Sbjct: 357 CTYSILLDGFC 367



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + PN +T N L++ FC    ++    +   +  +G + D   +  LING CK  +  +A+
Sbjct: 116 LSPNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAV 175

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L++E   +G       YN+L HGL    Q + A  +  EM   ++  D  T+   +D  
Sbjct: 176 ELFDETVERG-------YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTF 228

Query: 378 CVRPQV 383
           C   +V
Sbjct: 229 CKEGKV 234


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 208/414 (50%), Gaps = 48/414 (11%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           V SFN +L  + +   ++  L  +  +    S+ + P+  T++++I   C++G V     
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191

Query: 68  IFGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +F  I LR+C AP+  T+++L+ GLC E RI EA +L  +++  G  PN++ +N LI+ L
Sbjct: 192 VFREIPLRNC-APDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISAL 250

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  L   M       G V  PN VTY+ ++ GLC +G ++KA  L  QM   
Sbjct: 251 CKKGDLGRAAKLVDNMFLK----GCV--PNEVTYNALVHGLCLKGKLEKAVSLLNQMVSN 304

Query: 187 NLNPNVVT-----------------------------------YTSLIHGFCHANDWNEA 211
              PN VT                                   Y+SLI G C    +N+A
Sbjct: 305 KCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQA 364

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L  EMV +G  PN +  + +++ LC+ GK+D A   L  M      PN+FTY++LM G
Sbjct: 365 MELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRG 424

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +   G  ++   ++  M +  C H++  Y+ILING CK+ +  EAL ++ ++  +GIK  
Sbjct: 425 YFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLD 484

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAADTCTYRTFIDGLCVRPQV 383
           VV Y+++ HG       E+ LKLF +M  QG  V  D  TY   ++  C++  +
Sbjct: 485 VVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSI 538



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 186/391 (47%), Gaps = 25/391 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L K +  D  +SL   +   G FP+L  +++LI+  CK G +     +
Sbjct: 203 PDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKL 262

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT+ +L+ GLC + ++ +A +L  ++ +  C PN +T+ TLING   
Sbjct: 263 VDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVM 322

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       +   +    G  G     N   YS +I GLCKEG  ++A EL+ +M  +  
Sbjct: 323 QGRASDGTRVLVSL-EARGHRG-----NEYVYSSLISGLCKEGKFNQAMELWKEMVGKGC 376

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN + Y++LI G C     +EA+G L EM ++G  PN  + + +M    + G    A  
Sbjct: 377 GPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAIL 436

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M   +   N   Y+ L++G C  GK      ++  M S G K D  +Y+ +I+G+C
Sbjct: 437 VWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFC 496

Query: 309 KNKEVEEALSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVA 364
               VE+ L L+N++  +G  ++P V+TYN L +     +   RA+ +   M  QG D  
Sbjct: 497 NANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556

Query: 365 ADTCTY---------------RTFIDGLCVR 380
             TC                 R F+D L VR
Sbjct: 557 FITCDIFLKTLRENMNPPQDGREFLDELVVR 587



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 148/281 (52%), Gaps = 4/281 (1%)

Query: 99  EAAALFTKLKA-FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           +A  LF ++   F C+  V ++N+++N + + G    AL  +  +        +   PN 
Sbjct: 114 KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKS---LNIHPNA 170

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           +T++++I  +C+ G VDKA E+F ++   N  P+  TY++L+HG C     +EA  LL E
Sbjct: 171 LTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDE 230

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G  PN+V+ NV+++ LCK G +  A++L+D M      PN  TYN L+ G CL GK
Sbjct: 231 MQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGK 290

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   L   M S  C  +D ++  LING+       +   +   L  +G +     Y++
Sbjct: 291 LEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSS 350

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  GL +  +  +A++L+ EM G     +T  Y   IDGLC
Sbjct: 351 LISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLC 391



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 29/283 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ L+  L K   ++  + L+K +   G  P+   YS LI+  C+ G++         + 
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
              + PN  T++SL++G        +A  ++ ++    C  N + Y+ LINGLC+ G  +
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN--LNPN 191
            AL ++K+M +         K + V YS +I G C    V++  +LF QM  +   + P+
Sbjct: 468 EALMVWKQMLSRG------IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPD 521

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN---------------- 235
           V+TY  L++ FC       A  +L  M+DQG  P+ ++ ++ +                 
Sbjct: 522 VITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFL 581

Query: 236 -----ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                 L K  +   AS+++++M+   + P A T+  ++   C
Sbjct: 582 DELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVC 624



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 4/225 (1%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           + ++     K    +KA +LF +M  E      V ++ S+++       +N A      +
Sbjct: 99  FIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHV 158

Query: 219 VDQ---GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           V      + PN ++ N+++  +C+ G +D A  +   +   +  P+ +TY+TLM G C  
Sbjct: 159 VASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKE 218

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            +I+    L   M+  G   +  ++N+LI+  CK  ++  A  L + +  KG  P  VTY
Sbjct: 219 ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY 278

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           N L HGL    + E+A+ L  +M  N    +  T+ T I+G  ++
Sbjct: 279 NALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQ 323



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFK---GIKPTVVTYNTLFHGLFEIRQAE 349
           CK    S+N ++N   +      AL  YN +       I P  +T+N +   +  +   +
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +A+++F E+   + A D  TY T + GLC   ++
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERI 221


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 195/396 (49%), Gaps = 29/396 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             +  +G  P++ +Y+ +I+ +   G +     I  
Sbjct: 227 VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 286

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+  T+ SLI G+C E R+ EA+ LF K+   G  PN +TYNTLI+G C  G
Sbjct: 287 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 346

Query: 131 HTIVALNLFKEMTNGN---------------------GEIGVVFK--------PNTVTYS 161
               A +   EM                         GE   + K        P+ +TY+
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+G  + G   KA +L  +M  + + P  VTYTSLI+     N   EA  L  +++DQ
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV P+V+  N +++  C NG ++ A  LL  M +  V P+  T+NTLM G C  GK+   
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           + L   M+  G K D  SYN LI+GY +  ++++A  + +E+   G  PT++TYN L   
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L + ++ + A +L  EM    ++ D  TY + I+G+
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L    K    +    L+  +  + +   +YT++I++N  CK G++      
Sbjct: 190 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +    F PNVV++ ++I G  +   I  A  +   ++  G EP+  TY +LI+G+C+
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF +M     EIG+V  PN VTY+ +IDG C +G +++A     +M  + +
Sbjct: 310 EGRLEEASGLFDKMV----EIGLV--PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY  L+H         EA  ++ EM  +G+ P+ ++ N+++N   + G    A  
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+   + P   TY +L+       ++    +LF  +   G   D   +N +++G+C
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  VE A  L  E+  K + P  VT+NTL  G     + E A  L  EM+   +  D  
Sbjct: 484 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 543

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   R  ++  +  R
Sbjct: 544 SYNTLISGYGRRGDIKDAFRVR 565



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 183/405 (45%), Gaps = 24/405 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL------NSIGLFPDL-------- 46
           + H+HP      S+ + +  LA+       L L K++       +  LF +L        
Sbjct: 94  IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLS 153

Query: 47  ----YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
                 + +L+   C++ +    F  F  +      P + T   ++      +R+  A  
Sbjct: 154 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 213

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L+ ++        V T+N ++N LC+ G    A      M       G+ FKPN V+Y+ 
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNT 267

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           II G    G ++ A+ +   M+ + + P+  TY SLI G C      EA GL  +MV+ G
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + PN V+ N +++  C  G ++ A    D MV+  + P+  TYN L+    + G++    
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 387

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++   M   G   D  +YNILINGY +    ++A  L+NE+  KGI+PT VTY +L + L
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
               + + A  LF ++    V+ D   +   +DG C    V   +
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 3/217 (1%)

Query: 177 KELF--LQMKYENLN-PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +ELF  L +  + L+  + + +  L+   C     +EA      M ++G+ P + + N +
Sbjct: 139 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 198

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++   K  +M+ A  L   M +  +    +T+N +++  C  GK+ + +E    ME +G 
Sbjct: 199 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 258

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K +  SYN +I+GY     +E A  + + +  KGI+P   TY +L  G+ +  + E A  
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 318

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           LF +M    +  +  TY T IDG C +  +   ++ R
Sbjct: 319 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN L+    +    +    L   +   G+ PD  +Y+ LI+ + + G +   F 
Sbjct: 504 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 563

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +   +L   F P ++T+ +LIK LC       A  L  ++   G  P+  TY +LI G+
Sbjct: 564 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 42/94 (44%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N L+    +         +   + SIG  P L TY+ LI C CK  +  L   +
Sbjct: 540 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 599

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
              ++    +P+  T+ SLI+G+     +VE  A
Sbjct: 600 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDNA 633


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 195/396 (49%), Gaps = 29/396 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             +  +G  P++ +Y+ +I+ +   G +     I  
Sbjct: 249 VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 308

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+  T+ SLI G+C E R+ EA+ LF K+   G  PN +TYNTLI+G C  G
Sbjct: 309 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 368

Query: 131 HTIVALNLFKEMTNGN---------------------GEIGVVFK--------PNTVTYS 161
               A +   EM                         GE   + K        P+ +TY+
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+G  + G   KA +L  +M  + + P  VTYTSLI+     N   EA  L  +++DQ
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV P+V+  N +++  C NG ++ A  LL  M +  V P+  T+NTLM G C  GK+   
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           + L   M+  G K D  SYN LI+GY +  ++++A  + +E+   G  PT++TYN L   
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L + ++ + A +L  EM    ++ D  TY + I+G+
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 6/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L    K    +    L+  +  + +   +YT++I++N  CK G++      
Sbjct: 212 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 271

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +    F PNVV++ ++I G  +   I  A  +   ++  G EP+  TY +LI+G+C+
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LF +M     EIG+V  PN VTY+ +IDG C +G +++A     +M  + +
Sbjct: 332 EGRLEEASGLFDKMV----EIGLV--PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY  L+H         EA  ++ EM  +G+ P+ ++ N+++N   + G    A  
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 445

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+   + P   TY +L+       ++    +LF  +   G   D   +N +++G+C
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 505

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  VE A  L  E+  K + P  VT+NTL  G     + E A  L  EM+   +  D  
Sbjct: 506 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 565

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   R  ++  +  R
Sbjct: 566 SYNTLISGYGRRGDIKDAFRVR 587



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 183/405 (45%), Gaps = 24/405 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL------NSIGLFPDL-------- 46
           + H+HP      S+ + +  LA+       L L K++       +  LF +L        
Sbjct: 116 IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLS 175

Query: 47  ----YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
                 + +L+   C++ +    F  F  +      P + T   ++      +R+  A  
Sbjct: 176 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 235

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L+ ++        V T+N ++N LC+ G    A      M       G+ FKPN V+Y+ 
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNT 289

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           II G    G ++ A+ +   M+ + + P+  TY SLI G C      EA GL  +MV+ G
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + PN V+ N +++  C  G ++ A    D MV+  + P+  TYN L+    + G++    
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 409

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++   M   G   D  +YNILINGY +    ++A  L+NE+  KGI+PT VTY +L + L
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
               + + A  LF ++    V+ D   +   +DG C    V   +
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 3/217 (1%)

Query: 177 KELF--LQMKYENLN-PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +ELF  L +  + L+  + + +  L+   C     +EA      M ++G+ P + + N +
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 220

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++   K  +M+ A  L   M +  +    +T+N +++  C  GK+ + +E    ME +G 
Sbjct: 221 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 280

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K +  SYN +I+GY     +E A  + + +  KGI+P   TY +L  G+ +  + E A  
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 340

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           LF +M    +  +  TY T IDG C +  +   ++ R
Sbjct: 341 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN L+    +    +    L   +   G+ PD  +Y+ LI+ + + G +   F 
Sbjct: 526 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 585

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +   +L   F P ++T+ +LIK LC       A  L  ++   G  P+  TY +LI G+
Sbjct: 586 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 42/94 (44%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N L+    +         +   + SIG  P L TY+ LI C CK  +  L   +
Sbjct: 562 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 621

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
              ++    +P+  T+ SLI+G+     +VE  A
Sbjct: 622 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDNA 655


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 194/379 (51%), Gaps = 30/379 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    + +++G L K    D   S F+R+   G  PD  TY++L++   K  +   G  I
Sbjct: 120 PDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI 179

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    +P +VT+ +++ G C   RI +A +L  +LK  G  P+   Y+TLI+GLC+
Sbjct: 180 FEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 239

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF----------------------------KPNTVTY 160
                 A  LF EM  G+ +  +V+                             P+ V+Y
Sbjct: 240 HDRHDEARELF-EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           ++II  LCK+  V +AKEL  Q       P V   T L+ G C +    EA  +L  M++
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358

Query: 221 QGVQ-PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            G + P+VV+ + +++ LCK  ++D+A  +L  M +    P+  TY  ++D FC  G+++
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 418

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +ELF  M   GC  D  +YNILI GYC+  +V+EA+++  E+  +GI+P VV+ +T+ 
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478

Query: 340 HGLFEIRQAERALKLFVEM 358
            GL +  + E A  L  +M
Sbjct: 479 DGLCKESRVEEARLLMEKM 497



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 199/411 (48%), Gaps = 44/411 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L +    D  L +F ++  + + PD + Y+++I   CK+ ++ L    
Sbjct: 85  PTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 144

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++S   P+ VT+T L+  L    +  +   +F ++ + G  P ++TY T++NG C+
Sbjct: 145 FERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 204

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L + +  G G       P+   YS +IDGLCK    D+A+ELF +M   ++
Sbjct: 205 AGRIDQALSLMRRL-KGTGR-----SPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDV 257

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V+ YTS I G C A   +EAK + ++M++ G  P+ VS NVI+  LCK+ ++  A  
Sbjct: 258 Q-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 249 LLDLMVQ-----------------CDVR-------------------PNAFTYNTLMDGF 272
           L+D  ++                 C  R                   P+  TY+ ++DG 
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +++    +   M   GC  D  +Y  +I+ +CK   ++EA  L+  +  +G    V
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           V YN L  G     + + A+ +  EM G  +  +  +  T +DGLC   +V
Sbjct: 437 VAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRV 487



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 171/391 (43%), Gaps = 45/391 (11%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   + YT + L+  F   G     + +F   L + F P+  T+ +LI+G C   +I +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  ++KA G  P ++T+ +LI  LC    T  AL +F +M      I +  KP+   Y
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM------IDMKVKPDAFLY 125

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +++I  LCK   +D A   F +M      P+ VTYT L+H    A  W +   +  EM+ 
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD---------- 270
           +G  P +V+   ++N  CK G++D A  L+  +      P+   Y+TL+D          
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 271 -----------------------GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
                                  G C  GK++  K + V M   GC  D  SYN++I   
Sbjct: 246 ARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAAD 366
           CK+  V EA  L ++   +   P V     L  GL + R+ E A  +   M +  D A  
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPS 365

Query: 367 TCTYRTFIDGLCVRPQVRFTYA-----RRKG 392
             TY   IDGLC   ++   Y      RR G
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAG 396


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 196/377 (51%), Gaps = 9/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++    K  + +       ++   GL PD +TY+ LI  +C+   +   F +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  + L+ C   N V +T LI GLC   RI EA  LF K+K   C P V TY  LI  LC
Sbjct: 276 FNEMPLKGC-RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            +     ALNL KEM     E G+  KPN  TY+++ID LC +   +KA+EL  QM  + 
Sbjct: 335 GSERKSEALNLVKEME----ETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNV+TY +LI+G+C      +A  ++  M  + + PN  + N ++   CK+  +  A 
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+ M++  V P+  TYN+L+DG C +G  +    L   M   G   D ++Y  +I+  
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+K VEEA  L++ L  KG+ P VV Y  L  G  +  + + A  +  +M   +   ++
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567

Query: 368 CTYRTFIDGLCVRPQVR 384
            T+   I GLC   +++
Sbjct: 568 LTFNALIHGLCADGKLK 584



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 12/385 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +L+  L     ++    L  ++   GL P++ TY+ LIN +CK G +     +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +PN  T+  LIKG C +S + +A  +  K+      P+V+TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   A  L   M +     G+V  P+  TY+ +ID LCK   V++A +LF  ++ + +
Sbjct: 475 SGNFDSAYRLLSLMNDR----GLV--PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPNVV YT+LI G+C A   +EA  +L +M+ +   PN ++ N +++ LC +GK+  A+ 
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + MV+  ++P   T   L+      G  +     F  M S G K D  +Y   I  YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + +A  +  ++   G+ P + TY++L  G  ++ Q   A  +   M+         
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 369 TYRTFIDGLCVRPQVRFTYARRKGN 393
           T+ + I  L     +   Y ++KG+
Sbjct: 709 TFLSLIKHL-----LEMKYGKQKGS 728



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 178/360 (49%), Gaps = 12/360 (3%)

Query: 30  VLSLFKRLNSIGLFPDLYT-----YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           VL L +++N    F   Y      Y+ L+N   + G V     ++  +L     PN+ T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             ++ G C    + EA    +K+   G +P+  TY +LI G C+      A  +F EM  
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    + N V Y+ +I GLC    +D+A +LF++MK +   P V TYT LI   C 
Sbjct: 282 KG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           +   +EA  L+ EM + G++PN+ +  V+++ LC   K + A  LL  M++  + PN  T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YN L++G+C  G I    ++   MES     +  +YN LI GYCK+  V +A+ + N++ 
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + P VVTYN+L  G       + A +L   M    +  D  TY + ID LC   +V 
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 25/388 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++  L K+K  +    LF  L   G+ P++  Y+ LI+ +CK G+V    ++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     PN +TF +LI GLCA+ ++ EA  L  K+   G +P V T   LI+ L +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A + F++M +         KP+  TY+  I   C+EG +  A+++  +M+   +
Sbjct: 615 DGDFDHAYSRFQQMLSSGT------KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN------VVSSNVIMN------- 235
           +P++ TY+SLI G+      N A  +L  M D G +P+      ++   + M        
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728

Query: 236 --ELCKNGKM---DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME- 289
             ELC    M   D    LL+ MV+  V PNA +Y  L+ G C  G +   +++F  M+ 
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G    +  +N L++  CK K+  EA  + +++   G  P + +   L  GL++  + E
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGL 377
           R   +F  +       D   ++  IDG+
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGV 876



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 157/368 (42%), Gaps = 52/368 (14%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           +Y+Y+ L+      G V + F I   +++SC   + V     +  LC +    E   L  
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           KL   GC      YNTL+N L R G       ++ EM            PN  TY+ +++
Sbjct: 180 KL-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK------VCPNIYTYNKMVN 226

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW----------------- 208
           G CK G V++A +   ++    L+P+  TYTSLI G+C   D                  
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286

Query: 209 ------------------NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
                             +EA  L ++M D    P V +  V++  LC + +   A  L+
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++PN  TY  L+D  C   K  + +EL   M   G   +  +YN LINGYCK 
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A+ +   +  + + P   TYN L  G  +     +A+ +  +M    V  D  TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY 465

Query: 371 RTFIDGLC 378
            + IDG C
Sbjct: 466 NSLIDGQC 473



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 1/263 (0%)

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I      G  +  L+L ++M N +    + +K     Y+ +++ L + G VD+ K++++
Sbjct: 149 MIKSCDSVGDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  + + PN+ TY  +++G+C   +  EA   + ++V+ G+ P+  +   ++   C+  
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D+A ++ + M     R N   Y  L+ G C+  +I+   +LFV M+   C     +Y 
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           +LI   C ++   EAL+L  E+   GIKP + TY  L   L    + E+A +L  +M   
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387

Query: 362 DVAADTCTYRTFIDGLCVRPQVR 384
            +  +  TY   I+G C R  + 
Sbjct: 388 GLMPNVITYNALINGYCKRGMIE 410



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 25/352 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L  +        L +++  IGL P + T +ILI+   K G     +  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L S   P+  T+T+ I+  C E R+++A  +  K++  G  P++ TY++LI G   
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
            G T  A ++ K M +   E      P+  T+  +I  L +  +                
Sbjct: 685 LGQTNFAFDVLKRMRDTGCE------PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738

Query: 173 --VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVS 229
              D   EL  +M   ++ PN  +Y  LI G C   +   A+ +   M  ++G+ P+ + 
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N +++  CK  K + A++++D M+     P   +   L+ G    G+  R   +F ++ 
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             G   D+ ++ I+I+G  K   VE    L+N +   G K +  TY+ L  G
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L      +    LF+ +  +G+ PD+YTY+ILI+ FCK G +     +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P VVT+T+LI       ++ +A  +F ++   GC PN +TY  L++GLC+
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVF--------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G+   A  ++ ++  T+ + +    F         PN VTY  ++DGLCK   VD A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC A   + A+ + ++M   G  P+V +   +++ + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M++    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K  +++ +L L+ ++  KG  P  VTY  L + L      ++A  L  EM
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +          YR  I G 
Sbjct: 646 KQTYWPKYLQGYRCAIQGF 664



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    L K +   G  PD  TYS +I   C   +V   F++F  +      P
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A  LF ++++ GC P V+TY  LI+   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M +         +PN VTY  ++DGLCK G + KA E++ ++                
Sbjct: 382 HRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L PNVVTY +L+ G C A+  + A  LL  M+  G +PN +  + +++  CK GK+
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A  +   M +C   P+  TY +L+D     G+++   ++   M    C  +  +Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G C+  E E+AL L + +  KG  P VVTY  L  GL +  + + +L LF +M     
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 364 AADTCTYRTFIDGLCV 379
           + +  TYR  I+ LC 
Sbjct: 616 SPNYVTYRVLINHLCA 631



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 188/426 (44%), Gaps = 80/426 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       +F R+   G  P+  TY  L++  CK G +S  F +
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 69  FGRIL----------------RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++                R   APNVVT+ +L+ GLC   ++  A  L   + + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ LI+G C+ G    A  +F +MT                    +G + +  K
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ +IDGLC+ G  +KA +L   M+ +  +PNVVTYT+LI G  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------- 255
            A   + +  L  +M  +G  PN V+  V++N LC  G +D A  LL  M Q        
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 256 ---CDVR----------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              C ++                      P A  Y  L+D F   G++    EL   M  
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 291 M--GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +    K D+  Y  LI   C   +VEEA  LY+E+  +G  P +  +  L  GL E+++ 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 349 ERALKL 354
           + AL+L
Sbjct: 776 DEALQL 781



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 186/444 (41%), Gaps = 86/444 (19%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L +  ++D  +S   R+      P++ TY  L++ F K  Q+     I   ++     PN
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI------V 134
              F SL+   C E     A  L  ++   GC P  + YN  I  +C            +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 236

Query: 135 ALNLFKEMTNGNGEIGVV-----------------------------FKPNTVTYS---- 161
           A  ++ EM   N  +  V                             F P+T TYS    
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 162 -------------------------------IIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                                          I+ID  CK G +++A+ LF +M+    +P
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
            VVTYT+LIH +  A    +A  +   MVD G +PN V+   +++ LCK G +  A    
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 416

Query: 247 SRLL--------DLMVQCDVR----PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           ++L+        D    C+ R    PN  TY  L+DG C   K++   EL  +M S GC+
Sbjct: 417 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 476

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   Y+ LI+G+CK  +++ A  ++ ++   G  P+V TY +L   +F+  + + A+K+
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
             +M  +    +  TY   IDGLC
Sbjct: 537 LSQMLKDSCTPNVVTYTAMIDGLC 560



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 143/353 (40%), Gaps = 15/353 (4%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L   G  P   TY+ L+      GQV LGF +   +  S F  +  T       LC E R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
             +A  +  + + F  +  + T+  +I+GL    +   A++    M   N  I     PN
Sbjct: 91  WADALDMIER-EDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRM-RCNSCI-----PN 141

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY  ++ G  K+  +   K +   M  E  NPN   + SL+H +C+  D+  A  LL 
Sbjct: 142 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLN 201

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKM------DNASRLLDLMVQCDVRPNAFTYNTLMD 270
            M   G  P  V  N+ +  +C   K+      D A ++   M+  +   N         
Sbjct: 202 RMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFAR 261

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  GK ++  +L   M   G   D  +Y+ +I   C   +VE+A  L+ E+   G+ P
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            V TY  L     +    E+A  LF EM+    +    TY   I       QV
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 6/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K    D  L LF +++  G  P+  TY +LIN  C  G +    ++
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + ++ +   +  +   I+G       + +  +  +++++G  P    Y  LI+   +
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A+ L KEM     E+    K +   Y+ +I  LC    V++A  L+ +M     
Sbjct: 700 AGRLEIAMELHKEMM----EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGF 755

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            P +  +  LI G      W+EA  L   +  +GV
Sbjct: 756 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 194/365 (53%), Gaps = 8/365 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +  +LL  LAK++  D V  ++K++  IG+  +++ Y++LI+  CK G V     +
Sbjct: 163 PHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNL 222

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +   C  P++ T+ +LI   C +    EA ++  +++  G +P+++TYN+LI+G C+
Sbjct: 223 LSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCK 282

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LFKE+ +          PN VTY+ +IDG C+   +D+A  L  +M+ + L
Sbjct: 283 EGRMREAMRLFKEIRDAT--------PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGL 334

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY S++   C      +A  LL EM ++ ++P+ V+ N ++N  CK G M +A +
Sbjct: 335 YPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALK 394

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + MV+  ++ + FTY  L+ GFC   +++  KEL +SM   G      +Y+ L++GYC
Sbjct: 395 VKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYC 454

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +  E  L L +E   KG+      Y  L     +  Q + A K+F  MQ      D+ 
Sbjct: 455 NQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSV 514

Query: 369 TYRTF 373
            Y + 
Sbjct: 515 IYTSL 519



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 201/400 (50%), Gaps = 14/400 (3%)

Query: 4   MHPSPPPVSS-FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P   S  F+ L+   A  K     + +F+ +   G  P L+  ++L+N   K    
Sbjct: 122 LHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLT 181

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            + + ++ ++ R     N+  +  LI   C    + +A  L +++++    P++ TYNTL
Sbjct: 182 DMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTL 241

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+  C+ G    AL++   M           KP+ VTY+ +I G CKEG + +A  LF +
Sbjct: 242 ISLYCKKGMHYEALSVQDRMEREG------IKPDIVTYNSLIHGFCKEGRMREAMRLFKE 295

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           ++  +  PN VTYT+LI G+C  ND ++A  L  EM  QG+ P VV+ N I+ +LC+ G+
Sbjct: 296 IR--DATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGR 353

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A++LL+ M +  + P+  T NTL++ +C  G +    ++   M   G K D F+Y  
Sbjct: 354 IRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKA 413

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G+CK +E++ A  L   +   G  P+  TY+ L  G    +  E  LKL  E     
Sbjct: 414 LIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKG 473

Query: 363 VAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
           +  D   YR  I   C R QV      F+  + KG  G++
Sbjct: 474 LCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDS 513



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 163/363 (44%), Gaps = 43/363 (11%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  +N+L+    K+   +   +L   + S  +FPDL+TY+ LI+ +CK G       +  
Sbjct: 200 IHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQD 259

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R+ R    P++VT+ SLI G C E R+ EA  LF +++     PN +TY TLI+G CR  
Sbjct: 260 RMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTLIDGYCRLN 317

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L +EM    G       P  VTY+ I+  LC+ G +  A +L  +M  + + P
Sbjct: 318 DLDQALRLREEM-EAQG-----LYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEP 371

Query: 191 NVVT-----------------------------------YTSLIHGFCHANDWNEAKGLL 215
           + VT                                   Y +LIHGFC   + + AK LL
Sbjct: 372 DNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELL 431

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + M+D G  P+  + + +++  C     +   +L D  V+  +  +   Y  L+  FC  
Sbjct: 432 LSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKR 491

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            +++  K++F  M+  G   D   Y  L   Y K  +   A  L +E+  + +  T+  Y
Sbjct: 492 EQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIY 551

Query: 336 NTL 338
             L
Sbjct: 552 RAL 554



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 6/254 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           + +  + P   ++  L+    +    D  L L + + + GL+P + TY+ ++   C++G+
Sbjct: 294 KEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGR 353

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +     +   +      P+ VT  +LI   C    +  A  +  ++   G + +  TY  
Sbjct: 354 IRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKA 413

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+      A  L   M +        F P+  TYS ++DG C +   +   +L  
Sbjct: 414 LIHGFCKIREMDGAKELLLSMLDAG------FSPSYCTYSWLVDGYCNQQNEEAVLKLPD 467

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +   + L  +   Y +LI  FC     + AK +   M ++G   + V    +     K G
Sbjct: 468 EFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLG 527

Query: 242 KMDNASRLLDLMVQ 255
           K + AS LLD M +
Sbjct: 528 KANAASDLLDEMYK 541


>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
          Length = 458

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 190/384 (49%), Gaps = 37/384 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFV 67
           + SFN  L  +A++     V SLF R+   G   + PDL TYSILI C C+ G++ LGF 
Sbjct: 58  IYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFA 116

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGL 126
             G +++  F    +TF  L+KGLCA+ R  +A  +   ++    C P+V +   L+ GL
Sbjct: 117 ALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 176

Query: 127 CRTGHTIVALNLFKEMTNGNGE--------------------------------IGVVFK 154
           C    +  AL L   M +  G                                 +G    
Sbjct: 177 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRIS 236

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN VTYS II  LCK   +DKA E+   M    + P+ +TY+S++HG+C +    E  G 
Sbjct: 237 PNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGT 296

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +M   GV+PNVV+   +MN LCKNG+   A ++ D M +  + P+  TY TL+ G+  
Sbjct: 297 LNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYAT 356

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +  +  L   M   G + D   +NILI  Y K ++V++A+ +++++   G+ P VV 
Sbjct: 357 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416

Query: 335 YNTLFHGLFEIRQAERALKLFVEM 358
           Y T+   L +    + A+  F +M
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFEQM 440



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 9/287 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P V S  ILL  L         L L   +      G  PD+ +Y+ +IN F K G     
Sbjct: 164 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 223

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +  +  +L    +PNVVT++S+I  LC    + +A  +   +   G  P+ +TY+++++G
Sbjct: 224 YSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHG 283

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C +G     +    +M +   E      PN VTY  +++ LCK G   KA+++F  M  
Sbjct: 284 YCSSGQPKEDIGTLNKMRSDGVE------PNVVTYRSLMNYLCKNGRCTKARKIFDSMTK 337

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P++ TY +L+ G+       E   LL  MV  G+QP+    N+++    K  K+D 
Sbjct: 338 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 397

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           A  +   M Q  + PN   Y T++D  C +G ++     F  M   G
Sbjct: 398 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 444



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 15/296 (5%)

Query: 93  AESRIVEAAALFTKLKAFGCE---PNVITYNTLINGLCRTGHTIVALNL-FKEMTNGNGE 148
           A      A +LF ++   G +   P++ TY+ LI   CR G     L+L F  + N    
Sbjct: 69  ARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGR----LDLGFAALGN---V 121

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHAND 207
           I   F+   +T++ ++ GLC +     A ++ L+   E +  P+V + T L+ G C  N 
Sbjct: 122 IKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENR 181

Query: 208 WNEAKGLLIEMVDQ---GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             EA  LL  M D    G  P+VVS   ++N   K G  D A      M+   + PN  T
Sbjct: 182 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVT 241

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y++++   C    +++  E+  +M   G   D  +Y+ +++GYC + + +E +   N++ 
Sbjct: 242 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMR 301

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             G++P VVTY +L + L +  +  +A K+F  M    +  D  TYRT + G   +
Sbjct: 302 SDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATK 357



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V S+  ++    K    D   S +  +    + P++ TYS +I   CK   +    
Sbjct: 200 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAM 259

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++++   P+ +T++S++ G C+  +  E      K+++ G EPNV+TY +L+N L
Sbjct: 260 EVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYL 319

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  +F  MT          +P+  TY  ++ G   +G + +   L   M   
Sbjct: 320 CKNGRCTKARKIFDSMTKRG------LEPDIATYRTLLQGYATKGALVEMHALLDLMVRN 373

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+   +  LI  +      ++A  +  +M   G+ PNVV    +++ LCK+G +D+A
Sbjct: 374 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 433

Query: 247 SRLLDLMVQCDVRPN 261
               + M+   + PN
Sbjct: 434 MLYFEQMIDEGLTPN 448



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 6/222 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K +  D  + +   +   G+ PD  TYS +++ +C  GQ       
Sbjct: 237 PNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGT 296

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PNVVT+ SL+  LC   R  +A  +F  +   G EP++ TY TL+ G   
Sbjct: 297 LNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYAT 356

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +V ++   ++   NG      +P+   ++I+I    K+  VD+A  +F +M+   L
Sbjct: 357 KG-ALVEMHALLDLMVRNG-----IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           NPNVV Y ++I   C +   ++A     +M+D+G+ PN++ S
Sbjct: 411 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIILS 452


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 191/378 (50%), Gaps = 10/378 (2%)

Query: 5   HPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP   P + S N LL  L   +  D     FK      + PDL+T++I+I+  CK GQ+ 
Sbjct: 143 HPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLR 202

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR---IVEAAALFTKLKAFGCEPNVITYN 120
               +   I     AP+VVT+ ++I G C   R   +    AL  ++   G  PN +T+N
Sbjct: 203 KAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFN 262

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L+NG C+  +T  A+ +F+EM             + VTYS ++ GLC EG V++  +L 
Sbjct: 263 VLVNGYCKDSNTAAAVRVFEEMKQQG------IAASVVTYSALVWGLCSEGKVEEGVKLV 316

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +MK   L PN+ T  S+++GFC      +A+G +  M  + V+PNVV+  ++++   + 
Sbjct: 317 DEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRL 376

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            KM +A  + + M    VRPNA  YN L+ GF   G    V  L   M   G + D  +Y
Sbjct: 377 DKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTY 436

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N+LI   C   EV +A+ L +E+   G++P  +TYNT+ +G  E    + A ++   M+ 
Sbjct: 437 NVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496

Query: 361 NDVAADTCTYRTFIDGLC 378
               A+  TY  FI  LC
Sbjct: 497 GKKRANVVTYNVFIKCLC 514



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 180/350 (51%), Gaps = 9/350 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P  ++ + L++      +V L    F   LR   +P++ TF  +I GLC   ++ +A  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 104 FTKLKAFGCEPNVITYNTLINGLC---RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              ++A+G  P+V+TYNT+I+G C   R G       L KEM     E G+   PN VT+
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV----EAGI--SPNEVTF 261

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +++++G CK+     A  +F +MK + +  +VVTY++L+ G C      E   L+ EM D
Sbjct: 262 NVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKD 321

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ PN+ + N ++N  CK G M +A   +D M Q +V+PN  TY  L+DG+    K+  
Sbjct: 322 LGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKD 381

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +  +M   G + +   YN LI G+ +N +      L +E+  KG++  +VTYN L  
Sbjct: 382 ALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIG 441

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            L    +  +A+KL  EM    +     TY T I+G C +  ++  Y  R
Sbjct: 442 ALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIR 491



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FNI++  L K         + K + + GL P + TY+ +I+ +CK G+    +  
Sbjct: 183 PDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHV 242

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++ +  +PN VTF  L+ G C +S    A  +F ++K  G   +V+TY+ L+ G
Sbjct: 243 DALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWG 302

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G     + L  EM +    +G+V  PN  T + +++G CK+G +  A+     M+ 
Sbjct: 303 LCSEGKVEEGVKLVDEMKD----LGLV--PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQ 356

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +N+ PNVVTYT L+ G+   +   +A  +   M  +GV+PN    N ++    +NG   +
Sbjct: 357 KNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRS 416

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            S LLD M    VR +  TYN L+   C+ G++ +  +L   M  +G +    +YN +IN
Sbjct: 417 VSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIIN 476

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYC+   ++ A  +   +     +  VVTYN     L  + + E   +L  EM    +  
Sbjct: 477 GYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVP 536

Query: 366 DTCTYRTFIDGLCVR---PQVR 384
           +  TY T  +G+  +   P VR
Sbjct: 537 NGVTYDTIKEGMMEKGYTPDVR 558



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 3/249 (1%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P+  + + ++  L     VD A+  F       ++P++ T+  +I G C      +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKN---GKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           +  ++   G+ P+VV+ N I++  CK    G+M +   LL  MV+  + PN  T+N L++
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+C          +F  M+  G      +Y+ L+ G C   +VEE + L +E+   G+ P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            + T N++ +G  +      A      M+  +V  +  TY   +DG     +++   A +
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 391 KGNSGNTNR 399
           +  SG   R
Sbjct: 387 EAMSGKGVR 395


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 39/408 (9%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++FNI+L  L         L L +++ S    P+  TY+ +I  FC  G+V  G  
Sbjct: 113 PLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIE 168

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLING 125
           I   +  R   AP+  T+ ++I G C   ++ +A  +F ++   G  EPN + YN LI G
Sbjct: 169 IMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGG 228

Query: 126 LCRTGHTIVALNLFKEMTNGN-------------------------------GEIGVVFK 154
            C  G+  VAL    EM +                                 GE G+   
Sbjct: 229 YCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLA-- 286

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+  TY+I+I+G CKEG   KA ++F  M  + +   VVTYTSLIH         E   L
Sbjct: 287 PDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRL 346

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             + V +G++P++   N ++N  C  G MD A  ++  M +  + P+  TYNTLM G CL
Sbjct: 347 FNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCL 406

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+++  + L   M   G + D  SYN LI+GY    ++++A+ + +E+  KG  PT++T
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           YN +  GL    Q   A  L  EM GN +  D  TY + I+GL    +
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 193/419 (46%), Gaps = 54/419 (12%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQ 61
           H+  +P   S  ++LL      + + T LSL+ RL S+ L  P    + +L +       
Sbjct: 45  HLAATP---SLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSL-----P 96

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
            +  FV+F  I R     +  TF  +++ LC   + V A  L  ++ +    PN +TYNT
Sbjct: 97  PAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNT 152

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I G C  G     + + +EM    G       P+  TY+ +I G CK G V+ A ++F 
Sbjct: 153 VIAGFCARGRVQAGIEIMREMRERGG-----IAPDKYTYATVISGWCKVGKVEDATKVFD 207

Query: 182 QMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           +M  E  + PN V Y +LI G+C   +   A     EMVD+GV   V + N+ ++ L   
Sbjct: 208 EMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFME 267

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF--------------- 285
           G+   A  L++ M +  + P+AFTYN L++G+C  GK  +  ++F               
Sbjct: 268 GRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTY 327

Query: 286 ------VSMESM--------------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
                 +SM+ M              G + D F YN LIN +C   +++ A  +  E+  
Sbjct: 328 TSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEK 387

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           K I P  VTYNTL  GL  + + + A  L  EM    +  D  +Y T I G  ++  ++
Sbjct: 388 KRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIK 446



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L      D    L + +   G+ PDL +Y+ LI+ +   G +     +
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++   F P ++T+ ++IKGLC   +  +A  L  ++   G  P+  TY +LI GL  
Sbjct: 452 RDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTT 511

Query: 129 TGHTIVA 135
               + A
Sbjct: 512 EDERLAA 518


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 201/410 (49%), Gaps = 43/410 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN LL  L K K Y+ V+SL+  L S   + P L T+SILIN F ++GQ+   F + G I
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+  F  +V   T+L+KGLC + R++EA +L  +    G   + + Y T+INGLC+ G T
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ +F +M        +   PN + Y+ +IDGLCK+G VD+A  L  +M    +  +V
Sbjct: 192 RDAIQMFPKMKK------IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDV 245

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMV--------------------------------- 219
            +Y S+IHGFC    +  A  LL EMV                                 
Sbjct: 246 YSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVA 305

Query: 220 ---DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
               +G +P++VS N +MN  C +G +  A ++ D MV+    PN  +Y TL++G+C   
Sbjct: 306 VMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR 365

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            ++    L   M +     D  +YN L++G  K+        L   +   G    ++TYN
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYN 425

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            L    F+  + ++AL LF  +    ++ +  TY   +DGLC   ++++ 
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+++T++ LI+ F        A  LL  ++  G Q +V     +M  LC  G++  A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL   V    R +   Y T+++G C  GK     ++F  M+ +    +   YN +I+G 
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVAAD 366
           CK   V+EA  L  E+   GI+  V +YN++ HG   + + + A+KL  EM     V  D
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 367 TCTYRTFIDGLCVRPQVRFTY 387
             T+   IDGLC   +V   Y
Sbjct: 281 VYTFNILIDGLCKLGRVSEAY 301



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 6/159 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N LL  L+K+        L + + + G   DL TY++L++ + K  +      +
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  I+    +PN+ T+  L+ GLC   R+  A  +F  L A GC+PN+ TYN +I+GLC+
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G    A  L  +M N N      + PN +T+  I+  +
Sbjct: 504 EGFLDEAEALLYKMVNNN------YLPNYITFDTIVRAI 536



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P  + ++N+LL    K++ +D  L+LF+ +  IG+ P++ TY+IL++  CK G++    
Sbjct: 417 QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAK 476

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF  +      PN+ T+  +I GLC E  + EA AL  K+      PN IT++T++  +
Sbjct: 477 EIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 177/343 (51%), Gaps = 8/343 (2%)

Query: 37  LNSIGLFP--DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAE 94
           +N   LFP   L  +S  +   CK   V     +   +      P+VVT+  LI G+C E
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
            R+ EA      + ++GC+PNVIT+N ++  +C TG  + A  L  +M            
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS------ 184

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ VT++I+I+ LC++G + +A ++  +M      PN ++Y  L+HGFC     + A   
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L  MV +G  P++V+ N ++  LCK+GK+D A  +L+ +      P   TYNT++DG   
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            GK  R  +L   M   G K D  +Y+ L++G  +  +V+EA+  +++L   GI+P  +T
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YN++  GL + RQ +RA+     M          TY   I+G+
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 407



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +S F+  +    K       + L   + + G  PD+ TY++LIN  CK G++        
Sbjct: 82  LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PNV+T   +++ +C+  R ++A  L + +   GC P+V+T+N LIN LCR G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+++ ++M            PN+++Y+ ++ G CKE  +D+A E    M      P
Sbjct: 202 LLGRAIDILEKMPMHG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 255

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++VTY +L+   C     + A  +L ++  +G  P +++ N +++ L K GK + A +LL
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M +  ++P+  TY++L+ G    GK++   + F  +E +G + +  +YN ++ G CK+
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++ + A+     +  K  KPT  TY  L  G+     A+ AL L  E+
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 8/313 (2%)

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           + L  CF+  +  F+  ++  C ES + +A  L  +++  G +P+V+TYN LING+C+ G
Sbjct: 74  QTLFPCFS--LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 131

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+     M +   +      PN +T++II+  +C  G    A++L   M  +  +P
Sbjct: 132 RLDEAIKFLNNMPSYGCQ------PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 185

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT+  LI+  C       A  +L +M   G  PN +S N +++  CK  KMD A   L
Sbjct: 186 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 245

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D+MV     P+  TYNTL+   C  GK++   E+   + S GC     +YN +I+G  K 
Sbjct: 246 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 305

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + E A+ L +E+  KG+KP ++TY++L  GL    + + A+K F +++G  +  +  TY
Sbjct: 306 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 365

Query: 371 RTFIDGLCVRPQV 383
            + + GLC   Q 
Sbjct: 366 NSIMLGLCKSRQT 378



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 6/322 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N+L+  + K    D  +     + S G  P++ T++I++   C  G+     
Sbjct: 113 SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE 172

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR   +P+VVTF  LI  LC +  +  A  +  K+   GC PN ++YN L++G 
Sbjct: 173 KLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGF 232

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A+     M +          P+ VTY+ ++  LCK+G VD A E+  Q+  +
Sbjct: 233 CKEKKMDRAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 286

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P ++TY ++I G         A  LL EM  +G++P++++ + +++ L + GK+D A
Sbjct: 287 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 346

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +    +    +RPNA TYN++M G C + + +R  +    M S  CK  + +Y ILI G
Sbjct: 347 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406

Query: 307 YCKNKEVEEALSLYNELPFKGI 328
                  +EAL L NEL  +G+
Sbjct: 407 IAYEGLAKEALDLLNELCSRGL 428



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 6/220 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           MH   P   S+N LL    K K  D  +     + S G +PD+ TY+ L+   CK G+V 
Sbjct: 215 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 274

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I  ++     +P ++T+ ++I GL    +   A  L  +++  G +P++ITY++L+
Sbjct: 275 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 334

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GL R G    A+  F ++       G+  +PN +TY+ I+ GLCK    D+A +    M
Sbjct: 335 SGLSREGKVDEAIKFFHDLE------GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
             +   P   TYT LI G  +     EA  LL E+  +G+
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 192/370 (51%), Gaps = 5/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF  L+    +    + V +L   +   G   D  T ++++   C+ G+       
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L +   PNVV +T+ I GLC    + +A  +  ++   G +PNV T+ TLI+GLC+
Sbjct: 239 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  LF ++   +      +KPN  TY+++I G C+EG + +A+ L ++M  + L
Sbjct: 299 IGWTERAFRLFLKLIKSSS-----YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 353

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+LI G C    ++ A  L+ +M  +G  PN+ + N +++  CK GK+  A +
Sbjct: 354 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 413

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +     ++ +  TY  L+   C  G I    +LF  M   GC  D  +Y  LI+ YC
Sbjct: 414 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYC 473

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + +++EE+   +++    G+ PT  TY ++  G  ++ ++  AL++F  M  N   AD+ 
Sbjct: 474 QQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI 533

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 534 TYGALISGLC 543



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 159/360 (44%), Gaps = 42/360 (11%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            +++  L +   +  V   F+R+   G  P++  Y+  I+  CK   V   F +   ++ 
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI 133
               PNV T T+LI GLC       A  LF KL K+   +PNV TY  +I G CR G   
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 339

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M           KPNT TY+ +I G CK G  D+A EL  +MK E   PN+ 
Sbjct: 340 RAEMLLVRMVEQG------LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 393

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I GFC      EA  +L     QG++ + ++  +++ E CK G +  A  L D M
Sbjct: 394 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 453

Query: 254 VQ-----------------CDVR------------------PNAFTYNTLMDGFCLTGKI 278
           V+                 C  R                  P   TY +++ G+C  G+ 
Sbjct: 454 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 513

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +F  M   GC  D  +Y  LI+G CK   +EEA +LY  +  K + P  VT  TL
Sbjct: 514 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 573



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 32/332 (9%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG- 145
           ++       R+ EAA +  ++++ G    V T N ++     TG  + A  +F  MT   
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 146 -----------------NGEIGVV-----------FKPNTVTYSIIIDGLCKEGFVDKAK 177
                             G++  V           F  +  T ++++  LC++G      
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E F +M      PNVV YT+ I G C      +A  +L EMV +G++PNV +   +++ L
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 238 CKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           CK G  + A RL L L+     +PN  TY  ++ G+C  GK+ R + L V M   G K +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y  LI G+CK    + A  L N++  +G  P + TYN +  G  +  + + A K+  
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +  D  TY   I   C   Q   TYA
Sbjct: 417 MATSQGLKFDKITYTILITEHC--KQGHITYA 446



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 9/271 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++  L+G   K   +D    L  ++   G  P++YTY+ +I+ FCK G++   + +
Sbjct: 355 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 414

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                      + +T+T LI   C +  I  A  LF ++   GC P++  Y +LI+  C+
Sbjct: 415 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 474

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 +   F +       IG++  P   TY+ +I G CK G    A  +F +M     
Sbjct: 475 QRQMEESQKFFDKCLM----IGLL--PTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY +LI G C  +   EAK L   M+D+ + P  V+   +  E C+  K   A  
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 588

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +LD +   D R    T + ++      G ++
Sbjct: 589 VLDRL---DKRQQVHTVDVVVRKLSALGDVD 616



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 6/242 (2%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++    + G + +A ++ L+M+   L   V T   ++        +  A+ +   M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P+  S   ++   C+ GK++    LL  M +     +  T   ++   C  G+   V 
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E F  M   G   +  +Y   I+G CK + V++A  +  E+  +G+KP V T+ TL  GL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 343 FEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGN 396
            +I   ERA +LF+++ + +    +  TY   I G C      R ++       +G   N
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 397 TN 398
           TN
Sbjct: 357 TN 358



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 12/200 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    + +  +     F +   IGL P   TY+ +I  +CK+G+ +L   +
Sbjct: 460 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 519

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F R++++ CFA + +T+ +LI GLC ESR+ EA AL+  +      P  +T  TL    C
Sbjct: 520 FERMVQNGCFA-DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYC 578

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R   T +A+++   +           +    T  +++  L   G VD A     ++  E+
Sbjct: 579 RREKTSIAVSVLDRLDK---------RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDED 629

Query: 188 LNPNVVTYTSLIHGFCHAND 207
              +  TYT  I+  C+ N+
Sbjct: 630 YAVDHATYTGFINS-CYENN 648


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 180/330 (54%), Gaps = 9/330 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SFN L+  L K+++ D    L K +    ++PD++TYS+LI+  CK G++ +   +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PN +TFT+LI G     R+  A   + ++   G +P+++ YNTL+NGLC+
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM        V  KP+ +TY+ +IDG CKEG ++ A E+   M  E +
Sbjct: 376 VGDVNKARKLVDEMKM------VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T+LI GFC      +A+  L EMV+ G++P+  +  ++++  CK G +    +
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M     +P   TYN LM+G C  G++     L  +M ++G   DD +YNIL+ G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           KN + E+ L L NE   KG+      Y +L
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVDYAYYTSL 576



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 176/350 (50%), Gaps = 6/350 (1%)

Query: 29  TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
           T+ + +  +   G  P +  Y+ILIN FCK G +    +IF  I +    P  V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
            GLC    + E   L   ++     P+V TY+ LI+GLC+ G   VA  LF EM      
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-- 323

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                +PN +T++ +IDG  +   +D A   + QM    + P++V Y +L++G C   D 
Sbjct: 324 ----LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           N+A+ L+ EM   G++P+ ++   +++  CK G +++A  +   M +  V  +   +  L
Sbjct: 380 NKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + GFC  G++   +     M   G K DD +Y ++I+GYCK   V+    L  E+   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KP V+TYN L +GL +  Q + A  L   M    V  D  TY   ++G C
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 186/347 (53%), Gaps = 6/347 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  +NIL+    K         +F  +   GL P   +++ LIN  CK   +  GF 
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +  +   P+V T++ LI GLC E R+  A  LF +++  G  PN IT+  LI+G  
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R+     A+N + +M      +GV  KP+ V Y+ +++GLCK G V+KA++L  +MK   
Sbjct: 340 RSRRMDSAMNTYHQMLT----MGV--KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ +TYT+LI G+C   D   A  +   M ++GV  + V+   +++  C++G++ +A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R L  MV+  ++P+  TY  ++DG+C  G +    +L   M+  G K    +YN+L+NG 
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           CK  +++ A  L   +   G+ P  +TYN L  G  +  +AE  LKL
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 6/319 (1%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           +  +  IL   F P V  +  LI   C E  I +A  +F +++  G  P  +++NTLING
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC++ +      L K M            P+  TYS++I GLCKEG +D A++LF +M+ 
Sbjct: 268 LCKSRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PN +T+T+LI G   +   + A     +M+  GV+P++V  N ++N LCK G ++ 
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +L+D M    ++P+  TY TL+DG+C  G +    E+   M   G   D+ ++  LI+
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C++  V +A     E+   G+KP   TY  +  G  +    +   KL  EMQ N    
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 366 DTCTYRTFIDGLCVRPQVR 384
              TY   ++GLC + Q++
Sbjct: 502 GVITYNVLMNGLCKQGQMK 520



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 13/371 (3%)

Query: 21  LAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           L   K  D+  S+F   L++ G     + +  L+  +   G VS     F  +  S F  
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQI 186

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
                  L+  +   +  V     ++++  +G  P V  YN LIN  C+ G    A  +F
Sbjct: 187 PFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIF 246

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            E+           +P TV+++ +I+GLCK   +D+   L   M+   + P+V TY+ LI
Sbjct: 247 NEIRKRG------LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           HG C     + A+ L  EM  +G++PN ++   +++   ++ +MD+A      M+   V+
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+   YNTL++G C  G +N+ ++L   M+ +G K D  +Y  LI+GYCK  ++E A+ +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 320 YNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              +  +G+    V +  L  G      +R AER L+  VE     +  D  TY   IDG
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA---GMKPDDATYTMVIDG 477

Query: 377 LCVRPQVRFTY 387
            C +  V+  +
Sbjct: 478 YCKKGNVKMGF 488



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 112/203 (55%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P V  Y  LI+ FC      +AK +  E+  +G++P  VS N ++N LCK+  +D   RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M +  + P+ FTY+ L+ G C  G+++  ++LF  M+  G + +  ++  LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           ++ ++ A++ Y+++   G+KP +V YNTL +GL ++    +A KL  EM+   +  D  T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 370 YRTFIDGLCVRPQVRFTYARRKG 392
           Y T IDG C    +      RKG
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKG 423


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 200/406 (49%), Gaps = 46/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FN  +  L K         L  R+   G  P+ +TY +L++  C+MG+V    ++
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLC 127
             ++      PNVV F +LI G  +  R+ EA A +   + + GC P++ TYNTLI GLC
Sbjct: 363 LNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + A  L  EM     E      PN +TY+I+ID  CKEG +++A+ +  +M  + 
Sbjct: 419 KKGYLVSARELMNEMQIKGCE------PNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 188 L-----------------------------------NPNVVTYTSLIHGFCHANDWNEAK 212
           L                                    P++ T+ SLI G C  N + EA 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           GL  +M+ +GV  N ++ N +++   + G M  A +L++ M+      +  TYN L+   
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G I +   LF  M S G   ++ S NILING C+   ++ AL    ++  +G+ P +
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VTYN+L +GL +  +A+ AL LF ++Q   +  D  TY T I   C
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 698



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 196/381 (51%), Gaps = 11/381 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR ++   P   S+N++L  L        V ++F  + S G+ P +YT+ +++   C + 
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + R    PN + + +LI  L    R+ E   L  ++   GC P+V T+N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
             I+GLC+      A  L   M          F PN+ TY +++ GLC+ G VD+A+ L 
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCK 239
            ++     NPNVV + +LI+G+      +EAK ++ E M+  G  P++ + N ++  LCK
Sbjct: 364 NKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G + +A  L++ M      PN  TY  L+D FC  G++   + +   M   G   +   
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI+  CK+++V++AL+++ ++  KG KP + T+N+L  GL ++ + E AL L+ +M 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 360 GNDVAADTCTYRTFIDGLCVR 380
              V A+T TY T I     R
Sbjct: 540 LEGVIANTITYNTLIHAFLRR 560



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 181/371 (48%), Gaps = 11/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F +++  L      D+  +L K +   G  P+   Y  LI+   K+G+V+    +
Sbjct: 233 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKL 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+V TF   I GLC   RI EAA L  ++   G  PN  TY  L++GLCR
Sbjct: 293 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYEN 187
            G    A  L  ++ N          PN V ++ +I+G    G +D+AK +  + M    
Sbjct: 353 MGKVDEARMLLNKVPN----------PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVG 402

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++ TY +LI G C       A+ L+ EM  +G +PNV++  ++++  CK G+++ A 
Sbjct: 403 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 462

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +LD M    +  NA  YN L+   C   K+     +F  M S GCK D F++N LI G 
Sbjct: 463 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  + EEAL LY ++  +G+    +TYNTL H        + ALKL  +M       D 
Sbjct: 523 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582

Query: 368 CTYRTFIDGLC 378
            TY   I  LC
Sbjct: 583 ITYNGLIKALC 593



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K  +  +   L   +   G  P++ TY+ILI+ FCK G++     +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     A N V +  LI  LC + ++ +A  +F  + + GC+P++ T+N+LI GLC+
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   NT+TY+ +I    + G + +A +L   M +   
Sbjct: 525 VNKFEEALGLYQDMLLE----GVI--ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 578

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C A +  +   L  +M+ +G+ PN +S N+++N LC+ G + +A  
Sbjct: 579 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 638

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYN+L++G C TG+      LF  ++  G   D  +YN LI+ +C
Sbjct: 639 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 698

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           K    ++A  L +     G  P  VT+  L
Sbjct: 699 KEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 140/283 (49%), Gaps = 11/283 (3%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           +F ++ + G  P V T+  ++  LC       A  L K+MT      G V  PN + Y  
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH----GCV--PNAIVYQT 275

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I  L K G V++  +L  +M      P+V T+   IHG C     +EA  L+  M+ +G
Sbjct: 276 LIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 335

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             PN  +  V+M+ LC+ GK+D A  LL+ +      PN   +NTL++G+   G+++  K
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAK 391

Query: 283 E-LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +  SM S+GC  D F+YN LI G CK   +  A  L NE+  KG +P V+TY  L   
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 451

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +  + E A  +  EM G  +A +   Y   I  LC   +V+
Sbjct: 452 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 494



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 11/267 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            Y  LI+ L   G       L  +M     + G+VF+ +   + +I+    + G   +A 
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMK----QEGIVFRESL--FILIMKHYGRAGLPGQAT 184

Query: 178 ELFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
            L L M+   +  P   +Y  ++      N       +  EM+ +G+ P V +  V+M  
Sbjct: 185 RLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKA 244

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LC   ++D+A  LL  M +    PNA  Y TL+      G++N V +L   M  MGC  D
Sbjct: 245 LCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPD 304

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             ++N  I+G CK   + EA  L + +  +G  P   TY  L HGL  + + + A  L  
Sbjct: 305 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 364

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           ++   +V      + T I+G   R ++
Sbjct: 365 KVPNPNVV----LFNTLINGYVSRGRL 387


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 200/406 (49%), Gaps = 46/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FN  +  L K         L  R+   G  P+ +TY +L++  C+MG+V    ++
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLC 127
             ++      PNVV F +LI G  +  R+ EA A +   + + GC P++ TYNTLI GLC
Sbjct: 345 LNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + A  L  EM     E      PN +TY+I+ID  CKEG +++A+ +  +M  + 
Sbjct: 401 KKGYLVSARELMNEMQIKGCE------PNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 188 L-----------------------------------NPNVVTYTSLIHGFCHANDWNEAK 212
           L                                    P++ T+ SLI G C  N + EA 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           GL  +M+ +GV  N ++ N +++   + G M  A +L++ M+      +  TYN L+   
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G I +   LF  M S G   ++ S NILING C+   ++ AL    ++  +G+ P +
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VTYN+L +GL +  +A+ AL LF ++Q   +  D  TY T I   C
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 680



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 196/381 (51%), Gaps = 11/381 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR ++   P   S+N++L  L        V ++F  + S G+ P +YT+ +++   C + 
Sbjct: 172 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + R    PN + + +LI  L    R+ E   L  ++   GC P+V T+N
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
             I+GLC+      A  L   M          F PN+ TY +++ GLC+ G VD+A+ L 
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCK 239
            ++     NPNVV + +LI+G+      +EAK ++ E M+  G  P++ + N ++  LCK
Sbjct: 346 NKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G + +A  L++ M      PN  TY  L+D FC  G++   + +   M   G   +   
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI+  CK+++V++AL+++ ++  KG KP + T+N+L  GL ++ + E AL L+ +M 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 360 GNDVAADTCTYRTFIDGLCVR 380
              V A+T TY T I     R
Sbjct: 522 LEGVIANTITYNTLIHAFLRR 542



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 181/371 (48%), Gaps = 11/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F +++  L      D+  +L K +   G  P+   Y  LI+   K+G+V+    +
Sbjct: 215 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKL 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+V TF   I GLC   RI EAA L  ++   G  PN  TY  L++GLCR
Sbjct: 275 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYEN 187
            G    A  L  ++ N          PN V ++ +I+G    G +D+AK +  + M    
Sbjct: 335 MGKVDEARMLLNKVPN----------PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVG 384

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++ TY +LI G C       A+ L+ EM  +G +PNV++  ++++  CK G+++ A 
Sbjct: 385 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 444

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +LD M    +  NA  YN L+   C   K+     +F  M S GCK D F++N LI G 
Sbjct: 445 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  + EEAL LY ++  +G+    +TYNTL H        + ALKL  +M       D 
Sbjct: 505 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564

Query: 368 CTYRTFIDGLC 378
            TY   I  LC
Sbjct: 565 ITYNGLIKALC 575



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K  +  +   L   +   G  P++ TY+ILI+ FCK G++     +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     A N V +  LI  LC + ++ +A  +F  + + GC+P++ T+N+LI GLC+
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   NT+TY+ +I    + G + +A +L   M +   
Sbjct: 507 VNKFEEALGLYQDMLLE----GVI--ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 560

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C A +  +   L  +M+ +G+ PN +S N+++N LC+ G + +A  
Sbjct: 561 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 620

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYN+L++G C TG+      LF  ++  G   D  +YN LI+ +C
Sbjct: 621 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 680

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           K    ++A  L +     G  P  VT+  L
Sbjct: 681 KEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 140/283 (49%), Gaps = 11/283 (3%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           +F ++ + G  P V T+  ++  LC       A  L K+MT      G V  PN + Y  
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH----GCV--PNAIVYQT 257

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I  L K G V++  +L  +M      P+V T+   IHG C     +EA  L+  M+ +G
Sbjct: 258 LIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG 317

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             PN  +  V+M+ LC+ GK+D A  LL+ +      PN   +NTL++G+   G+++  K
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAK 373

Query: 283 E-LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +  SM S+GC  D F+YN LI G CK   +  A  L NE+  KG +P V+TY  L   
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 433

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +  + E A  +  EM G  +A +   Y   I  LC   +V+
Sbjct: 434 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 476



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 11/267 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            Y  LI+ L   G       L  +M     + G+VF+ +   + +I+    + G   +A 
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMK----QEGIVFRESL--FILIMKHYGRAGLPGQAT 166

Query: 178 ELFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
            L L M+   +  P   +Y  ++      N       +  EM+ +G+ P V +  V+M  
Sbjct: 167 RLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKA 226

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LC   ++D+A  LL  M +    PNA  Y TL+      G++N V +L   M  MGC  D
Sbjct: 227 LCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPD 286

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             ++N  I+G CK   + EA  L + +  +G  P   TY  L HGL  + + + A  L  
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           ++   +V      + T I+G   R ++
Sbjct: 347 KVPNPNVV----LFNTLINGYVSRGRL 369


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L      +    LF+ +  +G+ PD+YTY+ILI+ FCK G +     +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P VVT+T+LI       ++ +A  +F ++   GC PN +TY  L++GLC+
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVF--------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G+   A  ++ ++  T+ + +    F         PN VTY  ++DGLCK   VD A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC A   + A+ + ++M   G  P+V +   +++ + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M++    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K  +++ +L L+ ++  KG  P  VTY  L + L      ++A  L  EM
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +          YR  I G 
Sbjct: 646 KQTYWPKYLQGYRCAIQGF 664



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    L K +   G  PD  TYS +I   C   +V   F++F  +      P
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A  LF ++++ GC P V+TY  LI+   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M +         +PN VTY  ++DGLCK G + KA E++ ++                
Sbjct: 382 HRMVDAGC------RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L PNVVTY +L+ G C A+  + A  LL  M+  G +PN +  + +++  CK GK+
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A  +   M +C   P+  TY +L+D     G+++   ++   M    C  +  +Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G C+  E E+AL L + +  KG  P VVTY  L  GL +  + + +L LF +M     
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 364 AADTCTYRTFIDGLCV 379
           + +  TYR  I+ LC 
Sbjct: 616 SPNYVTYRVLINHLCA 631



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 188/426 (44%), Gaps = 80/426 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       +F R+   G  P+  TY  L++  CK G +S  F +
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 69  FGRIL----------------RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++                R   APNVVT+ +L+ GLC   ++  A  L   + + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ LI+G C+ G    A  +F +MT                    +G + +  K
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ +IDGLC+ G  +KA +L   M+ +  +PNVVTYT+LI G  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------- 255
            A   + +  L  +M  +G  PN V+  V++N LC  G +D A  LL  M Q        
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 256 ---CDVR----------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              C ++                      P A  Y  L+D F   G++    EL   M  
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 291 M--GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +    K D+  Y  LI   C   +VEEA  LY+E+  +G  P +  +  L  GL E+++ 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 349 ERALKL 354
           + AL+L
Sbjct: 776 DEALQL 781



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 188/448 (41%), Gaps = 86/448 (19%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           ++  L +  ++D  +S   R+      P++ TY  L++ F K  Q+     I   ++   
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI--- 133
             PN   F SL+   C E     A  L  ++   GC P  + YN  I  +C         
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 134 ---VALNLFKEMTNGNGEIGVV-----------------------------FKPNTVTYS 161
              +A  ++ EM   N  +  V                             F P+T TYS
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 162 -----------------------------------IIIDGLCKEGFVDKAKELFLQMKYE 186
                                              I+ID  CK G +++A+ LF +M+  
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P VVTYT+LIH +  A    +A  +   MVD G +PN V+   +++ LCK G +  A
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 247 ----SRLL--------DLMVQCDVR----PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
               ++L+        D    C+ R    PN  TY  L+DG C   K++   EL  +M S
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC+ +   Y+ LI+G+CK  +++ A  ++ ++   G  P+V TY +L   +F+  + + 
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A+K+  +M  +    +  TY   IDGLC
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLC 560



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 143/353 (40%), Gaps = 15/353 (4%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L   G  P   TY+ L+      GQV LGF +   +  S F  +  T       LC E R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
             +A  +  + + F  +  + T+  +I+GL    +   A++    M   N  I     PN
Sbjct: 91  WADALDMIER-EDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRM-RCNSCI-----PN 141

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY  ++ G  K+  +   K +   M  E  NPN   + SL+H +C+  D+  A  LL 
Sbjct: 142 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLN 201

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKM------DNASRLLDLMVQCDVRPNAFTYNTLMD 270
            M   G  P  V  N+ +  +C   K+      D A ++   M+  +   N         
Sbjct: 202 RMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFAR 261

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  GK ++  +L   M   G   D  +Y+ +I   C   +VE+A  L+ E+   G+ P
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            V TY  L     +    E+A  LF EM+    +    TY   I       QV
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 203/433 (46%), Gaps = 72/433 (16%)

Query: 36  RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
           R  +  + PD+ T+ ILI+C C  G ++LGF   G+I+++    + V FT L++ LCA+ 
Sbjct: 3   RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62

Query: 96  RIVEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG--------- 145
           R  +A   +  ++   GC P+V +Y+TL+ GLC       A  L   M            
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122

Query: 146 -----------NGEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                       G++G  +            PN VT + +IDGLCK   +DKA+ +  QM
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             E++ PN  TY SLIHG+  +  W EA  +L EM   G +PNVV+ N++++ LCK+G  
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG---KINRVKEL---------------- 284
             A  + + M+Q   +P+A TY +L+ G+   G   ++N VK+L                
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 285 ----------------FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
                           F+ M+ +G   D  +Y  +I+G CK   +++A+S + ++   G+
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID-----GLCVRPQV 383
            P ++T+ TL HG     + E+A +LF EM    +  D   +   ID     G     Q 
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 384 RFTYARRKGNSGN 396
            F    R G   N
Sbjct: 423 LFDLMPRAGAKPN 435



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 198/415 (47%), Gaps = 46/415 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGF 66
           P V S++ LL  L   K  +    L   +   G    PD+ +YS +I+ F K G V   +
Sbjct: 82  PDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAY 141

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F ++L     PNVVT  S+I GLC    + +A A+  ++      PN  TYN+LI+G 
Sbjct: 142 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 201

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             +G    A+ + KEM+  +G+     +PN VTY+++ID LCK GF  +A+E+F  M   
Sbjct: 202 LSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQS 255

Query: 187 NLNPNVVTYTSLIHG-----------------------------------FCHANDWNEA 211
              P+  TY SL+HG                                   +C     +EA
Sbjct: 256 GPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEA 315

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
               I+M   G  P++V+   +++ LCK G++D+A      M+   + PN  T+ TL+ G
Sbjct: 316 SLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHG 375

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           F + GK  + +ELF  M   G   D   +  +I+   K  +V EA  L++ +P  G KP 
Sbjct: 376 FSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPN 435

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC---VRPQV 383
           VV+YNT+ HG F   +    +KL  +M    +     T+ T +DG+    ++P V
Sbjct: 436 VVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDV 490



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 182/361 (50%), Gaps = 22/361 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N L+     +  +   + + K ++  G  P++ TY++LI+C CK G  +    I
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++S   P+  T+ SL+ G   E  +VE   +   +   G   N  T++  I   C+
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F +M     ++G  F P+ VTY+ +IDGLCK G +D A   F QM  + L
Sbjct: 309 CGRLDEASLTFIKMQ----QLG--FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN++T+T+LIHGF     W +A+ L  EM+D+G+ P+V     +++ L K GK+  A +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L DLM +   +PN  +YNT++ G+ + G++  V +L   M  +G K    ++N L++G  
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                             G+KP V T  TL     E  + E  L LF EM G     DT 
Sbjct: 483 S----------------MGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 526

Query: 369 T 369
           T
Sbjct: 527 T 527


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L      +    LF+ +  +G+ PD+YTY+ILI+ FCK G +     +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P VVT+T+LI       ++ +A  +F ++   GC PN +TY  L++GLC+
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVF--------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G+   A  ++ ++  T+ + +    F         PN VTY  ++DGLCK   VD A E
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC A   + A+ + ++M   G  P+V +   +++ + 
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M++    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K  +++ +L L+ ++  KG  P  VTY  L + L      ++A  L  EM
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +          YR  I G 
Sbjct: 581 KQTYWPKYLQGYRCAIQGF 599



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    L K +   G  PD  TYS +I   C   +V   F++F  +      P
Sbjct: 197 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 256

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A  LF ++++ GC P V+TY  LI+   +      A ++F
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M +         +PN VTY  ++DGLCK G + KA E++ ++                
Sbjct: 317 HRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L PNVVTY +L+ G C A+  + A  LL  M+  G +PN +  + +++  CK GK+
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A  +   M +C   P+  TY +L+D     G+++   ++   M    C  +  +Y  +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G C+  E E+AL L + +  KG  P VVTY  L  GL +  + + +L LF +M     
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 364 AADTCTYRTFIDGLCV 379
           + +  TYR  I+ LC 
Sbjct: 551 SPNYVTYRVLINHLCA 566



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 188/426 (44%), Gaps = 80/426 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       +F R+   G  P+  TY  L++  CK G +S  F +
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350

Query: 69  FGRIL----------------RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++                R   APNVVT+ +L+ GLC   ++  A  L   + + GC
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNGEIGVVFK 154
           EPN I Y+ LI+G C+ G    A  +F +MT                    +G + +  K
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ +IDGLC+ G  +KA +L   M+ +  +PNVVTYT+LI G  
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------- 255
            A   + +  L  +M  +G  PN V+  V++N LC  G +D A  LL  M Q        
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 256 ---CDVR----------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              C ++                      P A  Y  L+D F   G++    EL   M  
Sbjct: 591 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650

Query: 291 M--GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +    K D+  Y  LI   C   +VEEA  LY+E+  +G  P +  +  L  GL E+++ 
Sbjct: 651 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710

Query: 349 ERALKL 354
           + AL+L
Sbjct: 711 DEALQL 716



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 186/444 (41%), Gaps = 86/444 (19%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L +  ++D  +S   R+      P++ TY  L++ F K  Q+     I   ++     PN
Sbjct: 52  LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI------V 134
              F SL+   C E     A  L  ++   GC P  + YN  I  +C            +
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 171

Query: 135 ALNLFKEMTNGNGEIGVV-----------------------------FKPNTVTYS---- 161
           A  ++ EM   N  +  V                             F P+T TYS    
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231

Query: 162 -------------------------------IIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                                          I+ID  CK G +++A+ LF +M+    +P
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
            VVTYT+LIH +  A    +A  +   MVD G +PN V+   +++ LCK G +  A    
Sbjct: 292 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 351

Query: 247 SRLL--------DLMVQCDVR----PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           ++L+        D    C+ R    PN  TY  L+DG C   K++   EL  +M S GC+
Sbjct: 352 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 411

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   Y+ LI+G+CK  +++ A  ++ ++   G  P+V TY +L   +F+  + + A+K+
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
             +M  +    +  TY   IDGLC
Sbjct: 472 LSQMLKDSCTPNVVTYTAMIDGLC 495



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 170/400 (42%), Gaps = 58/400 (14%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           ++  G   D +T     +  CK G+ +    +   I R  F  + V  T +I GL   S 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASY 57

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRT---GHTIVALNLFKEMTNG-------- 145
             EA +   +++   C PNV+TY TL++G  +    G     +N+   MT G        
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM--MTEGCNPNPSLF 115

Query: 146 ---------NGEIGVVFK-----------PNTVTYSIIIDGLCKE------GFVDKAKEL 179
                      +    +K           P  V Y+I I  +C +        +D A+++
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           + +M   N   N V   +     C    +++A  L+ EM+ +G  P+  + + ++  LC 
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
             K++ A  L   M    V P+ +TY  L+D FC  G I + + LF  M S+GC     +
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y  LI+ Y K K+V +A  +++ +   G +P  VTY  L  GL +     +A +++ ++ 
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355

Query: 360 GNDVAADT----------------CTYRTFIDGLCVRPQV 383
           G   +AD+                 TY   +DGLC   +V
Sbjct: 356 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKV 395



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 6/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K    D  L LF +++  G  P+  TY +LIN  C  G +    ++
Sbjct: 517 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + ++ +   +  +   I+G       + +  +  +++++G  P    Y  LI+   +
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 634

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A+ L KEM     E+    K +   Y+ +I  LC    V++A  L+ +M     
Sbjct: 635 AGRLEIAMELHKEMM----EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGF 690

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            P +  +  LI G      W+EA  L   +  +GV
Sbjct: 691 VPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++   +   + +    +   +   G+ PD YTY  LI+  CK G++     +
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PN VT+ +LI G C +  +  A +   ++   G  P+V TYN L++ L  
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A ++ KEM       G++  P+ +TY+I+I+G  + G   +A +L  +M  + +
Sbjct: 326 EGRMGEADDMIKEMRKK----GII--PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  VTYTSLI+     N   EA  L  +++DQGV P+V+  N +++  C NG ++ A  
Sbjct: 380 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFM 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +  V P+  T+NTLM G C  GK+   + L   M+  G K D  SYN LI+GY 
Sbjct: 440 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYG 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++++A  + +E+   G  PT++TYN L   L + ++ + A +L  EM    ++ D  
Sbjct: 500 RRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 559

Query: 369 TYRTFIDGL 377
           TY + I+G+
Sbjct: 560 TYLSLIEGM 568



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 157/317 (49%), Gaps = 12/317 (3%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F PNVV++ ++I G  +   I  A  +   ++  G EP+  TY +LI+G+C+ G    A 
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            LF +M     EIG+V  PN VTY+ +IDG C +G +++A     +M  + + P+V TY 
Sbjct: 264 GLFDKMV----EIGLV--PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 317

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL---M 253
            L+H         EA  ++ EM  +G+ P+ ++ N+++N   + G   NA R  DL   M
Sbjct: 318 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG---NAKRAFDLHNEM 374

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +   + P   TY +L+       ++    +LF  +   G   D   +N +I+G+C N  V
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E A  L  E+  K + P  VT+NTL  G     + E A  L  EM+   +  D  +Y T 
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494

Query: 374 IDGLCVRPQVRFTYARR 390
           I G   R  ++  +  R
Sbjct: 495 ISGYGRRGDIKDAFXVR 511



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 123/238 (51%)

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+ FKPN V+Y+ II G    G ++ A+ +   M+ + + P+  TY SLI G C      
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA GL  +MV+ G+ PN V+ N +++  C  G ++ A    D MV+  + P+  TYN L+
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
               + G++    ++   M   G   D  +YNILINGY +    + A  L+NE+  KGI+
Sbjct: 321 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIE 380

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           PT VTY +L + L    + + A  LF ++    V+ D   +   IDG C    V   +
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%)

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           L GK+ + +E    ME +G K +  SYN +I+GY     +E A  + + +  KGI+P   
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           TY +L  G+ +  + E A  LF +M    +  +  TY T IDG C +  +   ++ R
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +FN L+    +    +    L   +   G+ PD  +Y+ LI+ + + G +   F 
Sbjct: 450 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFX 509

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +   +L   F P ++T+ +LIK LC       A  L  ++   G  P+  TY +LI G+
Sbjct: 510 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 42/94 (44%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N L+    +         +   + SIG  P L TY+ LI C CK  +  L   +
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
              ++    +P+  T+ SLI+G+     +VE  A
Sbjct: 546 LKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDNA 579


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 197/371 (53%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+L+G L K K       LF  ++   L P+  T++ LI+ +CK G+V +   +
Sbjct: 99  PNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGL 158

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ +    P+++TF SL+ GLC   RI EA  +  ++K  G  P+  TY+ + +GL +
Sbjct: 159 RERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLK 218

Query: 129 TGHTI-VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      AL+L++E       IG   K +  T SI+++GLCKEG V+KA+E+   +    
Sbjct: 219 SDDGAGAALDLYREA------IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHG 272

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P  V Y ++++G+C   D + A   + +M  +G++PN ++ N ++++ C+   +D A 
Sbjct: 273 LVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             +  MV   + P+  TYN L+DG+      +R  ++   ME  G K +  SY  LIN  
Sbjct: 333 EWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCL 392

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+ ++ EA  +  ++  +G+ P    YN L  G   + +   AL+ F EM  N + A  
Sbjct: 393 CKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI 452

Query: 368 CTYRTFIDGLC 378
            TY + I GLC
Sbjct: 453 VTYNSLIKGLC 463



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 168/362 (46%), Gaps = 7/362 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K    +    + K L   GL P    Y+ ++N +C++G +    +   ++  
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN + F S+I   C    I +A     K+   G  P+V TYN LI+G  R      
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              + +EM   NGE     KPN ++Y  +I+ LCK+G + +A+ +   M    + PN   
Sbjct: 366 CFQILEEMEE-NGE-----KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI G C      EA     EM   G+   +V+ N ++  LCK GK+  A  +  L+ 
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                P+  TYN+L+ G+   G   +  EL+ +M+ +G K    +++ LI+G C  + ++
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIK 538

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
              +L+NE+    + P  V YN + H   E    ++A  L  EM    V  D  TY + I
Sbjct: 539 LKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLI 598

Query: 375 DG 376
            G
Sbjct: 599 LG 600



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 11/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN ++    + +  D      K++   G+ P + TY+ILI+ + ++   S  F I
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNV+++ SLI  LC + +I+EA  +   +   G  PN   YN LI+G C 
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429

Query: 129 TGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    AL  F EM+ NG G          VTY+ +I GLCK G + +A+E+F  +    
Sbjct: 430 VGKLREALRFFDEMSKNGIG-------ATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+V+TY SLI G+ +A +  +   L   M   G++P + + + +++   K G +    
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKE 541

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L + M+Q ++ P+   YN ++  +  TG + +   L   M  MG + D+ +YN LI G+
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  ++ E   L +++  KG+ P   TY+ L  G  +++    A   + EM  N    + 
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 368 CTYRTFIDGLCVRPQVRFTYAR 389
           C       GL  R   R   A+
Sbjct: 662 CICNELSTGL--RKDGRLQEAQ 681



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 43/300 (14%)

Query: 87  LIKGLCAESRI-VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           ++  +C+ES++  + + L+  ++  G  P+      ++  L  +      L+LFKEM   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEM--- 57

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
              +G+ F+P+ + Y   +    K G +  A ELF  MK   + PNV  Y          
Sbjct: 58  ---VGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVY---------- 104

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
                                    NV++  LCK  ++ +A +L   M   ++ PN  T+
Sbjct: 105 -------------------------NVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           NTL+DG+C  G+++    L   M+    +    ++N L++G CK + +EEA  + NE+  
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199

Query: 326 KGIKPTVVTYNTLFHGLFEIRQ-AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            G  P   TY+ +F GL +    A  AL L+ E  G  V  D  T    ++GLC   +V 
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 7/216 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+   +   +    L L++ +  +GL P + T+  LI+   K G + L   +
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETL 543

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+   +P+ V + ++I        + +A +L  ++   G  P+  TYN+LI G  +
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L+  K++ +     G++  P   TYS++I G C     + A   + +M     
Sbjct: 604 EGK----LSETKDLVDDMKAKGLI--PEADTYSLLIQGHCDLKDFNGAYVWYREMLENGF 657

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            PNV     L  G        EA+ +  EM+  G+ 
Sbjct: 658 LPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 195/367 (53%), Gaps = 8/367 (2%)

Query: 24  NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
           N   ++  S+F  +   G   +  +Y+ LI+  C++G+V  G  IF ++      P V T
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +T ++  L    R +EA  LF++++  GCEPN+ TY  +IN +C+         +  EM 
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
               E G+V  P+  TY+ +IDG CKEG V+ A+E+   M   + NPN  TY  LI GFC
Sbjct: 137 ----EKGLV--PSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC 190

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              + + A  LL +M++  + P+VV+ N +++  CK G +D+A RLL+LM +  V P+ +
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TY+  +D  C  G+I     LF S++  G K ++  Y  LI+GYCK  ++++A SL + +
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +   P   TYN L  GL + R+ + AL L   M    +     TY   I  + +  + 
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI--VAMLKEG 368

Query: 384 RFTYARR 390
            F YA R
Sbjct: 369 DFDYAHR 375



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 179/374 (47%), Gaps = 18/374 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  L ++      ++LF  +   G  P+++TY+++IN  CK  ++  G  I
Sbjct: 72  PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V T+ +LI G C E  +  A  +   + +  C PN  TYN LI G CR
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCR 191

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A+ L  +M            P+ VTY+ +I G CK G++D A  L   M    +
Sbjct: 192 KKNVHRAMALLSKMLESR------LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV 245

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+  I   C      EA  L   + ++G++ N V    +++  CK GKMD+A+ 
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNILIN 305
           LLD M+  D  PN+ TYN L+DG C   K  +V+E  + MESM   G K    +Y ILI 
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLC---KERKVQEALLLMESMIQKGLKCTVPTYTILIV 362

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF---EIRQAERALKLFVEMQGND 362
              K  + + A  + +++   G +P V  Y    H       I++AE  + +  E     
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE---RG 419

Query: 363 VAADTCTYRTFIDG 376
           V  D  TY   ID 
Sbjct: 420 VMPDALTYTLVIDA 433



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 156/284 (54%), Gaps = 10/284 (3%)

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKAK 177
           ++NG C+ G+ + A NL  ++ +      ++ K     N V+Y+ +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGNLVEA-NLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            +F +M+ ++  P V TYT ++H    +    EA  L  EM ++G +PN+ +  V++N +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  K++   R+LD MV+  + P+  TYN L+DG+C  G +   +E+   M S  C  ++
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YN LI G+C+ K V  A++L +++    + P+VVTYN+L HG  +I   + A +L   
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
           M  N V  D  TY  FID LC + ++      F   + KG   N
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN 283



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 183/429 (42%), Gaps = 60/429 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +++  + K    +    +   +   GL P + TY+ LI+ +CK G V     I
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEI 166

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN  T+  LI G C +  +  A AL +K+      P+V+TYN+LI+G C+
Sbjct: 167 LDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCK 226

Query: 129 TGHTIVALNLFKEMTNGNG----------------------EIGVVF--------KPNTV 158
            G+   A  L   M N NG                      E  V+F        K N V
Sbjct: 227 IGYLDSAYRLLNLM-NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+ +IDG CK G +D A  L  +M  E+  PN  TY +LI G C      EA  L+  M
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G++  V +  +++  + K G  D A R+LD MV    +P+ + Y   +  FC  G I
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNI 405

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +++   M   G   D  +Y ++I+ Y     +  A  +   +   G  P+  TY+ L
Sbjct: 406 KEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465

Query: 339 FHGL-----------------------------FEIRQAERALKLFVEMQGNDVAADTCT 369
              L                             +++ + E AL+LF +M  +  + +  T
Sbjct: 466 IKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINT 525

Query: 370 YRTFIDGLC 378
           Y   I GLC
Sbjct: 526 YAKLIIGLC 534



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 177/407 (43%), Gaps = 35/407 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           + H +   P   ++N L+    + K+    ++L  ++    L P + TY+ LI+  CK+G
Sbjct: 169 LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIG 228

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +   + +   +  +   P+  T++  I  LC + RI EA  LF  LK  G + N + Y 
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G C+ G    A +L   M   +        PN+ TY+ +IDGLCKE  V +A  L 
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTED------CLPNSSTYNALIDGLCKERKVQEALLLM 342

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + L   V TYT LI       D++ A  +L +MV  G QP+V      ++  C  
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A  ++ +M +  V P+A TY  ++D +   G +N   ++   M   GC     +Y
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462

Query: 301 NILINGYCKNK-----------------------------EVEEALSLYNELPFKGIKPT 331
           + LI    K +                             + E AL L+ ++   G  P 
Sbjct: 463 SCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPN 522

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + TY  L  GL ++ +   A KLF  M    V+     Y + ++  C
Sbjct: 523 INTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 175/433 (40%), Gaps = 70/433 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K  + D+   L   +N  G+ PD +TYS+ I+  CK G++    V+
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N V +T+LI G C   ++ +A +L  ++    C PN  TYN LI+GLC+
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L + M           K    TY+I+I  + KEG  D A  +  QM     
Sbjct: 332 ERKVQEALLLMESMIQKG------LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 189 NPNVVTYTSLIHGFC------HANDW-----------------------------NEAKG 213
            P+V  YT+ IH FC       A D                              N A  
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 214 LLIEMVDQGVQP----------------------NVVSSNVIMN-------ELCKNGKMD 244
           +L  M D G  P                      NV   + I N       ++ K  K +
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + M++    PN  TY  L+ G C  G++   ++LF  M   G    +  YN L+
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           N  C+     +A+ L   +   G  P + + N LF GL+E    E+A  +F  +      
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625

Query: 365 ADTCTYRTFIDGL 377
            D   ++  IDGL
Sbjct: 626 DDEVAWKILIDGL 638



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 149/363 (41%), Gaps = 35/363 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+  L K +     L L + +   GL   + TY+ILI    K G       I
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S + P+V  +T+ I   C    I EA  + + +   G  P+ +TY  +I+    
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK----------- 177
            G    A ++ K M +   +      P+  TYS +I  L KE    K K           
Sbjct: 437 LGLLNPAFDVLKRMFDTGCD------PSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNV 490

Query: 178 ------------------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
                             ELF +M     +PN+ TY  LI G C       A+ L   M 
Sbjct: 491 FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++GV P+    N ++N  C+ G   +A RL+  M++    P   + N L  G    G   
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K +F ++   G   D+ ++ ILI+G  KN   +    L   +  +G +    TY  L 
Sbjct: 611 KAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670

Query: 340 HGL 342
            GL
Sbjct: 671 EGL 673



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 6/163 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P ++++  L+  L K         LF  +N  G+ P    Y+ L+NC C++G    
Sbjct: 517 HGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGD 576

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              + G ++     P + +   L  GL  E    +A  +F+ L   G   + + +  LI+
Sbjct: 577 AVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILID 636

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           GL + G +     L   M     +I      +  TY ++I+GL
Sbjct: 637 GLLKNGLSDGCSELLGVMEARGCQI------HPQTYRMLIEGL 673


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 189/362 (52%), Gaps = 17/362 (4%)

Query: 25  KHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
           + +D  L LFK + + GLF P+ +TY++LI  FCK GQ+     +F  +  S   PN  T
Sbjct: 4   RKHDQALRLFKEVLA-GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
             +L+ GLC   ++  A  LF +++A    P   ++N L+ G    G    A+  FKEM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
               E      P+  +Y I++  L   G + +A  LF  M     +P+++TY  L+ G+C
Sbjct: 120 ASGVE------PDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYC 170

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
                 EA+ L+ E++  G +PNV + ++I+N  CK  K++ A  +   M++ +  PNA 
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 230

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK-EVEEALSLYNE 322
           T+NTL+ GFC  G +    +LF  ME +GCK    +YN LI+  CK +  V  A+ L+N+
Sbjct: 231 TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNK 290

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           L   G+ PT+VTYN+L  G  E  +A   L+L   M       D  TY   I GLC   +
Sbjct: 291 LEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 348

Query: 383 VR 384
           V 
Sbjct: 349 VE 350



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 191/403 (47%), Gaps = 51/403 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P   ++N+L+    K       +S+F  + S GL P+  T + L+   C++GQ+S     
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 64  --------------------LGFVIFGRILR-------SCFAPNVVTFTSLIKGLCAESR 96
                                GF + GR +        S   P++ ++  L+  L    R
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA ALF+   A  C P+++TYN L++G C+ G T  A +L KE+          ++PN
Sbjct: 143 MAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG------YEPN 193

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TYSIII+  CK   V++A E+F++M   N  PN VT+ +LI GFC A    +A  L  
Sbjct: 194 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 253

Query: 217 EMVDQGVQPNVVSSNVIMNELCKN-GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           EM   G +  +V+ N +++ LCK  G +  A  L + +    + P   TYN+L+ GF  +
Sbjct: 254 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--S 311

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            + N    L   M + GCK D  +YN LI+G C    VE+A  L+N +      P V T+
Sbjct: 312 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTF 368

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N L  GL   ++ E A  +   M     A D  T+ T I   C
Sbjct: 369 NFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFC 407



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 19/335 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ILL  L+ +       +LF   +++   PD+ TY++L++ +CK+GQ      +
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              IL++ + PNV T++ +I   C   ++ EA  +F K+    C PN +T+NTLI G C+
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQMKYEN 187
            G    A+ LF EM     +IG   K   VTY+ +ID LCK+ G V  A +LF +++   
Sbjct: 242 AGMLEDAIKLFAEME----KIGC--KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P +VTY SLI GF  +   N+   LL  M  +G +P+V++ N +++ LC   ++++A 
Sbjct: 296 LTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 353

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL + M      PN  T+N L+ G C   K+   + +   M +     D  ++N +I  +
Sbjct: 354 RLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAF 406

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           CK   + +A  +  ++   G  P   T   L HG+
Sbjct: 407 CKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 158/307 (51%), Gaps = 22/307 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+L+    K        SL K +   G  P+++TYSI+INC+CK+ +V   + +
Sbjct: 157 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 216

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF +LI G C    + +A  LF +++  GC+  ++TYNTLI+ LC+
Sbjct: 217 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 276

Query: 129 T-GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE---LFLQMK 184
             G    A++LF ++       G    P  VTY+ +I     +GF ++A +   L   M 
Sbjct: 277 KRGGVYTAVDLFNKLE------GAGLTPTIVTYNSLI-----QGFSERANDGLRLLCHMH 325

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            E   P+V+TY  LI G C AN   +A+ L   M      PNV + N ++  LC   K++
Sbjct: 326 AEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVE 382

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M      P+  T+NT++  FC  G ++  +E+   M   G   + ++   L 
Sbjct: 383 EARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438

Query: 305 NGYCKNK 311
           +G   +K
Sbjct: 439 HGIQSSK 445



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A   ++A  L  E++     PN  + NV++   CK G+M  A  +   M    + PNA T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            NTL+ G C  G+++   +LF  M++        S+NIL+ G+        A+  + E+ 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEMK 119

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             G++P + +Y+ L   L +  +   A  LF  M     + D  TY   +DG C
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYC 170


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 181/335 (54%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+Y+Y+ +I+ F K  Q+     +F R+    F+P+VVT+  +I  LC+  ++  A  +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L   GC+P+VITY  LI      G    AL LF E+ +         +P+  TY+ I
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG------LRPDLYTYNAI 242

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG  D+A +    +     NP+VV+Y  L+  F + + W + + L+ +MV  G 
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGC 302

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PNVV+ +++++  C+ G++  A  +L++M +  + P++++Y+ L+  FC  G+++   E
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               M S GC  D  +YN ++   CK    + AL ++ +L   G  PTV  YNT+F  L+
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALW 422

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 +AL++  EM    +  D  TY + I  LC
Sbjct: 423 SCGNKIKALEMISEMIRKGIDPDEITYNSLISCLC 457



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 188/398 (47%), Gaps = 29/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++   +K    D+   +F R+ S G  PD+ TY+I+I   C  G++ L F +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+    P+V+T+T LI+    E RI EA  LF +L + G  P++ TYN +I G+C+
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    AL+  + ++       VV                              +PN VT
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +SI+I   C+EG V +A  +   MK + L P+  +Y  LI  FC     + A   L +MV
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P++V+ N I+  LCK G  D A  + + + +    P    YNT+       G   
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +  E+   M   G   D+ +YN LI+  C++  V+EA+ L  ++     +PTV+++N + 
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G+ +  +    ++L + M       +  +Y   I+G+
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 162/355 (45%), Gaps = 41/355 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+         +  L LF  L S GL PDLYTY+ +I   CK G        
Sbjct: 199 PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDF 258

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VV++  L++    +SR  +   L   +   GCEPNV+T++ LI+  CR
Sbjct: 259 VRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCR 318

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+N+ + M     E G+   P++ +Y  +I   CKEG +D A E   +M  +  
Sbjct: 319 EGRVREAVNVLEVMK----EKGLT--PDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 189 NPNVVTYTSLIHGFCH------AND------------------------WN-----EAKG 213
            P++V Y +++   C       A D                        W+     +A  
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           ++ EM+ +G+ P+ ++ N +++ LC++G +D A  LL  M     +P   ++N ++ G C
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
              ++    EL ++M   GC  ++ SY +LI G        EA+ L N L   G+
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NILL        ++    L K +   G  P++ T+SILI+ FC+ G+V     +
Sbjct: 269 PDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNV 328

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++  LI   C E R+  A     K+ + GC P+++ YNT++  LC+
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +AL++F+++     E+G    P    Y+ +   L   G   KA E+  +M  + +
Sbjct: 389 FGCADLALDVFEKL----DEVGC--PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ +TY SLI   C     +EA GLL++M     QP V+S N+++  +CK  ++     
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIE 502

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           LL  MV+    PN  +Y  L++G    G      EL  S+  +G    D S
Sbjct: 503 LLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           L+N  CR G    +L   + + +        FKP+ V  + +I G      + KA  + +
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKG------FKPDVVLCTKLIKGFFNSRNLKKAMRV-M 120

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           ++     +P+V +Y ++I GF  AN  + A  +   M  +G  P+VV+ N+++  LC  G
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           K++ A  ++D +++   +P+  TY  L++   L G+IN   ELF  + S G + D ++YN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +I G CK    + AL     L  +G  P VV+YN L        + E   +L  +M  +
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300

Query: 362 DVAADTCTYRTFIDGLCVRPQVR 384
               +  T+   I   C   +VR
Sbjct: 301 GCEPNVVTHSILISSFCREGRVR 323



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 1/199 (0%)

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F Q  + NL+        L++  C A   NE+   L  +V +G +P+VV    ++     
Sbjct: 50  FRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFN 109

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +  +  A R+++++ +    P+ ++YN ++ GF    +I+   ++F  M S G   D  +
Sbjct: 110 SRNLKKAMRVMEIL-ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVT 168

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YNI+I   C   ++E A  + +EL   G KP+V+TY  L        +   AL+LF E+ 
Sbjct: 169 YNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELV 228

Query: 360 GNDVAADTCTYRTFIDGLC 378
              +  D  TY   I G+C
Sbjct: 229 SRGLRPDLYTYNAIIRGIC 247



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 4/145 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N +   L    +    L +   +   G+ PD  TY+ LI+C C+ G V     
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +  + F P V++F  ++ G+C   R+ E   L   +   GC PN  +Y  LI G+ 
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV 152
             G    A+    E+ N    +GV+
Sbjct: 528 YAGWRAEAM----ELANSLYRLGVI 548



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 1/120 (0%)

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L++  C  GK N       S+ S G K D      LI G+  ++ +++A+ +   L   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             P V +YN +  G  +  Q + A ++F  M+    + D  TY   I  LC R ++   +
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R     PP   S+N+++  L ++      L +F  +  +G+ P+  TY+ +I+   K G 
Sbjct: 7   RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGD 66

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +  GF +  ++L     PN+VT+  L+ GLC   R+ E   L  ++ +    P+  TY+ 
Sbjct: 67  LEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSI 126

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           L +GL RTG +   L+LF E       +G        T SI+++GLCK+G V KA+++  
Sbjct: 127 LFDGLTRTGESRTMLSLFAESLKKGVMLG------AYTCSILLNGLCKDGKVAKAEQVLE 180

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            + +  L P  V Y +LI+G+C   D   A  +  +M  + ++P+ ++ N ++N LCK  
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +  A  L+  M +  V P+  T+NTL+D +   G++ +   +   M+  G K D  S+ 
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            ++  +CKN ++ EA+++ +++ +K + P    YN++     E    E+A  L  +M+ +
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
            V+A   TY   + GLC   Q+
Sbjct: 361 GVSASIVTYNLLLKGLCRSSQI 382



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 7/381 (1%)

Query: 4   MHPSPPP-VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P + ++N+LL  L +    D    L   + S  +FPD +TYSIL +   + G+ 
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F   L+        T + L+ GLC + ++ +A  +   L   G  P  + YNTL
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING C+      A  +F++M + +       +P+ +TY+ +I+GLCK   V KA++L ++
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   ++P+V T+ +LI  +  A    +   +L +M  +G++ +V+S   ++   CKNGK
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +LD M+  DV PNA  YN+++D +  +G   +   L   M++ G      +YN+
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G C++ +++EA  L   L  +G++P VV+YNT+          ++AL+L  EM    
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +     TY T +  L    +V
Sbjct: 432 IRPTLRTYHTLVSALASAGRV 452



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   +++IL   L +     T+LSLF      G+    YT SIL+N  CK G+V+ 
Sbjct: 115 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 174

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   ++ +   P  V + +LI G C    +  A  +F ++K+    P+ ITYN LIN
Sbjct: 175 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 234

Query: 125 GLCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-----------KP 155
           GLC+      A +L  EM                      G++   F           K 
Sbjct: 235 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 294

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + +++  ++   CK G + +A  +   M Y+++ PN   Y S+I  +  + D  +A  L+
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M + GV  ++V+ N+++  LC++ ++D A  L+  +    +RP+  +YNT++   C  
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G  ++  EL   M   G +    +Y+ L++       V +   LY ++  K ++P+   Y
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +           +   L  EM    +A D
Sbjct: 475 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ +   G
Sbjct: 217 MKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 275

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F +   + +     +V++F S++K  C   +I EA A+   +      PN   YN
Sbjct: 276 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 335

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+    +G T  A  L ++M N           + VTY++++ GLC+   +D+A+EL 
Sbjct: 336 SIIDAYIESGDTEQAFLLVEKMKNSG------VSASIVTYNLLLKGLCRSSQIDEAEELI 389

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             ++ + L P+VV+Y ++I   C+  D ++A  LL EM   G++P + + + +++ L   
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G++ +   L   M+  +V P++  Y  ++D +      ++V  L   M   G   DD
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 192/393 (48%), Gaps = 11/393 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S N LL  L+K+      LS FK +   GL P ++TY+++I C  + G +     +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++VT+ SLI G      +  A ++F ++K  GCEP+VITYN+LIN  C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A     E  +G  + G+  +PN VTYS +ID  CK G + +A + F+ M    L
Sbjct: 334 FERIPQAF----EYLHGMKQRGL--QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI   C   D NEA  L  EM   GV  N+V+   +++ LC++G+M  A  
Sbjct: 388 QPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEE 447

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +++     N   Y +L  G+     + +  ++   M     K D   Y   I G C
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC 507

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  E+E+++++  E+   G+      Y TL    F++ +   A+ L  EMQ   +     
Sbjct: 508 RQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVV 567

Query: 369 TYRTFIDGLC----VRPQVR-FTYARRKGNSGN 396
           TY   IDGLC    V+  VR F +  R G   N
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 203/397 (51%), Gaps = 29/397 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+++GCLA+    +   SLF+ + + GL PD+ TY+ LI+ + K+G ++    +
Sbjct: 249 PSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSV 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   P+V+T+ SLI   C   RI +A      +K  G +PNV+TY+TLI+  C+
Sbjct: 309 FEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368

Query: 129 TGHTIVALNLFKEMT---------------NGN---GEIGVVFKP-----------NTVT 159
            G  + A   F +M                + N   G++   FK            N VT
Sbjct: 369 AGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++DGLC++G + +A+ELF  +       N   YTSL HG+  A    +A  +L EM 
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            + ++P+++     +  LC+  +++++  ++  M+ C +  N++ Y TL+D +   GK  
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M+ +G K    +Y +LI+G CK   V++A+  ++ +   G++P ++ Y  L 
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            GL +    E A  LF EM    ++ D   Y + IDG
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L      +     F ++N   + P + + + L++   K  +  L    
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +  +P+V T+  +I  L  E  +  A +LF ++KA G  P+++TYN+LI+G  +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+++F+EM +   E      P+ +TY+ +I+  CK   + +A E    MK   L
Sbjct: 299 VGMLTGAVSVFEEMKDAGCE------PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY++LI  FC A    EA    ++M+  G+QPN  +   +++  CK G ++ A +
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M Q  V  N  TY  L+DG C  G++   +ELF ++   G   +   Y  L +GY 
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K +E+A+ +  E+  K +KP ++ Y T   GL    + E ++ +  EM    + A++ 
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 369 TYRTFIDG 376
            Y T ID 
Sbjct: 533 IYTTLIDA 540



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 167/345 (48%), Gaps = 6/345 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P    +  L N    +G +      F ++ +    P V +   L+  L   S+   A + 
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G  P+V TYN +I  L R G    A +LF+EM           +P+ VTY+ +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG------LRPDIVTYNSL 292

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG  K G +  A  +F +MK     P+V+TY SLI+ FC      +A   L  M  +G+
Sbjct: 293 IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           QPNVV+ + +++  CK G +  A++    M++  ++PN FTY +L+D  C  G +N   +
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M+  G   +  +Y  L++G C++  + EA  L+  L   G       Y +LFHG  
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           + +  E+A+ +  EM   ++  D   Y T I GLC + ++  + A
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 178/428 (41%), Gaps = 76/428 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K       +S+F+ +   G  PD+ TY+ LINCFCK  ++   F  
Sbjct: 284 PDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEY 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    PNVVT+++LI   C    ++EA   F  +   G +PN  TY +LI+  C+
Sbjct: 344 LHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCK 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG----------------- 171
            G    A  L  EM      +      N VTY+ ++DGLC++G                 
Sbjct: 404 IGDLNEAFKLESEMQQAGVNL------NIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457

Query: 172 ------------------FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN---- 209
                              ++KA ++  +M  +NL P+++ Y + I G C  N+      
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517

Query: 210 -------------------------------EAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
                                          EA  LL EM D G++  VV+  V+++ LC
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G +  A R  D M +  ++PN   Y  L+DG C    +   K LF  M   G   D  
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            Y  LI+G  K+    EALSL N +   G++  +  Y +L  G     Q + A  L  EM
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697

Query: 359 QGNDVAAD 366
               +  D
Sbjct: 698 LRKGIIPD 705



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 14/340 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  LL  L ++        LF  L   G   +   Y+ L + + K   +     I  
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILE 485

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +    P+++ + + I GLC ++ I ++ A+  ++   G   N   Y TLI+   + G
Sbjct: 486 EMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVG 545

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A+NL +EM +    +G+  K   VTY ++IDGLCK G V +A   F  M    L P
Sbjct: 546 KTTEAVNLLQEMQD----LGI--KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQP 599

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++ YT+LI G C  +   EAK L  EM+D+G+ P+ +    +++   K+G    A  L 
Sbjct: 600 NIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLR 659

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + MV+  +  +   Y +L+ GF   G++   K L   M   G   D      L+  Y + 
Sbjct: 660 NRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYEL 719

Query: 311 KEVEEALSLYNELPFKGI--------KPTVVTYNTLFHGL 342
            ++ EAL+L++++  +G+         P+ +T  T  H L
Sbjct: 720 GDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKL 759



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 167/385 (43%), Gaps = 41/385 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K          F  +  +GL P+ +TY+ LI+  CK+G ++  F +
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC---------------- 112
              + ++    N+VT+T+L+ GLC + R+ EA  LF  L   G                 
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473

Query: 113 -------------------EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                              +P+++ Y T I GLCR      ++ + +EM +         
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG------L 527

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N+  Y+ +ID   K G   +A  L  +M+   +   VVTY  LI G C      +A  
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
               M   G+QPN++    +++ LCKN  ++ A  L + M+   + P+   Y +L+DG  
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G       L   M  +G + D  +Y  LI G+ +  +V+ A SL +E+  KGI P  V
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707

Query: 334 TYNTLFHGLFEIRQAERALKLFVEM 358
               L    +E+     AL L  +M
Sbjct: 708 LCICLLRKYYELGDINEALALHDDM 732



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           V +P    +  + + L   G +++A++ F +M    + P V +   L+H    ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
                +MV  G+ P+V + N+++  L + G ++ A  L + M    +RP+  TYN+L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +   G +     +F  M+  GC+ D  +YN LIN +CK + + +A    + +  +G++P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VVTY+TL     +      A K FV+M    +  +  TY + ID  C
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANC 402


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 193/381 (50%), Gaps = 10/381 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L  L K +       LF  +   GL P + TY+ LIN     G V+    +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + +++     PNVVT+T++I  LC E  I +A  LF  +K  G +PN  TYN L++G C+
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L++E+            PN V ++ +IDG CK     +AK +FL+M    +
Sbjct: 269 RDDVNSAVVLYQELLKSG------LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGV 322

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V  Y SL+ G   + +  EA  L  EM   G+ P+  + ++++  LC  G+M  A R
Sbjct: 323 APTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADR 382

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  + +  V  NA  YN L+D +C  G +         M  +G + +  SY+ LI+G+ 
Sbjct: 383 FLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHS 442

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++ A+++Y E+  KGI+P VVTY  L HG  +    + A +L  EM  N ++ +  
Sbjct: 443 KRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAI 502

Query: 369 TYRTFIDGLC----VRPQVRF 385
           T    +DGLC    V+  VRF
Sbjct: 503 TVSVLVDGLCRENRVQEAVRF 523



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 27/390 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L +         LF  +   G+ P+ YTY++L++  C+   V+   V+
Sbjct: 219 PNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVL 278

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L+S   PN V FT+LI G C   R  EA  +F ++  FG  P V  YN+L++G  R
Sbjct: 279 YQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFR 338

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   AL L++EMT     +G+   P+  T SI++ GLC  G +  A      ++ + +
Sbjct: 339 SGNAQEALALYQEMT----RLGLC--PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGV 392

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N N   Y +LI  +C   +  EA      M + G++PNVVS + +++   K GKM  A  
Sbjct: 393 NLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMA 452

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   MV   + PN  TY  L+ G    G I+    L   M   G   +  + ++L++G C
Sbjct: 453 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLC 512

Query: 309 KNKEVEEALSLYNELPFKGIK-------------------PTVVTYNTLFHGLFEIRQAE 349
           +   V+EA+    E  + G+K                   P  V Y TL +GL+   Q  
Sbjct: 513 RENRVQEAVRFVME--YSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHC 570

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            A KLF  M+ + +  D+ TY   I G C+
Sbjct: 571 EAGKLFSYMRKSGMIPDSFTYTLLIRGQCM 600



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 25/341 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F  L+    K K +     +F  +   G+ P +  Y+ L++   + G       +
Sbjct: 289 PNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALAL 348

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + R    P+  T + +++GLC   ++  A      ++  G   N   YN LI+  CR
Sbjct: 349 YQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCR 408

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL     MT    E+G+  +PN V+YS +IDG  K G +  A  ++ +M  + +
Sbjct: 409 IGNLEEALATCTRMT----EVGI--EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGI 462

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTYT+LIHG       + A  L  EM++ G+ PN ++ +V+++ LC+  ++  A R
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522

Query: 249 LL------------------DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            +                   +  +C + PN+  Y TL+ G  L G+     +LF  M  
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEEECLI-PNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK 581

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            G   D F+Y +LI G C    V  A+ LY ++   G+KPT
Sbjct: 582 SGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 58/307 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYT-------------------- 48
           P V  +N L+    ++ +    L+L++ +  +GL PD +T                    
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383

Query: 49  ---------------YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                          Y+ LI+ +C++G +        R+      PNVV+++SLI G   
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK 443

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++  A A++T++ A G EPNV+TY  LI+G  + G    A  L KEM   NG      
Sbjct: 444 RGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIE-NG-----I 497

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQ-----------------MKYENLNPNVVTYT 196
            PN +T S+++DGLC+E  V +A    ++                 ++ E L PN V Y 
Sbjct: 498 SPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYM 557

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LI+G        EA  L   M   G+ P+  +  +++   C  G + NA  L   M++ 
Sbjct: 558 TLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 617

Query: 257 DVRPNAF 263
            V+P  +
Sbjct: 618 GVKPTRY 624


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N++L  L          ++F  + S G+ P +YT+ +++  FC + +V     +
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    PN + +  LI  L   +R+ EA  L  ++   GCEP+V T+N +I+GLC+
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   M   +      F  + +    ++ GLC+ G VD+A+ +  ++     
Sbjct: 283 AGRIHEAAKLHDRMLLRD------FTADALIQGYLMHGLCRMGKVDEARAMLSKIP---- 332

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           NPN V Y +LI+G+  +  + EAK LL + MV  G +P+  + N++++ LCK G + +A 
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LD MV+    PN  TY  L+DGFC  G      ++  SM + G   +   YN LI   
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+ ++++AL +Y E+  KG KP + T+N+L +GL +  + E AL L+ +M    V A+T
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512

Query: 368 CTYRTFI 374
            TY T I
Sbjct: 513 VTYNTLI 519



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 175/343 (51%), Gaps = 11/343 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P  V    ++ G +   +  +    L+K +   G  PD +T++I+I+  CK G +   
Sbjct: 332 PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSA 391

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                 +++  F PNV+T+T LI G C +    EA+ +   + A G   N + YN LI  
Sbjct: 392 LEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G    AL ++ EM++         KP+  T++ +I GLCK   +++A  L+  M  
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGC------KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           E +  N VTY +LIH F       +A  L+ EM  +G   + ++ N ++  LCK G  + 
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              L++ M   ++ P+  + N L++ FC TGK+N   +    M   G   D  +YN LIN
Sbjct: 566 CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL-----FHGLF 343
           G CK    +EAL+L+N L  KGI P  VTYNTL     + GLF
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 184/406 (45%), Gaps = 46/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L K         L  R+       D      L++  C+MG+V     +
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLC 127
             +I      PN V + +LI G     R  EA  L  K +   G EP+  T+N +I+GLC
Sbjct: 328 LSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLC 383

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+ + AL    EM          F+PN +TY+I+IDG CK+G  ++A ++   M  + 
Sbjct: 384 KKGYLVSALEFLDEMVKKG------FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+ N V Y  LI   C      +A  +  EM  +G +P++ + N ++  LCKN KM+ A 
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY------- 300
            L   M+   V  N  TYNTL+  F     I +  +L   M   GC  D+ +Y       
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557

Query: 301 ----------------------------NILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
                                       NILIN +C+  +V +AL    ++  +G+ P +
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VTYN+L +GL ++ + + AL LF  +Q   +  D  TY T I   C
Sbjct: 618 VTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    + +L+  L++N   +  + L + +  +G  PD+ T++ +I+  CK G++  
Sbjct: 229 HGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHE 288

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  R+L   F  + +    L+ GLC   ++ EA A+ +K+      PN + YNTLIN
Sbjct: 289 AAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLIN 344

Query: 125 GLCRTGHTIVALNL-FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           G   +G    A +L +K M          F+P+  T++I+IDGLCK+G++  A E   +M
Sbjct: 345 GYVVSGRFEEAKDLLYKNMVIAG------FEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             +   PNV+TYT LI GFC    + EA  ++  M  +G+  N V  N ++  LCK+GK+
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            +A ++   M     +P+ +T+N+L+ G C   K+     L+  M   G   +  +YN L
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+ + + + +++A  L  E+ F+G     +TYN L   L +    E+ L L  +M G ++
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578

Query: 364 AADTCTYRTFIDGLCVRPQV 383
                +    I+  C   +V
Sbjct: 579 FPSINSCNILINSFCRTGKV 598



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 170/332 (51%), Gaps = 6/332 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FNI++  L K  +  + L     +   G  P++ TY+ILI+ FCK G       +
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     + N V +  LI  LC + +I +A  ++ ++ + GC+P++ T+N+LI GLC+
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   NTVTY+ +I    +   + +A +L  +M++   
Sbjct: 490 NDKMEEALGLYRDMLLE----GVI--ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C      +  GL+ +M  + + P++ S N+++N  C+ GK+++A +
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQ 603

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+Q  + P+  TYN+L++G C  G+      LF  +++ G   D  +YN LI+ YC
Sbjct: 604 FLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                 +A  L  +    G  P  +T++ L +
Sbjct: 664 YEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 5/229 (2%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F+P   +Y+++++ L        A  +F  M    ++P V T+  ++  FC  N+ + A 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL +M   G  PN +   ++++ L +N +++ A +LL+ M      P+  T+N ++ G 
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G+I+   +L   M       D      L++G C+  +V+EA ++ +++P     P  
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336

Query: 333 VTYNTLFHGLFEIRQAERALKLFVE-MQGNDVAADTCTYRTFIDGLCVR 380
           V YNTL +G     + E A  L  + M       D  T+   IDGLC +
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 19/214 (8%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQV 62
           +L G +A    Y+T++  F RL  I             G   D  TY+ LI   CK G  
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +  ++      P++ +   LI   C   ++ +A      +   G  P+++TYN+L
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           INGLC+ G    ALNLF      NG       P+ VTY+ +I   C EG  + A +L  +
Sbjct: 624 INGLCKMGRFQEALNLF------NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFK 677

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
                  PN +T++ LI+ F   N  +E   +L+
Sbjct: 678 GVSNGFIPNEITWSILINYFVKNNSDSEQFTILM 711


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 185/370 (50%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL   AK    D V   FK +   G  P ++TY+I+I+C CK G V     +
Sbjct: 58  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGL 117

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+ S+I G     R+ +    F ++K   CEP+VITYN LIN  C+
Sbjct: 118 FEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 177

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L  F+EM   NG      KPN V+YS ++D  CKEG + +A + ++ M+   L
Sbjct: 178 FGKLPKGLEFFREMKR-NG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 231

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSLI  +C   + ++A  L  EM+  GV+ NVV+   +++ LC          
Sbjct: 232 VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLH 291

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-SMGCKHDDFSYNILINGY 307
           LLD MV+ D++    T+  L+DG C    +++  + F  +    G + +   Y  +I+G 
Sbjct: 292 LLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 351

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +VE A +L+ ++  KG+ P    Y +L  G F+      AL L  +M    +  D 
Sbjct: 352 CKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDL 411

Query: 368 CTYRTFIDGL 377
             Y + + GL
Sbjct: 412 LAYTSLVWGL 421



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 151/305 (49%), Gaps = 6/305 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P    F +L   L     + EA   F+K+K F   P   + N L++   + G T 
Sbjct: 18  RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                FK+M      IG   KP   TY+I+ID +CKEG V+ A+ LF +MK+  L P+ V
Sbjct: 78  GVKRFFKDM------IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTV 131

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY S+I GF      ++      EM D   +P+V++ N ++N  CK GK+         M
Sbjct: 132 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM 191

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  ++PN  +Y+TL+D FC  G + +  + +V M  +G   ++++Y  LI+ YCK   +
Sbjct: 192 KRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNL 251

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A  L NE+   G++  VVTY  L  GL         L L  EM   D+     T+   
Sbjct: 252 SDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311

Query: 374 IDGLC 378
           IDGLC
Sbjct: 312 IDGLC 316



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 166/347 (47%), Gaps = 7/347 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    D  +  F+ +  +   PD+ TY+ LINCFCK G++  G   
Sbjct: 128 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R+   PNVV++++L+   C E  + +A   +  ++  G  PN  TY +LI+  C+
Sbjct: 188 FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L  EM     ++GV +  N VTY+ +IDGLC      +   L  +M   ++
Sbjct: 248 IGNLSDAFRLANEML----QVGVEW--NVVTYTALIDGLCGWENPTEGLHLLDEMVELDI 301

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              VVT+  LI G C     ++A      +  D G+Q N      +++ LCK  +++ A+
Sbjct: 302 KVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAAT 361

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L + M Q  + P+   Y +LMDG    G +     L   M   G K D  +Y  L+ G 
Sbjct: 362 TLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGL 421

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
               ++++A S   E+  +GI P  V   ++    +E+     A++L
Sbjct: 422 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 7/342 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P    +  L +    +G V      F ++ R    P   +   L+       +       
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G +P V TYN +I+ +C+ G    A  LF+EM       G++  P+TVTY+ +
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR----GLI--PDTVTYNSM 136

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG  K G +D     F +MK     P+V+TY +LI+ FC      +      EM   G+
Sbjct: 137 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGL 196

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PNVVS + +++  CK G M  A +    M +  + PN +TY +L+D +C  G ++    
Sbjct: 197 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFR 256

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M  +G + +  +Y  LI+G C  +   E L L +E+    IK TVVT+  L  GL 
Sbjct: 257 LANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLC 316

Query: 344 EIRQAERALKLFVEMQGN-DVAADTCTYRTFIDGLCVRPQVR 384
           + +   +A+  F  +  +  + A+   Y   IDGLC   QV 
Sbjct: 317 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVE 358


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 190/374 (50%), Gaps = 9/374 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SFN+++  L K    D  + +F+ +      PD YTY  L++  CK  ++    ++   +
Sbjct: 189 SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +P+ V +  LI GLC +  +     L   +   GC PN +TYNTLI+GLC  G  
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++L + M +          PN VTY  +I+GL K+        L + M+      N 
Sbjct: 309 DKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQ 362

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y+ LI G        EA  L  +M ++G +PN+V  + +++ LC+ GK + A  +L+ 
Sbjct: 363 HIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNG 422

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+     PN +TY++LM GF  TG      +++  M+  GC  ++F Y++LI+G C    
Sbjct: 423 MISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGR 482

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM---QGNDVAADTCT 369
           V+EA+ +++++   GIKP  V Y+++  GL  I   + ALKL+ EM   +      D  T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542

Query: 370 YRTFIDGLCVRPQV 383
           Y   +DGLC++  V
Sbjct: 543 YNILLDGLCMQKDV 556



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 180/354 (50%), Gaps = 10/354 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP PV  +N+L+  L K      V  L   +   G FP+  TY+ LI+  C  G++    
Sbjct: 254 SPSPVI-YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  R++ S   PN VT+ +LI GL  + R ++ A L   ++  G   N   Y+ LI+GL
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGL 372

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A+ L+K+M     E G   +PN V YS +IDGLC+EG  ++AKE+   M   
Sbjct: 373 FKEGKAEEAMTLWKKM----AEKGC--RPNIVVYSAVIDGLCREGKPNEAKEILNGMISS 426

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNV TY+SL+ GF       EA  +  EM + G   N    +V+++ LC  G++  A
Sbjct: 427 GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEA 486

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNIL 303
             +   M+   ++P+   Y++++ G C  G ++   +L+  M   E    + D  +YNIL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           ++G C  K+V  A+ L N +  +G  P V+T NT  + L E   +    + F+E
Sbjct: 547 LDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLE 600



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 3/281 (1%)

Query: 99  EAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           +A  LF ++   F C+ +V ++N+++N +   G     L  +  + N N  + +   PN 
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           ++++++I  LCK GFVD+A E+F  M  +   P+  TY +L+ G C     +EA  LL E
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  +G  P+ V  NV+++ LCK G +   ++L+D M      PN  TYNTL+ G CL GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGK 307

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +++   L   M S  C  +D +Y  LING  K +   +   L   +  +G +     Y+ 
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSV 367

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  GLF+  +AE A+ L+ +M       +   Y   IDGLC
Sbjct: 368 LISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLC 408



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 30/290 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L+  L K    +  ++L+K++   G  P++  YS +I+  C+ G+ +    I   ++
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S   PNV T++SL+KG        EA  ++ ++   GC  N   Y+ LI+GLC  G   
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---KYENLNP 190
            A+ ++ +M      IG+  KP+TV YS +I GLC  G +D A +L+ +M   +     P
Sbjct: 485 EAMMVWSKMLT----IGI--KPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL------CKNG--- 241
           +VVTY  L+ G C   D + A  LL  M+D+G  P+V++ N  +N L      C+ G   
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSF 598

Query: 242 ------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
                       ++  A +++++M+   + P   T+  ++   C   KIN
Sbjct: 599 LEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKIN 648



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 5/236 (2%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           FK    T S +I+     G     ++L  +++ EN      ++  +   +  A+   +A 
Sbjct: 73  FKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAV 132

Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD----VRPNAFTYNT 267
            L   MVD+   + +V S N ++N +   G         D +V  +    + PN  ++N 
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++   C  G ++R  E+F  M    C  D ++Y  L++G CK + ++EA+ L +E+  +G
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P+ V YN L  GL +     R  KL   M       +  TY T I GLC++ ++
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 18/181 (9%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L+  L         + ++ ++ +IG+ PD   YS +I   C +G +     ++  +L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529

Query: 74  ---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL---- 126
                   P+VVT+  L+ GLC +  +  A  L   +   GC+P+VIT NT +N L    
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS 589

Query: 127 --CRTGHT----IVALNLFKEMTNGNGEI-----GVVFKPNTVTYSIIIDGLCKEGFVDK 175
             C  G +    +VA  L ++  +G  +I     G    P T T+++I+  +CK   ++ 
Sbjct: 590 DSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINA 649

Query: 176 A 176
           A
Sbjct: 650 A 650


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 199/378 (52%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  L ++      L +F  +  +G+ P+  TY+ +I+   K G +  G
Sbjct: 189 APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG 248

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  ++L     PN+VT+  L+ GLC   R+ E   L  ++ +    P+  TY+ L +G
Sbjct: 249 FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 308

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L RTG +   L+LF E       +G        T SI+++GLCK+G V KA+++   + +
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKVAKAEQVLEMLVH 362

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   D   A  +  +M  + ++P+ ++ N ++N LCK   +  
Sbjct: 363 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 422

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  M +  V P+  T+NTL+D +   G++ +   +   M+  G K D  S+  ++ 
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++ +K + P    YN++     E    E+A  L  +M+ + V+A
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   + GLC   Q+
Sbjct: 543 SIVTYNLLLKGLCRSSQI 560



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 7/381 (1%)

Query: 4   MHPSPPP-VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P P + ++N+LL  L +    D    L   + S  +FPD +TYSIL +   + G+ 
Sbjct: 256 LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F   L+        T + L+ GLC + ++ +A  +   L   G  P  + YNTL
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 375

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           ING C+      A  +F++M + +       +P+ +TY+ +I+GLCK   V KA++L ++
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   ++P+V T+ +LI  +  A    +   +L +M  +G++ +V+S   ++   CKNGK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +LD M+  DV PNA  YN+++D +  +G   +   L   M++ G      +YN+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G C++ +++EA  L   L  +G++P VV+YNT+          ++AL+L  EM    
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +     TY T +  L    +V
Sbjct: 610 IRPTLRTYHTLVSALASAGRV 630



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 9/375 (2%)

Query: 7   SP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP P +SS N+LL  L     +  V + F  L + G  PD + ++ ++      G + + 
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176

Query: 66  FVIFGRILRSCFAP--NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             +  R+ RS  AP  +  ++  +I GL    +  +A  +F ++   G  PN ITYNT+I
Sbjct: 177 LAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMI 236

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G       L  +M +         KPN VTY++++ GLC+ G +D+ + L  +M
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGP------KPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              ++ P+  TY+ L  G     +      L  E + +GV     + ++++N LCK+GK+
Sbjct: 291 ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A ++L+++V   + P    YNTL++G+C    +     +F  M+S   + D  +YN L
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ING CK + V +A  L  E+   G+ P+V T+NTL        Q E+   +  +MQ   +
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 364 AADTCTYRTFIDGLC 378
            +D  ++ + +   C
Sbjct: 471 KSDVISFGSVVKAFC 485



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   +++IL   L +     T+LSLF      G+    YT SIL+N  CK G+V+ 
Sbjct: 293 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   ++ +   P  V + +LI G C    +  A  +F ++K+    P+ ITYN LIN
Sbjct: 353 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 125 GLCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-----------KP 155
           GLC+      A +L  EM                      G++   F           K 
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + +++  ++   CK G + +A  +   M Y+++ PN   Y S+I  +  + D  +A  L+
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 532

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M + GV  ++V+ N+++  LC++ ++D A  L+  +    +RP+  +YNT++   C  
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G  ++  EL   M   G +    +Y+ L++       V +   LY ++  K ++P+   Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +           +   L  EM    +A D
Sbjct: 653 GIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 145/297 (48%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ +   G
Sbjct: 395 MKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F +   + +     +V++F S++K  C   +I EA A+   +      PN   YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I+    +G T  A  L ++M N           + VTY++++ GLC+   +D+A+EL 
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSG------VSASIVTYNLLLKGLCRSSQIDEAEELI 567

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             ++ + L P+VV+Y ++I   C+  D ++A  LL EM   G++P + + + +++ L   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G++ +   L   M+  +V P++  Y  ++D +      ++V  L   M   G   DD
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 202/381 (53%), Gaps = 16/381 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKN---KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           M H  P  P  +++N L+  L +    +H    LSL  R    G  PD +T++ LI  +C
Sbjct: 119 MYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVR---SGWRPDAFTFNSLILGYC 175

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +  Q+ +   +F ++    F+ + V++ +LI+G C   R+ EA  LF +L+    +P++ 
Sbjct: 176 RTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMY 231

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           T+  L+ GLC        L + ++M     E+G  ++P T  Y+ ++D  C+E   ++A+
Sbjct: 232 THAALVKGLCDARRGEEGLYMLQKMK----ELG--WRPATRAYAALVDLWCREQKAEEAE 285

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ++  +M    L P  VT T++++ +C     + A  +   M  +G +PNV + N ++   
Sbjct: 286 KMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGF 345

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C  GK+  A  LLD M +C V P+  TYN L+ G C+ G I     L   ME  G   D 
Sbjct: 346 CNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQ 405

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           ++YN+LI+  CK  +V+EA SL++ L ++GI+P  VT+NT+ +GL +  + + A     +
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEK 465

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M     A DT TY  FI+ LC
Sbjct: 466 MVSAGCAPDTYTYSPFIENLC 486



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 179/369 (48%), Gaps = 10/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+    + +  D    LF ++   G   D  +Y+ LI  FC+ G+V     +
Sbjct: 162 PDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALEL 221

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F    R    P++ T  +L+KGLC   R  E   +  K+K  G  P    Y  L++  CR
Sbjct: 222 F----RELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCR 277

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  EM + NG +     P  VT + +++  C+EG +  A  +F  MK +  
Sbjct: 278 EQKAEEAEKMLNEMFD-NGLV-----PCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC 331

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY +++ GFC+     +A  LL +M + GV+P+VV+ N+++   C +G +++A R
Sbjct: 332 EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR 391

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL LM    +  + +TYN L+D  C TGK++    LF  +E  G + +  ++N +ING C
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + + A +   ++   G  P   TY+     L + + +   L    EM   DV   T 
Sbjct: 452 KGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTV 511

Query: 369 TYRTFIDGL 377
            Y   ID L
Sbjct: 512 NYTIVIDRL 520



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 8/353 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    + +  +    +   +   GL P   T + ++N +C+ G++S    +
Sbjct: 263 PATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRV 322

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F  + L+ C  PNV T+ ++++G C   ++ +A AL  +++  G EP+V+TYN LI G C
Sbjct: 323 FESMKLKGC-EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             GH   A  L + M  GNG        +  TY+++ID LCK G VD+A  LF  ++Y  
Sbjct: 382 IDGHIESAFRLLRLM-EGNG-----LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN VT+ ++I+G C    ++ A   L +MV  G  P+  + +  +  LCK        
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             +D M+Q DV+P+   Y  ++D             ++  M S+GC  D  +Y   +  Y
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           C    + EA ++  E+   GI    + YNTL  G   I + + A+ +   M G
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTG 608



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 184/420 (43%), Gaps = 57/420 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+     + H ++   L + +   GL  D YTY++LI+  CK G+V     +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTF ++I GLC   +   A     K+ + GC P+  TY+  I  LC+
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T  +   L+   EM   +       KP+TV Y+I+ID L KE     A  ++ QM     
Sbjct: 488 TKGSREGLSFIDEMLQKD------VKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+VVTYT+ +  +C+    +EA+ +++EM   G+  + ++ N +++     GK D+A  
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601

Query: 249 LLDLMVQCDVRPNAFT-------------------------------------------- 264
           +L  M      PN FT                                            
Sbjct: 602 ILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNS 661

Query: 265 -------YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
                  Y  +++GF    +++ V  L   M+      ++  Y  L+N +CK +   +A 
Sbjct: 662 VPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAW 721

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L   +   G  P +++Y  L  G     QA+RA ++F  ++  +   D   ++  IDGL
Sbjct: 722 ALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGL 781



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 10/283 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P   TYN LI  LCR      A      M          ++P+  T++ +I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSG------WRPDAFTFNSLILGYCRTQQL 180

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D A++LF +M     + + V+Y +LI GFC     +EA    +E+  +  QP++ +   +
Sbjct: 181 DVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA----LELFRELEQPDMYTHAAL 236

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  LC   + +    +L  M +   RP    Y  L+D +C   K    +++   M   G 
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                +   ++N YC+   +  A+ ++  +  KG +P V TYN +  G   + +  +A+ 
Sbjct: 297 VPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
           L  +M+   V  D  TY   I G C+   +   +   +   GN
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGN 399



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 157/385 (40%), Gaps = 57/385 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--GQVSLGF 66
           P   +FN ++  L K   +D   +  +++ S G  PD YTYS  I   CK    +  L F
Sbjct: 438 PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSF 497

Query: 67  V---------------------------------IFGRILRSCFAPNVVTFTSLIKGLCA 93
           +                                 I+G+++    +P+VVT+T+ ++  C 
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCN 557

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R+ EA  +  ++K  G   + + YNTLI+G    G T  A+ + K MT      GV  
Sbjct: 558 EGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT------GVAS 611

Query: 154 KPNTVTYSIII----------DGLCKEGFVDKAKEL------FLQMKYENLNPNVVTYTS 197
            PN  T+ I++          D   K   V K  EL      F  MK  ++  +   Y +
Sbjct: 612 MPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLA 671

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           ++ GF      +E   L+  M +  +  N      ++N  CK     +A  LL  M+   
Sbjct: 672 ILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHG 731

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             PN  +Y  L+ GF   G+ +R KE+F  +       D+  + I+I+G  +    +   
Sbjct: 732 FLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCH 791

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGL 342
            + + L     KP+  TY  L   L
Sbjct: 792 DMISILEQMKCKPSDETYAMLTEEL 816



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++  +L   ++ +  D V SL   +    L  +   Y+ L+NCFCK+      + 
Sbjct: 663 PSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWA 722

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++   F PN++++  L+ G  AE +   A  +F  L+      + I +  +I+GL 
Sbjct: 723 LLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLI 782

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           R GH  +  ++   +        +  KP+  TY+++ + L
Sbjct: 783 RQGHPDMCHDMISILEQ------MKCKPSDETYAMLTEEL 816


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 187/377 (49%), Gaps = 12/377 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP  S+FN LL  LA+      +  LF  +    + P++ TY IL+   CK G+V     
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193

Query: 68  IFGRI--LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK--LKAFGCEPNVITYNTLI 123
           +   +    S   P+VV   +++ GLC   R+ +A     +      GC PN +TYN L 
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +  CR G+  +A  L  +M            PN VT + I+ GLC  G V  A E F + 
Sbjct: 254 HAFCRAGNVGMACELVAKMEKER------VTPNAVTLNTIVGGLCWVGRVGAALEFFREK 307

Query: 184 K--YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +  +     N VTY++L+  F H N+   A  L  EMVD+G  P+ +    +++ L + G
Sbjct: 308 RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAG 367

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           ++D+A  +   M +   + +A  YN L+ GFC   ++N   EL   M+  G + D ++YN
Sbjct: 368 RLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYN 427

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            L++G CK  +      L  ++   G +P+VVT+ TL HG  ++ Q + AL++F  M  +
Sbjct: 428 TLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487

Query: 362 DVAADTCTYRTFIDGLC 378
            +  +T  Y T ID LC
Sbjct: 488 GIQPNTVIYNTLIDFLC 504



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 180/369 (48%), Gaps = 11/369 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           NI+ G     +    V  + +R+ S+ G  P+  TY+ L + FC+ G V +   +  ++ 
Sbjct: 214 NIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKME 273

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--NVITYNTLINGLCRTGH 131
           +    PN VT  +++ GLC   R+  A   F + +    E   N +TY+TL+     T +
Sbjct: 274 KERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNN 333

Query: 132 TIVALNLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             VA+ LF EM + GN        P+ + Y  +I GL + G +D A  +   MK      
Sbjct: 334 VGVAMELFHEMVDEGN-------SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQL 386

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +   Y  LI GFC     NEA  LL EM + G+QP+V + N +++ LCK G       LL
Sbjct: 387 DAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELL 446

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+    RP+  T+ TL+ G+C  G+I+    +F SM+  G + +   YN LI+  CK+
Sbjct: 447 GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKS 506

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           ++   A+ L++E+  K +   V T+N L  GL +    E+A +L   M+      D  T 
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTI 566

Query: 371 RTFIDGLCV 379
              ++ L V
Sbjct: 567 DILMEWLPV 575



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 6/140 (4%)

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  L D +      P+   +NTL+D     G +  + +LF SM     + +  +Y IL
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 304 INGYCKNKEVEEALSLYNEL--PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           + G CK   V +ALS+ + +  P   + P VV  N +  GL +  + ++A+K FVE +  
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVK-FVEERMR 237

Query: 362 DV---AADTCTYRTFIDGLC 378
            V   A +T TY       C
Sbjct: 238 SVHGCAPNTVTYNCLAHAFC 257


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+   ++N+H D  L  F+ +   GL PD   Y++L++ +C+ G +     I
Sbjct: 256 PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 315

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +V+ + +++ GLC E  + +A  LF ++   G  P+  T+ TLI+G C+
Sbjct: 316 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 375

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+LF  MT  N       KP+ V Y+ +IDG CK G ++KA EL+  M    +
Sbjct: 376 DGNMTKALSLFGTMTQRN------IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY  LI+ +C     +EA  L   M+++G++P +V+ N ++   C++G    A  
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   V P+  +YNTL++GF     +++       ME  G   D  +YN+++NG+C
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +   ++EA  +  ++  KGI P   TY  L +G         A +   EM     A D
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 193/402 (48%), Gaps = 41/402 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L K+  +D V S    +   G++ D+ TY+ LI  +C+ G +   F I  
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P++ T+ ++I GLC + R   A  +  ++   G  P+  TYNTL+   CR  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  +F EM       GVV  P+ V++S +I    +   +D+A   F  MK   L P
Sbjct: 238 NFSEAKEIFGEMLRQ----GVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP 291

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + V YT L+HG+C   +  EA  +  EM++QG   +V++ N I+N LCK   + +A +L 
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351

Query: 251 DLMV-----------------------------------QCDVRPNAFTYNTLMDGFCLT 275
           D MV                                   Q +++P+   YNTL+DGFC  
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 411

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G++ +  EL+  M S     +  +Y ILIN YC    V EA  L++ +  KGIKPT+VT 
Sbjct: 412 GEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTC 471

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           NT+  G      + +A +    M    VA D  +Y T I+G 
Sbjct: 472 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 191/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K   Y     +   + +IGL PD  TY+ L+   C+    S    I
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 245

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +LR    P++V+F+SLI        + +A   F  +K FG  P+ + Y  L++G CR
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 305

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ + AL +  EM     E G V   + + Y+ I++GLCKE  +  A +LF +M     
Sbjct: 306 NGNMLEALKIRDEML----EQGCVL--DVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T+T+LIHG C   +  +A  L   M  + ++P++V+ N +++  CK G+M+ AS 
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   + PN  TY  L++ +C  G ++    L+  M   G K    + N +I GYC
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++ +  +A      +  KG+ P  ++YNTL +G       ++A     +M+   +  D  
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDII 539

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   ++G C + +++
Sbjct: 540 TYNVVMNGFCRQGRMQ 555



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            P  +++N LL    +  ++     +F  +   G+ PDL ++S LI  F +   +    V
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F  + +    P+ V +T L+ G C    ++EA  +  ++   GC  +VI YNT++NGLC
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  LF EM     E G +  P+  T++ +I G C++G + KA  LF  M   N
Sbjct: 340 KEKMLTDADKLFDEMV----ERGAL--PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 393

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P++V Y +LI GFC   +  +A  L   M+ + + PN ++  +++N  C  G +  A 
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 453

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL D+M++  ++P   T NT++ G+C +G  ++  E    M + G   D  SYN LING+
Sbjct: 454 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +   +++A    N++  +G+ P ++TYN + +G     + + A  +  +M    +  D 
Sbjct: 514 VREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDR 573

Query: 368 CTYRTFIDG 376
            TY   I+G
Sbjct: 574 STYTALING 582



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+    + +        F+ L S G    +   + L+    K+  V L + +   ++
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RS    NV T   ++  LC + +  +  +  ++++  G   +++TYNTLI   CR G   
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +   M +         KP+  TY+ II+GLCK+G   +AK + ++M    L+P+  
Sbjct: 171 EAFEIMNSMADKG------LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L+   C  ++++EAK +  EM+ QGV P++VS + ++    +N  +D A      M
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + P+   Y  LM G+C  G +    ++   M   GC  D  +YN ++NG CK K +
Sbjct: 285 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A  L++E+  +G  P   T+ TL HG  +     +AL LF  M   ++  D   Y T 
Sbjct: 345 TDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 404

Query: 374 IDGLC 378
           IDG C
Sbjct: 405 IDGFC 409



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 6/287 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N +L  L K K       LF  +   G  PD YT++ LI+  C+ G ++    +FG
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +    P++V + +LI G C    + +A+ L+  + +    PN ITY  LIN  C  G
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVG 447

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           H   A  L+  M     E G+  KP  VT + +I G C+ G   KA E   +M  + + P
Sbjct: 448 HVSEAFRLWDVMI----EKGI--KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + ++Y +LI+GF   ++ ++A   + +M  +G+ P++++ NV+MN  C+ G+M  A  +L
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
             M++  + P+  TY  L++G      +N        M   G   DD
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 6/220 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K    +    L+  + S  +FP+  TY ILIN +C +G VS  F +
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     P +VT  ++IKG C      +A     ++ A G  P+ I+YNTLING  R
Sbjct: 456 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVR 515

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A     +M            P+ +TY+++++G C++G + +A+ +  +M  + +
Sbjct: 516 EDNMDKAFLWINKMEKEG------LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           NP+  TYT+LI+G    ++ NEA     EM+ +G  P+ V
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 92/194 (47%)

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N   N + +  LI  +  A    E       +  +G   ++ + N ++  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +   +V+  +  N +T N +++  C  GK + VK     ME  G   D  +YN LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC+   +EEA  + N +  KG+KP++ TYN + +GL +  +  RA  + +EM    ++ D
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 367 TCTYRTFIDGLCVR 380
           T TY T +   C R
Sbjct: 223 TTTYNTLLVESCRR 236


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 6/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  +N L+    +    D    +   +   G+ P++ TY+  I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  ++R+    +VVT ++L+ GLC + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K+       +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN VTYT LI   C A++ +EA+ +L+EM ++ + PNVV+ + ++N   K G +D A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
               +M +  + PN  TY TL+DGF      +   E++  M   G K + F  + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +N ++EEA++L+ +    G+    V Y TL  GLF+      A K   E+   ++  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 368 CTYRTFIDGLCV 379
             Y  FI+ LC+
Sbjct: 555 VVYNVFINCLCM 566



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 178/395 (45%), Gaps = 41/395 (10%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L +N   +  ++LFK  +  GL  D   Y+ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ V +   I  LC   +  EA +  T+++  G +P+  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-- 194
            L  EM   +       KPN +TY+ ++ GL   G V+KAK L  +M     +P+ +T  
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 195 ---------------------------------YTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                                            Y +L+   C+     +A  +L EM+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P+ ++ N ++   CK+  +DNA      M+  ++ PN  T+NTL+ G    G+I   
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             + + ME  G + ++ +Y+IL  G+ K     EA+ LY E+  KG  P V TYN L   
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +     +A +LF +MQ   V   +CTY   + G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 182/401 (45%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + + L+  L ++  +    +LF+ ++ +G  P+  TY  LI+   K G+      + G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++      ++VT+T+L+  L  + +  E         +    PN +TY  LI+ LC+  
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  +  EM   +        PN VT+S +I+G  K G +DKA E    MK   +NP
Sbjct: 394 NVDEAEQVLLEMEEKS------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
           NVVTY +LI GF      + A  +  +M+ +GV+ N    + ++N L +NGK++ A    
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 247 ---------------SRLLDLMVQCDVRPNAF----------------TYNTLMDGFCLT 275
                          + L+D + +    P AF                 YN  ++  C+ 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK    K     M +MG K D  +YN +I  +C+  E  +AL L +E+    IKP ++TY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  GLF     E+A  L  EM     +  + T+R  +  
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 190/428 (44%), Gaps = 45/428 (10%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLS-LFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +  S P   ++NILL  L+ + H   VL+ + KR    G+  D  T + L+   C+ GQV
Sbjct: 96  LRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKR----GVPFDGVTVNTLLAGLCRNGQV 151

Query: 63  S------------------------LGFVIFG----------RILRSCFAPNVVTFTSLI 88
                                    L    FG          R+       +VV + +L+
Sbjct: 152 DAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
            G C   ++  A  +   +K  G +PNV TY   I   CRT     A +L++ M      
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN--- 268

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            GV+   + VT S ++ GLC++G   +A  LF +M      PN VTY +LI     A   
Sbjct: 269 -GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRG 325

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            E   LL EMV +GV  ++V+   +M+ L K GK D     L   +  ++ PN  TY  L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +D  C    ++  +++ + ME      +  +++ +ING+ K   +++A      +  +GI
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            P VVTY TL  G F+ +  + AL+++ +M    V  +     + ++GL    ++    A
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 389 RRKGNSGN 396
             K  SG+
Sbjct: 506 LFKDASGS 513



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 29/405 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L K    D V    +   S  L P+  TY++LI+  CK   V     +   +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNVVTF+S+I G      + +A      +K  G  PNV+TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 133 IVALNLFKEM---------------TNG---NGEI-----------GVVFKPNTVTYSII 163
             AL ++ +M                NG   NG+I           G     + V Y+ +
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGL K G +  A +   ++   N+ P+ V Y   I+  C    + EAK  L EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P+  + N ++   C+ G+   A +LL  M    ++PN  TYNTL+ G   TG + + K 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M S G      ++  ++    +++ ++  L ++  +   G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +A  +  EM G+ +A DT T+   I G C    +   +A
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 168/383 (43%), Gaps = 44/383 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ + CL     +    S    + ++GL PD  TY+ +I   C+ G+ +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT---------- 118
              +  S   PN++T+ +L+ GL     + +A  L  ++ + G  P+ +T          
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 119 -------------------------YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                    YNTL+  LC  G T  A  + +EM      +G   
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGI 725

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+T+T++ +I G CK   +D A   + QM ++N++PN+ T+ +L+ G        EA  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +LIEM   G++PN ++ +++     K      A RL   MV     P   TYN L+  F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G + + KELF  M+  G      +Y+IL++G+ + +   E      ++  KG  P+  
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 334 TYNTL---FHGLFEIRQAERALK 353
           T + +   F       QA+R LK
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 141/350 (40%), Gaps = 49/350 (14%)

Query: 71  RILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           R+LR   A      P  V +  L   L A S    A A+  ++   G   + +T NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNIL---LAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 125 GLCRTGH----------------------------------TIVALNLFKEMTNGNGEIG 150
           GLCR G                                   T  AL++   MT     + 
Sbjct: 144 GLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMD 203

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           V      V Y+ ++ G C+ G VD A+ +   MK   ++PNV TYT  I  +C      E
Sbjct: 204 V------VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L   MV  GV  +VV+ + ++  LC++G+   A  L   M +    PN  TY TL+D
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
                G+   +  L   M S G   D  +Y  L++   K  + +E            + P
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSP 377

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             VTY  L   L +    + A ++ +EM+   ++ +  T+ + I+G   R
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 6/320 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P + ++N L+  L      +    L   + S G  P   T+  ++    +  ++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I   ++ +    ++  + +L++ LC      +A  +  ++   G  P+ IT+N LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C++ H   A   + +M + N        PN  T++ ++ GL   G + +A  + ++M
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQN------ISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           +   L PN +TY  L  G    ++  EA  L  EMV +G  P V + N ++++  K G M
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  L   M +  V P + TY+ L+ G+        VK+    M+  G      + + +
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910

Query: 304 INGYCKNKEVEEALSLYNEL 323
              + K     +A  L   L
Sbjct: 911 CRAFSKPGMTWQAQRLLKNL 930


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 6/292 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++ G   +  + E   L   + A G  PN   +N   +   + G    A+++F +M    
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   P+ V+Y  +ID LCK G VD A+  F QM  E + PN+V ++SL++G C  +
Sbjct: 61  ------LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSID 114

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            W + + L  EM++ G+ PN+V  N I+  LCK G++    RL+D +    VRP+  +YN
Sbjct: 115 KWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYN 174

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+DG CL G I+   +L   M S+G K + FSYN L++GYCK   ++ A SL+ ++   
Sbjct: 175 TLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSN 234

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GI P VVTYNT+ HGLF+ ++   A +L++ M  +       TY T ++GLC
Sbjct: 235 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLC 286



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FNI     AK    D  + +F ++   GL PD  +Y  LI+  CK+G+V    V F +++
Sbjct: 33  FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN+V F+SL+ GLC+  +  +   LF ++   G  PN++ +NT++  LC+ G  +
Sbjct: 93  NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 152

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
               L   +      +GV  +P+ ++Y+ +IDG C  G +D+A +L   M    L PN  
Sbjct: 153 EGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSF 206

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y +L+HG+C A   + A  L  +M+  G+ P VV+ N I++ L +  +   A  L   M
Sbjct: 207 SYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 266

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +    +   +TYNT+++G C +  ++   ++F S+ S G + +  ++ I+I    K    
Sbjct: 267 INSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 326

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A+ L+  +P  G+ P VVTY  +   L E    E    LF  M+ N  A ++      
Sbjct: 327 EDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 386

Query: 374 IDGLCVRPQV 383
           +  L  R  +
Sbjct: 387 VRRLLHRGDI 396



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+ P+ + ++I  + + K G +     IF ++ +   +P+ V++ +LI  LC   R+ +A
Sbjct: 25  GISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDA 84

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              F ++   G  PN++ +++L+ GLC          LF EM N      V   PN V +
Sbjct: 85  EVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN------VGIHPNIVFF 138

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + I+  LCKEG V + + L   ++   + P+V++Y +LI G C A   +EA  LL  MV 
Sbjct: 139 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 198

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G++PN  S N +++  CK G++D+A  L   M+   + P   TYNT++ G   T + + 
Sbjct: 199 VGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 258

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            KEL+++M + G K   ++YN ++NG CK+  V+EA  ++  L  KG++  ++T+  +  
Sbjct: 259 AKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 318

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L +  + E A+ LF  +  N +  D  TYR   + L
Sbjct: 319 ALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENL 355



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 6/311 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN +L  L K         L   +  +G+ PD+ +Y+ LI+  C  G +     +
Sbjct: 133 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 192

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN  ++ +L+ G C   RI  A +LF K+ + G  P V+TYNT+++GL +
Sbjct: 193 LEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQ 252

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T     A  L+  M N   + G+       TY+ I++GLCK   VD+A ++F  +  + L
Sbjct: 253 TKRFSEAKELYLNMINSGTKWGIY------TYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N++T+T +I          +A  L   +   G+ P+VV+  V+   L + G ++    
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +    PN+   N L+      G I+R       ++      +  + ++LI+ + 
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 426

Query: 309 KNKEVEEALSL 319
            ++    A SL
Sbjct: 427 SDEYQHHAKSL 437



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 106/226 (46%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G   +G + +  +L   M    ++PN   +      +      ++A  +  +M   G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P+ VS   +++ LCK G++D+A    + M+   V PN   +++L+ G C   K  +V+
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ELF  M ++G   +   +N ++   CK   V E   L + +   G++P V++YNTL  G 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 + A KL   M    +  ++ +Y T + G C   ++   Y+
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYS 226


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 198/430 (46%), Gaps = 44/430 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D V  L + +   G   D+ TY+ LINCFCK G++   +  
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R     NVVTF++ +   C E  + EA  LF +++  G   N  TY  LI+G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  EM       GV    N VTY++++DGLCKE  V +A+++   M+   +
Sbjct: 341 AGRLDDAIVLLDEMVRQ----GVPL--NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 189 NPNVVTYTSLIH-----------------------------------GFCHANDWNEAKG 213
             N + YT+LIH                                   G C+ +  +EAK 
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M + G++PN +    +M+   K+GK+  A  +L  ++    +PN  TY  L+DG C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I+     F  M  +G   +  +Y  L++G CKN  + EA+ L+NE+  KG+    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC---VRPQVRFTYARR 390
            Y  L  G  +      A  L  +M  + +  D   Y  FI G C   + P+ R  ++  
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 391 KGNSGNTNRG 400
            G+    +R 
Sbjct: 635 IGHGIAPDRA 644



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 192/371 (51%), Gaps = 10/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L  LA+++    V  LF++L +    P+++T++I+I+  CK G+++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+      P+VVTF SLI G      + E   L  +++  GC+ +V+TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A   F  M       GV+   N VT+S  +D  CKEG V +A +LF QM+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  N  TYT LI G C A   ++A  LL EMV QGV  NVV+  V+++ LCK  K+  A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M +  VR N   Y TL+ G  +     +   L   M++ G + D   Y  LI G 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +++EA SL  ++   G++P  + Y T+    F+  +   A+ +  ++  +    + 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 368 CTYRTFIDGLC 378
            TY   IDGLC
Sbjct: 504 ITYCALIDGLC 514



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 173/364 (47%), Gaps = 6/364 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F+  +    K       + LF ++   G+  + +TY+ LI+  CK G++    V+  
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R     NVVT+T L+ GLC E ++ EA  +   ++  G   N + Y TLI+G     
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           ++  AL L  EM N   E+ +        Y  +I GLC    +D+AK L  +M    L P
Sbjct: 413 NSEKALGLLSEMKNKGLELDISL------YGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N + YT+++     +    EA  +L +++D G QPNV++   +++ LCK G +D A    
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M    + PN   Y  L+DG C  G +N   +LF  M   G   D   Y  L++GY K 
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + +A +L  ++   G++  +  Y     G   +     A ++F EM G+ +A D   Y
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVY 646

Query: 371 RTFI 374
              I
Sbjct: 647 NCLI 650



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 17/305 (5%)

Query: 74  RSCFAPNVVTFTSLI--KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           RS  A  V T  S++  +GL  ++  V A A   +L+     PN  T N ++  L R   
Sbjct: 118 RSALASVVDTLLSVLADRGLLDDA--VRAVARVRELRV---PPNTRTCNHILLRLARDRS 172

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
             +   LF+++            PN  T++I+ID LCKEG + +A+ LF +MK     P+
Sbjct: 173 GRLVRRLFEQLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVT+ SLI G+    + +E + L+ EM   G + +VV+ N ++N  CK G+M+ A     
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  V  N  T++T +D FC  G +    +LF  M   G   ++F+Y  LI+G CK  
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +++A+ L +E+  +G+   VVTY  L  GL + R+   A  +   M+   V A+   Y 
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 372 TFIDG 376
           T I G
Sbjct: 403 TLIHG 407



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 159/318 (50%), Gaps = 10/318 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC--FCKMGQVSLG 65
           P  V ++ +L+  L K +       + + +   G+  +   Y+ LI+     K  + +LG
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +       ++  + +LI+GLC   ++ EA +L TK+   G EPN I Y T+++ 
Sbjct: 420 --LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             ++G    A+ + +++ +        F+PN +TY  +IDGLCK G +D+A   F +M+ 
Sbjct: 478 CFKSGKVPEAIAMLQKILDSG------FQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L+PNV  YT+L+ G C     NEA  L  EMV +G+  + V    +++   K G + +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M+   ++ + F Y   + GFC    +   +E+F  M   G   D   YN LI+
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651

Query: 306 GYCKNKEVEEALSLYNEL 323
            Y K   +EEA+SL +E+
Sbjct: 652 KYQKLGNLEEAISLQDEM 669



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 4/229 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PNT T + I+  L ++      + LF Q+      PNV T+  +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G  P+VV+ N +++   K G++D   +L++ M +   + +  TYN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G++      F +M+  G   +  +++  ++ +CK   V EA+ L+ ++  +G+     T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y  L  G  +  + + A+ L  EM    V  +  TY   +DGLC   +V
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V PN  + N I+  L +    D + RL+  + +    PN FT+N ++D  C  G++   +
Sbjct: 153 VPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF  M+ MGC  D  ++N LI+GY K  E++E   L  E+   G K  VVTYN L +  
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
            +  + E A   F  M+   V A+  T+ TF+D  C    VR     F   R +G + N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 198/430 (46%), Gaps = 44/430 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D V  L + +   G   D+ TY+ LINCFCK G++   +  
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R     NVVTF++ +   C E  + EA  LF +++  G   N  TY  LI+G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  EM       GV    N VTY++++DGLCKE  V +A+++   M+   +
Sbjct: 341 AGRLDDAIVLLDEMVRQ----GVPL--NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 189 NPNVVTYTSLIH-----------------------------------GFCHANDWNEAKG 213
             N + YT+LIH                                   G C+ +  +EAK 
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M + G++PN +    +M+   K+GK+  A  +L  ++    +PN  TY  L+DG C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I+     F  M  +G   +  +Y  L++G CKN  + EA+ L+NE+  KG+    V
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC---VRPQVRFTYARR 390
            Y  L  G  +      A  L  +M  + +  D   Y  FI G C   + P+ R  ++  
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 391 KGNSGNTNRG 400
            G+    +R 
Sbjct: 635 IGHGIAPDRA 644



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 192/371 (51%), Gaps = 10/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L  LA+++    V  LF++L +    P+++T++I+I+  CK G+++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+      P+VVTF SLI G      + E   L  +++  GC+ +V+TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A   F  M       GV+   N VT+S  +D  CKEG V +A +LF QM+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  N  TYT LI G C A   ++A  LL EMV QGV  NVV+  V+++ LCK  K+  A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M +  VR N   Y TL+ G  +     +   L   M++ G + D   Y  LI G 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +++EA SL  ++   G++P  + Y T+    F+  +   A+ +  ++  +    + 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 368 CTYRTFIDGLC 378
            TY   IDGLC
Sbjct: 504 ITYCALIDGLC 514



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 173/364 (47%), Gaps = 6/364 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +F+  +    K       + LF ++   G+  + +TY+ LI+  CK G++    V+  
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R     NVVT+T L+ GLC E ++ EA  +   ++  G   N + Y TLI+G     
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           ++  AL L  EM N   E+ +        Y  +I GLC    +D+AK L  +M    L P
Sbjct: 413 NSEKALGLLSEMKNKGLELDISL------YGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N + YT+++     +    EA  +L +++D G QPNV++   +++ LCK G +D A    
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M    + PN   Y  L+DG C  G +N   +LF  M   G   D   Y  L++GY K 
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + +A +L  ++   G++  +  Y     G   +     A ++F EM G+ +A D   Y
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVY 646

Query: 371 RTFI 374
              I
Sbjct: 647 NCLI 650



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 17/305 (5%)

Query: 74  RSCFAPNVVTFTSLI--KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           RS  A  V T  S++  +GL  ++  V A A   +L+     PN  T N ++  L R   
Sbjct: 118 RSALASVVDTLLSVLADRGLLDDA--VRAVARVRELRV---PPNTRTCNHILLRLARDRS 172

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
             +   LF+++            PN  T++I+ID LCKEG + +A+ LF +MK     P+
Sbjct: 173 GRLVRRLFEQLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVT+ SLI G+    + +E + L+ EM   G + +VV+ N ++N  CK G+M+ A     
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  V  N  T++T +D FC  G +    +LF  M   G   ++F+Y  LI+G CK  
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +++A+ L +E+  +G+   VVTY  L  GL + R+   A  +   M+   V A+   Y 
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 372 TFIDG 376
           T I G
Sbjct: 403 TLIHG 407



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 166/336 (49%), Gaps = 12/336 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC--FCKMGQVSLG 65
           P  V ++ +L+  L K +       + + +   G+  +   Y+ LI+     K  + +LG
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +       ++  + +LI+GLC   ++ EA +L TK+   G EPN I Y T+++ 
Sbjct: 420 --LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             ++G    A+ + +++ +        F+PN +TY  +IDGLCK G +D+A   F +M+ 
Sbjct: 478 CFKSGKVPEAIAMLQKILDSG------FQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L+PNV  YT+L+ G C     NEA  L  EMV +G+  + V    +++   K G + +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M+   ++ + F Y   + GFC    +   +E+F  M   G   D   YN LI+
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            Y K   +EEA+SL +E+  + + P+    +T   G
Sbjct: 652 KYQKLGNLEEAISLQDEM--ERVLPSCTDSDTATDG 685



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 4/229 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PNT T + I+  L ++      + LF Q+      PNV T+  +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G  P+VV+ N +++   K G++D   +L++ M +   + +  TYN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G++      F +M+  G   +  +++  ++ +CK   V EA+ L+ ++  +G+     T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y  L  G  +  + + A+ L  EM    V  +  TY   +DGLC   +V
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V PN  + N I+  L +    D + RL+  + +    PN FT+N ++D  C  G++   +
Sbjct: 153 VPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF  M+ MGC  D  ++N LI+GY K  E++E   L  E+   G K  VVTYN L +  
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
            +  + E A   F  M+   V A+  T+ TF+D  C    VR     F   R +G + N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 189/381 (49%), Gaps = 37/381 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFV 67
           + SFN  L  +A++     V SLF R+   G   + PDL TYSILI C C+ G++ LGF 
Sbjct: 58  IYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFA 116

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGL 126
             G +++  F    +TF  L+KGLCA+ R  +A  +   ++    C P+V +   L+ GL
Sbjct: 117 ALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 176

Query: 127 CRTGHTIVALNLFKEMTNGNGE------------IGVVFK-------------------- 154
           C    +  AL L   M +  G             I   FK                    
Sbjct: 177 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRIS 236

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN VTYS II  LCK   +DKA E+   M    + P+ +TY S++HG+C +    EA G 
Sbjct: 237 PNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 296

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +M   GV+PNVV+   +MN LCKNG+   A ++ D M +  + P+  TY TL+ G+  
Sbjct: 297 LKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 356

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +  +  L   M   G + D   +NILI  Y K ++V++A+ +++++   G+ P VV 
Sbjct: 357 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416

Query: 335 YNTLFHGLFEIRQAERALKLF 355
           Y T+   L +    + A+  F
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYF 437



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 15/296 (5%)

Query: 93  AESRIVEAAALFTKLKAFGCE---PNVITYNTLINGLCRTGHTIVALNL-FKEMTNGNGE 148
           A      A +LF ++   G +   P++ TY+ LI   CR G     L+L F  + N    
Sbjct: 69  ARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGR----LDLGFAALGN---V 121

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHAND 207
           I   F+   +T++ ++ GLC +     A ++ L+   E +  P+V + T L+ G C  N 
Sbjct: 122 IKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENR 181

Query: 208 WNEAKGLLIEMVDQ---GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             EA  LL  M D    G  P+VVS   ++N   K G  D A      M+   + PN  T
Sbjct: 182 SQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVT 241

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y++++   C    +++  E+  +M   G   D  +YN +++GYC + + +EA+    ++ 
Sbjct: 242 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 301

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             G++P VVTY +L + L +  +   A K+F  M    +  D  TYRT + G   +
Sbjct: 302 SDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 357



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 6/240 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP V S+  ++    K    D   S +  +    + P++ TYS +I   CK   +    
Sbjct: 200 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAM 259

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++++   P+ +T+ S++ G C+  +  EA     K+++ G EPNV+TY +L+N L
Sbjct: 260 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYL 319

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  +F  MT          +P+  TY  ++ G   +G + +   L   M   
Sbjct: 320 CKNGRCTEARKIFDSMTKRG------LEPDIATYRTLLQGYATKGALVEMHALLDLMVRN 373

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+   +  LI  +      ++A  +  +M   G+ PNVV    +++ LCK+G +D+A
Sbjct: 374 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 433



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L KN        +F  +   GL PD+ TY  L+  +   G +     +
Sbjct: 307 PNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 366

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R+   P+   F  LI     + ++ +A  +F+K++  G  PNV+ Y T+I+ LC+
Sbjct: 367 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 426

Query: 129 TGHTIVALNLFK 140
           +G    A+  F+
Sbjct: 427 SGSVDDAMLYFE 438


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 186/361 (51%), Gaps = 10/361 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L +    +    LF+ + S+G+ PD+YTY+ILI+ FCK+G +      
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSW 512

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P+VVT+T+L+       ++ +A+ +F ++   GC PN ITY+ L++GLC+
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF----------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G +  A  ++ +M   +  +G  F           PN VTY  +IDGLCK   V  A+E
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC     + A+ +   M   G  P V +   +++ + 
Sbjct: 633 LLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMF 692

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+ ++D A ++L  M++    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 693 KDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K+ +V+ +L L+ ++  +G  P  VTY  L +        + A  L  EM
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812

Query: 359 Q 359
           +
Sbjct: 813 K 813



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    + K +   G  PD  TYS +I   C+  +V   F++F  +      P
Sbjct: 429 CLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIP 488

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A + F ++++ GC P+V+TY  L++   +T     A ++F
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M +          PNT+TYS ++DGLCK G   KA E++ +M                
Sbjct: 549 HRMVDAG------CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             +++ PNVVTY +LI G C A+   +A+ LL  M   G +PN +  + +++  CK GK+
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKL 662

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           DNA  +   M +C   P   TY +L+D      +++   ++   M    C  +  +Y  +
Sbjct: 663 DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM 722

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G C+  E ++AL L + +  +G  P VVTY +L  GL +  + + +L+LF +M     
Sbjct: 723 IDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 364 AADTCTYRTFIDGLCV 379
           A +  TYR  I+  C 
Sbjct: 783 APNYVTYRVLINHCCA 798



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 184/432 (42%), Gaps = 83/432 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  LL    K K       +F R+   G  P+  TYS L++  CK G+      +
Sbjct: 523 PSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV 582

Query: 69  FGRILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           + +++ +                  APNVVT+ +LI GLC   ++V+A  L   + + GC
Sbjct: 583 YAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGC 642

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFK--------- 154
           EPN I Y+ LI+G C+ G    A  +F  M+              I  +FK         
Sbjct: 643 EPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIK 702

Query: 155 -----------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                      PN VTY+ +IDGLC+ G   KA +L   M+    NPNVVTYTSLI G  
Sbjct: 703 VLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLG 762

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------- 255
            +   + +  L  +M+ QG  PN V+  V++N  C  G +D A  LL  M Q        
Sbjct: 763 KSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQ 822

Query: 256 --CDVRPN-----------------------AFTYNTLMDGFCLTGKINRVKELFVSM-- 288
             C V                          A  Y  L+D F   G++ +  EL   M  
Sbjct: 823 GYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMME 882

Query: 289 --ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
              S+     D +Y  LI   C   ++E+A  LY+E+  KG+ P +  +  L  GL ++ 
Sbjct: 883 VSSSLNITSKD-TYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVN 941

Query: 347 QAERALKLFVEM 358
           +   AL+L   M
Sbjct: 942 KWNEALQLCYSM 953



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 178/427 (41%), Gaps = 53/427 (12%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N+++    ++  +   L    RL   G  P   TY+ L+      GQ+ +GF +   + 
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
              F  +  T     + LC E R  +A  +  + + F  +  + T   +I+GL       
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMIER-EDFKLDTVLCT--QMISGLMEASLFD 291

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A++    M   N  I     PN VTY  ++ G  K+  +   K +   M  E  NPN  
Sbjct: 292 EAISFLHRM-RCNSCI-----PNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPS 345

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN------------- 240
            + SL+H +C+A D+  A  LL  M   G  P  V  N+ +  +C               
Sbjct: 346 LFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAE 405

Query: 241 ----------------------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                                       GK D A +++ LM++    P+  TY+ ++   
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFL 465

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ +   LF  M+S+G   D ++Y ILI+ +CK   +E+A S ++E+   G  P+V
Sbjct: 466 CEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YAR 389
           VTY  L H   + +Q  +A  +F  M     A +T TY   +DGLC   + +     YA+
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 390 RKGNSGN 396
             G S N
Sbjct: 586 MIGTSDN 592



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 5/215 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K+   D  L LF ++ + G  P+  TY +LIN  C  G +     +
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSL 808

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++ +   V  + S+++G     + + +  L  +L++ G       Y  LI+   +
Sbjct: 809 LSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L KEM   +  + +  K    TY+ +I  LC    ++KA EL+ ++  + +
Sbjct: 867 AGRLEKALELHKEMMEVSSSLNITSKD---TYTSLIQALCLASQLEKAFELYSEITRKGV 923

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            P +  +  LI G    N WNEA  L   M D+GV
Sbjct: 924 VPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 6/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  +N L+    +    D    +   +   G+ P++ TY+  I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  ++R+    +VVT ++L+ GLC + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K+       +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN VTYT LI   C A++ +EA+ +L+EM ++ + PNVV+ + ++N   K G +D A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
               +M +  + PN  TY TL+DGF      +   E++  M   G K + F  + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +N ++EEA++L+ +    G+    V Y TL  GLF+      A K   E+   ++  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 368 CTYRTFIDGLCV 379
             Y  FI+ LC+
Sbjct: 555 VVYNVFINCLCM 566



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 178/395 (45%), Gaps = 41/395 (10%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L +N   +  ++LFK  +  GL  D   Y+ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ V +   I  LC   +  EA +  T+++  G +P+  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-- 194
            L  EM   +       KPN +TY+ ++ GL   G V+KAK L  +M     +P+ +T  
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 195 ---------------------------------YTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                                            Y +L+   C+     +A  +L EM+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P+ ++ N ++   CK+  +DNA      M+  ++ PN  T+NTL+ G    G+I   
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             + + ME  G + ++ +Y+IL  G+ K     EA+ LY E+  KG  P V TYN L   
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +     +A +LF +MQ   V   +CTY   + G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 182/401 (45%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + + L+  L ++  +    +LF+ ++ +G  P+  TY  LI+   K G+      + G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++      ++VT+T+L+  L  + +  E         +    PN +TY  LI+ LC+  
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  +  EM   +        PN VT+S +I+G  K G +DKA E    MK   +NP
Sbjct: 394 NVDEAEQVLLEMEEKS------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
           NVVTY +LI GF      + A  +  +M+ +GV+ N    + ++N L +NGK++ A    
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 247 ---------------SRLLDLMVQCDVRPNAF----------------TYNTLMDGFCLT 275
                          + L+D + +    P AF                 YN  ++  C+ 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK    K     M +MG K D  +YN +I  +C+  E  +AL L +E+    IKP ++TY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  GLF     E+A  L  EM     +  + T+R  +  
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 180/384 (46%), Gaps = 7/384 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N LL  L +N   D   +L  R   I    D+  ++ LI  +C++G       +  R+
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM 195

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  +VV + +L+ G C   ++  A  +   +K  G +PNV TY   I   CRT   
Sbjct: 196 TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L++ M       GV+   + VT S ++ GLC++G   +A  LF +M      PN 
Sbjct: 256 EEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI     A    E   LL EMV +GV  ++V+   +M+ L K GK D     L  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            +  ++ PN  TY  L+D  C    ++  +++ + ME      +  +++ +ING+ K   
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A      +  +GI P VVTY TL  G F+ +  + AL+++ +M    V  +     +
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 373 FIDGLCVRPQVRFTYARRKGNSGN 396
            ++GL    ++    A  K  SG+
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGS 513



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 29/405 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L K    D V    +   S  L P+  TY++LI+  CK   V     +   +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNVVTF+S+I G      + +A      +K  G  PNV+TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 133 IVALNLFKEM---------------TNG---NGEI-----------GVVFKPNTVTYSII 163
             AL ++ +M                NG   NG+I           G     + V Y+ +
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGL K G +  A +   ++   N+ P+ V Y   I+  C    + EAK  L EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P+  + N ++   C+ G+   A +LL  M    ++PN  TYNTL+ G   TG + + K 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M S G      ++  ++    +++ ++  L ++  +   G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +A  +  EM G+ +A DT T+   I G C    +   +A
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 168/383 (43%), Gaps = 44/383 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ + CL     +    S    + ++GL PD  TY+ +I   C+ G+ +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT---------- 118
              +  S   PN++T+ +L+ GL     + +A  L  ++ + G  P+ +T          
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 119 -------------------------YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                    YNTL+  LC  G T  A  + +EM      +G   
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGI 725

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+T+T++ +I G CK   +D A   + QM ++N++PN+ T+ +L+ G        EA  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +LIEM   G++PN ++ +++     K      A RL   MV     P   TYN L+  F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G + + KELF  M+  G      +Y+IL++G+ + +   E      ++  KG  P+  
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 334 TYNTLFHGLFE---IRQAERALK 353
           T + +     +     QA+R LK
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 16/314 (5%)

Query: 71  RILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           R+LR   A      P  V +  L+  L   S    A A+  ++   G   + +T NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLCR G    A  L      G G    +   + + ++ +I G C+ G    A  +  +M 
Sbjct: 144 GLCRNGQVDAAAALADR---GGG----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L  +VV Y +L+ GFC A   + A+G+L  M + GV PNV +    +   C+   ++
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + MV+  V  +  T + L+ G C  G+ +    LF  M+ +G   +  +Y  LI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K    +E LSL  E+  +G+   +VTY  L   L +  + +           ++++
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 365 ADTCTYRTFIDGLC 378
            +  TY   ID LC
Sbjct: 377 PNGVTYTVLIDALC 390



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 6/320 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P + ++N L+  L      +    L   + S G  P   T+  ++    +  ++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I   ++ +    ++  + +L++ LC      +A  +  ++   G  P+ IT+N LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C++ H   A   + +M + N        PN  T++ ++ GL   G + +A  + ++M
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQN------ISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           +   L PN +TY  L  G    ++  EA  L  EMV +G  P V + N ++++  K G M
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  L   M +  V P + TY+ L+ G+        VK+    M+  G      + + +
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910

Query: 304 INGYCKNKEVEEALSLYNEL 323
              + K     +A  L   L
Sbjct: 911 CRAFSKPGMTWQAQRLLKNL 930


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 6/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  +N L+    +    D    +   +   G+ P++ TY+  I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  ++R+    +VVT ++L+ GLC + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K+       +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN VTYT LI   C A++ +EA+ +L+EM ++ + PNVV+ + ++N   K G +D A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
               +M +  + PN  TY TL+DGF      +   E++  M   G K + F  + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +N ++EEA++L+ +    G+    V Y TL  GLF+      A K   E+   ++  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 368 CTYRTFIDGLCV 379
             Y  FI+ LC+
Sbjct: 555 VVYNVFINCLCM 566



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 178/395 (45%), Gaps = 41/395 (10%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L +N   +  ++LFK  +  GL  D   Y+ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ V +   I  LC   +  EA +  T+++  G +P+  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-- 194
            L  EM   +       KPN +TY+ ++ GL   G V+KAK L  +M     +P+ +T  
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 195 ---------------------------------YTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                                            Y +L+   C+     +A  +L EM+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P+ ++ N ++   CK+  +DNA      M+  ++ PN  T+NTL+ G    G+I   
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             + + ME  G + ++ +Y+IL  G+ K     EA+ LY E+  KG  P V TYN L   
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +     +A +LF +MQ   V   +CTY   + G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 182/401 (45%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + + L+  L ++  +    +LF+ ++ +G  P+  TY  LI+   K G+      + G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++      ++VT+T+L+  L  + +  E         +    PN +TY  LI+ LC+  
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  +  EM   +        PN VT+S +I+G  K G +DKA E    MK   +NP
Sbjct: 394 NVDEAEQVLLEMEEKS------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
           NVVTY +LI GF      + A  +  +M+ +GV+ N    + ++N L +NGK++ A    
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 247 ---------------SRLLDLMVQCDVRPNAF----------------TYNTLMDGFCLT 275
                          + L+D + +    P AF                 YN  ++  C+ 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK    K     M +MG K D  +YN +I  +C+  E  +AL L +E+    IKP ++TY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  GLF     E+A  L  EM     +  + T+R  +  
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 180/384 (46%), Gaps = 7/384 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N LL  L +N   D   +L  R   I    D+  ++ LI  +C++G       +  R+
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM 195

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  +VV + +L+ G C   ++  A  +   +K  G +PNV TY   I   CRT   
Sbjct: 196 TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L++ M       GV+   + VT S ++ GLC++G   +A  LF +M      PN 
Sbjct: 256 EEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI     A    E   LL EMV +GV  ++V+   +M+ L K GK D     L  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            +  ++ PN  TY  L+D  C    ++  +++ + ME      +  +++ +ING+ K   
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A      +  +GI P VVTY TL  G F+ +  + AL+++ +M    V  +     +
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 373 FIDGLCVRPQVRFTYARRKGNSGN 396
            ++GL    ++    A  K  SG+
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGS 513



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 29/405 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L K    D V    +   S  L P+  TY++LI+  CK   V     +   +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNVVTF+S+I G      + +A      +K  G  PNV+TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 133 IVALNLFKEM---------------TNG---NGEI-----------GVVFKPNTVTYSII 163
             AL ++ +M                NG   NG+I           G     + V Y+ +
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGL K G +  A +   ++   N+ P+ V Y   I+  C    + EAK  L EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P+  + N ++   C+ G+   A +LL  M    ++PN  TYNTL+ G   TG + + K 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M S G      ++  ++    +++ ++  L ++  +   G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +A  +  EM G+ +A DT T+   I G C    +   +A
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 149/334 (44%), Gaps = 41/334 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ + CL     +    S    + ++GL PD  TY+ +I   C+ G+ +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT---------- 118
              +  S   PN++T+ +L+ GL     + +A  L  ++ + G  P+ +T          
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 119 -------------------------YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                    YNTL+  LC  G T  A  + +EM      +G   
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGI 725

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+T+T++ +I G CK   +D A   + QM ++N++PN+ T+ +L+ G        EA  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +LIEM   G++PN ++ +++     K      A RL   MV     P   TYN L+  F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             G + + KELF  M+  G      +Y+IL++G+
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 16/314 (5%)

Query: 71  RILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           R+LR   A      P  V +  L+  L   S    A A+  ++   G   + +T NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLCR G    A  L      G G    +   + + ++ +I G C+ G    A  +  +M 
Sbjct: 144 GLCRNGQVDAAAALADR---GGG----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L  +VV Y +L+ GFC A   + A+G+L  M + GV PNV +    +   C+   ++
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + MV+  V  +  T + L+ G C  G+ +    LF  M+ +G   +  +Y  LI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K    +E LSL  E+  +G+   +VTY  L   L +  + +           ++++
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 365 ADTCTYRTFIDGLC 378
            +  TY   ID LC
Sbjct: 377 PNGVTYTVLIDALC 390


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 206/399 (51%), Gaps = 27/399 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N  L  LAK          F+++   G  PD +TYSI++   CK G++     + G
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-FGCEPNVITYNTLINGLCRT 129
           ++  S    NV+T++ +I G C  SR+ +A  +F  + A  GC P+V+T+N+L+ GLC  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSG 157

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A  LF+ M     E      PN ++YS ++DGLCK G +D+A  L+ +M  ++  
Sbjct: 158 ERMSEAFVLFEYMAKAGCE------PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV-----------------SSNV 232
           P++V YTS + G C AN   EA     +MV +G + + V                 + N 
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQ 271

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++  LC++G +D A +  + M+  +  P+A  +NTL+   C + ++     LF  M+SM 
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 293 ---CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              C  +  +YNI+++  CK K+++EA  L NE+   G+ P VVTY+ L  GL ++ + +
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           RA  L  EM    V  D+ T  + ++ L    +V +  +
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS 430



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 199/419 (47%), Gaps = 52/419 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN LL  L   +       LF+ +   G  P++ +YS L++  CK G++     +
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     P++V +TS + GLC  +R+ EA     K+   G + + + ++T+I  LC+
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 129 TGHTIVALN-----------------LFKEMTNGN----GEI----------------GV 151
            GH   A N                  F+EM + N     E+                GV
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 152 VF------------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +              PN  TY+I++D LCK   +D+A+EL  +M    L+P+VVTY++L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G C     + A  LL EM  +GV P+  +   I+N L K GK+D A   L+ M      
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  TYNTL+DG C  G+I+        M +  C  D FSY I+I   C++ +   A ++
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E+  +G+ P  V Y++L  GL      + AL+L   ++ +    D   ++  +DGLC
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLC 557



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 197/432 (45%), Gaps = 52/432 (12%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +++I+L  L K    D    L  +L   G+  ++ TYS++I+  CK  +V     
Sbjct: 70  PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 68  IFGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           IF  +     C  P+VVTF SL+KGLC+  R+ EA  LF  +   GCEPNVI+Y+TL++G
Sbjct: 130 IFKTMSAGGGCV-PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPN 156
           LC+ G    A  L++EM   +    +V                              K +
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 157 TVTYSIII-----------------DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            V +S +I                 + LC+ G +D+A + F +M   N  P+   + +LI
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 200 HGFCHANDWNEAKGLLIEMVDQG---VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           H  C +    +   L   M         PN+ + N++++ LCK  ++D A  L++ M   
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + P+  TY+ L+DG C  GK++R  +L   M   G   D F+   ++N   K  +V+ A
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           LS    +  +G  P +VTYNTL  GL +  + + A+    +M       D  +Y   I  
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488

Query: 377 LCVRPQVRFTYA 388
           LC   Q    +A
Sbjct: 489 LCRSGQAAGAHA 500



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 173/343 (50%), Gaps = 12/343 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-- 72
           N ++  L ++   D     F+ + S    P    ++ LI+  CK  ++  G ++F R+  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 73  LRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++  + P N+ T+  ++  LC   ++ EA  L  ++  +G  P+V+TY+ L++GLC+ G 
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A +L +EM+        VF P++ T + I++ L K G VD A      MK     P+
Sbjct: 390 LDRACDLLEEMSKEG-----VF-PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           +VTY +L+ G C A   +EA   L +MV     P+V S  +I+  LC++G+   A  +  
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            MV+  V P+   Y++L+DG    G  +   EL   +++  CK D   + ++++G CK  
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAG 560

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           + E+A  +   +   G      TY  +  GL ++ + ++A +L
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 12/318 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSL 64
           PP    FN L+  + K+K     + LF+R+ S+  F   P+L TY+I+++  CK  Q+  
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +     +P+VVT+++L+ GLC   ++  A  L  ++   G  P+  T  +++N
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L + G    AL+  + M    G       P+ VTY+ ++DGLCK G +D+A     +M 
Sbjct: 418 ALSKAGKVDYALSHLETM-KARGST-----PDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+V +YT +I   C +     A  +  EMV +GV P+ V  + +++ L +NG  D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A   L+L+     +P+   +  ++DG C  GK     E+   M   G   D F+Y  ++
Sbjct: 532 LA---LELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588

Query: 305 NGYCKNKEVEEALSLYNE 322
            G  K  +V++A  L ++
Sbjct: 589 RGLRKLGKVDKARQLVDD 606



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 9/173 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + ++N LL  L K    D  ++   ++ +    PD+++Y+I+I   C+ GQ +   
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF  +++    P+ V + SL+ GL      +E  AL   LK   C+P+ + +  +++GL
Sbjct: 500 AIFQEMVKRGVLPDTVLYHSLLDGLARNG--LEDLAL-ELLKTSLCKPDFVMHKMVVDGL 556

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           C+ G    A  + + M +        F  +  TY  ++ GL K G VDKA++L
Sbjct: 557 CKAGKAEDACEVVERMADAG------FPADAFTYINVVRGLRKLGKVDKARQL 603



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           GKI+ +  LF  +    G +H  F+YN  ++   K    + A   + ++  +G  P   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y+ +  GL +  + ++A +L  +++ + V  +  TY   IDG C   +V
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 184/345 (53%), Gaps = 9/345 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSLIKGLCAESRIVE 99
           GL PD +TY+ LI  +C+   +   F +F  + L+ C   N V +T LI GLC E RI E
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGC-RRNEVAYTHLIHGLCVERRIDE 306

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  LF K+K   C P V TY  LI  LC +     ALNL KEM     E G+  KPN  T
Sbjct: 307 AMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME----EKGI--KPNIHT 360

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++ID LC +  ++KA+EL  QM  + L PNV+TY +LI+G+C      +A  ++  M 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            + ++PN  + N ++   CK   +  A  +L+ M++  V P+  TYN+L+DG C +G  +
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M   G   D ++Y  +I+  CK+K VEEA  L++ L  K + P VV Y  L 
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI 539

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            G  +  +   A  +  +M   +   ++ T+   I GLC   +++
Sbjct: 540 DGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLK 584



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L   +  D  + LF ++     +P + TY++LI   C   + S    +   +
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM 349

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN+ T+T LI  LC++ ++ +A  L  ++   G  PNVITYN LING C+ G  
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL++ + M + N       +PNT TY+ +I G CK   V KA  +  +M    + P+V
Sbjct: 410 EDALDVVELMESRN------LRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDV 462

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY SLI G C + +++ A  LL  M D+G+ P+  +   +++ LCK+ +++ A  L D 
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + Q DV PN   Y  L+DG+C  GK+N    +   M S  C  +  ++N LI+G C + +
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++EA  L  ++    ++PTV T   L H L +    + A + F +M  +    D  TY T
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642

Query: 373 FIDGLC 378
           FI   C
Sbjct: 643 FIQTYC 648



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 45/418 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L  ++     L+L K +   G+ P+++TY++LI+  C   ++     +
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA--------------ESR------------------ 96
            G++L     PNV+T+ +LI G C               ESR                  
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 97  --IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
             + +A  +  K+      P+V+TYN+LI+G CR+G+   A  L   M +     G+V  
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR----GLV-- 494

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+  TY+ +ID LCK   V++A +LF  ++ +++ PNVV YT+LI G+C A   NEA  +
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L +M+ +   PN ++ N +++ LC +GK+  A+ L + MV+ D++P   T   L+     
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLK 614

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G  +     F  M S G K D  +Y   I  YC+   +++A  +  ++   G+ P + T
Sbjct: 615 DGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFT 674

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           Y++L  G  ++ +   A  +   M          T+ + I  L     +   Y + KG
Sbjct: 675 YSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL-----LEMKYGKVKG 727



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 161/368 (43%), Gaps = 52/368 (14%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           +Y+Y+ L+      G V + F I   +++SC   + V  T  +  LC +    E+  L  
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVADTLFVLDLCRKMNKDESFELKY 179

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           KL   GC      YNTL+N L R G       ++ EM            PN  TY+ +++
Sbjct: 180 KL-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK------VCPNIYTYNKMVN 226

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW----------------- 208
           G CK G V++A +    +    L+P+  TYTSLI G+C   D                  
Sbjct: 227 GYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRR 286

Query: 209 ------------------NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
                             +EA  L ++M D    P V +  V++  LC + +   A  L+
Sbjct: 287 NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLV 346

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++PN  TY  L+D  C   K+ + +EL   M   G   +  +YN LINGYCK 
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+AL +   +  + ++P   TYN L  G  + R   +A+ +  +M    V  D  TY
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTY 465

Query: 371 RTFIDGLC 378
            + IDG C
Sbjct: 466 NSLIDGQC 473



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 186/451 (41%), Gaps = 83/451 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    ++ ++D+   L   +N  GL PD +TY+ +I+  CK  +V     +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PNVV +T+LI G C   ++ EA  +  K+ +  C PN +T+N LI+GLC 
Sbjct: 520 FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCT 579

Query: 129 TGHTIVALNLFKEMTN------------------GNGEIGVVF-----------KPNTVT 159
            G    A  L ++M                     +G+    +           KP+  T
Sbjct: 580 DGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHT 639

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF----------------- 202
           Y+  I   C+EG +  A+++  +MK   ++P++ TY+SLI G+                 
Sbjct: 640 YTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699

Query: 203 ---CHAND--------------WNEAKG-------------------LLIEMVDQGVQPN 226
              C  +               + + KG                   LL +MV+ GV PN
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPN 759

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELF 285
             S   +M  +C+ G +  A ++ D M Q + + P+   +N L+   C   K N   ++ 
Sbjct: 760 AKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVV 819

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M  +G      S  ILI    K  E E   S++  L   G     + +  +  G+ + 
Sbjct: 820 DDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQ 879

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              E   +LF  M+ N     + TY   I+G
Sbjct: 880 GLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I        T+  L+L ++M N +    + +K     Y+ +++ L + G VD+ K++++
Sbjct: 149 MIKSCDSVADTLFVLDLCRKM-NKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  + + PN+ TY  +++G+C   +  EA   +  +V+ G+ P+  +   ++   C+  
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D+A ++   M     R N   Y  L+ G C+  +I+   +LFV M+   C     +Y 
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYT 327

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           +LI   C ++   EAL+L  E+  KGIKP + TY  L   L    + E+A +L  +M   
Sbjct: 328 VLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK 387

Query: 362 DVAADTCTYRTFIDGLCVR 380
            +  +  TY   I+G C R
Sbjct: 388 GLMPNVITYNALINGYCKR 406


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 190/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L      D  L + + +   G+ P +YTY++ I   C +        +
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 367

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ +    PNV T+T+LI GL    ++  A  L+ K+   G  PN +TYN LIN LC 
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M  G+G +      NT TY+ II GLC  G ++KA  LF +M     
Sbjct: 428 GGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY +LI+G+    + N A  LL  M + G +P+  + N +++   K GK+++AS 
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+C + PN  +Y TL+DG    GK++    L   ME MGC  +  SYN +ING  
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  + +++  +G+ P V+TY TL  GL    + + A K+F +M+      +  
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 369 TYRTFIDGLC 378
           TY + I GLC
Sbjct: 662 TYSSLIYGLC 671



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L+K         +  ++    L PD++TY+ LI   C+   + L F +
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 297

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA---------------------------- 100
           F R+++    PN VT+++LI GLC E R+ EA                            
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 357

Query: 101 -------AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                    L  ++K  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V 
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV- 412

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PNTVTY+ +I+ LC  G    A ++F  M+      N  TY  +I G C   D  +A  
Sbjct: 413 -PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M+  G  P VV+ N ++N     G ++NA+RLLDLM +    P+ +TYN L+ GF 
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+      F  M   G   +  SY  LI+G+ K+ +V+ ALSL   +   G  P V 
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +YN + +GL +  +   A K+  +M    +  +  TY T IDGLC   + +F +
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N LL  LAK +  +   +L+K++ + G+ P L T++ LIN   K G+V    +I  +I
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 266

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +   +P+V T+TSLI G C    +  A  +F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL++ +EM     E G+  +P   TY++ I  LC     ++A EL  +MK     PNV
Sbjct: 327 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G         A GL  +M+ +G+ PN V+ N ++NELC  G+   A ++   
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M       N  TYN ++ G CL G I +   LF  M  MG      +YN LINGY     
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V  A  L + +   G +P   TYN L  G  +  + E A   F EM    +  +  +Y T
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 373 FIDG 376
            IDG
Sbjct: 561 LIDG 564



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 176/369 (47%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L++    +  + L+ ++   GL P+  TY+ LIN  C  G+ S    I
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N  T+  +IKGLC    I +A  LF K+   G  P V+TYNTLING   
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 497

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L   M     E      P+  TY+ ++ G  K G ++ A   F +M    L
Sbjct: 498 KGNVNNAARLLDLMKENGCE------PDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPN V+YT+LI G       + A  LL  M + G  PNV S N ++N L K  +   A +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M +  + PN  TY TL+DG C  G+     ++F  ME   C  + ++Y+ LI G C
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  + +EA  L  E+  KG+ P  VT+ +L  G   + + + A  L   M       +  
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731

Query: 369 TYRTFIDGL 377
           TY   + GL
Sbjct: 732 TYSVLLKGL 740



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 190/394 (48%), Gaps = 32/394 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   +K    ++    F+ +   GL P+  +Y+ LI+   K G+V +   +
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNV ++ ++I GL  E+R  EA  +  K+   G  PNVITY TLI+GLCR
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  +F +M            PN  TYS +I GLC+EG  D+A+ L  +M+ + L
Sbjct: 638 NGRTQFAFKIFHDMEKRKC------LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL---C------- 238
            P+ VT+TSLI GF      + A  LL  MVD G +PN  + +V++  L   C       
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 239 --------------KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
                         K+   +  S LL  M +    P   TY+TL+ G C  G+    ++L
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811

Query: 285 FVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              M+  G C   +  Y++LI  +CKN EV+ AL +++ +  KG +  +  Y  L   L 
Sbjct: 812 VKDMKERGFCPDREIYYSLLI-AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 870

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  Q E A  LF  M   +  AD   +   +DGL
Sbjct: 871 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 10  PVSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P     IL+    +N+     V      ++ +G    LY+ + L+    K   V     +
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++L S   P+++TF +LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +  +A  +F  M     +      PN+VTYS +I+GLC EG VD+A ++  +M  + +
Sbjct: 288 NRNLDLAFGVFDRMVKEGCD------PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TYT  I   C      EA  L+  M  +G +PNV +   +++ L + GK++ A  
Sbjct: 342 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 401

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  + PN  TYN L++  C+ G+ +   ++F  ME  G   +  +YN +I G C
Sbjct: 402 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 461

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++E+A+ L+ ++   G  PTVVTYNTL +G         A +L   M+ N    D  
Sbjct: 462 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 521

Query: 369 TYRTFIDG 376
           TY   + G
Sbjct: 522 TYNELVSG 529



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 30/404 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+       + +    L   +   G  PD +TY+ L++ F K G++      
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN V++T+LI G   + ++  A +L  +++  GC PNV +YN +INGL +
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  +M     E G++  PN +TY+ +IDGLC+ G    A ++F  M+    
Sbjct: 603 ENRFSEAEKICDKM----AEQGLL--PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY+SLI+G C     +EA+ LL EM  +G+ P+ V+   +++     G++D+A  
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF---CLTGK---------------------INRVKEL 284
           LL  MV    +PN  TY+ L+ G    CL  +                        V  L
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNL 776

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M  +GC+    +Y+ L++G C+     EA  L  ++  +G  P    Y +L     +
Sbjct: 777 LARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 836

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             + + ALK+F  ++          YR  I  LC   QV    A
Sbjct: 837 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 880



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 193/428 (45%), Gaps = 53/428 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     + T L +F  +   G   +  TY+ +I   C  G +    V+
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P VVT+ +LI G   +  +  AA L   +K  GCEP+  TYN L++G  +
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532

Query: 129 TGHTIVALNLFKEMT------------------NGNGEIGVVFK-----------PNTVT 159
            G    A   F+EM                   + +G++ +              PN  +
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I+GL KE    +A+++  +M  + L PNV+TYT+LI G C       A  +  +M 
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +   PN+ + + ++  LC+ GK D A  LL  M +  + P+  T+ +L+DGF + G+I+
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKN-KEVEEALSLYNELPFK------------ 326
               L   M  +GCK +  +Y++L+ G  K    +EE +++ +E  +             
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 327 -----------GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
                      G +PT+ TY+TL  GL    +   A +L  +M+      D   Y + + 
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 832

Query: 376 GLCVRPQV 383
             C   +V
Sbjct: 833 AHCKNLEV 840



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 166/328 (50%), Gaps = 16/328 (4%)

Query: 53  INCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +NCF  M           R++R   FAP       +IK    E  I   A    ++   G
Sbjct: 150 MNCFISM---------LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMG 200

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
              ++ + NTL+  L +      A NL+K+M N         +P+ +T++ +I+ L K+G
Sbjct: 201 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKG 254

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V +A+ +  Q+   +L+P+V TYTSLI G C   + + A G+   MV +G  PN V+ +
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++N LC  G++D A  +L+ M++  + P  +TY   +   C         EL   M+  
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC+ +  +Y  LI+G  +  ++E A+ LY+++  +G+ P  VTYN L + L    +   A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           LK+F  M+G+   A+T TY   I GLC+
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCL 462



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 30/319 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L +N        +F  +      P+LYTYS LI   C+ G+     ++
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 682

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL-- 126
              + R   AP+ VTFTSLI G     RI  A  L  ++   GC+PN  TY+ L+ GL  
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742

Query: 127 -CRTGHTIVAL---------------------NLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            C      VA+                     NL   M+    EIG   +P   TYS ++
Sbjct: 743 ECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS----EIGC--EPTLDTYSTLV 796

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            GLC++G   +A++L   MK     P+   Y SL+   C   + + A  +   +  +G Q
Sbjct: 797 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ 856

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
            ++     ++  LCK G+++ A  L D M++ +   +   +  L+DG    G+++   +L
Sbjct: 857 LHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 916

Query: 285 FVSMESMGCKHDDFSYNIL 303
              MES     +  +Y IL
Sbjct: 917 LHIMESKNFTPNIQTYVIL 935



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 52/125 (41%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  LL    KN   D  L +F  + + G    L  Y  LI   CK GQV     +
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L   +  + + +T L+ GL  E  +     L   +++    PN+ TY  L   L R
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 941

Query: 129 TGHTI 133
            G +I
Sbjct: 942 IGKSI 946


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 199/371 (53%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   +    +   + +FK ++S GL P +   +  I+  C+  ++     I
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN++++++L+ G  AE       +L   + + G  PN   +N LIN   R
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +F++M N     G++  P+TVT++ +I  LC+ G +D A   F  M    +
Sbjct: 345 CGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDNAS 247
            P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+N L K G++    
Sbjct: 399 PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGK 458

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++DLMVQ   RPN  T+N+LM+G+CL G +     L  +M S+G + + + Y  L++GY
Sbjct: 459 DIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 518

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN  +++AL+++ ++  KG+KPT V YN + HGLF+ R+   A K+F EM  +      
Sbjct: 519 CKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSI 578

Query: 368 CTYRTFIDGLC 378
            TY   + GLC
Sbjct: 579 QTYGVVLGGLC 589



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 30  VLSLFKRLN------SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
            + LFKR++      +    P +YTY+ILI+C+ +M +  L   +FGR+LR+   P+V +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + +LI G   E  + +A  LF K+      P+V+TYN+LI+GLC+T   + +  + ++M 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
           +         +PN  TY+ +I G    G   ++  +F +M    L P VV   S IH  C
Sbjct: 220 DAG------IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALC 273

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             N   EAK +   MV +G +PN++S + +++     G   N + L++LMV   + PN  
Sbjct: 274 RHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHR 333

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            +N L++ +   G +++   +F  M++ G   D  ++  +I+  C+   +++AL  +N +
Sbjct: 334 FFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 393

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
              G+ P+   Y  L  G     +  +A +L  EM   D+      Y + I
Sbjct: 394 VDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 444



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 193/412 (46%), Gaps = 42/412 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P + ++NIL+ C  +    +  L++F RL   GL PD+ +Y+ LI+ F K G+V
Sbjct: 114 HAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEV 173

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + +F +++    +P+VVT+ SLI GLC    +V++  +  ++   G  PN  TYN+L
Sbjct: 174 DKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSL 233

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I G    G    ++ +FKEM++     G++  P  V  +  I  LC+   + +AK++F  
Sbjct: 234 IYGYSTAGMWKESVRVFKEMSSS----GLI--PCVVNCNSFIHALCRHNRIKEAKDIFDS 287

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  +   PN+++Y++L+HG+     +     L+  MV +G+ PN    N+++N   + G 
Sbjct: 288 MVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGM 347

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           MD A  + + M    + P+  T+ T++   C  G+++     F  M  +G    +  Y  
Sbjct: 348 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRC 407

Query: 303 LINGYCKNKEVEEALSLYNEL-----PFKGIK---------------------------- 329
           LI G C + E+ +A  L +E+     P  G+K                            
Sbjct: 408 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT 467

Query: 330 ---PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              P VVT+N+L  G   +   E A  L   M    +  +   Y T +DG C
Sbjct: 468 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 519



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 5/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ LL   A    +  + SL   + S G+ P+   ++ILIN + + G +    +I
Sbjct: 295 PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VTF ++I  LC   R+ +A   F  +   G  P+   Y  LI G C 
Sbjct: 355 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  EM N +     +  P    +S II+ L KEG V + K++   M     
Sbjct: 415 HGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQ 469

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVT+ SL+ G+C   +  EA  LL  M   G++PN      +++  CKNG++D+A  
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 529

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+   V+P +  YN ++ G     +    K++F  M   G      +Y +++ G C
Sbjct: 530 VFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLC 589

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N   +EA  L  +L    +K  ++T+N +   + ++ + + A +LF  +    +     
Sbjct: 590 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVH 649

Query: 369 TYRTFIDGL 377
           TY   I  L
Sbjct: 650 TYNLMISNL 658



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 7/362 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  ++  L +    D  L  F  +  IG+ P    Y  LI   C  G++     +
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKEL 424

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              ++ +    P V  F+S+I  L  E R+ E   +   +   G  PNV+T+N+L+ G C
Sbjct: 425 ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC 484

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G+   A  L   M +    IG+  +PN   Y  ++DG CK G +D A  +F  M ++ 
Sbjct: 485 LVGNMEEAFALLDAMAS----IGI--EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 538

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P  V Y  ++HG   A     AK +  EM++ G   ++ +  V++  LC+N   D A+
Sbjct: 539 VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEAN 598

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ +   +V+ +  T+N ++      G+    KELF ++ + G      +YN++I+  
Sbjct: 599 MLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNL 658

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K +  EEA +L+  +   G  P     N +   L +  +  +A      +  N++  + 
Sbjct: 659 IKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEA 718

Query: 368 CT 369
            T
Sbjct: 719 ST 720



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 10/271 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 471 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V +  ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 529 TVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 589 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P V TY  +I        + EA  L I +   G  P+    N I+  L K  ++  A
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 702

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           S  L ++ + ++   A T + L   F   GK
Sbjct: 703 SNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 84/160 (52%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P + + N++++   +  + + A  +   +++  + P+  +YNTL+DGF   G++++  EL
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M       D  +YN LI+G CK KE+ ++  +  ++   GI+P   TYN+L +G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               + ++++F EM  + +        +FI  LC   +++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 27/58 (46%)

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           PT+ TYN L      + + E AL +F  +    +  D C+Y T IDG     +V   Y
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAY 177


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 186/375 (49%), Gaps = 7/375 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  V + N +L    +   +     +F  +   G+ PD  ++  L+   C+ G+V  
Sbjct: 132 HGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEE 191

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   + R  F+ +  T T +++ LC + R  + +  F ++   G  PNV+ Y   I+
Sbjct: 192 VDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWID 251

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM- 183
           GLC+  +   A ++ +EM      +G   KPN  T++ +IDGLCK G+ ++A  LFL++ 
Sbjct: 252 GLCKRRYVKQAFHVLEEM------VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 305

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K  +  PNV TYT +I G+C       A+ LL+ MV+QG++PN  +   ++   CK G  
Sbjct: 306 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 365

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A  L++ M Q    PN +TYN ++DGFC  GKI    ++     S G K D  +Y IL
Sbjct: 366 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 425

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I  +CK   +  AL L++ +   G  P +  Y +L     + RQ E + K F +     +
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485

Query: 364 AADTCTYRTFIDGLC 378
                TY + I G C
Sbjct: 486 LPTKQTYTSMIAGYC 500



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 185/359 (51%), Gaps = 5/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF  L+    +    + V +L   +   G   D  T ++++   C+ G+       
Sbjct: 171 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 230

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L     PNVV +T+ I GLC    + +A  +  ++   G +PNV T+ TLI+GLC+
Sbjct: 231 FRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 290

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  LF ++   +      +KPN  TY+++I G C+EG + +A+ L ++M  + L
Sbjct: 291 IGWTERAFRLFLKLIKSSS-----YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 345

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+LI G C    ++ A  L+ +M  +G  PN+ + N +++  CK GK+  A +
Sbjct: 346 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 405

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +     ++ +  TY  L+   C  G I    +LF  M   GC  D  +Y  LI+ YC
Sbjct: 406 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYC 465

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           + +++EE+   +++    G+ PT  TY ++  G  ++ ++  AL++F  M  N   AD+
Sbjct: 466 QQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADS 524



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 132/292 (45%), Gaps = 9/292 (3%)

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           V A  +F  +   G  P+  ++  L+   CR G       L   M          F  + 
Sbjct: 155 VYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYG------FSLDN 208

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            T ++++  LC++G      E F +M      PNVV YT+ I G C      +A  +L E
Sbjct: 209 ATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEE 268

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           MV +G++PNV +   +++ LCK G  + A RL L L+     +PN  TY  ++ G+C  G
Sbjct: 269 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 328

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K+ R + L V M   G K +  +Y  LI G+CK    + A  L N++  +G  P + TYN
Sbjct: 329 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 388

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            +  G  +  + + A K+        +  D  TY   I   C   Q   TYA
Sbjct: 389 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC--KQGHITYA 438



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++    + G + +A ++ L+M+   L   V T   ++        +  A+ +   M   G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P+  S   ++   C+ GK++    LL  M +     +  T   ++   C  G+   V 
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E F  M  MG   +  +Y   I+G CK + V++A  +  E+  +G+KP V T+ TL  GL
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 343 FEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGN 396
            +I   ERA +LF+++ + +    +  TY   I G C      R ++       +G   N
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 397 TN 398
           TN
Sbjct: 349 TN 350


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 11/366 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N+++G L +       L +++++N     PD  TY+ L++   K G++     +   ++ 
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           +   P+  T T +++ LC   R+ +A  L  ++   G   N ITY+ L++GLC+      
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 237

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A+ L        G     F P+ VTYS +IDGLCK G +  A ++F +M   +  P  +T
Sbjct: 238 AVALLLGEVTRRG-----FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAIT 289

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y SLI G+C A D +EA  LL +MVD    P+V++   +M+  CK G++D+A  L   MV
Sbjct: 290 YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV 349

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+  T+ +L+DG C  G++    EL   +   GC    ++YN +++GYCK+ +V 
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAADTCTYRT 372
           +A  L  +   +G  P  VTYN L  G     + ++AL+   ++  +G         Y  
Sbjct: 410 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 469

Query: 373 FIDGLC 378
            +D LC
Sbjct: 470 ILDALC 475



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 177/353 (50%), Gaps = 12/353 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-V 67
           P  ++  +++  L      D    L + +   G+  +  TYS L++  CK  ++     +
Sbjct: 182 PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G + R  F P++VT++++I GLC   R+ +A  +F ++    C P  ITYN+LI G C
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYC 298

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    A+ L  +M + N        P+ +TY+ ++   CK G +D A ELF QM    
Sbjct: 299 RAGDMDEAIRLLGKMVDDN------CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+P+VVT+TSL+ G C      +A  LL E+  +G  P + + N +++  CK+ ++  A 
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILIN 305
            L+         PN  TYN L+ G C  G+ ++  +    + S G  C      Y I+++
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
             C++   ++A+  Y E+  +G  P   T+ T+   L +  Q ++A +L  EM
Sbjct: 473 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 188/396 (47%), Gaps = 24/396 (6%)

Query: 1   MRHMHP-----------SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY 49
           +RH+ P           SP PV   N +L  L   +   T ++LF ++  +G   +  TY
Sbjct: 26  LRHLGPLLLDEIRDRGLSPDPVE-LNTILAELCDARDTTTAMALFDKMAELGAV-NHTTY 83

Query: 50  SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
             LI+  CK   +     +   +      P  +    +I GLC   R+  A  ++ ++  
Sbjct: 84  YNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND 143

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
               P+ +TY  L++GL + G    A+ + +EM +          P+  T ++++  LC 
Sbjct: 144 -AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR------HVPDNTTLTVVVQSLCL 196

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI-EMVDQGVQPNVV 228
              VD A+EL  +M +  +  N +TY++L+ G C     +EA  LL+ E+  +G  P++V
Sbjct: 197 GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV 256

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + +++ LCK G++ +A   +D+  +    P A TYN+L+ G+C  G ++    L   M
Sbjct: 257 TYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 313

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
               C  D  +Y  L++ +CK   +++A  L+ ++    + P VVT+ +L  GL    + 
Sbjct: 314 VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 373

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           E AL+L  E+          TY   +DG C   QVR
Sbjct: 374 EDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 8/278 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+G   +    D  + L  ++      PD+ TY+ L++ FCKMG++   + +
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ +  +P+VVTFTSL+ GLC E R+ +A  L  ++   GC P + TYN +++G C+
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 404

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN- 187
           +     A  L  +  +        F PNTVTY+I++ G C+ G  D+A +   Q+  E  
Sbjct: 405 SNQVRKAEELVADFRSRG------FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458

Query: 188 -LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
               +V  Y  ++   C     ++A     EM+ +G  P   +   ++  LCK  +   A
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
             LL+ M++    P   T + ++  +C  G I +  EL
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 47/349 (13%)

Query: 13  SFNILLGCLAKNKHYDTVLSLF-KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++ L+  L K +  D  ++L    +   G  PD+ TYS +I+  CK G++     IF  
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +  SC AP  +T+ SLI G C    + EA  L  K+    C P+VITY TL++  C+ G 
Sbjct: 281 M--SC-APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  LF++M            P+ VT++ ++DGLC EG ++ A EL  ++      P 
Sbjct: 338 LDDAYELFQQMVANK------LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV------------------- 232
           + TY  ++ G+C +N   +A+ L+ +   +G  PN V+ N+                   
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 451

Query: 233 ------------------IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
                             I++ LC++G+ D+A +  + M+Q    P A T+ T++   C 
Sbjct: 452 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 511

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
             +  +  EL   M   G      + + +++ YC+   +++A  L +EL
Sbjct: 512 AHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 75/375 (20%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF-TKLKAFGCEPNVITYNTLINGLCRTG 130
           +L + +  +  TF  +++GL A +++     L   +++  G  P+ +  NT++  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A+ LF +M     E+G V   N  TY  +I  LCK   +D+A  L L MK   +NP
Sbjct: 61  DTTTAMALFDKM----AELGAV---NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNP 113

Query: 191 -----NVV-----------------------------TYTSLIHGFCHANDWNEAKGLLI 216
                NVV                             TYT L+HG   A    +A  +L 
Sbjct: 114 GTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQ 173

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC--- 273
           EMV     P+  +  V++  LC   ++D+A  L++ M+   +  NA TY+ L+DG C   
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233

Query: 274 --------LTGKIN----------------------RVKELFVSMESMGCKHDDFSYNIL 303
                   L G++                       R+++     E M C     +YN L
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSL 293

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I GYC+  +++EA+ L  ++      P V+TY TL     ++ + + A +LF +M  N +
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353

Query: 364 AADTCTYRTFIDGLC 378
           + D  T+ + +DGLC
Sbjct: 354 SPDVVTFTSLVDGLC 368



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 10/180 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N ++    K+        L     S G  P+  TY+IL+   C+ G+      
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 68  IFGRILRSCFAP---NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              + L S   P   +V  +  ++  LC + R  +A   + ++   G  P   T+ T++ 
Sbjct: 449 YLDQ-LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC+      A  L +EM      I     P   T   ++   C+ G + KA EL  +++
Sbjct: 508 ALCKAHQPQQAHELLEEM------IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 199/370 (53%), Gaps = 12/370 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK--MGQVSL----GF 66
           S N LL CLA+    + + SLF+ + S G  P+++TY+I++N +CK   G+  +      
Sbjct: 216 SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQAT 275

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I   + R+  +P VVT+++ I GLC    +  A      L +     NV  YN +I+GL
Sbjct: 276 EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    AL + +EM +          P+  TYSI+I G CK+G V+K   L  +MKY 
Sbjct: 336 CKKGELDEALKVLEEMKSCG------ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYS 389

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+ P++V+Y+SL HG C     + +  +  ++   G + +  + ++++   C  G +D+A
Sbjct: 390 NMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSA 449

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L++ MV+ ++ P+   + +L+ GFC  G      E F  M   G      + N++I+ 
Sbjct: 450 HKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDA 509

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+   VEEAL+L NE+  +GI P + TYN + + L + R++ERAL+LF  M   +V   
Sbjct: 510 HCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569

Query: 367 TCTYRTFIDG 376
              Y T IDG
Sbjct: 570 VVVYSTLIDG 579



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 183/363 (50%), Gaps = 8/363 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++ L   L K +  D  L +F+ L + G   D   YSILI  FC  G +     +
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKL 452

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R+  AP+   F SL+ G C     V A   F  +   G  P++ T N +I+  CR
Sbjct: 453 MEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCR 512

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    ALNL  EM T G      +F PN  TY+ +I+ LCKE   ++A ELF  M   N
Sbjct: 513 EGRVEEALNLMNEMQTQG------IF-PNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VV Y++LI GF   ++  +A  L   M+  GV P++V+  +++N LC   +M  A 
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M +  + P+  +Y +++ GFC  G + +   LF  M   G      +Y  L++GY
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  L +E+  KGI P VVTYN L          ++AL++  EM+ N V  D 
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDH 745

Query: 368 CTY 370
            TY
Sbjct: 746 MTY 748



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 175/368 (47%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N ++  L K    D  L + + + S G+ PD+YTYSILI+ FCK G V  G  +  
Sbjct: 325 VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIE 384

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P++V+++SL  GLC +     +  +F  L A G + +   Y+ LI G C  G
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L +EM   N        P+   +  ++ G CK G    A E F  M    + P
Sbjct: 445 DLDSAHKLMEEMVRNN------LAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILP 498

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ T   +I   C      EA  L+ EM  QG+ PN+ + N ++N LCK  K + A  L 
Sbjct: 499 SIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELF 558

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
            LM++ +V P+   Y+TL+DGF       +   L+  M  +G   D  +Y ILIN  C  
Sbjct: 559 PLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHR 618

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA +L+ ++   G+ P  ++Y ++  G   I    +A  LF EM          TY
Sbjct: 619 SRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTY 678

Query: 371 RTFIDGLC 378
            + +DG C
Sbjct: 679 TSLVDGYC 686



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 193/380 (50%), Gaps = 6/380 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++  +  L +  + ++ L   + L S     ++Y Y+ +I+  CK G++     +
Sbjct: 288 PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+V T++ LI G C +  + +   L  ++K    EP++++Y++L +GLC+
Sbjct: 348 LEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK 407

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              + ++L++F+++    G  G  +K +   YSI+I G C +G +D A +L  +M   NL
Sbjct: 408 KRLSDISLDIFRDL----GAAG--YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNL 461

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   + SL+HGFC    W  A      M++ G+ P++ + NVI++  C+ G+++ A  
Sbjct: 462 APDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALN 521

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M    + PN FTYN +++  C   K  R  ELF  M           Y+ LI+G+ 
Sbjct: 522 LMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFA 581

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    ++AL LY  +   G+ P +V Y  L + L    +   A  LF +M  N +  D  
Sbjct: 582 KQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKI 641

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           +Y + I G C    +R  +A
Sbjct: 642 SYTSVIAGFCRIGDMRKAWA 661



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 55/331 (16%)

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV---------VFKP 155
           T +K +G   ++  + T++N L   G  +    L +++     ++ +         +  P
Sbjct: 113 TTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESP 172

Query: 156 NTVTYSIIIDGLCKEGF-----VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
                S+I+  L  + F     ++ A ++FLQ K   L  +  +   L+     AN    
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKN--GKMD----NASRLLDLMVQCDVRP---- 260
            + L  EM   G  PNV +  ++MN  CK   G+ D     A+ +L+ M +    P    
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292

Query: 261 -------------------------------NAFTYNTLMDGFCLTGKINRVKELFVSME 289
                                          N + YN ++ G C  G+++   ++   M+
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           S G   D ++Y+ILI+G+CK  +VE+ L L  E+ +  ++P++V+Y++LFHGL + R ++
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSD 412

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +L +F ++       D   Y   I G C++
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 187/339 (55%), Gaps = 12/339 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N LL  L K   +D +  L+  + S  LFP + TY++L++  C+ G V     +
Sbjct: 149 PAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSL 208

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P VV +T+LI GLC+ES+++EA ++F ++K  G  PN+ TYN L++G C+
Sbjct: 209 ISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCK 268

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T +   AL+L++ M +         +PN VT+ I+ID LCK   +  A+  F+QM    +
Sbjct: 269 TANVKQALHLYQGMLDDG------LQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGV 322

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV + SLI G+  A + +EA  LL+EM    + P+V + ++++   C+ G ++ A  
Sbjct: 323 VPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADD 382

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS------MESMGCKHDDFSYNI 302
           +L  M +  V  N+  YN+L+DG+C  G + +  E+F +      M   G + D  +Y +
Sbjct: 383 ILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAV 442

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           ++ G+   K + + + L+ ++   GI P  VT   +  G
Sbjct: 443 MLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRG 481



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 170/353 (48%), Gaps = 15/353 (4%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S F +L+   ++    D  L ++ +   +G FP +   + L+N   K     + + ++  
Sbjct: 120 SVFGVLIIAFSEVGLVDEALRVYLK---VGAFPAVQACNALLNGLLKKSSFDIMWELYNN 176

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++     P VVT+  L+   C +  ++ A +L +++   G EP V+ Y TLI+GLC    
Sbjct: 177 MVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESK 236

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
            + A ++F++M +       VF PN  TY++++DG CK   V +A  L+  M  + L PN
Sbjct: 237 LMEAESMFRQMKDSG-----VF-PNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPN 290

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVT+  LI   C   +   A+   ++M   GV PNVV  N +++   K G    A+ LL 
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLL 350

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  + P+ FTY+ L+   C  G +    ++   ME  G   +   YN LI+GYCK  
Sbjct: 351 EMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEG 410

Query: 312 EVEEALSLYNELPF------KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +E+AL ++    F       G++P  + Y  +  G    +     + L  +M
Sbjct: 411 NMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADM 463



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 15/334 (4%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +LI  F ++G V     ++   L+    P V    +L+ GL  +S       L+  + 
Sbjct: 122 FGVLIIAFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMV 178

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
           +    P V+TYN L++  CR G  + A +L  EM     E      P  V Y+ +I GLC
Sbjct: 179 SRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIE------PTVVIYTTLIHGLC 232

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            E  + +A+ +F QMK   + PN+ TY  L+ G+C   +  +A  L   M+D G+QPNVV
Sbjct: 233 SESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVV 292

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +  ++++ LCK  ++  A R    M +  V PN   +N+L+DG+   G  +   +L + M
Sbjct: 293 TFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEM 352

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           E      D F+Y+ILI   C+   VEEA  +   +  +G+    V YN+L  G  +    
Sbjct: 353 EKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNM 412

Query: 349 ERAL------KLFVEMQGNDVAADTCTYRTFIDG 376
           E+AL      K F +M+ N +  D   Y   + G
Sbjct: 413 EKALEIFKATKFFSDMRRNGLRPDALAYAVMLQG 446



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 149/316 (47%), Gaps = 11/316 (3%)

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           SL F    ++  S F P+V  F  LI        + EA  ++ K+ AF   P V   N L
Sbjct: 103 SLVFNALSQLRGSKFNPSV--FGVLIIAFSEVGLVDEALRVYLKVGAF---PAVQACNAL 157

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           +NGL +     +   L+  M +          P  VTY++++D  C++G V +AK L  +
Sbjct: 158 LNGLLKKSSFDIMWELYNNMVSRR------LFPTVVTYNVLVDACCRQGDVLRAKSLISE 211

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + + P VV YT+LIHG C  +   EA+ +  +M D GV PN+ + NV+M+  CK   
Sbjct: 212 MVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTAN 271

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  L   M+   ++PN  T+  L+D  C   ++   +  FV M   G   +   +N 
Sbjct: 272 VKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNS 331

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+GY K     EA  L  E+    I P V TY+ L      +   E A  +   M+   
Sbjct: 332 LIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEG 391

Query: 363 VAADTCTYRTFIDGLC 378
           V A++  Y + IDG C
Sbjct: 392 VPANSVVYNSLIDGYC 407



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 35/273 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+  L          S+F+++   G+FP+LYTY++L++ +CK   V     +
Sbjct: 219 PTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHL 278

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L     PNVVTF  LI  LC    ++ A   F ++  FG  PNV+ +N+LI+G  +
Sbjct: 279 YQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSK 338

Query: 129 TGHTIVALNLFKEM---------------TNGNGEIGVV--------------FKPNTVT 159
            G+   A +L  EM                     +G V                 N+V 
Sbjct: 339 AGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVV 398

Query: 160 YSIIIDGLCKEGFVDKAKELFL------QMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           Y+ +IDG CKEG ++KA E+F        M+   L P+ + Y  ++ G  +A    +   
Sbjct: 399 YNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMM 458

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           L  +M+  G+ PN V+S V+      NG + +A
Sbjct: 459 LHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 32/257 (12%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-----YTSLIHGFCHAND 207
             P +   +II+     E  +D    +  Q      NPN  T     Y+++IH    A  
Sbjct: 24  LSPPSDLTTIILHSKTPEQALDTFTSVLKQ------NPNNPTKKLHLYSAVIHYLTGAKV 77

Query: 208 WNEAKGL---LIEMVDQGVQPNVVSSNVIMNELCK-NGKMDNASR------------LLD 251
           +  A+ L   LI+ + Q   P  V+S ++ N L +  G   N S             L+D
Sbjct: 78  YPTARCLTKDLIQTLLQSCTPRRVNS-LVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVD 136

Query: 252 LMVQCDVRPNAFTY----NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             ++  ++  AF      N L++G       + + EL+ +M S        +YN+L++  
Sbjct: 137 EALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDAC 196

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  +V  A SL +E+  KGI+PTVV Y TL HGL    +   A  +F +M+ + V  + 
Sbjct: 197 CRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNL 256

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY   +DG C    V+
Sbjct: 257 YTYNVLMDGYCKTANVK 273


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 218/437 (49%), Gaps = 71/437 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV--SLGF 66
           P   +FN+L+  L ++   D    LF +++  G  P+ +T  IL+  FC+ G+   +L F
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208

Query: 67  V---IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           V   + G +       N V + +L+   C +    EA  L  ++   G  P+V+T+N+ I
Sbjct: 209 VDGKMGGNV-------NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRI 261

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           + LCR G    A  +F++M   +GE+G+  KPN VT+++++ G C+EG +++A+ L   M
Sbjct: 262 SALCRAGKVFEASRIFRDM-QMDGELGLP-KPNVVTFNLMLKGFCQEGMMEEARSLVETM 319

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K      ++ +Y + + G        E + +L EMV+ G++PN+ S N++M+ LC+N  M
Sbjct: 320 KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC---------- 293
            +A RL+DLMV   V P+  TY TL+ G+C  GK+   K +   M   GC          
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 294 ------------------KHDDFSY-------NILINGYCKNKEVEEALSLYNEL----- 323
                             K ++ SY       NI++NG C+N E+E+A  + +E+     
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499

Query: 324 -------PFKGI----------KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
                  P  G+           P V+TY TL +GL ++ + E A K F+EM   ++  D
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPD 559

Query: 367 TCTYRTFIDGLCVRPQV 383
           + TY TF+   C + ++
Sbjct: 560 SVTYDTFVLNFCKQGKI 576



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 189/401 (47%), Gaps = 32/401 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+    K    D    L +R+   GL PD+ T++  I+  C+ G+V     IF  + 
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQ 281

Query: 74  RS----CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                    PNVVTF  ++KG C E  + EA +L   +K  G   ++ +YNT + GL R 
Sbjct: 282 MDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G  +   ++  EM   NG      +PN  +Y+I++DGLC+   +  A+ L   M    + 
Sbjct: 342 GKLLEGRSVLDEMVE-NG-----IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVY 395

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ VTYT+L+HG+C      EAK +L EM+ +G  PN  + N ++N L K G+   A  +
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEM 455

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH-------------- 295
           L  M +   + +  T N +++G C  G++ +  E+   M + G                 
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSI 515

Query: 296 --------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
                   D  +Y  LING CK  ++EEA   + E+  K + P  VTY+T      +  +
Sbjct: 516 HNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGK 575

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              AL++  +M+ N  +    TY + I GL  + Q+   Y 
Sbjct: 576 ISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYG 616



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 189/384 (49%), Gaps = 35/384 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N  L  L +N       S+   +   G+ P++Y+Y+I+++  C+   +     +  
Sbjct: 328 LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMD 387

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++ +   P+ VT+T+L+ G C++ ++ EA A+  ++   GC PN  T NTL+N L + G
Sbjct: 388 LMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEG 447

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN- 189
               A  + ++M   +      ++ +TVT +I+++GLC+ G ++KA E+  +M  +  N 
Sbjct: 448 RKSEAEEMLQKMNEKS------YQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNS 501

Query: 190 ---------------------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
                                P+V+TYT+LI+G C      EAK   IEM+ + + P+ V
Sbjct: 502 LGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSV 561

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + +  +   CK GK+ +A R+L  M +        TYN+L+ G    G+I  +  L   M
Sbjct: 562 TYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHGLFEIRQ 347
              G   D  +YN +IN  C+  + ++A SL +E+  KG + P V ++  L     +   
Sbjct: 622 RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGD 681

Query: 348 AERALKLFVEMQGNDVAADTCTYR 371
            + A +LF      DVA   C ++
Sbjct: 682 FKVACELF------DVALSVCGHK 699



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 156/350 (44%), Gaps = 47/350 (13%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  ++++   P   TF  LI+ LC  + +  A  LF K+   GC+PN  T   L+ G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G T  AL        GN         N V Y+ ++   CK+   D+A++L  +M  + 
Sbjct: 198 RAGRTKQALEFVDGKMGGN--------VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV----QPNVVSSNVIMNELCKNGKM 243
           L P+VVT+ S I   C A    EA  +  +M   G     +PNVV+ N+++   C+ G M
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMM 309

Query: 244 DNASRL-----------------------------------LDLMVQCDVRPNAFTYNTL 268
           + A  L                                   LD MV+  + PN ++YN +
Sbjct: 310 EEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIV 369

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           MDG C    +   + L   M S G   D  +Y  L++GYC   +V EA ++ NE+  KG 
Sbjct: 370 MDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGC 429

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            P   T NTL + L++  +   A ++  +M       DT T    ++GLC
Sbjct: 430 HPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLC 479



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 195/451 (43%), Gaps = 89/451 (19%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+NI++  L +N        L   + S G++PD  TY+ L++ +C  G+V     I
Sbjct: 361 PNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAI 420

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    PN  T  +L+  L  E R  EA  +  K+     + + +T N ++NGLCR
Sbjct: 421 LNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCR 480

Query: 129 TGHTIVALNLFKEM-TNGNGEIG---------------VVFKPNTVTYSIIIDGLCKEGF 172
            G    A  +  EM T+G   +G                   P+ +TY+ +I+GLCK G 
Sbjct: 481 NGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGK 540

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN----------------------- 209
           +++AK+ F++M  +NL+P+ VTY + +  FC     +                       
Sbjct: 541 LEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNS 600

Query: 210 ------------EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
                       E  GL+ EM ++G+ P++ + N ++N LC+ GK  +A+ LL  M+   
Sbjct: 601 LILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKG 660

Query: 258 V-RPNAFTYNTLMDGFCLTG----------------------------------KINRVK 282
           V  PN  ++  L+  FC +G                                  K++  K
Sbjct: 661 VVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAK 720

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ELF +         +F Y  LI+  CK+  +++A  L  +L  KG      ++  +  GL
Sbjct: 721 ELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGL 780

Query: 343 FEIRQAERALKL--FVEMQGNDVAADTCTYR 371
            +    ++A +L   +E+   D  +D  TYR
Sbjct: 781 SKRGNKQQADELGRIMELALEDKTSDR-TYR 810



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 146/287 (50%), Gaps = 12/287 (4%)

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            +L+T +   G  P   T+N LI  LC +     A  LF +M+    E G   +PN  T 
Sbjct: 136 TSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMS----EKGC--QPNKFTV 189

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            I++ G C+ G   +A E F+  K    N N V Y +L+  FC  +  +EA+ L+  M +
Sbjct: 190 GILVRGFCRAGRTKQALE-FVDGKMGG-NVNRVVYNTLVSSFCKQDMNDEAEKLVERMTE 247

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDV---RPNAFTYNTLMDGFCLTG 276
           +G+ P+VV+ N  ++ LC+ GK+  ASR+  D+ +  ++   +PN  T+N ++ GFC  G
Sbjct: 248 KGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEG 307

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +   + L  +M+  G      SYN  + G  +N ++ E  S+ +E+   GI+P + +YN
Sbjct: 308 MMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYN 367

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +  GL        A +L   M  N V  DT TY T + G C + +V
Sbjct: 368 IVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L+K         +  ++    L PD++TY+ LI   C+   + L F +
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA---------------------------- 100
           F R+++    PN VT+++LI GLC E R+ EA                            
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315

Query: 101 -------AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                    L  ++K  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V 
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV- 370

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PNTVTY+ +I+ LC  G    A ++F  M+      N  TY  +I G C   D  +A  
Sbjct: 371 -PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M+  G  P VV+ N ++N     G ++NA+RLLDLM +    P+ +TYN L+ GF 
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+      F  M   G   +  SY  LI+G+ K+ +V+ ALSL   +   G  P V 
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +YN + +GL +  +   A K+  +M    +  +  TY T IDGLC   + +F +
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 189/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L      D  L + + +   G+ P +YTY++ I   C +        +
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ +    PNV T+T+LI GL    ++  A  L+ K+   G  PN +TYN LIN LC 
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M  G+G +      NT TY+ II GLC  G ++KA  LF +M     
Sbjct: 386 GGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY +LI+G+    + N A  LL  M + G +P+  + N +++   K GK+++AS 
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+C + PN  +Y  L+DG    GK++    L   ME MGC  +  SYN +ING  
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  + +++  +G+ P V+TY TL  GL    + + A K+F +M+      +  
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 369 TYRTFIDGLC 378
           TY + I GLC
Sbjct: 620 TYSSLIYGLC 629



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N LL  LAK +  +   +L+K++ + G+ P L T++ LIN   K G+V    +I  +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +   +P+V T+TSLI G C    +  A  +F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL++ +EM     E G+  +P   TY++ I  LC     ++A EL  +MK     PNV
Sbjct: 285 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G         A GL  +M+ +G+ PN V+ N ++NELC  G+   A ++   
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M       N  TYN ++ G CL G I +   LF  M  MG      +YN LINGY     
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V  A  L + +   G +P   TYN L  G  +  + E A   F EM    +  +  +Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 373 FIDG 376
            IDG
Sbjct: 519 LIDG 522



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 10/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     + T L +F  +   G   +  TY+ +I   C  G +    V+
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P VVT+ +LI G   +  +  AA L   +K  GCEP+  TYN L++G  +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F+EM     E G+   PN V+Y+ +IDG  K+G VD A  L  +M+    
Sbjct: 491 WGKLESASFYFQEMV----ECGL--NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPNV +Y ++I+G    N ++EA+ +  +MV+QG+ PNV++   +++ LC+NG+   A +
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +    PN +TY++L+ G C  GK +  +     M  +GC+    +Y+ L++G C
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLC 660

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +     EA  L  ++  +G  P    Y +L     +  + + ALK+F  ++         
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
            YR  I  LC   QV    A
Sbjct: 721 IYRALICALCKAGQVEEAQA 740



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 179/375 (47%), Gaps = 10/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L++    +  + L+ ++   GL P+  TY+ LIN  C  G+ S    I
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N  T+  +IKGLC    I +A  LF K+   G  P V+TYNTLING   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L   M     E      P+  TY+ ++ G  K G ++ A   F +M    L
Sbjct: 456 KGNVNNAARLLDLMKENGCE------PDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPN V+YT+LI G       + A  LL  M + G  PNV S N ++N L K  +   A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV+  + PN  TY TL+DG C  G+     ++F  ME   C  + ++Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  + +EA      +   G +PT+ TY+TL  GL    +   A +L  +M+      D  
Sbjct: 630 QEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 369 TYRTFIDGLCVRPQV 383
            Y + +   C   +V
Sbjct: 686 IYYSLLIAHCKNLEV 700



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 10  PVSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P     IL+    +N+     V      ++ +G    LY+ + L+    K   V     +
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++L S   P+++TF +LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +  +A  +F  M     +      PN+VTYS +I+GLC EG VD+A ++  +M  + +
Sbjct: 246 NRNLDLAFGVFDRMVKEGCD------PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TYT  I   C      EA  L+  M  +G +PNV +   +++ L + GK++ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  + PN  TYN L++  C+ G+ +   ++F  ME  G   +  +YN +I G C
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++E+A+ L+ ++   G  PTVVTYNTL +G         A +L   M+ N    D  
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479

Query: 369 TYRTFIDG 376
           TY   + G
Sbjct: 480 TYNELVSG 487



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 180/362 (49%), Gaps = 10/362 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+       + +    L   +   G  PD +TY+ L++ F K G++      
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN V++T+LI G   + ++  A +L  +++  GC PNV +YN +INGL +
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +  +M     E G++  PN +TY+ +IDGLC+ G    A ++F  M+    
Sbjct: 561 ENRFSEAEKICDKMV----EQGLL--PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY+SLI+G C     +EA+     M + G +P + + + +++ LC+ G+   A +
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M +    P+   Y +L+   C   +++   ++F S+E+ G +     Y  LI   C
Sbjct: 671 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 730

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +VEEA +L++ +  K      + +  L  GL +  + +  +KL   M+  +   +  
Sbjct: 731 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQ 790

Query: 369 TY 370
           TY
Sbjct: 791 TY 792



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 166/328 (50%), Gaps = 16/328 (4%)

Query: 53  INCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +NCF  M           R++R   FAP       +IK    E  I   A    ++   G
Sbjct: 108 MNCFISM---------LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMG 158

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
              ++ + NTL+  L +      A NL+K+M N         +P+ +T++ +I+ L K+G
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKG 212

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V +A+ +  Q+   +L+P+V TYTSLI G C   + + A G+   MV +G  PN V+ +
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++N LC  G++D A  +L+ M++  + P  +TY   +   C         EL   M+  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC+ +  +Y  LI+G  +  ++E A+ LY+++  +G+ P  VTYN L + L    +   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           LK+F  M+G+   A+T TY   I GLC+
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCL 420



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 11/284 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P PVS +  L+   +K+   D  LSL KR+  +G  P++ +Y+ +IN   K  + S   
Sbjct: 510 NPNPVS-YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I  +++     PNV+T+T+LI GLC   R   A  +F  ++   C PN+ TY++LI GL
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  +         EIG   +P   TYS ++ GLC++G   +A++L   MK  
Sbjct: 629 CQEGKADEAERM--------SEIGC--EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 678

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+   Y SL+   C   + + A  +   +  +G Q ++     ++  LCK G+++ A
Sbjct: 679 GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 738

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             L D M++ +   +   +  L+DG    G+++   +L   MES
Sbjct: 739 QALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 782



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 52/125 (41%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  LL    KN   D  L +F  + + G    L  Y  LI   CK GQV     +
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 741

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L   +  + + +T L+ GL  E  +     L   +++    PN+ TY  L   L R
Sbjct: 742 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 801

Query: 129 TGHTI 133
            G +I
Sbjct: 802 IGKSI 806


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFNIL+G   +       +  +K +    + PD+ ++S LI  F + G++      
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V +T +I G C    + EA  +  ++  FGC P+V+TYNTL+NGLC+
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L  EM     E GV   P+  T++ +I G C++G  + A +LF  +  + L
Sbjct: 380 QHRLLDAEKLLNEME----ERGVT--PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY SLI G C   D  +A  L  +M  + + PN ++ +++++  C+ G++++A  
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFG 493

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD MV+    PN  TYN+++ G+C +G + + ++    M       D  ++N LI+GY 
Sbjct: 494 FLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYI 553

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +  A +++N +  + ++P  VTYN + +G  E    + A ++F  M  + +  D  
Sbjct: 554 KEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRY 613

Query: 369 TYRTFIDG 376
           TY + I+G
Sbjct: 614 TYMSLING 621



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 195/366 (53%), Gaps = 7/366 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+H + +P  V SF+ L+G  ++    D   +  + +  +GL PD   Y+++I  FC+ G
Sbjct: 288 MQHRYVTPD-VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +S    +   ++     P+VVT+ +L+ GLC + R+++A  L  +++  G  P++ T+ 
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G CR G+   AL LF  +           +P+ VTY+ +IDG+C++G + KA EL+
Sbjct: 407 TLIHGYCRQGNFENALQLFDTLLRQR------LRPDVVTYNSLIDGMCRKGDLAKANELW 460

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M    + PN +TY+ LI   C      +A G L EMV +G  PN+ + N I+   C++
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +    + L  M Q +V P+  T+NTL+ G+     ++    +F  ME    + D  +Y
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N++ING+ +   +++A  ++  +   GI+P   TY +L +G      +++A +L  EM  
Sbjct: 581 NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640

Query: 361 NDVAAD 366
              A D
Sbjct: 641 RGFAPD 646



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 196/393 (49%), Gaps = 29/393 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++    K   +D   ++   +    +FPD+ T+++LI+   + G V     +   +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P +VT+ S++KGLC   R  +A  +F  +      P+V ++N LI G CR G  
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 133 IVALNLFKEMTNG------------------NGEI-----------GVVFKPNTVTYSII 163
             A+  +KEM +                    GE+           G+   P+ V Y+++
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G C+ G + +A  +  +M      P+VVTY +L++G C  +   +A+ LL EM ++GV
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P++ +   +++  C+ G  +NA +L D +++  +RP+  TYN+L+DG C  G + +  E
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L+  M +     +  +Y+ILI+ +C+  +VE+A    +E+  KG  P + TYN++  G  
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                ++  +   +M+ ++V  D  T+ T I G
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 20/391 (5%)

Query: 5   HPSPPPVSSFNILLGCLAK-------NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           H  P P S+ N LL  L++        + Y  VLS    +N+       YT +I+++ +C
Sbjct: 116 HRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNA-------YTLNIMVHSYC 168

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K  +      +   + + C  P+VVT   LI        +  A AL   +   G +P ++
Sbjct: 169 KTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIV 228

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYN+++ GLC+      A  +F+ M   +        P+  +++I+I G C+ G V +A 
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTMDQCS------VAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           + + +M++  + P+VV+++ LI  F    + + A   L EM   G+ P+ V   +++   
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C+ G M  A R+ D MV     P+  TYNTL++G C   ++   ++L   ME  G   D 
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            ++  LI+GYC+    E AL L++ L  + ++P VVTYN+L  G+       +A +L+ +
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           M   ++  +  TY   ID  C + QV   + 
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFG 493



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 171/373 (45%), Gaps = 7/373 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P P   F++L+    +++        F+ L    +       + L+    + G   L 
Sbjct: 83  PTPQP-QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLA 141

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              +  +L S    N  T   ++   C       A  + ++++     P+V+T+N LI+ 
Sbjct: 142 QEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDA 201

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             R G    A+ L   M N         KP  VTY+ ++ GLCK    DKAKE+F  M  
Sbjct: 202 RFRAGDVDAAIALVDSMANRG------LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQ 255

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            ++ P+V ++  LI GFC   +  EA     EM  + V P+VVS + ++    + G+MD+
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDH 315

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A   L  M    + P+   Y  ++ GFC  G ++    +   M   GC  D  +YN L+N
Sbjct: 316 AGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLN 375

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK   + +A  L NE+  +G+ P + T+ TL HG       E AL+LF  +    +  
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435

Query: 366 DTCTYRTFIDGLC 378
           D  TY + IDG+C
Sbjct: 436 DVVTYNSLIDGMC 448



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 144/289 (49%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L K         L   +   G+ PDL T++ LI+ +C+ G       +
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +LR    P+VVT+ SLI G+C +  + +A  L+  + A    PN ITY+ LI+  C 
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A     EM    G +     PN  TY+ II G C+ G V K ++   +M+ +N+
Sbjct: 485 KGQVEDAFGFLDEMVK-KGNL-----PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++T+ +LIHG+    + + A  +   M  + V+P+ V+ N+I+N   + G M +A R
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           +   M    + P+ +TY +L++G    G   +  +L   M   G   DD
Sbjct: 599 VFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 4/213 (1%)

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +E+   +   +  P    +  LI  +  +    EA      ++D  V     +SN ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           L + G    A     L++  D   NA+T N ++  +C T + +    +   ME      D
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             ++N+LI+   +  +V+ A++L + +  +G+KP +VTYN++  GL + R+ ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 357 EMQGNDVAADTCTYRTFIDGLC----VRPQVRF 385
            M    VA D  ++   I G C    V+  V+F
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKF 284


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 208/405 (51%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + FN LL  +  +  ++   S F   N   +  D+Y++ ILI   C+ G++   F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF------------------------ 104
              +    F+PNVV +T+LI G C +  I +A  LF                        
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 105 -----------TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                       K++  G  PN+ TYN ++N LC+ G T  A  +F EM     E GV  
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGV-- 299

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             N VTY+ +I GLC+E  +++A ++  QMK + +NPN++TY +LI GFC      +A  
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  ++  +G+ P++V+ N++++  C+ G    A++++  M +  ++P+  TY  L+D F 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +  + +  +L +SME +G   D  +Y++LI+G+C   ++ EA  L+  +  K  +P  V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            YNT+  G  +   + RALKL  EM+  ++A +  +YR  I+ LC
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 187/359 (52%), Gaps = 6/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    K    +    LF  +  +GL  +  TY++LIN   K G    GF +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++      PN+ T+  ++  LC + R  +A  +F +++  G   N++TYNTLI GLCR
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                + LN   ++ +     G+   PN +TY+ +IDG C  G + KA  L   +K   L
Sbjct: 316 E----MKLNEANKVVDQMKSDGI--NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++VTY  L+ GFC   D + A  ++ EM ++G++P+ V+  ++++   ++  M+ A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  + P+  TY+ L+ GFC+ G++N    LF SM    C+ ++  YN +I GYC
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K      AL L  E+  K + P V +Y  +   L + R+++ A +L  +M  + +   T
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 192/370 (51%), Gaps = 7/370 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + +++    +++  +  +S F  +   G  P    ++ L+         +  +  F    
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +S    +V +F  LIKG C    I ++  L  +L  FG  PNV+ Y TLI+G C+ G   
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A +LF EM    G++G+V   N  TY+++I+GL K G   +  E++ +M+ + + PN+ 
Sbjct: 216 KAKDLFFEM----GKLGLV--ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY  +++  C      +A  +  EM ++GV  N+V+ N ++  LC+  K++ A++++D M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + PN  TYNTL+DGFC  GK+ +   L   ++S G      +YNIL++G+C+  + 
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             A  +  E+  +GIKP+ VTY  L          E+A++L + M+   +  D  TY   
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 374 IDGLCVRPQV 383
           I G C++ Q+
Sbjct: 450 IHGFCIKGQM 459



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 34/250 (13%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G     F   +  L    + E        Y  +I+ +  +   N +     EMVD G
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 223 VQP----------------------------------NVVSSNVIMNELCKNGKMDNASR 248
             P                                  +V S  +++   C+ G+++ +  
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +    PN   Y TL+DG C  G+I + K+LF  M  +G   ++ +Y +LING  
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++   +Y ++   G+ P + TYN + + L +  + + A ++F EM+   V+ +  
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304

Query: 369 TYRTFIDGLC 378
           TY T I GLC
Sbjct: 305 TYNTLIGGLC 314


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 183/336 (54%), Gaps = 6/336 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           ++  + +   GL PD   Y+++I  FC+ G +S    +   ++     P+VVT+ +L+ G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC E R+++A  L  +++  G  P++ T+ TLI+G C  G    AL LF  M N      
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR---- 116

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
              +P+ VTY+ +IDG+C++G +DKA +L+  M    + PN VTY+ LI   C      +
Sbjct: 117 --LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 174

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A G L EM+++G+ PN+++ N I+   C++G +    + L  M+   V P+  TYNTL+ 
Sbjct: 175 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 234

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+    K++   +L   ME    + D  +YN+LING+  +  V+EA  ++ ++  KGI+P
Sbjct: 235 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 294

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
              TY ++ +G      ++ A +L  EM     A D
Sbjct: 295 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 167/303 (55%), Gaps = 8/303 (2%)

Query: 76  CFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           CF   P+ V +T +I G C    + +A  +  ++   GC P+V+TYNTL+NGLC+    +
Sbjct: 9   CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 68

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  EM     E GV   P+  T++ +I G C EG +DKA +LF  M  + L P++V
Sbjct: 69  DAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G C   D ++A  L  +M  + + PN V+ +++++  C+ G++++A   LD M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +   + PN  TYN+++ G+C +G +++ ++    M       D  +YN LI+GY K  ++
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A  L N +  + ++P VVTYN L +G       + A  +F +M    +  D  TY + 
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302

Query: 374 IDG 376
           I+G
Sbjct: 303 ING 305



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 175/322 (54%), Gaps = 6/322 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    + +++G   +       L +   +   G  PD+ TY+ L+N  CK  ++     +
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P++ TFT+LI G C E ++ +A  LF  +      P+++TYNTLI+G+CR
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +L+ +M +       +F PN VTYSI+ID  C++G V+ A     +M  + +
Sbjct: 134 QGDLDKANDLWDDMHSRE-----IF-PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 187

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN++TY S+I G+C + + ++ +  L +M+   V P++++ N +++   K  KM +A +
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 247

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL++M +  V+P+  TYN L++GF + G +     +F  M + G + D ++Y  +ING+ 
Sbjct: 248 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 307

Query: 309 KNKEVEEALSLYNELPFKGIKP 330
                +EA  L++E+  +G  P
Sbjct: 308 TAGNSKEAFQLHDEMLQRGFAP 329



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 148/283 (52%), Gaps = 6/283 (2%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
           A   +++ FG  P+ + Y  +I G CR G    AL +  EM      +G    P+ VTY+
Sbjct: 2   AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM------VGCGCLPDVVTYN 55

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +++GLCKE  +  A+ L  +M+   + P++ T+T+LIHG+C     ++A  L   M++Q
Sbjct: 56  TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 115

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            ++P++V+ N +++ +C+ G +D A+ L D M   ++ PN  TY+ L+D  C  G++   
Sbjct: 116 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 175

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                 M + G   +  +YN +I GYC++  V +      ++    + P ++TYNTL HG
Sbjct: 176 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +  +   A KL   M+   V  D  TY   I+G  V   V+
Sbjct: 236 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L K +       L   +   G+ PDL T++ LI+ +C  G++     +
Sbjct: 49  PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P++VT+ +LI G+C +  + +A  L+  + +    PN +TY+ LI+  C 
Sbjct: 109 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A     EM N     G++  PN +TY+ II G C+ G V K ++   +M    +
Sbjct: 169 KGQVEDAFGFLDEMINK----GIL--PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+++TY +LIHG+   +  ++A  LL  M  + VQP+VV+ N+++N    +G +  A  
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           + + M    + P+ +TY ++++G    G      +L   M   G   DD
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 6/254 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +F  L+         D  L LF  + +  L PD+ TY+ LI+  C+ G +     
Sbjct: 83  PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 142

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  +      PN VT++ LI   C + ++ +A     ++   G  PN++TYN++I G C
Sbjct: 143 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 202

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R+G+        ++M            P+ +TY+ +I G  KE  +  A +L   M+ E 
Sbjct: 203 RSGNVSKGQKFLQKMMVNK------VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VVTY  LI+GF    +  EA  +  +M  +G++P+  +   ++N     G    A 
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316

Query: 248 RLLDLMVQCDVRPN 261
           +L D M+Q    P+
Sbjct: 317 QLHDEMLQRGFAPD 330


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+  L+K         +  ++    L PD++TY+ LI   C+   + L F +
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA---------------------------- 100
           F R+++    PN VT+++LI GLC E R+ EA                            
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315

Query: 101 -------AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                    L  ++K  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V 
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV- 370

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PNTVTY+ +I+ LC  G    A ++F  M+      N  TY  +I G C   D  +A  
Sbjct: 371 -PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M+  G  P VV+ N ++N     G ++NA+RLLDLM +    P+ +TYN L+ GF 
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+      F  M   G   +  SY  LI+G+ K+ +V+ ALSL   +   G  P V 
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +YN + +GL +  +   A K+  +M    +  +  TY T IDGLC   + +F +
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 189/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L      D  L + + +   G+ P +YTY++ I   C +        +
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ +    PNV T+T+LI GL    ++  A  L+ K+   G  PN +TYN LIN LC 
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F  M  G+G +      NT TY+ II GLC  G ++KA  LF +M     
Sbjct: 386 GGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY +LI+G+    + N A  LL  M + G +P+  + N +++   K GK+++AS 
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+C + PN  +Y  L+DG    GK++    L   ME MGC  +  SYN +ING  
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     EA  + +++  +G+ P V+TY TL  GL    + + A K+F +M+      +  
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 369 TYRTFIDGLC 378
           TY + I GLC
Sbjct: 620 TYSSLIYGLC 629



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 185/364 (50%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S N LL  LAK +  +   +L+K++ + G+ P L T++ LIN   K G+V    +I  +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +   +P+V T+TSLI G C    +  A  +F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL++ +EM     E G+  +P   TY++ I  LC     ++A EL  +MK     PNV
Sbjct: 285 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G         A GL  +M+ +G+ PN V+ N ++NELC  G+   A ++   
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M       N  TYN ++ G CL G I +   LF  M  MG      +YN LINGY     
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V  A  L + +   G +P   TYN L  G  +  + E A   F EM    +  +  +Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 373 FIDG 376
            IDG
Sbjct: 519 LIDG 522



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 177/369 (47%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L++    +  + L+ ++   GL P+  TY+ LIN  C  G+ S    I
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N  T+  +IKGLC    I +A  LF K+   G  P V+TYNTLING   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L   M     E      P+  TY+ ++ G  K G ++ A   F +M    L
Sbjct: 456 KGNVNNAARLLDLMKENGCE------PDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPN V+YT+LI G       + A  LL  M + G  PNV S N ++N L K  +   A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV+  + PN  TY TL+DG C  G+     ++F  ME   C  + ++Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  + +EA  L  E+  KG+ P  VT+ +L  G   + + + A  L   M       +  
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 369 TYRTFIDGL 377
           TY   + GL
Sbjct: 690 TYSVLLKGL 698



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 10  PVSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P     IL+    +N+     V      ++ +G    LY+ + L+    K   V     +
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++L S   P+++TF +LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +  +A  +F  M     +      PN+VTYS +I+GLC EG VD+A ++  +M  + +
Sbjct: 246 NRNLDLAFGVFDRMVKEGCD------PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TYT  I   C      EA  L+  M  +G +PNV +   +++ L + GK++ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  + PN  TYN L++  C+ G+ +   ++F  ME  G   +  +YN +I G C
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++E+A+ L+ ++   G  PTVVTYNTL +G         A +L   M+ N    D  
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479

Query: 369 TYRTFIDG 376
           TY   + G
Sbjct: 480 TYNELVSG 487



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 166/328 (50%), Gaps = 16/328 (4%)

Query: 53  INCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +NCF  M           R++R   FAP       +IK    E  I   A    ++   G
Sbjct: 108 MNCFISM---------LNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMG 158

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
              ++ + NTL+  L +      A NL+K+M N         +P+ +T++ +I+ L K+G
Sbjct: 159 FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKG 212

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            V +A+ +  Q+   +L+P+V TYTSLI G C   + + A G+   MV +G  PN V+ +
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++N LC  G++D A  +L+ M++  + P  +TY   +   C         EL   M+  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC+ +  +Y  LI+G  +  ++E A+ LY+++  +G+ P  VTYN L + L    +   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           LK+F  M+G+   A+T TY   I GLC+
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCL 420



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 29/330 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     + T L +F  +   G   +  TY+ +I   C  G +    V+
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P VVT+ +LI G   +  +  AA L   +K  GCEP+  TYN L++G  +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 129 TGHTIVALNLFKEMT------------------NGNGEIGVVFK-----------PNTVT 159
            G    A   F+EM                   + +G++ +              PN  +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I+GL KE    +A+++  +M  + L PNV+TYT+LI G C       A  +  +M 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +   PN+ + + ++  LC+ GK D A  LL  M +  + P+  T+ +L+DGF + G+I+
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCK 309
               L   M  MGCK +  +Y++L+ G  K
Sbjct: 671 HAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 6/169 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L+K   +     +  ++   GL P++ TY+ LI+  C+ G+    F I
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +    PN+ T++SLI GLC E +  EA  L  +++  G  P+ +T+ +LI+G   
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 665

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            G    A  L + M     ++G   KPN  TYS+++ GL KE  + + K
Sbjct: 666 LGRIDHAFLLLRRMV----DMGC--KPNYRTYSVLLKGLQKECLLLEEK 708



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L +    D    L K +   GL PD  T++ LI+ F  +G++   F++
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 675

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF--GCEP 114
             R++     PN  T++ L+KGL  E  ++E   +F  +  +  GC P
Sbjct: 676 LRRMVDMGCKPNYRTYSVLLKGLQKECLLLE-EKIFPLVDNYFLGCNP 722


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 207/446 (46%), Gaps = 79/446 (17%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP   + + L+  L K + YD V+S++ ++ S  + P   + S L   F      S  F
Sbjct: 38  SPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAF 97

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-FGCE-PNVITYNTLIN 124
            +   + +  F  NV     ++KG C   +  +A +LF+++K  + C  P+ +TYNTL+N
Sbjct: 98  SVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVN 157

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK--------------- 169
           G C+      A  LF+ M  G        +PN VTYS++ID  CK               
Sbjct: 158 GFCKAKRLAEARVLFEAMKKGGD-----CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEME 212

Query: 170 --------------------EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                               EG ++  +ELF +M    ++PNVVTY+ L+ G      W 
Sbjct: 213 REGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWR 272

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------------- 255
           EA  +L +M  +GV+P+VV+  V+ + LCKNG+  +A ++LDLMVQ              
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVV 332

Query: 256 ---CD------------------VRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMG 292
              C                    +P+A TYNTL+ G C  GKI+   +L+  +  E   
Sbjct: 333 NGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFH 392

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K D F+ N LI G CK   V +A  +++ +   G++  +VTYN L  G    R+   AL
Sbjct: 393 VKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL 452

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
           KL+     +  + ++ TY   I+GLC
Sbjct: 453 KLWKYAVESGFSPNSMTYSVMINGLC 478



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L   L KN      + +   +   G  P   TY++++N  CK  ++   F +
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGL 126
              +++    P+ VT+ +L+KGLC   +I EA  L+  L  + F  +P+V T N LI GL
Sbjct: 348 VEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  +   M     E+G   + N VTY+ +I+G      + +A +L+      
Sbjct: 408 CKEGRVHDAARIHSSMV----EMG--LQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN +TY+ +I+G C     + A+GL  +M D G++P V+  N +M  LC+   ++ A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M   +   +  ++N ++DG    G +   KEL   M  M    D  +++ILIN 
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + K   ++EA+ LY ++   G  P VV +++L  G     + E+ + L  +M   DV  D
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLD 641

Query: 367 TCTYRTFIDGLC 378
           +    T +  LC
Sbjct: 642 SKLTSTILACLC 653



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 11  VSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           + ++N L+ G LA  K  +  L L+K     G  P+  TYS++IN  CKM  +S+   +F
Sbjct: 432 IVTYNFLIEGYLAARKLIEA-LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF 490

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
            ++  S   P V+ + +L+  LC E  + +A +LF +++      +V+++N +I+G  + 
Sbjct: 491 CKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKA 550

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    A  L  EM        +   P+ VT+SI+I+   K G +D+A  L+ +M      
Sbjct: 551 GDVKSAKELLSEM------FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHV 604

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P VV + SL+ G+    +  +   LL +M D+ V  +   ++ I+  LC   +  +  ++
Sbjct: 605 PGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKI 664

Query: 250 L 250
           L
Sbjct: 665 L 665


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 187/372 (50%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++  L K    D  +  F+ +      PD++TYS L+N  CK  +V     +
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VTF  LI  L     +  AA L   +   GC PN +TYNTLI+GLC 
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L ++M +          PN VTY  II+GL K+   +    + + M+    
Sbjct: 316 KGKLDKALSLLEKMVSSKC------VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   Y+SLI G         A  L  EM ++G +PNVV     ++ LC++ K D A  
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M+     PNAFTY++LM GF   G   +   ++  M S   +H+    ++L+NG C
Sbjct: 430 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--D 366
           ++  + EAL+++  +  +G+KP VV Y+++  GL ++   ++ LKLF EMQ  +  +  D
Sbjct: 490 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 549

Query: 367 TCTYRTFIDGLC 378
             TY    + LC
Sbjct: 550 VVTYNILFNALC 561



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 8/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K +  D  + L   + + G  P+  T+++LI+   K G +S    +
Sbjct: 231 PDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL 290

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT+ +LI GLC + ++ +A +L  K+ +  C PN +TY T+INGL +
Sbjct: 291 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVK 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +++   M    G+     K N   YS +I GL KEG  + A  L+ +M  +  
Sbjct: 351 QRRAEDGVHILMSMEE-RGQ-----KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y + I G C     +EA+ +L EM+ +G  PN  + + +M    K G    A  
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+  D+R N    + L++G C +G++     ++  M   G K D  +Y+ +I G C
Sbjct: 465 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 524

Query: 309 KNKEVEEALSLYNELPFKGIK--PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
               V++ L L+ E+  +  K  P VVTYN LF+ L       RA+ L   M       D
Sbjct: 525 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 584

Query: 367 TCTYRTFIDGLCVR 380
           + T   F++ L  R
Sbjct: 585 SLTCNIFLETLRER 598



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 160/294 (54%), Gaps = 5/294 (1%)

Query: 87  LIKGLCAESRIV-EAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           LI   C ++ +  EA   F ++     C+  V ++N+++N + + G    A   +  +  
Sbjct: 129 LIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG 188

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            N +    F+PN +TY++II  LCK G +D+A + F +M  +N NP+V TY++L++G C 
Sbjct: 189 ANSK---GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 245

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
               +EA  LL EM  +G  PN V+ NV+++ L KNG +  A++L+D M      PN  T
Sbjct: 246 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 305

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YNTL+ G CL GK+++   L   M S  C  +  +Y  +ING  K +  E+ + +   + 
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 365

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G K     Y++L  GLF+  ++E A++L+ EM       +   Y  FIDGLC
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 419



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 182/352 (51%), Gaps = 9/352 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+ FN+L+  L+KN        L   +   G  P+  TY+ LI+  C  G++     
Sbjct: 266 PNPVT-FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 324

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++ S   PN VT+ ++I GL  + R  +   +   ++  G + N   Y++LI+GL 
Sbjct: 325 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 384

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G +  A+ L+KEM     E G   KPN V Y   IDGLC++   D+A+++  +M  + 
Sbjct: 385 KEGKSENAVRLWKEM----AEKGC--KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN  TY+SL+ GF    D  +A  +  EM+ Q ++ NVV  +V++N LC++G++  A 
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH--DDFSYNILIN 305
            +   M+   ++P+   Y++++ G C  G +++  +LF  M+    K   D  +YNIL N
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 558

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             C+   +  A+ L N +  +G  P  +T N     L E     +  +LF++
Sbjct: 559 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 610



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 171/340 (50%), Gaps = 9/340 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           +++ ++N   + G  S  F  +  +       F PN++T+  +IK LC   +I  A   F
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++    C P+V TY+TL+NGLC+      A+ L  EM    G +     PN VT++++I
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM-QAEGCL-----PNPVTFNVLI 275

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           D L K G + +A +L   M  +   PN VTY +LIHG C     ++A  LL +MV     
Sbjct: 276 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   I+N L K  + ++   +L  M +   + N + Y++L+ G    GK      L
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M   GCK +   Y   I+G C++++ +EA  +  E+  KG  P   TY++L  G F+
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              +++A+ ++ EM   D+  +       ++GLC   ++R
Sbjct: 456 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 194/370 (52%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + LL  L K +H+   + LF  + S+G+ PD+Y Y+ +I   C++  +S    +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +    N+V +  LI GLC + ++ EA  +   L     +P+V+TY TL+ GLC+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                + L +  EM      + + F P+    S +++GL K G +++A  L  ++    +
Sbjct: 310 VQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN+  Y +LI   C    ++EA+ L   M   G++PN V+ +++++  C+ GK+D A  
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  MV   ++ + + YN+L++G C  G I+  +     M +   +    +Y  L+ GYC
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++ +AL LY+E+  KGI P++ T+ TL  GLF       A+KLF EM   +V  +  
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 544 TYNVMIEGYC 553



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 188/370 (50%), Gaps = 10/370 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  +N+L+  L K +     + + K L    L PD+ TY  L+   CK+ +  +G  +  
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L   F+P+    +SL++GL    +I EA  L  ++  FG  PN+  YN LI+ LC+  
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF  M    G+IG+  +PN VTYSI+ID  C+ G +D A     +M    L  
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V  Y SLI+G C   D + A+G + EM+++ ++P VV+   +M   C  GK++ A RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+ +T+ TL+ G    G I    +LF  M     K +  +YN++I GYC+ 
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTC 368
            ++ +A     E+  KGI P   +Y  L HGL    QA  A K+FV+   +GN    + C
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC 614

Query: 369 TYRTFIDGLC 378
            Y   + G C
Sbjct: 615 -YTGLLHGFC 623



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 185/371 (49%), Gaps = 9/371 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PS   VSS   L+  L K    +  L+L KR+   G+ P+L+ Y+ LI+  CK  +    
Sbjct: 330 PSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++F R+ +    PN VT++ LI   C   ++  A +   ++   G + +V  YN+LING
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A     EM N         +P  VTY+ ++ G C +G ++KA  L+ +M  
Sbjct: 447 HCKFGDISAAEGFMAEMINKK------LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P++ T+T+L+ G   A    +A  L  EM +  V+PN V+ NV++   C+ G M  
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A   L  M +  + P+ ++Y  L+ G CLTG+ +  K     +    C+ ++  Y  L++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C+  ++EEALS+  E+  +G+   +V Y  L  G  + +  +    L  EM    +  
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680

Query: 366 DTCTYRTFIDG 376
           D   Y + ID 
Sbjct: 681 DDVIYTSMIDA 691



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 177/370 (47%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L K + +     LF R+  IGL P+  TYSILI+ FC+ G++      
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++ +    +V  + SLI G C    I  A     ++     EP V+TY +L+ G C 
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L+ EMT G G       P+  T++ ++ GL + G +  A +LF +M   N+
Sbjct: 485 KGKINKALRLYHEMT-GKG-----IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY  +I G+C   D ++A   L EM ++G+ P+  S   +++ LC  G+   A  
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +D + + +   N   Y  L+ GFC  GK+     +   M   G   D   Y +LI+G  
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K+ +    L  E+  +G+KP  V Y ++     +    + A  ++  M       +  
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 719 TYTAVINGLC 728



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 195/447 (43%), Gaps = 78/447 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL+    +    DT LS    +   GL   +Y Y+ LIN  CK G +S     
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P VVT+TSL+ G C++ +I +A  L+ ++   G  P++ T+ TL++GL R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF EM   N       KPN VTY+++I+G C+EG + KA E   +M  + +
Sbjct: 520 AGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573

Query: 189 NP-----------------------------------NVVTYTSLIHGFCHANDWNEAK- 212
            P                                   N + YT L+HGFC      EA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 213 ----------------------------------GLLIEMVDQGVQPNVVSSNVIMNELC 238
                                             GLL EM D+G++P+ V    +++   
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G    A  + DLM+     PN  TY  +++G C  G +N  + L   M+ +    +  
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753

Query: 299 SYNILINGYCKNK-EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           +Y   ++   K + ++++A+ L+N +  KG+     TYN L  G     + E A +L   
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITR 812

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           M G+ V+ D  TY T I+ LC R  V+
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVK 839



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 179/403 (44%), Gaps = 49/403 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  LL  L +       + LF  +    + P+  TY+++I  +C+ G +S  F  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  ++  LI GLC   +  EA      L    CE N I Y  L++G CR
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL----QMK 184
            G    AL++ +EM     ++      + V Y ++IDG  K     K ++LF     +M 
Sbjct: 625 EGKLEEALSVCQEMVQRGVDL------DLVCYGVLIDGSLKH----KDRKLFFGLLKEMH 674

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              L P+ V YTS+I       D+ EA G+   M+++G  PN V+   ++N LCK G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 245 NASRL-------------------LDLMVQCDVR----------------PNAFTYNTLM 269
            A  L                   LD++ + +V                  N  TYN L+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            GFC  G+I    EL   M   G   D  +Y  +IN  C+  +V++A+ L+N +  KGI+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           P  V YNTL HG     +  +A +L  EM    +  +  T RT
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 7/296 (2%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           F  LI+      R+++   +F  +       P V T + L++GL +  H  +A+ LF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                 + V  +P+   Y+ +I  LC+   + +AKE+   M+    + N+V Y  LI G 
Sbjct: 219 ------VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C      EA G+  ++  + ++P+VV+   ++  LCK  + +    ++D M+     P+ 
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
              ++L++G    GKI     L   +   G   + F YN LI+  CK ++  EA  L++ 
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   G++P  VTY+ L        + + AL    EM    +      Y + I+G C
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 5/265 (1%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           ++ LI    R+   +  + +FK M        V   P   T S ++ GL K      A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITK-----VSLLPEVRTLSALLHGLVKFRHFGLAME 213

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF  M    + P+V  YT +I   C   D + AK ++  M   G   N+V  NV+++ LC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K+  A  +   +   D++P+  TY TL+ G C   +     E+   M  +     + 
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           + + L+ G  K  ++EEAL+L   +   G+ P +  YN L   L + R+   A  LF  M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
               +  +  TY   ID  C R ++
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKL 418


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ LL  L++      V+  + R+ S G+ P+L  Y+ +IN  CK G V+    I  ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S  +P+  T+TS+I G C +  +  A  +F ++   GCEPN +TY+TLINGLC +G  
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L +EM       G++   +T T  II   LC  G  + A  LF+ MK +   PNV
Sbjct: 302 NEAFDLIREMILH----GILPTAHTCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNV 355

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G C +     A GL   M   GV PN V+ N ++N L +N ++  A  +L+L
Sbjct: 356 YTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    PN  TYN ++ G+C+ G   +   +  +M   G   +  +YN +I GYC +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
              AL + + +   G KP   +Y  L  G  +I + E A  LF EM  + +  +  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 373 FIDGLC 378
            IDG C
Sbjct: 536 LIDGYC 541



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 189/372 (50%), Gaps = 7/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  +++LG   K+   D+ L +F ++   G  P+  TYS LIN  C  G+V+  F
Sbjct: 247 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P   T T  I  LC      +A  LF  +K  GCEPNV TY  LI+GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C +G   VA+ LF  M+        VF PNTVTY+ +I+ L +   +  A  +   M   
Sbjct: 366 CVSGILKVAIGLFHRMSRDG-----VF-PNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN+VTY  +I G+C   D  +A  ++  M+ +G   N+V+ N I+   C +G   +A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+LDLM     +P+ ++Y  L+ GFC   K+     LF  M   G   ++ +Y  LI+G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YCK+++++ A SL   +   G +P V TYN L HGL +      A +L   M    +  +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 367 TCTYRTFIDGLC 378
             TY   IDGLC
Sbjct: 600 VVTYTAMIDGLC 611



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +      + LF R++  G+FP+  TY+ LIN   +  ++   FV+
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+  +PN+VT+  +IKG C      +A  +   +   G   N++TYNT+I G C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+T  AL +   M +G        KP+  +Y+ +I G CK   ++ A  LF +M  + L
Sbjct: 473 SGNTTSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTYT+LI G+C     + A  LL  M   G +PNV + NV+++ L K      A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M++  + PN  TY  ++DG C  G  +   E+F  M   GC  +  +Y+ LI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +VEEA +L+ EL   G+ P  +TY  +        + E A      M          
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 707 TYGVLIKGL 715



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 175/361 (48%), Gaps = 6/361 (1%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           Y+    LF  + + G  P++YTY+ LI+  C  G + +   +F R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI  L    RI  A  +   +   GC PN++TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                    N VTY+ II G C  G    A  +   M+     P+  +YT LI GFC  +
Sbjct: 456 ------HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A GL  EMVD G+ PN V+   +++  CK+ K+D A+ LL+ M +   RPN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G       +  +EL   M   G   +  +Y  +I+G CKN     AL ++N++  +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G  P ++TY++L   L +  + E A  LF E++ + +  D  TY   I+   +  +V   
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 387 Y 387
           +
Sbjct: 690 F 690



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LIK   ++  +    +    L   G    +  Y+ L+  L R G T   ++ +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                  +PN + Y+ +I+ LCK+G V  A+ +  ++    ++P+  TYTS+I G C  +
Sbjct: 211 ------VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D + A  +  +M  +G +PN V+ + ++N LC +G+++ A  L+  M+   + P A T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             +   C  G       LFV M++ GC+ + ++Y  LI+G C +  ++ A+ L++ +   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD 384

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           G+ P  VTYN L + L E R+ + A  +   M  N  + +  TY   I G C+
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 168/426 (39%), Gaps = 100/426 (23%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++     + +  + L +   +   G  PD ++Y+ LI  FCK+ ++   F +F  +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI--------- 123
           +     PN VT+T+LI G C + ++  A +L   +K  GC PNV TYN LI         
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 124 --------------------------NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                                     +GLC+ G T +AL +F +M     E G +  PN 
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQGCL--PNL 635

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI----------HGF----- 202
           +TYS +I  L +EG V++A+ LF +++   L P+ +TY  +I          H F     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 203 -----CHANDWNEA---KGLLIE--MVDQ--GVQPNVVS--------------------- 229
                C    W      KGL  E  + DQ     P+VV                      
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 230 -----------SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                       N +++ L   G+   A+ LL  M+   + P+   YN+L+        +
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    +F  M + GC+     Y  LI   C+    +EA   +  +  +   P  V    L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875

Query: 339 FHGLFE 344
             GL  
Sbjct: 876 IDGLLR 881



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 135/345 (39%), Gaps = 55/345 (15%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           + HM  S   P V ++N+L+  L K  ++     L K +   G+FP++ TY+ +I+  CK
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G  SL   +F +++     PN++T++SLI+ L  E ++ EA  LF +L+  G  P+ IT
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGE-----IGVVFK----------------PNT 157
           Y  +I     +G    A N    M     +      GV+ K                P+ 
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732

Query: 158 V--------------------------------TYSIIIDGLCKEGFVDKAKELFLQMKY 185
           V                                  + ++  L   G   +A EL   M  
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L P+   Y SL+       + + A G+   M  QG + ++     ++  LC+  +   
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           A    + M+     P+      L+DG    G  +   E    ME+
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 187/372 (50%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++  L K    D  +  F+ +      PD++TYS L+N  CK  +V     +
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VTF  LI  L     +  AA L   +   GC PN +TYNTLI+GLC 
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L ++M +          PN VTY  II+GL K+   +    + + M+    
Sbjct: 292 KGKLDKALSLLEKMVSSKC------VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N   Y+SLI G         A  L  EM ++G +PNVV     ++ LC++ K D A  
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 405

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M+     PNAFTY++LM GF   G   +   ++  M S   +H+    ++L+NG C
Sbjct: 406 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 465

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--D 366
           ++  + EAL+++  +  +G+KP VV Y+++  GL ++   ++ LKLF EMQ  +  +  D
Sbjct: 466 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 525

Query: 367 TCTYRTFIDGLC 378
             TY    + LC
Sbjct: 526 VVTYNILFNALC 537



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 8/374 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  L K +  D  + L   + + G  P+  T+++LI+   K G +S    +
Sbjct: 207 PDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT+ +LI GLC + ++ +A +L  K+ +  C PN +TY T+INGL +
Sbjct: 267 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVK 326

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +++   M    G+     K N   YS +I GL KEG  + A  L+ +M  +  
Sbjct: 327 QRRAEDGVHILMSMEE-RGQ-----KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y + I G C     +EA+ +L EM+ +G  PN  + + +M    K G    A  
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 440

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+  D+R N    + L++G C +G++     ++  M   G K D  +Y+ +I G C
Sbjct: 441 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 500

Query: 309 KNKEVEEALSLYNELPFKGIK--PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
               V++ L L+ E+  +  K  P VVTYN LF+ L       RA+ L   M       D
Sbjct: 501 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 560

Query: 367 TCTYRTFIDGLCVR 380
           + T   F++ L  R
Sbjct: 561 SLTCNIFLETLRER 574



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 160/294 (54%), Gaps = 5/294 (1%)

Query: 87  LIKGLCAESRIV-EAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           LI   C ++ +  EA   F ++     C+  V ++N+++N + + G    A   +  +  
Sbjct: 105 LIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG 164

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            N +    F+PN +TY++II  LCK G +D+A + F +M  +N NP+V TY++L++G C 
Sbjct: 165 ANSK---GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 221

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
               +EA  LL EM  +G  PN V+ NV+++ L KNG +  A++L+D M      PN  T
Sbjct: 222 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 281

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YNTL+ G CL GK+++   L   M S  C  +  +Y  +ING  K +  E+ + +   + 
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 341

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G K     Y++L  GLF+  ++E A++L+ EM       +   Y  FIDGLC
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 395



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 182/352 (51%), Gaps = 9/352 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+ FN+L+  L+KN        L   +   G  P+  TY+ LI+  C  G++     
Sbjct: 242 PNPVT-FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 300

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +++ S   PN VT+ ++I GL  + R  +   +   ++  G + N   Y++LI+GL 
Sbjct: 301 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 360

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G +  A+ L+KEM     E G   KPN V Y   IDGLC++   D+A+++  +M  + 
Sbjct: 361 KEGKSENAVRLWKEM----AEKGC--KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN  TY+SL+ GF    D  +A  +  EM+ Q ++ NVV  +V++N LC++G++  A 
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH--DDFSYNILIN 305
            +   M+   ++P+   Y++++ G C  G +++  +LF  M+    K   D  +YNIL N
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 534

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             C+   +  A+ L N +  +G  P  +T N     L E     +  +LF++
Sbjct: 535 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 586



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 171/340 (50%), Gaps = 9/340 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           +++ ++N   + G  S  F  +  +       F PN++T+  +IK LC   +I  A   F
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++    C P+V TY+TL+NGLC+      A+ L  EM    G +     PN VT++++I
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM-QAEGCL-----PNPVTFNVLI 251

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           D L K G + +A +L   M  +   PN VTY +LIHG C     ++A  LL +MV     
Sbjct: 252 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   I+N L K  + ++   +L  M +   + N + Y++L+ G    GK      L
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M   GCK +   Y   I+G C++++ +EA  +  E+  KG  P   TY++L  G F+
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              +++A+ ++ EM   D+  +       ++GLC   ++R
Sbjct: 432 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ LL  L++      V+  + R+ S G+ P+L  Y+ +IN  CK G V+    I  ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S  +P+  T+TS+I G C +  +  A  +F ++   GCEPN +TY+TLINGLC +G  
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L +EM       G++   +T T  II   LC  G  + A  LF+ MK +   PNV
Sbjct: 302 NEAFDLIREMILH----GILPTAHTCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNV 355

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G C +     A GL   M   GV PN V+ N ++N L +N ++  A  +L+L
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    PN  TYN ++ G+C+ G   +   +  +M   G   +  +YN +I GYC +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
              AL + + +   G KP   +Y  L  G  +I + E A  LF EM  + +  +  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 373 FIDGLC 378
            IDG C
Sbjct: 536 LIDGYC 541



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 189/372 (50%), Gaps = 7/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  +++LG   K+   D+ L +F ++   G  P+  TYS LIN  C  G+V+  F
Sbjct: 247 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P   T T  I  LC      +A  LF  +K  GCEPNV TY  LI+GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C +G   VA+ LF  M+        VF PNTVTY+ +I+ L +   +  A  +   M   
Sbjct: 366 CVSGLLKVAIGLFHRMSRDG-----VF-PNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN+VTY  +I G+C   D  +A  ++  M+ +G   N+V+ N I+   C +G   +A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+LDLM     +P+ ++Y  L+ GFC   K+     LF  M   G   ++ +Y  LI+G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YCK+++++ A SL   +   G +P V TYN L HGL +      A +L   M    +  +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 367 TCTYRTFIDGLC 378
             TY   IDGLC
Sbjct: 600 VVTYTAMIDGLC 611



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +      + LF R++  G+FP+  TY+ LIN   +  ++   FV+
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+  +PN+VT+  +IKG C      +A  +   +   G   N++TYNT+I G C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+T  AL +   M +G        KP+  +Y+ +I G CK   ++ A  LF +M  + L
Sbjct: 473 SGNTTSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTYT+LI G+C     + A  LL  M   G +PNV + NV+++ L K      A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M++  + PN  TY  ++DG C  G  +   E+F  M   GC  +  +Y+ LI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +VEEA +L+ EL   G+ P  +TY  +        + E A      M          
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 707 TYGVLIKGL 715



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 175/361 (48%), Gaps = 6/361 (1%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           Y+    LF  + + G  P++YTY+ LI+  C  G + +   +F R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI  L    RI  A  +   +   GC PN++TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                    N VTY+ II G C  G    A  +   M+     P+  +YT LI GFC  +
Sbjct: 456 ------HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A GL  EMVD G+ PN V+   +++  CK+ K+D A+ LL+ M +   RPN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G       +  +EL   M   G   +  +Y  +I+G CKN     AL ++N++  +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G  P ++TY++L   L +  + E A  LF E++ + +  D  TY   I+   +  +V   
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 387 Y 387
           +
Sbjct: 690 F 690



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LIK   ++  +    +    L   G    +  Y+ L+  L R G T   ++ +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                  +PN + Y+ +I+ LCK+G V  A+ +  ++    ++P+  TYTS+I G C  +
Sbjct: 211 ------VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D + A  +  +M  +G +PN V+ + ++N LC +G+++ A  L+  M+   + P A T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             +   C  G       LFV M++ GC+ + ++Y  LI+G C +  ++ A+ L++ +   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           G+ P  VTYN L + L E R+ + A  +   M  N  + +  TY   I G C+
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 168/426 (39%), Gaps = 100/426 (23%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++     + +  + L +   +   G  PD ++Y+ LI  FCK+ ++   F +F  +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI--------- 123
           +     PN VT+T+LI G C + ++  A +L   +K  GC PNV TYN LI         
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 124 --------------------------NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                                     +GLC+ G T +AL +F +M     E G +  PN 
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQGCL--PNL 635

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI----------HGF----- 202
           +TYS +I  L +EG V++A+ LF +++   L P+ +TY  +I          H F     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 203 -----CHANDWNEA---KGLLIE--MVDQ--GVQPNVVS--------------------- 229
                C    W      KGL  E  + DQ     P+VV                      
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 230 -----------SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                       N +++ L   G+   A+ LL  M+   + P+   YN+L+        +
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    +F  M + GC+     Y  LI   C+    +EA   +  +  +   P  V    L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875

Query: 339 FHGLFE 344
             GL  
Sbjct: 876 IDGLLR 881



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 135/345 (39%), Gaps = 55/345 (15%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           + HM  S   P V ++N+L+  L K  ++     L K +   G+FP++ TY+ +I+  CK
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G  SL   +F +++     PN++T++SLI+ L  E ++ EA  LF +L+  G  P+ IT
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGE-----IGVVFK----------------PNT 157
           Y  +I     +G    A N    M     +      GV+ K                P+ 
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732

Query: 158 V--------------------------------TYSIIIDGLCKEGFVDKAKELFLQMKY 185
           V                                  + ++  L   G   +A EL   M  
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L P+   Y SL+       + + A G+   M  QG + ++     ++  LC+  +   
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           A    + M+     P+      L+DG    G  +   E    ME+
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 180/365 (49%), Gaps = 29/365 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  +     F  + ++GL PD+ TY+ L+N +CK G +     +
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G + R+  AP V+T+ +LI G C    + EA  L  ++   GC P+V TY  L+NG  +
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
             +  +A   F EM +                        + F+           P+TVT
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++IIDGLCK G +  AK L  +M  + L P+ +TYT LIH  C      EA+ LL  MV
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+QP+VV+  ++++  C+ G + +A      M+   + PN  TYN L+   C+TG+  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                F  M   G   + ++Y +LI+G C+     +A+ LY E+   GI P   T+N LF
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700

Query: 340 HGLFE 344
            G  E
Sbjct: 701 KGFDE 705



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 9/350 (2%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L+ F+ +   G+ PD+   + ++       +      ++G +L+    P +VT+ +L+  
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 91  LCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
              E R  EA+ L  ++  +  G   N +T+N +I+ L R GH   A+ L   M      
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-- 304

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                K ++ TY+ +I  L + GFV KA+ L ++M+ E + P VVTY ++IHG       
Sbjct: 305 -----KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQA 359

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A+    EM   G+ P+V++ N ++N  CK G +  A  LL  + +  + P   TYNTL
Sbjct: 360 EAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 419

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  G +   + L   M   GC  D  +Y IL+NG  K + +  A   ++E+  KG+
Sbjct: 420 IDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGL 479

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +P    YNT       +     A +L   M    +  DT TY   IDGLC
Sbjct: 480 QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLC 529



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L +        +L   + + G+ P + TY+ +I+   K  Q     V F  +
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P+V+T+ SL+   C    + EA  L   L+  G  P V+TYNTLI+G CR G  
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDL 429

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L +EM     E G    P+  TY+I+++G  K   +  A+E F +M  + L P+ 
Sbjct: 430 AEARRLKEEMV----EQGCF--PDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDC 483

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y + I      +    A  L   M+ +G+ P+ V+ NVI++ LCK G + +A RL   
Sbjct: 484 FAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTK 543

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV   ++P+  TY  L+   C  G +   ++L   M S G +    +Y IL++  C+   
Sbjct: 544 MVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGN 603

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A   + ++   GI+P  +TYN L H L    +   A + F EM    +A +  TY  
Sbjct: 604 LYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTL 663

Query: 373 FIDGLC 378
            IDG C
Sbjct: 664 LIDGNC 669



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 15/384 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDL--YTYSILINCFCKMGQVSLGF 66
           P + ++N LL    K    D    L K + + G    L   T++++I+   + G +    
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +    +R     +  T+  LI  L     + +A AL  +++  G  P V+TYN +I+GL
Sbjct: 295 KLVDS-MRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGL 353

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            +      A   F EM      +G++  P+ +TY+ +++  CK G + +A  L   ++  
Sbjct: 354 LKCEQAEAAQVKFAEMR----AMGLL--PDVITYNSLLNRYCKAGNLKEALWLLGDLRRA 407

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P V+TY +LI G+C   D  EA+ L  EMV+QG  P+V +  ++MN   K   +  A
Sbjct: 408 GLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMA 467

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNIL 303
               D M+   ++P+ F YNT +   C    ++     F   E M   G   D  +YN++
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRI---CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK   +++A  L  ++   G++P  +TY  L H   E      A KL   M  + +
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584

Query: 364 AADTCTYRTFIDGLCVRPQVRFTY 387
                TY   +   C R  +   Y
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAY 608


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 196/370 (52%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ L+   A     +    L   ++  G+ PD++ Y+ +I+C  K G++      
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      P+ VTF + I G     ++ EAA  F ++   G  PN   Y  LING  +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ + AL++F+ +      +GV+  P+  T S  I GL K G V +A ++F ++K + L
Sbjct: 303 AGNLMEALSIFRHLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY+SLI GFC   +  +A  L  EM  +G+ PN+   N +++ LCK+G +  A +
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M +  + P++ TY+T++DG+C +  +     LF  M S G +   F YN L++G C
Sbjct: 417 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 476

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++E+A++L+ E+  KG   T +++NTL  G  +  + + A +LF EM    +  D  
Sbjct: 477 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535

Query: 369 TYRTFIDGLC 378
           TY T ID  C
Sbjct: 536 TYTTVIDWHC 545



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 191/376 (50%), Gaps = 7/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  ++  L   K       L +++   GL P++  YS LI  +   G++     +
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  AP++  + ++I  L    ++ EA+    +++  G +P+ +T+   I G  +
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A   F EM +          PN   Y+++I+G  K G + +A  +F  +    +
Sbjct: 268 TGKMTEAAKYFDEMLDHG------LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T ++ IHG        EA  +  E+ ++G+ P+V + + +++  CK G+++ A  
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    + PN F YN L+DG C +G I R ++LF  M   G + D  +Y+ +I+GYC
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ V EA SL++E+P KG++P    YN L HG  +    E+A+ LF EM     A  T 
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TL 500

Query: 369 TYRTFIDGLCVRPQVR 384
           ++ T IDG C   +++
Sbjct: 501 SFNTLIDGYCKSCKIQ 516



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 8/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +     I
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67

Query: 69  FGRILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              ++ SC  P N++T+  LI GLC   ++ +AA +   +   GC+PN  T+  LI G C
Sbjct: 68  -KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R  +   AL L  EM   N        P+ V+Y  +I+GLC    +  A +L  +M +  
Sbjct: 127 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNVV Y++LI G+       EA+ LL  M   GV P++   N I++ L K GKM+ AS
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  +    ++P+A T+   + G+  TGK+    + F  M   G   ++  Y +LING+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   + EALS++  L   G+ P V T +   HGL +  + + ALK+F E++   +  D 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            TY + I G C + +V   +
Sbjct: 361 FTYSSLISGFCKQGEVEKAF 380



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 184/359 (51%), Gaps = 7/359 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N ++ CL+K    +   +    +   GL PD  T+   I  + K G+++     
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     PN   +T LI G      ++EA ++F  L A G  P+V T +  I+GL +
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +F E+     E G+V  P+  TYS +I G CK+G V+KA EL  +M  + +
Sbjct: 338 NGRVQEALKVFSELK----EKGLV--PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+  Y +L+ G C + D   A+ L   M ++G++P+ V+ + +++  CK+  +  A  
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    V+P++F YN L+ G C  G + +   LF  M   G      S+N LI+GYC
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYC 510

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K+ +++EA  L+ E+  K I P  VTY T+     +  + E A  LF EMQ  ++  DT
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 569



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 184/392 (46%), Gaps = 24/392 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F   +   +K          F  +   GL P+   Y++LIN   K G +     I
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 312

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+V T ++ I GL    R+ EA  +F++LK  G  P+V TY++LI+G C+
Sbjct: 313 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 372

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM            PN   Y+ ++DGLCK G + +A++LF  M  + L
Sbjct: 373 QGEVEKAFELHDEMCLKG------IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY+++I G+C + +  EA  L  EM  +GVQP+    N +++  CK G M+ A  
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+Q        ++NTL+DG+C + KI    +LF  M +     D  +Y  +I+ +C
Sbjct: 487 LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545

Query: 309 KNKEVEEA-----------------LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           K  ++EEA                  +L+ ++  KG+KP  VTY  + +   +      A
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            KL  E+ G  +      +   I  LC R  +
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDL 637



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 26/394 (6%)

Query: 2   RHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           RH+H     P V + +  +  L KN      L +F  L   GL PD++TYS LI+ FCK 
Sbjct: 314 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 373

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G+V   F +   +     APN+  + +L+ GLC    I  A  LF  +   G EP+ +TY
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           +T+I+G C++ +   A +LF EM +         +P++  Y+ ++ G CKEG ++KA  L
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKG------VQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +M  +      +++ +LI G+C +    EA  L  EM+ + + P+ V+   +++  CK
Sbjct: 488 FREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 240 NGKMDNAS-----------------RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            GKM+ A+                  L + MV   V+P+  TY  ++   C    +    
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +L   +   G       +++LI   CK +++ EA  L +E+   G+KP++   +TL    
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            E  + + A ++F  ++   +  DT T    ++G
Sbjct: 667 HEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 174/346 (50%), Gaps = 24/346 (6%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LS+F+ L+++G+ PD+ T S  I+   K G+V     +F  +      P+V T++SLI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C +  + +A  L  ++   G  PN+  YN L++GLC++G    A  LF    +G  E 
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF----DGMPEK 424

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+  +P++VTYS +IDG CK   V +A  LF +M  + + P+   Y +L+HG C   D  
Sbjct: 425 GL--EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 482

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  L  EM+ +G     +S N +++  CK+ K+  AS+L   M+   + P+  TY T++
Sbjct: 483 KAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541

Query: 270 DGFCLTGKINRVKELFVSME-----------------SMGCKHDDFSYNILINGYCKNKE 312
           D  C  GK+     LF  M+                 + G K D+ +Y ++I  +CK   
Sbjct: 542 DWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 601

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           + EA  L +E+  KG+      ++ L   L +      A KL  EM
Sbjct: 602 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 6/381 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++N+L+  L K    +    + K + ++G  P+  T+ +LI  +C+   +     
Sbjct: 77  PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 136

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +    P+ V++ ++I GLC    +  A  L  K+   G +PNV+ Y+TLI G  
Sbjct: 137 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 196

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L   M+      GV   P+   Y+ II  L K G +++A    L+++   
Sbjct: 197 SEGRIEEARRLLDGMSCS----GVA--PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VT+ + I G+       EA     EM+D G+ PN     V++N   K G +  A 
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 310

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   +    V P+  T +  + G    G++    ++F  ++  G   D F+Y+ LI+G+
Sbjct: 311 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 370

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  EVE+A  L++E+  KGI P +  YN L  GL +    +RA KLF  M    +  D+
Sbjct: 371 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 430

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TY T IDG C    V   ++
Sbjct: 431 VTYSTMIDGYCKSENVAEAFS 451



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 122/231 (52%), Gaps = 2/231 (0%)

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
           GE G+V  PNT TY+II  GLC+   +++AK  F +M+   L P+    ++LI GF    
Sbjct: 2   GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D +E   +   MV  G+  N+++ NV+++ LCK GKM+ A+ +L  M+    +PN+ T+ 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L++G+C    + R  EL   ME         SY  +ING C  K++  A  L  ++ F 
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           G+KP VV Y+TL  G     + E A +L   M  + VA D   Y   I  L
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 230



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 2/208 (0%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + L PN  TYT +  G C A   NEAK    EM   G++P+  + + +++   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D   R+ D+MV C +  N  TYN L+ G C  GK+ +  E+   M ++GCK +  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI GYC+   +  AL L +E+  + + P+ V+Y  + +GL   +    A KL  +M  + 
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTYARR 390
           +  +   Y T I G     + R   ARR
Sbjct: 181 LKPNVVVYSTLIMGYA--SEGRIEEARR 206



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 47/292 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ ++    K+++     SLF  + S G+ P  + Y+ L++  CK G +     +
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+  FA   ++F +LI G C   +I EA+ LF ++ A    P+ +TY T+I+  C+
Sbjct: 488 FREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------KPNTVTYSIII------------- 164
            G    A  LFKEM   N  +  VF           KP+ VTY ++I             
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606

Query: 165 ----------------------DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                                   LCK   + +A +L  +M    L P++   ++L+  F
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
             A   +EA  +   +   G+ P+  +   ++N    +   ++A  L+  +V
Sbjct: 667 HEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N+L+  L K       + + + L   GL  D+ TY  L+  FC++ Q   G  +  
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   F+P     + L+ GL  + +I +A  L  K+  FG  PN+  YN LIN LC+ G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L+  M+  N       +PN +TYSI+ID  C+ G +D A   F +M  + +  
Sbjct: 380 DLDKAELLYSNMSLMN------LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGE 433

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            V  Y SLI+G C   D + A+ L IEM ++GV+P   +   +++  CK+ ++  A +L 
Sbjct: 434 TVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLY 493

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+   + PN +T+  L+ G C T K+    ELF  +     K  + +YN+LI GYC++
Sbjct: 494 NKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRD 553

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++++A  L  ++  KG+ P   TY  L  GL    +  +A     ++   +V  +   Y
Sbjct: 554 GKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613

Query: 371 RTFIDGLC 378
              + G C
Sbjct: 614 SALLHGYC 621



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++ + L+  L K    D    L  ++   G  P+L+ Y+ LIN  CK G +    ++
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +      PN +T++ LI   C   R+  A + F ++   G    V  YN+LING C+
Sbjct: 388 YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK 447

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF EMTN   E      P   T++ +I G CK+  V KA +L+ +M    +
Sbjct: 448 FGDLSAAESLFIEMTNKGVE------PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV T+T+LI G C  N   EA  L  E+V++ ++P  V+ NV++   C++GK+D A  
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M Q  + P+ +TY  L+ G C TG++++ K+    +     K ++  Y+ L++GYC
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + EALS   E+  +GI   +V +  L  G  +    +    L  +M    +  D  
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681

Query: 369 TYRTFID 375
            Y + ID
Sbjct: 682 IYTSMID 688



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 42/403 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+    K        SLF  + + G+ P   T++ LI+ +CK  QV   F ++ 
Sbjct: 435 VYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYN 494

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +++ +   PNV TFT+LI GLC+ +++ EA+ LF +L     +P  +TYN LI G CR G
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDG 554

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L ++M     + G+V  P+T TY  +I GLC  G V KAK+    +  +N+  
Sbjct: 555 KIDKAFELLEDMH----QKGLV--PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL 608

Query: 191 NVVTYTSLIHGFCHANDWNEA---------KG--------------------------LL 215
           N + Y++L+HG+C      EA         +G                          LL
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL 668

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M DQG++P+ V    +++   K G    A    DLMV  +  PN  TY  LM+G C  
Sbjct: 669 KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++R   LF  M++     +  +Y   ++   K   ++EA+ L++ +  KG+    VT+
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTH 787

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N +  G  ++ +   A K+  EM  N +  D  TY T I   C
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 45/428 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L K    D    L+  ++ + L P+  TYSILI+ FC+ G++ +    
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++      V  + SLI G C    +  A +LF ++   G EP   T+ +LI+G C+
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCK 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L+ +M + NG       PN  T++ +I GLC    + +A ELF ++    +
Sbjct: 483 DLQVQKAFKLYNKMID-NG-----ITPNVYTFTALISGLCSTNKMAEASELFDELVERKI 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  VTY  LI G+C     ++A  LL +M  +G+ P+  +   +++ LC  G++  A  
Sbjct: 537 KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK-------------------------- 282
            +D + + +V+ N   Y+ L+ G+C  G++                              
Sbjct: 597 FIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGAL 656

Query: 283 ---------ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                    +L   M   G + D+  Y  +I+ Y K    ++A   ++ +  +   P VV
Sbjct: 657 KQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVV 716

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC----VRPQVRFTYAR 389
           TY  L +GL +  + +RA  LF  MQ  +V  ++ TY  F+D L     ++  +   +A 
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM 776

Query: 390 RKGNSGNT 397
            KG   NT
Sbjct: 777 LKGLLANT 784



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 194/396 (48%), Gaps = 33/396 (8%)

Query: 14  FNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN+L+   +  ++ +D V+ + K + +  L P++ T S L+N   K+ +    + +F   
Sbjct: 158 FNLLVQNYVLSSRIFDAVV-IVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDES 216

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + +   P+  T +++++ +C     + A      ++A G + +++TYN LI+GLC+    
Sbjct: 217 VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRV 276

Query: 133 IVALNLFKEMTNGNG---------------------EIGVV---------FKPNTVTYSI 162
             A+ + K    G G                     E G+          F P     S 
Sbjct: 277 SEAVEV-KRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSG 335

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++DGL K+G +D A EL +++      PN+  Y +LI+  C   D ++A+ L   M    
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++PN ++ +++++  C++G++D A    D M+Q  +    + YN+L++G C  G ++  +
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAE 455

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF+ M + G +    ++  LI+GYCK+ +V++A  LYN++   GI P V T+  L  GL
Sbjct: 456 SLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGL 515

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               +   A +LF E+    +     TY   I+G C
Sbjct: 516 CSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYC 551



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 7/358 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+    ++   D    L + ++  GL PD YTY  LI+  C  G+VS     
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     N + +++L+ G C E R++EA +   ++   G   +++ +  LI+G  +
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                   +L K+M +         +P+ V Y+ +ID   KEG   KA E +  M  E  
Sbjct: 658 QPDRKTFFDLLKDMHDQG------LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC 711

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTYT+L++G C A + + A  L   M    V PN ++    ++ L K G M  A  
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG 771

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  +  N  T+N ++ GFC  G+ +   ++   M   G   D  +Y+ LI  YC
Sbjct: 772 LHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           ++  V  ++ L++ +  +G++P +V YN L +G     + ++A +L  +M    +  D
Sbjct: 831 RSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 176/399 (44%), Gaps = 41/399 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L   L +  H   V S F        F     +++L+  +    ++    VI   +  
Sbjct: 124 SLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFA 183

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           +   P V T ++L+ GL    + +    LF +    G  P+  T + ++  +C     + 
Sbjct: 184 NNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLR 243

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A    + M   NG     F  + VTY+++I GLCK   V +A E+   +  + L  +VVT
Sbjct: 244 AKEKIRWM-EANG-----FDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVT 297

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQ------------------------------ 224
           Y +L+ GFC    +     L+ EMV+ G                                
Sbjct: 298 YCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG 357

Query: 225 -----PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
                PN+   N ++N LCK G +D A  L   M   ++RPN  TY+ L+D FC +G+++
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                F  M   G     ++YN LING CK  ++  A SL+ E+  KG++PT  T+ +L 
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +  Q ++A KL+ +M  N +  +  T+   I GLC
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+  DL  +++LI+   K       F +   +      P+ V +TS+I     E    +A
Sbjct: 640 GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              +  +    C PNV+TY  L+NGLC+ G    A  LFK M   N        PN++TY
Sbjct: 700 FECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN------VPPNSITY 753

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
              +D L KEG + +A  L   M  + L  N VT+  +I GFC    ++EA  +L EM +
Sbjct: 754 GCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTE 812

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ P+ V+ + ++ E C++G +  + +L D M+   + P+   YN L+ G C+ G++++
Sbjct: 813 NGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDK 872

Query: 281 VKELFVSMESMGCKHDD 297
             EL   M   G   D+
Sbjct: 873 AFELRDDMLRRGIIPDN 889



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 17/215 (7%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV-------------SSN 231
           ++N+N +  +Y  ++H   H+  +  A  LL  ++ +   P  V             SS 
Sbjct: 96  HKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSST 155

Query: 232 VIMNELCKN----GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           +  N L +N     ++ +A  ++ LM   ++ P   T + L++G     K   V ELF  
Sbjct: 156 LGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDE 215

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
             + G + D ++ + ++   C+ K+   A      +   G   ++VTYN L HGL +  +
Sbjct: 216 SVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDR 275

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
              A+++   + G  +AAD  TY T + G C   Q
Sbjct: 276 VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 206/399 (51%), Gaps = 27/399 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N  L  LAK          F+++   G  PD +TYSI++   CK G++     + G
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-FGCEPNVITYNTLINGLCRT 129
           ++  S    NV+T++ +I G C  SR+ +A  +F  + +  GC P+V+T+N+L+ GLC  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG 157

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A  LF+ M     E      PN ++YS ++DGLCK G +D+A  L+ +M  ++  
Sbjct: 158 ERMSEAFVLFEYMAKAGCE------PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV-----------------SSNV 232
           P++V YTS + G C AN   EA     +MV +G + + V                 + N 
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQ 271

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++  LC++G +D A +  + M+  +  P+A  +NTL+   C + ++     LF  M+SM 
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 293 ---CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              C  +  +YNI+++  CK K+++EA  L NE+   G+ P VVTY+ L  GL ++ + +
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           RA  L  EM    V  D+ T  + ++ L    +V +  +
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS 430



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 199/419 (47%), Gaps = 52/419 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN LL  L   +       LF+ +   G  P++ +YS L++  CK G++     +
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     P++V +TS + GLC  +R+ EA     K+   G + + + ++T+I  LC+
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 129 TGHTIVALN-----------------LFKEMTNGN----GEI----------------GV 151
            GH   A N                  F+EM + N     E+                GV
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 152 VF------------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +              PN  TY+I++D LCK   +D+A+EL  +M    L+P+VVTY++L+
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G C     + A  LL EM  +GV P+  +   I+N L K GK+D A   L+ M      
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+  TYNTL+DG C  G+I+        M +  C  D FSY I+I   C++ +   A ++
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E+  +G+ P  V Y++L  GL      + AL+L   ++ +    D   ++  +DGLC
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLC 557



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 197/432 (45%), Gaps = 52/432 (12%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +++I+L  L K    D    L  +L   G+  ++ TYS++I+  CK  +V     
Sbjct: 70  PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 68  IFGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           IF  +     C  P+VVTF SL+KGLC+  R+ EA  LF  +   GCEPNVI+Y+TL++G
Sbjct: 130 IFKTMSSGGGCV-PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPN 156
           LC+ G    A  L++EM   +    +V                              K +
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 157 TVTYSIII-----------------DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
            V +S +I                 + LC+ G +D+A + F +M   N  P+   + +LI
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 200 HGFCHANDWNEAKGLLIEMVDQG---VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           H  C +    +   L   M         PN+ + N++++ LCK  ++D A  L++ M   
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + P+  TY+ L+DG C  GK++R  +L   M   G   D F+   ++N   K  +V+ A
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           LS    +  +G  P +VTYNTL  GL +  + + A+    +M       D  +Y   I  
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488

Query: 377 LCVRPQVRFTYA 388
           LC   Q    +A
Sbjct: 489 LCRSGQAAGAHA 500



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 174/343 (50%), Gaps = 12/343 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-- 72
           N ++  L ++   D     F+ + S    P    ++ LI+  CK  ++  G ++F R+  
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 73  LRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++  + P N+ T+  ++  LC   ++ EA  L  ++  +G  P+V+TY+ L++GLC+ G 
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A +L +EM+        VF P++ T + I++ L K G VD A      MK     P+
Sbjct: 390 LDRACDLLEEMSKEG-----VF-PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           +VTY +L+ G C A   +EA   L +MV     P+V S  +I+  LC++G+   A  +  
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            MV+  V P+   Y++L+DG    G  +   EL   +++  CK D   + ++++G CK  
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAG 560

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           + E+A  +   +   G      TY ++  GL ++ + ++A +L
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 12/318 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF---PDLYTYSILINCFCKMGQVSL 64
           PP    FN L+  + K+K     + LF+R+ S+  F   P+L TY+I+++  CK  Q+  
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +     +P+VVT+++L+ GLC   ++  A  L  ++   G  P+  T  +++N
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L + G    AL+  + M    G       P+ VTY+ ++DGLCK G +D+A     +M 
Sbjct: 418 ALSKAGKVDYALSHLETM-KARGST-----PDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+V +YT +I   C +     A  +  EMV +GV P+ V  + +++ L +NG  D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A   L+L+     +P+   +  ++DG C  GK     E+   M   G   D F+Y  ++
Sbjct: 532 LA---LELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588

Query: 305 NGYCKNKEVEEALSLYNE 322
           +G  K  +V++A  L ++
Sbjct: 589 SGLRKLGKVDKARQLVDD 606



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 9/173 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + ++N LL  L K    D  ++   ++ +    PD+++Y+I+I   C+ GQ +   
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF  +++    P+ V + SL+ GL      +E  AL   LK   C+P+ + +  +++GL
Sbjct: 500 AIFQEMVKRGVLPDTVLYHSLLDGLARNG--LEDLAL-ELLKTSLCKPDFVMHKMVLDGL 556

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           C+ G    A  + + M +        F  +  TY  ++ GL K G VDKA++L
Sbjct: 557 CKAGKAEDACEVVERMADAG------FPADAFTYISVVSGLRKLGKVDKARQL 603



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           GKI+ +  LF  +    G +H  F+YN  ++   K    + A   + ++  +G  P   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y+ +  GL +  + ++A +L  +++ + V  +  TY   IDG C   +V
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 196/384 (51%), Gaps = 5/384 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F  L+    +    + V +L   +   G   D  T ++++   C+ G+       
Sbjct: 71  PMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 130

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+L +   PNVV +T+ I GLC    + +A  +  ++   G +PNV T+ TLI+GLC+
Sbjct: 131 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 190

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  LF ++   +      +KPN  TY+++I G C+EG + +A+ L ++M  + L
Sbjct: 191 IGWTERAFRLFLKLIKSSS-----YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 245

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT+LI G C    ++ A  L+ +M  +G  PN+ + N +++  CK GK+  A +
Sbjct: 246 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 305

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +     ++ +  TY  L+   C  G I    +LF  M   GC  D  +Y  LI+ YC
Sbjct: 306 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYC 365

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + +++EE+   +++    G+ PT  TY ++  G  ++ ++  AL++F  M  N   AD+ 
Sbjct: 366 QQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI 425

Query: 369 TYRTFIDGLCVRPQVRFTYARRKG 392
           TY   I GLC   ++    A  +G
Sbjct: 426 TYGALISGLCKESRLEEAKALYEG 449



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 159/360 (44%), Gaps = 42/360 (11%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            +++  L +   +  V   F+R+   G  P++  Y+  I+  CK   V   F +   ++ 
Sbjct: 112 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 171

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI 133
               PNV T T+LI GLC       A  LF KL K+   +PNV TY  +I G CR G   
Sbjct: 172 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 231

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M           KPNT TY+ +I G CK G  D+A EL  +MK E   PN+ 
Sbjct: 232 RAEMLLVRMVEQG------LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 285

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I GFC      EA  +L     QG++ + ++  +++ E CK G +  A  L D M
Sbjct: 286 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 345

Query: 254 VQ-----------------CDVR------------------PNAFTYNTLMDGFCLTGKI 278
           V+                 C  R                  P   TY +++ G+C  G+ 
Sbjct: 346 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 405

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +F  M   GC  D  +Y  LI+G CK   +EEA +LY  +  K + P  VT  TL
Sbjct: 406 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 465



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 146/332 (43%), Gaps = 32/332 (9%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT--- 143
           ++       R+ EAA +  ++++ G    V T N ++     TG  + A  +F  MT   
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 144 -----NGNGEIGVV---------------------FKPNTVTYSIIIDGLCKEGFVDKAK 177
                 G G + VV                     F  +  T ++++  LC++G      
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E F +M      PNVV YT+ I G C      +A  +L EMV +G++PNV +   +++ L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 238 CKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           CK G  + A RL L L+     +PN  TY  ++ G+C  GK+ R + L V M   G K +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y  LI G+CK    + A  L N++  +G  P + TYN +  G  +  + + A K+  
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +  D  TY   I   C   Q   TYA
Sbjct: 309 MATSQGLKFDKITYTILITEHC--KQGHITYA 338



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 9/271 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++  L+G   K   +D    L  ++   G  P++YTY+ +I+ FCK G++   + +
Sbjct: 247 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 306

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                      + +T+T LI   C +  I  A  LF ++   GC P++  Y +LI+  C+
Sbjct: 307 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 366

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 +   F +       IG++  P   TY+ +I G CK G    A  +F +M     
Sbjct: 367 QRQMEESQKFFDKCLM----IGLL--PTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY +LI G C  +   EAK L   M+D+ + P  V+   +  E C+  K   A  
Sbjct: 421 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 480

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +LD +   D R    T + ++      G ++
Sbjct: 481 VLDRL---DKRQQVHTVDVVVRKLSALGDVD 508



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 6/242 (2%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++    + G + +A ++ L+M+   L   V T   ++        +  A+ +   M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P       ++   C+ GK++    LL  M +     +  T   ++   C  G+   V 
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E F  M   G   +  +Y   I+G CK + V++A  +  E+  +G+KP V T+ TL  GL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 343 FEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGN 396
            +I   ERA +LF+++ + +    +  TY   I G C      R ++       +G   N
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 397 TN 398
           TN
Sbjct: 249 TN 250



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 12/200 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+    + +  +     F +   IGL P   TY+ +I  +CK+G+ +L   +
Sbjct: 352 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 411

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F R++++ CFA ++ T+ +LI GLC ESR+ EA AL+  +      P  +T  TL    C
Sbjct: 412 FERMVQNGCFADSI-TYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYC 470

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R   T +A+++   +           +    T  +++  L   G VD A     ++  E+
Sbjct: 471 RREKTSIAVSVLDRLDK---------RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDED 521

Query: 188 LNPNVVTYTSLIHGFCHAND 207
              +  TYT  I+  C+ N+
Sbjct: 522 YAVDHATYTGFINS-CYENN 540


>gi|296087920|emb|CBI35203.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 181/353 (51%), Gaps = 43/353 (12%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M HMHP PPP+  F  LL  +AK KHY TVLSL K+++S G+ PD+YT +I+IN FC + 
Sbjct: 56  MLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLN 114

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK------------ 108
           +V     +  +IL+    P+  TFT+L++GLC   +I EA  +F K+             
Sbjct: 115 RVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNPNLIM 174

Query: 109 -AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A G  P++ TYN+LI+ LC          L  EM            PN V+ +I++D L
Sbjct: 175 IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK------IMPNVVSLNIVVDAL 228

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           CKEG V +A ++   M    + P+VVTY +L+ G C  ++ +EA  +   MV  G   NV
Sbjct: 229 CKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNV 288

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR------- 280
           VS N ++N             L + MV C   PN  TY+ L+D  C   ++         
Sbjct: 289 VSYNTLINA------------LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 336

Query: 281 ----VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
                ++LF ++   G + D +++NI+I G CK   ++EA  L+ E+    IK
Sbjct: 337 IEGTARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENDIK 389



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 29/232 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L     +  V +L   +    + P++ + +I+++  CK G+V+    +
Sbjct: 181 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDV 240

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVT+ +L+ G C  S + EA  +F  +   GC  NV++YNTLIN L  
Sbjct: 241 VDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINAL-- 298

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK-----------EGFVDKAK 177
                     F EM    G+I     PN VTYSI++D LCK           +     A+
Sbjct: 299 ----------FNEMV-ACGQI-----PNLVTYSILLDYLCKNHRLAEAMALLKAIEGTAR 342

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +LF  +    L P+V T+  +I G C     +EA  L  EM +  ++ N  S
Sbjct: 343 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENDIKSNSTS 394



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 28/279 (10%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A + F ++      P +  +  L+  + +  H    L+L K+M +     G+   P+  
Sbjct: 48  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS----FGI--PPDVY 101

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T +I+I+  C    VD A  +  ++      P+  T+T+L+ G C      EA  +  +M
Sbjct: 102 TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 161

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V +G QPN    N+IM                   +   + P+ FTYN+L+   C   + 
Sbjct: 162 VGEGFQPN---PNLIM-------------------IAKGISPDIFTYNSLIHALCNLCEW 199

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             V  L   M       +  S NI+++  CK  +V EA  + + +   G++P VVTY  L
Sbjct: 200 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 259

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             G     + + A+K+F  M  N    +  +Y T I+ L
Sbjct: 260 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINAL 298



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 13/224 (5%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D A   F +M + +  P +  +  L+        ++    L  +M   G+ P+V +  +
Sbjct: 46  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 105

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF------- 285
           ++N  C   ++D A  +L  +++   +P+  T+ TL+ G C+ GKI    ++F       
Sbjct: 106 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 165

Query: 286 ------VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                 + M + G   D F+YN LI+  C   E +   +L NE+    I P VV+ N + 
Sbjct: 166 FQPNPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 225

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L +  +   A  +   M    V  D  TY   +DG C+R ++
Sbjct: 226 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEM 269


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ LL  L++      V+  + R+ S G+ P+L  Y+ +IN  CK G V+    I  ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S  +P+  T+TS+I G C +  +  A  +F ++   GCEPN +TY+TLINGLC +G  
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L +EM       G++   +T T  II   LC  G  + A  LF+ MK +   PNV
Sbjct: 302 NEAFDLIREMILH----GILPTAHTCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNV 355

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G C +     A GL   M   GV PN V+ N ++N L +N ++  A  +L+L
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    PN  TYN ++ G+C+ G   +   +  +M   G   +  +YN +I GYC +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
              AL + + +   G KP   +Y  L  G  +I + E A  LF EM  + +  +  TY  
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535

Query: 373 FIDGLC 378
            IDG C
Sbjct: 536 LIDGYC 541



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 189/372 (50%), Gaps = 7/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  +++LG   K+   D+ L +F ++   G  P+  TYS LIN  C  G+V+  F
Sbjct: 247 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P   T T  I  LC      +A  LF  +K  GCEPNV TY  LI+GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C +G   VA+ LF  M+        VF PNTVTY+ +I+ L +   +  A  +   M   
Sbjct: 366 CVSGLLKVAIGLFHRMSRDG-----VF-PNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +PN+VTY  +I G+C   D  +A  ++  M+ +G   N+V+ N I+   C +G   +A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+LDLM     +P+ ++Y  L+ GFC   K+     LF  M   G   ++ +Y  LI+G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YCK+++++ A SL   +   G +P V TYN L HGL +      A +L   M    +  +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 367 TCTYRTFIDGLC 378
             TY   IDGLC
Sbjct: 600 VVTYTAMIDGLC 611



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +      + LF R++  G+FP+  TY+ LIN   +  ++   FV+
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+  +PN+VT+  +IKG C      +A  +   +   G   N++TYNT+I G C 
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+T  AL +   M +G        KP+  +Y+ +I G CK   ++ A  LF +M  + L
Sbjct: 473 SGNTTSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTYT+LI G+C     + A  LL  M   G +PNV + NV+++ L K      A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M++  + PN  TY  ++DG C  G  +   E+F  M   GC  +  +Y+ LI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +VEEA +L+ EL   G+ P  +TY  +        + E A      M          
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 707 TYGVLIKGL 715



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 175/361 (48%), Gaps = 6/361 (1%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           Y+    LF  + + G  P++YTY+ LI+  C  G + +   +F R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI  L    RI  A  +   +   GC PN++TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                    N VTY+ II G C  G    A  +   M+     P+  +YT LI GFC  +
Sbjct: 456 ------HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A GL  EMVD G+ PN V+   +++  CK+ K+D A+ LL+ M +   RPN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G       +  +EL   M   G   +  +Y  +I+G CKN     AL ++N++  +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G  P ++TY++L   L +  + E A  LF E++ + +  D  TY   I+   +  +V   
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 387 Y 387
           +
Sbjct: 690 F 690



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LIK   ++  +    +    L   G    +  Y+ L+  L R G T   ++ +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                  +PN + Y+ +I+ LCK+G V  A+ +  ++    ++P+  TYTS+I G C  +
Sbjct: 211 ------VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D + A  +  +M  +G +PN V+ + ++N LC +G+++ A  L+  M+   + P A T  
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             +   C  G       LFV M++ GC+ + ++Y  LI+G C +  ++ A+ L++ +   
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           G+ P  VTYN L + L E R+ + A  +   M  N  + +  TY   I G C+
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 168/426 (39%), Gaps = 100/426 (23%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++     + +  + L +   +   G  PD ++Y+ LI  FCK+ ++   F +F  +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI--------- 123
           +     PN VT+T+LI G C + ++  A +L   +K  GC PNV TYN LI         
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 124 --------------------------NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                                     +GLC+ G T +AL +F +M     E G +  PN 
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQGCL--PNL 635

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI----------HGF----- 202
           +TYS +I  L +EG V++A+ LF +++   L P+ +TY  +I          H F     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 203 -----CHANDWNEA---KGLLIE--MVDQ--GVQPNVVS--------------------- 229
                C    W      KGL  E  + DQ     P+VV                      
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 230 -----------SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                       N +++ L   G+   A+ LL  M+   + P+   YN+L+        +
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    +F  M + GC+     Y  LI   C+    +EA   +  +  +   P  V    L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875

Query: 339 FHGLFE 344
             GL  
Sbjct: 876 IDGLLR 881



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 135/345 (39%), Gaps = 55/345 (15%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           + HM  S   P V ++N+L+  L K  ++     L K +   G+FP++ TY+ +I+  CK
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G  SL   +F +++     PN++T++SLI+ L  E ++ EA  LF +L+  G  P+ IT
Sbjct: 613 NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGE-----IGVVFK----------------PNT 157
           Y  +I     +G    A N    M     +      GV+ K                P+ 
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732

Query: 158 V--------------------------------TYSIIIDGLCKEGFVDKAKELFLQMKY 185
           V                                  + ++  L   G   +A EL   M  
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L P+   Y SL+       + + A G+   M  QG + ++     ++  LC+  +   
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           A    + M+     P+      L+DG    G  +   E    ME+
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 6/146 (4%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G ++     P+   + SL+  L     +  A  +F  +   GCE ++  Y  LI  LC
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A   F+ M      +   + P+ V  +++IDGL ++G+ D   E    M+   
Sbjct: 846 QLHRRKEARITFENM------LMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKG 213
             P+   YT L         W    G
Sbjct: 900 YMPSFHIYTILAREASKKRSWKHVAG 925


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 179/347 (51%), Gaps = 7/347 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           +F  +   G+ PD  +Y ++   +C+MG++S        ++R  F  +  T T +I   C
Sbjct: 218 VFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFC 277

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            +         F K    G +PN+I + +LINGLC+ G    A  + +EM          
Sbjct: 278 EKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG------ 331

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEA 211
           +KPN  T++ +IDGLCK+G+ +KA  LFL++ + ++  PNV TYTS+IHG+C  +  N A
Sbjct: 332 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRA 391

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + LL  M +QG+ PN  +   +++   K G  + A  L+DLM +     N FTYN  +D 
Sbjct: 392 EMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDS 451

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G+     +L      +G + D  +Y ILI+  C+  +  EAL  ++++   G++P 
Sbjct: 452 LCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPD 511

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + TYNTL       R+ E + KLF E  G  +     TY + I G C
Sbjct: 512 MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYC 558



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 167/338 (49%), Gaps = 5/338 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D  T +++I+ FC+ G  S  F  F + +     PN++ FTSLI GLC    I +A
Sbjct: 261 GFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQA 320

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +  ++   G +PNV T+  LI+GLC+ G T  A  LF ++   +      +KPN  TY
Sbjct: 321 FEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDD-----YKPNVHTY 375

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I G CKE  +++A+ L  +MK + L PN  TYT LI G   A ++ +A  L+  M  
Sbjct: 376 TSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGK 435

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G   N+ + N  ++ LCK G+   A +LL    +  ++ +  TY  L+   C       
Sbjct: 436 EGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTRE 495

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
               F  M   G + D  +YN LI  + + + +EE+  L+ E    G+ PT  TY ++  
Sbjct: 496 ALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMIC 555

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G    R    ALK F  M  +    D+ TY   I GLC
Sbjct: 556 GYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLC 593



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 165/330 (50%), Gaps = 7/330 (2%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
           V   F +   +GL P+L  ++ LIN  CK G +   F +   +++  + PNV T T+LI 
Sbjct: 285 VFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALID 344

Query: 90  GLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           GLC +    +A  LF KL ++   +PNV TY ++I+G C+      A  L   M     E
Sbjct: 345 GLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMK----E 400

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            G+V  PNT TY+ +IDG  K G  +KA EL   M  E  + N+ TY + I   C    +
Sbjct: 401 QGLV--PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF 458

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EA  LL +    G+Q + V+  ++++ELC+      A      M +  V+P+  TYNTL
Sbjct: 459 LEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTL 518

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +  F    ++   ++LF     +G      +Y  +I GYC+++ V  AL  +N +   G 
Sbjct: 519 IAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGC 578

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            P  +TY  L  GL +  + + A +L+  M
Sbjct: 579 TPDSLTYGALISGLCKESKLDEACQLYEAM 608



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 179/376 (47%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 299 PNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRL 358

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+TS+I G C E ++  A  L +++K  G  PN  TY  LI+G  
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHS 418

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A  L   M    G+ G  F  N  TY+  ID LCK+G   +A +L  +     
Sbjct: 419 KAGNFEKAYELMDLM----GKEG--FSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLG 472

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  + VTYT LI   C   D  EA     +M   GVQP++ + N ++    +  +M+ + 
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L    V   + P   TY +++ G+C    ++   + F  M   GC  D  +Y  LI+G 
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGL 592

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +++EA  LY  +  KG+ P  VT  TL    +E  + + +    V ++  D     
Sbjct: 593 CKESKLDEACQLYEAMVDKGLSPCEVTRLTL---AYEYCKQDDSATAMVILERLDKKLWI 649

Query: 368 CTYRTFIDGLCVRPQV 383
            T  T I  LC   +V
Sbjct: 650 RTVNTLIRKLCSERKV 665



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 8/299 (2%)

Query: 88  IKGLCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           + G+  E  +V  A  +F +++  G  P+ ++Y  +    CR G         K+M    
Sbjct: 202 VTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRG 261

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                 F  +  T +++I   C++GF  +    F +     L PN++ +TSLI+G C   
Sbjct: 262 ------FVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRG 315

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL-LDLMVQCDVRPNAFTY 265
              +A  +L EMV +G +PNV +   +++ LCK G  + A RL L L+   D +PN  TY
Sbjct: 316 SIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTY 375

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            +++ G+C   K+NR + L   M+  G   +  +Y  LI+G+ K    E+A  L + +  
Sbjct: 376 TSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGK 435

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G    + TYN     L +  +   A KL  +     + ADT TY   I  LC R   R
Sbjct: 436 EGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTR 494



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 9/244 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-GFVDKAKELFLQMKYENLNPNVV 193
           A+N+  EM N +G +  V   N VT      G+  E G V  A+ +F +M+   + P+ V
Sbjct: 180 AVNMVIEMEN-HGLVLTVRTLNCVT------GVAGEMGLVGYAENVFDEMRVRGVCPDSV 232

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y  +   +C     ++    L +MV +G   +  +  ++++  C+ G         D  
Sbjct: 233 SYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKW 292

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V+  ++PN   + +L++G C  G I +  E+   M   G K + +++  LI+G CK    
Sbjct: 293 VELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWT 352

Query: 314 EEALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           E+A  L+ +L      KP V TY ++ HG  +  +  RA  L   M+   +  +T TY  
Sbjct: 353 EKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTC 412

Query: 373 FIDG 376
            IDG
Sbjct: 413 LIDG 416



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 81/181 (44%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           ++  F     + EA  ++IEM + G+   V + N +     + G +  A  + D M    
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P++ +Y  +   +C  G+I+        M   G   D+ +  ++I+ +C+        
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +++    G+KP ++ + +L +GL +    ++A ++  EM       +  T+   IDGL
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 378 C 378
           C
Sbjct: 347 C 347


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 44/418 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H     P   + N ++  + +    +   +LF  + + G+ P+  +Y +++  +CK+G V
Sbjct: 159 HNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNV 218

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                  G ++   F  +  T + +++  C +  +  A   F +    G  PN+I +  +
Sbjct: 219 LESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCM 278

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC+ G    A  + +EM      +G  +KPN  T++ +IDGLCK+G+ +KA  LFL+
Sbjct: 279 IEGLCKRGSVKQAFEMLEEM------VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 332

Query: 183 M-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           + + EN  PNV+TYT++I G+C     N A+ LL  M +QG+ PN  +   +++  CK G
Sbjct: 333 LVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAG 392

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             + A  L+++M +    PN  TYN ++DG C  G++    ++  S    G   D  +Y 
Sbjct: 393 NFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYT 452

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF--EIRQAER--------- 350
           ILI+ +CK  E+++AL L+N++   GI+P + +Y TL   +F  E R  E          
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI-AVFCREKRMKESEMFFEEAVR 511

Query: 351 -------------------------ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                                    ALK F  M  +  A+D+ TY   I GLC + ++
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 170/331 (51%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  ++  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 270 PNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRL 329

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS    PNV+T+T++I G C + ++  A  L +++K  G  PN  TY TLI+G C
Sbjct: 330 FLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHC 389

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A  L   M N  G     F PN  TY+ I+DGLCK+G V +A ++        
Sbjct: 390 KAGNFERAYELMNVM-NEEG-----FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+ + VTYT LI   C   +  +A  L  +MV  G+QP++ S   ++   C+  +M  + 
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
              +  V+  + P   TY +++ G+C  G +    + F  M   GC  D  +Y  LI+G 
Sbjct: 504 MFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGL 563

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           CK  +++EA  LY+ +  KG+ P  VT  TL
Sbjct: 564 CKQSKLDEARCLYDAMIEKGLTPCEVTRVTL 594



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 9/335 (2%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAF 110
           ++  F ++G+V     +   +     AP+  T   ++K +  E  +VE A  LF ++ A 
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVK-IVTEMGLVEYAENLFDEMCAR 196

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G +PN ++Y  ++ G C+ G      N+ +      G I   F  +  T S+I+   C++
Sbjct: 197 GVQPNCVSYRVMVVGYCKLG------NVLESDRWLGGMIERGFVVDNATLSLIVREFCEK 250

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           GFV +A   F +     L PN++ +T +I G C      +A  +L EMV +G +PNV + 
Sbjct: 251 GFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTH 310

Query: 231 NVIMNELCKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
             +++ LCK G  + A RL L L+   + +PN  TY  ++ G+C   K+NR + L   M+
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMK 370

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   +  +Y  LI+G+CK    E A  L N +  +G  P V TYN +  GL +  + +
Sbjct: 371 EQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQ 430

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            A K+      N + AD  TY   I   C + +++
Sbjct: 431 EAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIK 465



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 7/302 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++K      R+ EA  +  ++   G  P+  T N ++  +   G    A NLF EM    
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCAR- 196

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
              GV  +PN V+Y +++ G CK G V ++      M       +  T + ++  FC   
Sbjct: 197 ---GV--QPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKG 251

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A        + G++PN+++   ++  LCK G +  A  +L+ MV    +PN +T+ 
Sbjct: 252 FVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHT 311

Query: 267 TLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            L+DG C  G   +   LF+ +  S   K +  +Y  +I+GYC+++++  A  L + +  
Sbjct: 312 ALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKE 371

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           +G+ P   TY TL  G  +    ERA +L   M     + + CTY   +DGLC + +V+ 
Sbjct: 372 QGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQE 431

Query: 386 TY 387
            Y
Sbjct: 432 AY 433



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 23/269 (8%)

Query: 113 EPNVITYN---TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
           +PN +T++   T++  L     ++VAL+ F      +      F+  T  Y      L  
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSK-----FRHFTRLYIACAASLIS 124

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
               +KA E+   M               +  F       EA  ++IEM +QG+ P+  +
Sbjct: 125 NKNFEKAHEVMQCM---------------VKSFAEIGRVKEAIEMVIEMHNQGLAPSTKT 169

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            N ++  + + G ++ A  L D M    V+PN  +Y  ++ G+C  G +         M 
Sbjct: 170 LNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMI 229

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   D+ + ++++  +C+   V  AL  +      G++P ++ +  +  GL +    +
Sbjct: 230 ERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVK 289

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +A ++  EM G     +  T+   IDGLC
Sbjct: 290 QAFEMLEEMVGRGWKPNVYTHTALIDGLC 318


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N L+     +   D  L + +R+ + G+ P++ TY+ LI  +CK   +   F ++ 
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYE 281

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++RS   P+VVT ++L+ GLC + +  EA ALF ++   G  PN +TY TLI+ L +  
Sbjct: 282 GMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKAR 341

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               +L L  EM +     GVV   + V Y+ ++D L KEG +++AK++    + +N+ P
Sbjct: 342 RGSESLGLLGEMVSR----GVVM--DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP 395

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTYT L+   C A + + A+ +L++M ++ V PNVV+ + I+N L K G +  A+  +
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + PN  TY TL+DGF          +++  M   G + ++F  + L+NG  KN
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKN 515

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E A +L+ ++  +G+    V Y TL  GLF+      A K+  E+   +++ D   Y
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575

Query: 371 RTFIDGLC 378
             FI+ LC
Sbjct: 576 NVFINCLC 583



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 180/395 (45%), Gaps = 41/395 (10%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L KN + +   +LFK ++  GL  D   Y+ L++   K G +   F +   ++   
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            +P+ V +   I  LC   +  EA +   +++  G EP+  TYNT+I   CR G T  AL
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP------ 190
            L KEM   +       KPN +TY+ ++ GL + G V KAK L  +M      P      
Sbjct: 628 KLLKEMKRNS------IKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQ 681

Query: 191 -----------------------------NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                                        ++  Y +L+H  C       A  +L EM+ +
Sbjct: 682 RVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTR 741

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P+ ++ N ++   CK+  +DNA  +   M+   + PN  T+NTL+ G    G+I   
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 801

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +   M+ +G + ++ +Y+IL+ GY K     EAL LY E+  KG  P   TYN+L   
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +     +A +LF EM+   V   + TY   ++G
Sbjct: 862 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 170/333 (51%), Gaps = 6/333 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+  ++ LI+ +CK+  ++    +  R+     A +VV + SL+ G         A  + 
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++KA G EPNV+TY  LI   C+      A +L++ M       GV+  P+ VT S ++
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS----GVL--PDVVTLSALV 299

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DGLC++G   +A  LF +M    + PN VTY +LI     A   +E+ GLL EMV +GV 
Sbjct: 300 DGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVV 359

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
            ++V    +M+ L K GK++ A  +L      ++ PN  TY  L+D  C  G I+  +++
Sbjct: 360 MDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQV 419

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            + ME      +  +++ +ING  K   + +A     ++   GI P VVTY TL  G F+
Sbjct: 420 LLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK 479

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  E AL ++ +M    V A+     + ++GL
Sbjct: 480 FQGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + L+  L ++  +    +LF+ ++ IG+ P+  TY  LI+   K  + S    +
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++      ++V +T+L+  L  E +I EA  +    ++    PN +TY  L++  CR
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  +  +M     E  V+  PN VT+S II+GL K G + KA +   +MK   +
Sbjct: 410 AGNIDGAEQVLLQME----EKSVI--PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGI 463

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY +LI GF        A  +  +M+ +GV+ N    + ++N L KNG ++ A  
Sbjct: 464 APNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEA 523

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  +  +   Y TLMDG   TG +    ++   +       D   YN+ IN  C
Sbjct: 524 LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLC 583

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +  EA S   E+   G++P   TYNT+        +  +ALKL  EM+ N +  +  
Sbjct: 584 TLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643

Query: 369 TYRTFIDGL 377
           TY T + GL
Sbjct: 644 TYTTLVVGL 652



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 184/404 (45%), Gaps = 29/404 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+  L K    +    + +   S  + P+  TY++L++  C+ G +     +  ++ 
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNVVTF+S+I GL     + +AA    K+K  G  PNV+TY TLI+G  +     
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 134 VALNLFKEM--------------------TNGNGE-IGVVFKP--------NTVTYSIII 164
            AL+++++M                     NGN E    +FK         + V Y+ ++
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DGL K G +  A ++  ++  +NL+P+ V Y   I+  C    ++EAK  L EM + G++
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+  + N ++   C+ GK   A +LL  M +  ++PN  TY TL+ G    G + + K L
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M S G      ++  ++     ++  +  L ++  +   G+   +  YNTL H L  
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              A  A  +  EM    +A DT T+   I G C    +   +A
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFA 768



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 174/384 (45%), Gaps = 46/384 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ + CL     +    S  K + + GL PD  TY+ +I   C+ G+ S    +
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT---------- 118
              + R+   PN++T+T+L+ GL     + +A  L  ++ + G  P  +T          
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689

Query: 119 -------------------------YNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVV 152
                                    YNTL++ LC  G    A  +  EM T G       
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG------- 742

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+T+T++ +I G CK   +D A  ++ QM ++ L+PN+ T+ +L+ G   A    EA 
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 802

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L +M   G++PN ++ ++++    K      A RL   MV     P A TYN+LM  F
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK---EVEEALSLYNELPFKGIK 329
              G +N+ KELF  M+  G  H   +Y+IL+NG+ K +   EV   L    EL FK  K
Sbjct: 863 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922

Query: 330 PTVVTYNTLFHGLFEIRQAERALK 353
            T+ + +  F       +A R LK
Sbjct: 923 GTISSMSRAFSRPGMTGEARRLLK 946



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 35/387 (9%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFA 78
           GCL K   Y       +++   G+ P++ TY  LI+ F K         ++  +L     
Sbjct: 446 GCLGKAADY------MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE 499

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
            N     SL+ GL     I  A ALF  +   G   + + Y TL++GL +TG+   A  +
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559

Query: 139 FKEMTNGNGEIGVV-----------------------------FKPNTVTYSIIIDGLCK 169
            +E+   N     V                              +P+  TY+ +I   C+
Sbjct: 560 GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR 619

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           EG   KA +L  +MK  ++ PN++TYT+L+ G   A    +AK LL EM   G  P  ++
Sbjct: 620 EGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
              ++     + + D    + +LM+   +  +   YNTL+   C  G       +   M 
Sbjct: 680 HQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML 739

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G   D  ++N LI G+CK+  ++ A ++Y ++  +G+ P + T+NTL  GL    +  
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDG 376
            A  +  +M+   +  +  TY   + G
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTG 826



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 165/355 (46%), Gaps = 10/355 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D  +Y+I +    + G   L   +   + +   + + VT ++ + GLC    + EAAAL 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 105 TKL-KAFGCEP-NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
             L +  G +  +V+ +N LI+G C+      AL + + MT      GV    + V Y+ 
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQ----GVAL--DVVGYNS 227

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G    G  D A E+  +MK + + PNVVTYT+LI  +C     +EA  L   MV  G
Sbjct: 228 LVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P+VV+ + +++ LC++G+   A  L   M +  V PN  TY TL+D      + +   
Sbjct: 288 VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M S G   D   Y  L++   K  ++EEA  +        I P  VTY  L    
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGNSG 395
                 + A ++ ++M+   V  +  T+ + I+GL  R  +     Y R+  +SG
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSG 462



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 4/301 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           A + V++   +  L  +     A  + +++   G   + +T +T + GLCRTG    A  
Sbjct: 112 AADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAA 171

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L + +  G G  G+    + V ++ +IDG CK   +  A  +  +M  + +  +VV Y S
Sbjct: 172 LAEMLVRGRGIDGL----DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNS 227

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+ GF H+ D + A  ++  M   GV+PNVV+   ++ E CK   MD A  L + MV+  
Sbjct: 228 LVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+  T + L+DG C  G+ +    LF  M+ +G   +  +Y  LI+   K +   E+L
Sbjct: 288 VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L  E+  +G+   +V Y  L   L +  + E A  +    Q +++  +  TY   +D  
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 378 C 378
           C
Sbjct: 408 C 408


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 180/342 (52%), Gaps = 15/342 (4%)

Query: 9   PPVSSFNILL------GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V+++N L+      G      H D    L K +   G+ P   T+ +LIN +CK    
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  + +   A +VVT+ SLI GLC+E ++ E   L  +++  G  PN IT+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + G C+ G    A +    MT  N E      P+ V Y+I+ID   + G ++ A  +   
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVE------PDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++PNV TY  LI GF  + DW  A GLL EM ++G++ +VV+ NV++  LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A +LLD M +  + PN  TYNT++ GFC  G I    E+   ME    + +  +YN+
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            I  +C+  +++EA  L NE+  K + P  +TY T+  G+ E
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 189/384 (49%), Gaps = 22/384 (5%)

Query: 5   HPS-PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP   P  SS N LL  L   K  D     F+      + PD+YT++ +I+  C++GQ+ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAES---RIVEAAALFTKLKAFGCEPNVITYN 120
               +   I     AP+V T+ SLI G C +     +     L  ++   G  P  +T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LING C+  +T  A+ +F+EM             + VTY+ +I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQG------IAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 181 LQMKYENLNPNVVTYTSLIHGFCH------ANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            +M+   L+PN +T+  ++ GFC       ANDW +       M ++ V+P+VV  N+++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYNILI 376

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +   + GKM++A  + + M +  + PN  TYN L+ GF  +G       L   M+  G +
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  +YN+LI   C   EV +A+ L +E+   G++P  +TYNT+  G  +    + A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M+     A+  TY  FI   C
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFC 520



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P   + + L+       +V L    F   LR   +P++ TF ++I GLC   ++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN---LFKEMTNGNGEIGVVFKPNTVTY 160
              +KA+G  P+V TYN+LI+G C+ G      +   L KEM     E G+   P  VT+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTF 267

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            ++I+G CK      A  +F +MK + +  +VVTY SLI G C      E   L+ EM D
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ PN ++   ++   CK G M +A+  +D M + +V P+   YN L+D +   GK+  
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +  +M   G   +  +YN LI G+ ++ +   A  L +E+  KGI+  VVTYN L  
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            L    +  +A+KL  EM    +  +  TY T I G C +  ++  Y  R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FN ++  L +         + K + + GL P + TY+ LI+ +CK G     +  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++   ++ +  +P  VTF  LI G C  S    A  +F ++K  G   +V+TYN+LI+G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G     + L +EM +      +   PN +T+  ++ G CK+G +  A +    M  
Sbjct: 309 LCSEGKVEEGVKLMEEMED------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            N+ P+VV Y  LI  +       +A  +   M  +G+ PNV + N ++    ++G   +
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS LLD M +  +  +  TYN L+   C  G++ +  +L   M  +G + +  +YN +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C    ++ A  +   +     +  VVTYN       +I + + A  L  EM    +  
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 366 DTCTYRTFIDGLCVR---PQVR 384
           +  TY T  +G+  +   P +R
Sbjct: 543 NGITYETIKEGMMEKGYTPDIR 564



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 41/314 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F +L+    KN +    + +F+ +   G+   + TY+ LI+  C  G+V  G  +
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAES--------------------------------- 95
              +     +PN +TF  ++KG C +                                  
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381

Query: 96  --RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ +A A+   +   G  PNV TYN LI G  R+G    A  L  EM     E G+  
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK----EKGI-- 435

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           + + VTY+++I  LC +G V KA +L  +M    L PN +TY ++I GFC   +   A  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M     + NVV+ NV +   C+ GKMD A+ LL+ M+   + PN  TY T+ +G  
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555

Query: 274 LTGKINRVKELFVS 287
             G    ++   VS
Sbjct: 556 EKGYTPDIRGCTVS 569



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 135/338 (39%), Gaps = 77/338 (22%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           + L+  L R    + A + F       GE     +P+T + + ++ GL     VD A++ 
Sbjct: 123 DMLVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKA 178

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCH----------AND---WNEA--------------- 211
           F       ++P++ T+ ++I G C           A D   W  A               
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 212 KG----------LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           KG          LL EMV+ G+ P  V+  V++N  CKN     A R+ + M Q  +  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKH----------- 295
             TYN+L+ G C  GK+    +L   ME +G               CK            
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 296 ---------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                    D   YNILI+ Y +  ++E+A+++   +  KGI P V TYN L  G     
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               A  L  EM+   + AD  TY   I  LC + +VR
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 180/342 (52%), Gaps = 15/342 (4%)

Query: 9   PPVSSFNILL------GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V+++N L+      G      H D    L K +   G+ P   T+ +LIN +CK    
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           +    +F  + +   A +VVT+ SLI GLC+E ++ E   L  +++  G  PN IT+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + G C+ G    A +    MT  N E      P+ V Y+I+ID   + G ++ A  +   
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVE------PDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++PNV TY  LI GF  + DW  A GLL EM ++G++ +VV+ NV++  LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A +LLD M +  + PN  TYNT++ GFC  G I    E+   ME    + +  +YN+
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            I  +C+  +++EA  L NE+  K + P  +TY T+  G+ E
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 189/384 (49%), Gaps = 22/384 (5%)

Query: 5   HPS-PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           HP   P  SS N LL  L   K  D     F+      + PD+YT++ +I+  C++GQ+ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAES---RIVEAAALFTKLKAFGCEPNVITYN 120
               +   I     AP+V T+ SLI G C +     +     L  ++   G  P  +T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LING C+  +T  A+ +F+EM             + VTY+ +I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQG------IAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 181 LQMKYENLNPNVVTYTSLIHGFCH------ANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            +M+   L+PN +T+  ++ GFC       ANDW +       M ++ V+P+VV  N+++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYNILI 376

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +   + GKM++A  + + M +  + PN  TYN L+ GF  +G       L   M+  G +
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  +YN+LI   C   EV +A+ L +E+   G++P  +TYNT+  G  +    + A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M+     A+  TY  FI   C
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFC 520



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P   + + L+       +V L    F   LR   +P++ TF ++I GLC   ++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN---LFKEMTNGNGEIGVVFKPNTVTY 160
              +KA+G  P+V TYN+LI+G C+ G      +   L KEM     E G+   P  VT+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTF 267

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            ++I+G CK      A  +F +MK + +  +VVTY SLI G C      E   L+ EM D
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ PN ++   ++   CK G M +A+  +D M + +V P+   YN L+D +   GK+  
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +  +M   G   +  +YN LI G+ ++ +   A  L +E+  KGI+  VVTYN L  
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            L    +  +A+KL  EM    +  +  TY T I G C +  ++  Y  R
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIR 497



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 12/382 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FN ++  L +         + K + + GL P + TY+ LI+ +CK G     +  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++   ++ +  +P  VTF  LI G C  S    A  +F ++K  G   +V+TYN+LI+G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G     + L +EM +      +   PN +T+  ++ G CK+G +  A +    M  
Sbjct: 309 LCSEGKVEEGVKLMEEMED------LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            N+ P+VV Y  LI  +       +A  +   M  +G+ PNV + N ++    ++G   +
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS LLD M +  +  +  TYN L+   C  G++ +  +L   M  +G + +  +YN +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C    ++ A  +   +     +  VVTYN       +I + + A  L  EM    +  
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 366 DTCTYRTFIDGLCVR---PQVR 384
           +  TY T  +G+  +   P +R
Sbjct: 543 NGITYETIKEGMMEKGYTPDIR 564



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 41/317 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F +L+    KN +    + +F+ +   G+   + TY+ LI+  C  G+V  G  +
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAES--------------------------------- 95
              +     +PN +TF  ++KG C +                                  
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381

Query: 96  --RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ +A A+   +   G  PNV TYN LI G  R+G    A  L  EM     E G+  
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK----EKGI-- 435

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           + + VTY+++I  LC +G V KA +L  +M    L PN +TY ++I GFC   +   A  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M     + NVV+ NV +   C+ GKMD A+ LL+ M+   + PN  TY T+ +G  
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555

Query: 274 LTGKINRVKELFVSMES 290
             G    ++   VS  S
Sbjct: 556 EKGYTPDIRGCTVSQAS 572



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 135/338 (39%), Gaps = 77/338 (22%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           + L+  L R    + A + F       GE     +P+T + + ++ GL     VD A++ 
Sbjct: 123 DMLVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKA 178

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCH----------AND---WNEA--------------- 211
           F       ++P++ T+ ++I G C           A D   W  A               
Sbjct: 179 FRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 212 KG----------LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           KG          LL EMV+ G+ P  V+  V++N  CKN     A R+ + M Q  +  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKH----------- 295
             TYN+L+ G C  GK+    +L   ME +G               CK            
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 296 ---------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                    D   YNILI+ Y +  ++E+A+++   +  KGI P V TYN L  G     
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               A  L  EM+   + AD  TY   I  LC + +VR
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N L+   +++  + +   L   +   G+  D+ TY++LI   C  G+V     +
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN +T+ ++I+G C +  I  A  + T+++      NV+TYN  I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A +L  EM +          PN +TY  I +G+ ++G+    +   +    EN
Sbjct: 522 IGKMDEANDLLNEMLDK------CLVPNGITYETIKEGMMEKGYTPDIRGCTVSQASEN 574


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 202/431 (46%), Gaps = 61/431 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L +   +D  L ++  +   G+ PD   YS L++   KM        +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL   F  + +TF ++I GLC   ++VEA  +F K+K  GC P+ ITY TLI+G C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 129 TGHTIVALN-----------------------LFK-----EMTNGNGEIGVV-FKPNTVT 159
             +   A                         LFK     E+T+   E+G+    PN VT
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +IDG CKEG +DKA   + +M    L+ N++  ++++ G       +EA  L+ +MV
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 220 DQG--------------------------------VQPNVVSSNVIMNELCKNGKMDNAS 247
           D G                                + PN +  N+ +  LCK GK+D+A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R   ++      P+ FTY TL+ G+   G ++    L   M   G   +  +YN LING 
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK++ V+ A  L+++L  KG+ P VVTYNTL  G  +I   + A KL  +M    ++   
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 368 CTYRTFIDGLC 378
            TY   I+GLC
Sbjct: 855 VTYSALINGLC 865



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 5/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L KN    T   +++++  +G+ PD++  SI++N FCK G+V      
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN+VT+ SLI G  +   +  A  +   +   G   NV+TY  LI G C+
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M     E  +V  P+   Y ++IDG C+ G +D A  L  +M    L
Sbjct: 309 QCKMDEAEKVLRGMQE---EAALV--PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+    SLI+G+C   + +EA+G++  MVD  ++P+  S N +++  C+ G    A  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+Q  + P   TYNTL+ G C  G  +   +++  M   G   D+  Y+ L++G  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  E A +L+ ++  +G   + +T+NT+  GL ++ +   A ++F +M+    + D  
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 369 TYRTFIDGLC 378
           TYRT IDG C
Sbjct: 544 TYRTLIDGYC 553



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   +I++    K+   D      K++ ++G+ P++ TY  LIN +  +G V     +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLC 127
              +     + NVVT+T LIKG C + ++ EA  +   ++      P+   Y  LI+G C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 128 RTGHTIVALNLFKEM---------------TNG---NGEI----GVV-------FKPNTV 158
           RTG    A+ L  EM                NG    GEI    GV+        KP++ 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ ++DG C+EG   +A  L  +M  E + P V+TY +L+ G C    +++A  +   M
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 463

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +GV P+ V  + +++ L K    + AS L   ++      +  T+NT++ G C  GK+
Sbjct: 464 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 523

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +E+F  M+ +GC  D  +Y  LI+GYCK   V +A  +   +  + I P++  YN+L
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 583

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF+ R+      L  EM    +  +  TY   IDG C
Sbjct: 584 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 190/366 (51%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+++L    +       L +F  +   G  P L + + L+N   K G+      ++ +++
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    P+V   + ++   C + ++ EAA    K++  G EPN++TY++LING    G   
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNV 192
            A  + K M+    E GV    N VTY+++I G CK+  +D+A+++   M+ E  L P+ 
Sbjct: 279 AAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  LI G+C     ++A  LL EM+  G++ N+   N ++N  CK G++  A  ++  
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV  +++P++++YNTL+DG+C  G  +    L   M   G +    +YN L+ G C+   
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++AL +++ +  +G+ P  V Y+TL  GLF++   E A  L+ ++          T+ T
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 373 FIDGLC 378
            I GLC
Sbjct: 513 MISGLC 518



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 196/431 (45%), Gaps = 65/431 (15%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K         +F ++  +G  PD  TY  LI+ +CK   V   F + G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY------------- 119
            R   +P++  + SLI GL    R+VE   L T++   G  PN++TY             
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 120 ----------------------NTLINGLCRTGHTIVALNLFKEMTNG------------ 145
                                 +T+++GL R G    A  L ++M +             
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 146 --------------NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
                         +        PN + Y+I I GLCK G VD A+  F  +  +   P+
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY +LIHG+  A + +EA  L  EM+ +G+ PN+V+ N ++N LCK+  +D A RL  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            + Q  + PN  TYNTL+DG+C  G ++   +L   M   G      +Y+ LING CK+ 
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++E ++ L N++   G+   ++ Y TL  G     + ++  KL+  M    ++    +++
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHK 928

Query: 372 TFIDGLCVRPQ 382
             +D   +RPQ
Sbjct: 929 Q-VD---LRPQ 935



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 171/366 (46%), Gaps = 38/366 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
            P  P +  +N L+  L K++    V  L   +   GL P++ TY  LI+ +CK G +  
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG------------- 111
            F  +  +  +  + N++  ++++ GL    RI EA  L  K+   G             
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 112 ---------------CE----PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
                          C+    PN I YN  I GLC+TG    A   F  M +  G     
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF-SMLSLKG----- 744

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F P+  TY  +I G    G VD+A  L  +M    L PN+VTY +LI+G C + + + A+
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  ++  +G+ PNVV+ N +++  CK G MD A +L D M++  + P+  TY+ L++G 
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G I R  +L   M   G       Y  L+ GY ++ E+++   LY+ +  + +  T 
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTA 924

Query: 333 VTYNTL 338
           +++  +
Sbjct: 925 ISHKQV 930



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 42/384 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V ++ +L+    K    D    + + +     L PD   Y +LI+ +C+ G++     + 
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +LR     N+    SLI G C    I EA  + T++  +  +P+  +YNTL++G CR 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           GHT  A NL  +M     E      P  +TY+ ++ GLC+ G  D A +++  M    + 
Sbjct: 416 GHTSEAFNLCDKMLQEGIE------PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 469

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ V Y++L+ G     ++  A  L  +++ +G   + ++ N +++ LCK GKM  A  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFC----------LTGKINR------------------- 280
            D M      P+  TY TL+DG+C          + G + R                   
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 589

Query: 281 ------VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
                 V +L   M   G   +  +Y  LI+G+CK   +++A S Y E+   G+   ++ 
Sbjct: 590 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 335 YNTLFHGLFEIRQAERALKLFVEM 358
            +T+  GL+ + + + A  L  +M
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKM 673



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 50/388 (12%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG----LFPDLYTYSILINCFCKMG 60
           HP+PP + S                 L L +R N+I     +F D    ++L N      
Sbjct: 37  HPAPPELVS-------------RICRLVLLRRCNAISKLNFVFSDDIVDAVLRNLRLN-P 82

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             SLGF  F    ++ F PNV ++  L+        I+    ++ + +A+         N
Sbjct: 83  TASLGFFQFVSKQQN-FRPNVKSYCKLV-------HILSRGRMYDETRAY--------LN 126

Query: 121 TLINGLCRTGHTIVALNLFKEMTN--GNGEIGVV--FKPNTVTYSIIIDGLCKEGFVDKA 176
            L++ LC+          FK+  N   +  +GV   F  +   + +I+    ++G    A
Sbjct: 127 QLVD-LCK----------FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNA 175

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             +F  M      P++ +  SL++      + + A  +  +M+  G+ P+V   ++++N 
Sbjct: 176 LYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNA 235

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK+GK+D A+  +  M    V PN  TY++L++G+   G +   K +   M   G   +
Sbjct: 236 FCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRN 295

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
             +Y +LI GYCK  +++EA  +   +  +  + P    Y  L  G     + + A++L 
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            EM    +  +     + I+G C R ++
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEI 383


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 186/372 (50%), Gaps = 12/372 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P  V ++N L+    +    D    L   + S+ + PD YTY+ +I   C  G+V    
Sbjct: 105 APVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDAL 161

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +L+    P+VVT+T L++ +C  S   EA  +  +++A GC PN++TYN +ING+
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGM 221

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A    KE+ N     G  F+P+ V+Y+ ++ GLC     D  K LF +M  +
Sbjct: 222 CREGRVDDA----KEILNRLSSYG--FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN VT+  L+  FC       A  +L +M   G  PN    N+++N +CK G++D+A
Sbjct: 276 KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA 335

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
              L+ M      P+  +Y T++ G C  G+    KEL   M    C  ++ ++N  I  
Sbjct: 336 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 395

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C+   +E+A+ L   +P  G    +VTYN L HG     + + AL+LF  +       +
Sbjct: 396 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPN 452

Query: 367 TCTYRTFIDGLC 378
           T TY T + GLC
Sbjct: 453 TITYTTLLTGLC 464



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 198/433 (45%), Gaps = 61/433 (14%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP   ++  ++  L         L+L   +   G  P + TY++L+   CK       
Sbjct: 136 PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN+VT+  +I G+C E R+ +A  +  +L ++G +P++++Y T++ G
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255

Query: 126 LCRTGHTIVALNLFKEMTNGN---GEI------------GVVFK--------------PN 156
           LC          LF EM +      E+            G+V +              PN
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 315

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T   +I+I+ +CK+G VD A +    M     NP+ ++YT+++ G C A  W  AK LL 
Sbjct: 316 TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLP 375

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ--CDV---------------- 258
           EMV +   PN V+ N  +  LC+ G ++ A +L++LM +  C V                
Sbjct: 376 EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 435

Query: 259 --------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                          PN  TY TL+ G C   +++   EL   M    C  +  ++N+L+
Sbjct: 436 RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLV 495

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + +C+   VEEA+ L N++   G  P ++T+NTL  G+ +   +E AL+L   +    V+
Sbjct: 496 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 555

Query: 365 ADTCTYRTFIDGL 377
            DT TY + +D L
Sbjct: 556 LDTITYSSVVDVL 568



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 196/436 (44%), Gaps = 67/436 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +LL  + K+  +   +++   + + G  P++ TY+++IN  C+ G+V     I
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 233

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+    F P++V++T+++KGLCA  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 234 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 293

Query: 129 TGHTIVALNLFKEMTN------------------GNGEIGVVFK-----------PNTVT 159
            G    A+ + ++M+                     G +   +            P+T++
Sbjct: 294 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 353

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPN---------------------------- 191
           Y+ ++ GLC+ G  + AKEL  +M  +N  PN                            
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 413

Query: 192 -------VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                  +VTY +L+HGFC     + A  L   +     +PN ++   ++  LC   ++D
Sbjct: 414 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLD 470

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A+ LL  M+Q D   NA T+N L+  FC  G +    EL   M   GC  +  ++N L+
Sbjct: 471 AAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 530

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  K+   EEAL L + L  KG+    +TY+++   L    + E A+++   +Q   + 
Sbjct: 531 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 590

Query: 365 ADTCTYRTFIDGLCVR 380
                Y   +  LC R
Sbjct: 591 PKVGMYNKILFALCKR 606



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 179/398 (44%), Gaps = 32/398 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+  +L  L   + +D V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 244 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 303

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    PN      +I  +C + R+ +A      +  +GC P+ I+Y T++ GLCR
Sbjct: 304 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 363

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
            G    A  L  EM   N                  G I    K              VT
Sbjct: 364 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ ++ G C +G VD A ELF  +  E   PN +TYT+L+ G CHA   + A  LL  M+
Sbjct: 424 YNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMI 480

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +    N V+ NV+++  C+ G ++ A  L++ M++    PN  T+NTL+DG        
Sbjct: 481 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 540

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              EL   + S G   D  +Y+ +++   +    EEA+ + + +   G++P V  YN + 
Sbjct: 541 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             L +  + ++A+  F  M  N    +  TY   I+GL
Sbjct: 601 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 9/301 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +A G   +V  YNTL+ G CR G    A  
Sbjct: 71  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARR 130

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ II GLC  G V  A  L   M      P+VVTYT 
Sbjct: 131 LIASMP---------VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTV 181

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C ++ + EA  +L EM  +G  PN+V+ NVI+N +C+ G++D+A  +L+ +    
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 241

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+  +Y T++ G C   + + VK LF  M    C  ++ ++++L+  +C+   VE A+
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  ++   G  P     N + + + +  + + A      M       DT +Y T + GL
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 378 C 378
           C
Sbjct: 362 C 362



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 155/338 (45%), Gaps = 9/338 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P  +  NI++  + K    D        +   G  PD  +Y+ ++   C+ G+   
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   ++R    PN VTF + I  LC +  I +A  L   +  +GC   ++TYN L++
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 429

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL LF  +           +PNT+TY+ ++ GLC    +D A EL   M 
Sbjct: 430 GFCVQGRVDSALELFNNLP---------CEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++   N VT+  L+  FC      EA  L+ +M++ G  PN+++ N +++ + K+   +
Sbjct: 481 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 540

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL  +V   V  +  TY++++D      +     ++  +++ MG +     YN ++
Sbjct: 541 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
              CK  E ++A+  +  +   G  P   TY  L  GL
Sbjct: 601 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 138/300 (46%), Gaps = 9/300 (3%)

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           ++ L A   + EAA L     + G  P+V     LI  LCR G T  A  + +       
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            + V        Y+ ++ G C+ G +D A+ L   M    + P+  TYT +I G C    
Sbjct: 106 PVDVF------AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGR 156

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             +A  LL +M+ +G QP+VV+  V++  +CK+     A  +LD M      PN  TYN 
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +++G C  G+++  KE+   + S G + D  SY  ++ G C  +  ++   L+ E+  K 
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
             P  VT++ L          ERA+++  +M  +    +T      I+ +C + +V   Y
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 7/376 (1%)

Query: 9   PPVSSFNIL-LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  SS+ ++ +GC    K  +    L   +   G  PD  T ++++   C+ G V+    
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 273

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F +++   F PN++ FTSLI GLC +  I +A  +  ++   G +PNV T+  LI+GLC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A  LF ++   +      +KPN  TY+ +I G CKE  +++A+ LF +MK + 
Sbjct: 334 KRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNV TYT+LI+G C A  +  A  L+  M D+G  PN+ + N  ++ LCK  +   A 
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+    C +  +  TY  L+   C    IN+    F  M   G + D    NILI  +
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ K+++E+  L+  +   G+ PT  TY ++     +    + ALK F  M+ +    D+
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + I GLC +  V
Sbjct: 569 FTYGSLISGLCKKSMV 584



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+TS+I G C E ++  A  LF+++K  G  PNV TY TLING C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    +     E+ N  G+ G  F PN  TY+  ID LCK+    +A EL  +     
Sbjct: 405 KAG----SFGRAYELMNLMGDEG--FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  + VTYT LI   C  ND N+A      M   G + ++  +N+++   C+  KM  + 
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL  L+V   + P   TY +++  +C  G I+   + F +M+  GC  D F+Y  LI+G 
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V+EA  LY  +  +G+ P  VT  TL +   +   +  A+ L   +   D     
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWI 635

Query: 368 CTYRTFIDGLCVRPQV 383
            T RT +  LC   +V
Sbjct: 636 RTVRTLVRKLCSEKKV 651



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 44/354 (12%)

Query: 33  LFKRLNSIGLFPDLYTYSIL-INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           +F  ++  G+ PD  +Y ++ I CF + G++         +++  F P+  T T ++  L
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +  A   F K+   G +PN+I + +LI+GLC+ G    A  + +EM   NG    
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG---- 317

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYENLNPNVVTYTSLIHGFCHANDWNE 210
            +KPN  T++ +IDGLCK G+ +KA  LFL+ ++ +   PNV TYTS+I G+        
Sbjct: 318 -WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY-------- 368

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                                      CK  K++ A  L   M +  + PN  TY TL++
Sbjct: 369 ---------------------------CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C  G   R  EL   M   G   + ++YN  I+  CK     EA  L N+    G++ 
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             VTY  L     +     +AL  F  M      AD       I   C + +++
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 7/293 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R+ EA  +   ++  G  P+ IT N ++      G    A N+F EM+      GVV  P
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR----GVV--P 215

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           ++ +Y +++ G  ++G + +A      M      P+  T T ++   C     N A    
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M+D G +PN+++   +++ LCK G +  A  +L+ MV+   +PN +T+  L+DG C  
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335

Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           G   +   LF+ +  S   K +  +Y  +I GYCK  ++  A  L++ +  +G+ P V T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           Y TL +G  +     RA +L   M       +  TY   ID LC + +    Y
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL--FKEMTNGNGEIGVV------ 152
           A  F K + F     V   + L NG  +  H ++   L  F E+   N  +G+V      
Sbjct: 117 AVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQ 176

Query: 153 -FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+++T + +++   + G ++ A+ +F +M    + P+  +Y  ++ G        EA
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
              L  M+ +G  P+  +  +I+  LC+NG ++ A      M+    +PN   + +L+DG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI-KP 330
            C  G I +  E+   M   G K + +++  LI+G CK    E+A  L+ +L      KP
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V TY ++  G  +  +  RA  LF  M+   +  +  TY T I+G C
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y +  D L   G + KA E+   M               +  F      NEA G++++M 
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +QG+ P+ ++ N ++    + G ++ A  + D M    V P++ +Y  ++ G    GKI 
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                   M   G   D+ +  +++   C+N  V  A+  + ++   G KP ++ + +L 
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            GL +    ++A ++  EM  N    +  T+   IDGLC R
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 198/380 (52%), Gaps = 10/380 (2%)

Query: 2   RHMHPSPPP-VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R  HP+  P   S+ +++  L  ++  D  ++L + + + G+  D+ TY  LI   C   
Sbjct: 105 REAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAA 164

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     + G +  S   PNV+ ++ L++G C   R  + + +F ++   G EP+VI + 
Sbjct: 165 ELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFT 224

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
             I+ LC+ G    A+ + K++    G      +PN VTY+++I+ LCKEG V +A  L 
Sbjct: 225 GFIDDLCKKGRIGKAVKV-KDIMVQRG-----LEPNVVTYNVLINCLCKEGSVREALALR 278

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELC 238
            +M  + + P+VVTY +LI G     + + A GLL EM+  D  V+P+VV+ N +++ LC
Sbjct: 279 NEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLC 338

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G+M  A  + ++M +     N  TYN L+ GF    K+N    L   + S G + D F
Sbjct: 339 KIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSF 398

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y+ILING+ K  EV+ A      +  +GI+  +  Y  L   L ++   E+A+ LF EM
Sbjct: 399 TYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM 458

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             N    D   Y T + G C
Sbjct: 459 DMN-CGLDAVAYSTMMYGAC 477



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 191/378 (50%), Gaps = 11/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ LL    ++  +  V  +F+ ++ +G+ PD+  ++  I+  CK G++     +
Sbjct: 183 PNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKV 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNVVT+  LI  LC E  + EA AL  ++   G  P+V+TYNTLI GL  
Sbjct: 243 KDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSG 302

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L +EM  G+     + +P+ VT++ +I GLCK G + +A  +   M     
Sbjct: 303 VLEMDGAMGLLEEMIQGD----TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY  LI GF   +  N A  L+ E++  G++P+  + ++++N   K  ++D A  
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M Q  +R   F Y  L+   C  G + +   LF  M+ M C  D  +Y+ ++ G C
Sbjct: 419 FLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGAC 477

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL---FHGLFEIRQAERALKLFVEMQGNDVAA 365
           K+ +++ A  L  ++  +G+ P  VTY+ L   F  L ++ +AER LK   +M  +    
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLK---QMAASGFVP 534

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D   + + I G     Q+
Sbjct: 535 DVAVFDSLIKGYSAEGQI 552



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 15/301 (4%)

Query: 97  IVEAAALFTKLKAFGCEPNV---ITYNTLINGLCRTGHTI-VALNLFKEMTNGNGEIGVV 152
           + EA +L + L      P+V   ++YN ++  LCR G  +  AL+L  +M+    E    
Sbjct: 60  VTEACSLLSAL------PDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSR---EAHPA 110

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN V+Y++++ GLC     D+A  L   M+   +  +VVTY +LI G C A + + A 
Sbjct: 111 ARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGAL 170

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL EM   GV PNV+  + ++   C++G+  + S++ + M +  V P+   +   +D  
Sbjct: 171 ELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDL 230

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G+I +  ++   M   G + +  +YN+LIN  CK   V EAL+L NE+  KG+ P V
Sbjct: 231 CKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDV 290

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRTFIDGLCVRPQVRFTYARR 390
           VTYNTL  GL  + + + A+ L  EM   D  V  D  T+ + I GLC   ++R   + R
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350

Query: 391 K 391
           +
Sbjct: 351 E 351



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 44/319 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+ CL K       L+L   ++  G+ PD+ TY+ LI     + ++     +
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 69  FGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
              +++  +   P+VVTF S+I GLC   R+ +A ++   +   GC  N++TYN LI G 
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGF 372

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG-------------------- 166
            R     +A+NL  E+ +         +P++ TYSI+I+G                    
Sbjct: 373 LRVHKVNMAMNLMSELISSG------LEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQR 426

Query: 167 ---------------LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
                          LC+ G +++A  LF +M   N   + V Y+++++G C + D   A
Sbjct: 427 GIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDM-NCGLDAVAYSTMMYGACKSGDIKAA 485

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           K LL +M+D+G+ P+ V+ ++++N   K G ++ A R+L  M      P+   +++L+ G
Sbjct: 486 KQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKG 545

Query: 272 FCLTGKINRVKELFVSMES 290
           +   G+IN++ +L   M +
Sbjct: 546 YSAEGQINKILDLIHEMRA 564



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLN-SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           LL  L +    +  + LF  ++ + GL  D   YS ++   CK G +     +   +L  
Sbjct: 438 LLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDE 495

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
             AP+ VT++ LI        + EA  +  ++ A G  P+V  +++LI G    G     
Sbjct: 496 GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKI 555

Query: 136 LNLFKEMTNGNGEIGVVF 153
           L+L  EM   N  I   F
Sbjct: 556 LDLIHEMRAKNVAIDPKF 573


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 199/409 (48%), Gaps = 49/409 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L  L K         L   + S GL P+  TY+IL+  +CKMG +     +
Sbjct: 241 PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   P+V T+  LI GLC E RI EA  L  +++     P+V++YNTLING   
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L +EM+    E GV  KPN VT++I++   CKEG +D A     +M+    
Sbjct: 361 WSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC---------- 238
           +P+ VTY +LI+G+C A +  EA   + EM  + ++ + V+ N I+  LC          
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 239 -------------------------KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                    K+G +D A +L D M + ++ P+  TYN ++ G C
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 274 LTGK----INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
             GK    I+++ EL  S    G   D+ +YN +++GYC+  +VE+A   +N++     K
Sbjct: 535 QCGKTEQAISKLNELLES----GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V T N L  GL      E+ALKLF        A DT TY T I  LC
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 191/342 (55%), Gaps = 12/342 (3%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +G+ P++ T++I+I  +C   +          + +   +P+ VT+ +++  LC + R+ +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  L   +K+ G  PN  TYN L+ G C+ G    A N+ + MT  N        P+  T
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVWT 315

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I+GLC EG +++A +L  +M+   L P+VV+Y +LI+G    +  +EA  LL EM 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++GV+PN V+ N+++   CK GKMD+AS  +  M +    P+  TYNTL++G+C  G + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 280 RVKELFVSMESMGCKH---DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
              E F +M+ MG K+   D  + N ++   C+ K++EEA  L +    +G     V+Y 
Sbjct: 436 ---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TL  G F+    +RALKL+ EM+  ++   T TY   I GLC
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  L      +    L   + ++ L PD+ +Y+ LIN   +  ++S  F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT   ++K  C E ++ +A+   TK++  G  P+ +TYNTLING C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A     EM   N       K ++VT + I+  LC+E  +++A +L    +    
Sbjct: 431 AGNMGEAFRTMDEMGRKN------MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V+Y +LI G+    + + A  L  EM ++ + P+ V+ N I+  LC+ GK + A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ +++  + P+  TYNT++ G+C  G + +  +    M     K D F+ NIL+ G C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +E+AL L+N    KG     VTYNTL   L +  + + A  L  EM+  ++  D  
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   I  L    ++R
Sbjct: 665 TYNAIITALTDSGRIR 680



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 185/386 (47%), Gaps = 19/386 (4%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++LLG +A ++ +D  LS+  RL S    P        I  + + GQ    F IF ++ R
Sbjct: 109 SLLLGFIATDRRHDLHLSIL-RLTS----PSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 75  SCFAPNVVTFTSLIKGLC---AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
               PN++T  +L+  L    +   +  +   F      G  PNV T+N +I G C    
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+     M   N        P+ VTY+ I+D LCK+G +  A++L + MK   L PN
Sbjct: 224 FKDAVEFLNVMGKYN------CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPN 277

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY  L++G+C      EA  ++  M    + P+V + N+++N LC  G+++ A +L D
Sbjct: 278 RNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRD 337

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    + P+  +YNTL++G     KI+   +L   M   G K +  ++NI++  YCK  
Sbjct: 338 EMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++++A +   ++   G  P  VTYNTL +G  +      A +   EM   ++  D+ T  
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 372 TFIDGLCVRPQVRFTY-----ARRKG 392
           T +  LC   ++   Y     AR++G
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRG 483



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 29/404 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + NI++    K    D   +   ++   G  PD  TY+ LIN +CK G +   F  
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R     + VT  ++++ LC E ++ EA  L +  +  G   + ++Y TLI G  +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL L+ EM     E  ++  P+TVTY+ II GLC+ G  ++A     ++    L
Sbjct: 501 DGNVDRALKLWDEMK----EKEII--PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +++HG+C   D  +A     +MV+   +P+V + N+++  LC  G ++ A +
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  V      +  TYNTL+   C  G+++    L   ME      D ++YN +I    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 309 KNKEVEEALSLYNELPFKGIKP-----------------------TVVTYNTLFHGLFEI 345
            +  + EA    +++  KG  P                       + V Y+     L   
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYAR 389
            + + A+++F E +   +  D  TY   +DGL  R +     AR
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 201/431 (46%), Gaps = 61/431 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L +   +D  L ++  +   G+ PD   YS L++   KM        +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL   F  + +TF ++I GLC   ++VEA  +F K+K  GC P+ ITY TLI+G C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 129 TGHTIVALN-----------------------LFK-----EMTNGNGEIGVV-FKPNTVT 159
             +   A                         LFK     E T+   E+G+    PN VT
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +IDG CKEG +DKA   + +M    L+ N++  ++++ G       +EA  L+ +MV
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 220 DQG--------------------------------VQPNVVSSNVIMNELCKNGKMDNAS 247
           D G                                + PN +  N+ +  LCK GK+D+A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R   ++      P+ FTY TL+ G+   G ++    L   M   G   +  +YN LING 
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK++ V+ A  L+++L  KG+ P VVTYNTL  G  +I   + A KL  +M    ++   
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 368 CTYRTFIDGLC 378
            TY   I+GLC
Sbjct: 855 VTYSALINGLC 865



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 5/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L KN    T   +++++  +G+ PD++  SI++N FCK G+V      
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN+VT+ SLI G  +   +  A  +   +   G   NV+TY  LI G C+
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M     E  +V  P+   Y ++IDG C+ G +D A  L  +M    L
Sbjct: 309 QCKMDEAEKVLRGMQE---EAALV--PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+    SLI+G+C   + +EA+G++  MVD  ++P+  S N +++  C+ G    A  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+Q  + P   TYNTL+ G C  G  +   +++  M   G   D+  Y+ L++G  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  E A +L+ ++  +G   + +T+NT+  GL ++ +   A ++F +M+    + D  
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 369 TYRTFIDGLC 378
           TYRT IDG C
Sbjct: 544 TYRTLIDGYC 553



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 192/406 (47%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   +I++    K+   D      K++ ++G+ P++ TY  LIN +  +G V     +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLC 127
              +     + NVVT+T LIKG C + ++ EA  +   ++      P+   Y  LI+G C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           RTG    A+ L  EM      + +  K N    + +I+G CK G + +A+ +  +M   N
Sbjct: 344 RTGKIDDAVRLLDEM------LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  +Y +L+ G+C     +EA  L  +M+ +G++P V++ N ++  LC+ G  D+A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGF----------------------------------- 272
           ++  LM++  V P+   Y+TL+DG                                    
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK+   +E+F  M+ +GC  D  +Y  LI+GYCK   V +A  +   +  + I P++
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI 577

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             YN+L  GLF+ R+      L  EM    +  +  TY   IDG C
Sbjct: 578 EMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+++L    +       L +F  +   G  P L + + L+N   K G+      ++ +++
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    P+V   + ++   C + ++ EAA    K++  G EPN++TY++LING    G   
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNV 192
            A  + K M+    E GV    N VTY+++I G CK+  +D+A+++   M+ E  L P+ 
Sbjct: 279 AAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  LI G+C     ++A  LL EM+  G++ N+   N ++N  CK G++  A  ++  
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV  +++P++++YNTL+DG+C  G  +    L   M   G +    +YN L+ G C+   
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++AL +++ +   G+ P  V Y+TL  GLF++   E A  L+ ++          T+ T
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 373 FIDGLC 378
            I GLC
Sbjct: 513 MISGLC 518



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 180/393 (45%), Gaps = 61/393 (15%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K         +F ++  +G  PD  TY  LI+ +CK   V   F + G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY------------- 119
            R   +P++  + SLI GL    R+VE   L T++   G  PN++TY             
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 120 ----------------------NTLINGLCRTGHTIVALNLFKEMTNG------------ 145
                                 +T+++GL R G    A  L ++M +             
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 146 --------------NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
                         +        PN + Y+I I GLCK G VD A+  F  +  +   P+
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY +LIHG+  A + +EA  L  EM+ +G+ PN+V+ N ++N LCK+  +D A RL  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            + Q  + PN  TYNTL+DG+C  G ++   +L   M   G      +Y+ LING CK+ 
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           ++E ++ L N++   G+   ++ Y TL  G F+
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFK 901



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V ++ +L+    K    D    + + +     L PD   Y +LI+ +C+ G++     + 
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +LR     N+    SLI G C    I EA  + T++  +  +P+  +YNTL++G CR 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           GHT  A NL  +M     E      P  +TY+ ++ GLC+ G  D A +++  M    + 
Sbjct: 416 GHTSEAFNLCDKMLQEGIE------PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ V Y++L+ G     ++  A  L  +++ +G   + ++ N +++ LCK GKM  A  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D M      P+  TY TL+DG+C    + +  ++  +ME          YN LI+G  K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK 589

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           ++ + E   L  E+  +G+ P +VTY  L  G  +    ++A   + EM  N ++A+   
Sbjct: 590 SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 370 YRTFIDGL 377
             T + GL
Sbjct: 650 CSTMVSGL 657



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 161/360 (44%), Gaps = 49/360 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L K++       L   +   GL P++ TY  LI+ +CK G +   F  
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------- 111
           +  +  +  + N++  ++++ GL    RI EA  L  K+   G                 
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 112 -----------CE----PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
                      C+    PN I YN  I GLC+TG    A   F  M +  G     F P+
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF-SMLSLKG-----FVPD 748

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY  +I G    G VD+A  L  +M    L PN+VTY +LI+G C + + + A+ L  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           ++  +G+ PNVV+ N +++  CK G MD A +L D M++  + P+  TY+ L++G C  G
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            I R  +L   M   G       Y  L+ G  K        S YNE+     KP  +  N
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT-------SNYNEMS----KPEALKQN 917



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 183/429 (42%), Gaps = 61/429 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+    +    D  + L   +  +GL  +L+  + LIN +CK G++     +
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++     P+  ++ +L+ G C E    EA  L  K+   G EP V+TYNTL+ GLCR
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 129 TGHTIVALNLFKEMTN---GNGEIGVV--------------------------FKPNTVT 159
            G    AL ++  M        E+G                            F  + +T
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ +I GLCK G + +A+E+F +MK    +P+ +TY +LI G+C A++  +A  +   M 
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            + + P++   N +++ L K+ ++   + LL  M    + PN  TY  L+DG+C  G ++
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG------------ 327
           +    +  M   G   +    + +++G  +   ++EA  L  ++   G            
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 328 --------------------IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                               + P  + YN    GL +  + + A + F  +       D 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 368 CTYRTFIDG 376
            TY T I G
Sbjct: 750 FTYCTLIHG 758



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 50/388 (12%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG----LFPDLYTYSILINCFCKMG 60
           HP+PP + S                 L L +R N+I     +F D    ++L N      
Sbjct: 37  HPAPPELVS-------------RICRLVLLRRCNAISKLNFVFSDDIVDAVLRNLRLN-P 82

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
             SLGF  F    ++ F PNV ++  L+        I+    ++ + +A+         N
Sbjct: 83  TASLGFFQFVSKQQN-FRPNVKSYCKLV-------HILSRGRMYDETRAY--------LN 126

Query: 121 TLINGLCRTGHTIVALNLFKEMTN--GNGEIGVV--FKPNTVTYSIIIDGLCKEGFVDKA 176
            L++ LC+          FK+  N   +  +GV   F  +   + +I+    ++G    A
Sbjct: 127 QLVD-LCK----------FKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNA 175

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             +F  M      P++ +  SL++      + + A  +  +M+  G+ P+V   ++++N 
Sbjct: 176 LYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNA 235

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK+GK+D A+  +  M    V PN  TY++L++G+   G +   K +   M   G   +
Sbjct: 236 FCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRN 295

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
             +Y +LI GYCK  +++EA  +   +  +  + P    Y  L  G     + + A++L 
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            EM    +  +     + I+G C R ++
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEI 383


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 185/370 (50%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++   +   +K    +     F  + S G+ P++  Y+ LI   CK G V+  F +
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  IL      +V T++ LI GL    ++ EA  +F++L+  G  PN  TYN+LI+G C+
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L +EM            P+ VTY+I+IDGLCK G +++AK LF  ++   L
Sbjct: 639 QGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +++ G+C + +   A  LL EM+ +GV P+    NVI+N  CK  K + A  
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++     +  ++NTL++G+C +GK+     L   M       +  +Y  LI+  C
Sbjct: 753 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA  L+ E+  + + PT  TY +L HG   I        LF EM    +  D  
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 369 TYRTFIDGLC 378
           TY   ID  C
Sbjct: 872 TYYVMIDAYC 881



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 190/372 (51%), Gaps = 9/372 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P P++ +N L+    +    +    +   + + G+  +L  ++ L+N  CK G++     
Sbjct: 309 PEPIT-YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   ++     P+  T++ LI+G C    +  A  L  ++K     P V+TY+ +INGLC
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427

Query: 128 RTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           R G+      + +EM  NG        KPN V Y+ ++    KEG V++++ +  +M+ +
Sbjct: 428 RCGNLQGTNAILREMVMNG-------LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+V  Y SLI GFC A    EA+  L+EM+++ ++PN  +    ++   K G+M+ A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R  + M+ C V PN   Y  L++G C  G +     +F  + S     D  +Y++LI+G
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +N ++ EA  +++EL  KG+ P   TYN+L  G  +    ++A +L  EM    +  D
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 367 TCTYRTFIDGLC 378
             TY   IDGLC
Sbjct: 661 IVTYNILIDGLC 672



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 187/370 (50%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++++++  L +  +     ++ + +   GL P+   Y+ L+    K G+V    +I
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+V  + SLI G C   R+ EA     ++      PN  TY   I+G  +
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A   F EM +     GV+  PN   Y+ +I+G CKEG V +A  +F  +    +
Sbjct: 534 AGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V TY+ LIHG       +EA G+  E+ ++G+ PN  + N +++  CK G +D AS+
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M    + P+  TYN L+DG C  G+I R K LF  +E  G   +  +Y  +++GYC
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K    A  L  E+  +G+ P    YN + +   +  + E+AL LF EM     A+ T 
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TV 766

Query: 369 TYRTFIDGLC 378
           ++ T I+G C
Sbjct: 767 SFNTLIEGYC 776



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 189/406 (46%), Gaps = 30/406 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LLG L K    +    +F  + +  + PD+YTY+ +I+  CK+G V     +
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246

Query: 69  F------GRILRSC-----------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
                   R+L                P++ T+  LI G C E R  EA  +  ++   G
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
            +P  ITYN LI+G  R G    A  +  EM      +    + N + ++ +++G+CK G
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEM------VACGIEANLIIWNTLLNGVCKAG 360

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++KA E+  +M  + + P+  TY+ LI G C   +   A  LL EM  + + P V++ +
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           VI+N LC+ G +   + +L  MV   ++PNA  Y TLM      G++   + +   M   
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G   D F YN LI G+CK K +EEA +   E+  + ++P   TY     G  +  + E A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV-------RFTYARR 390
            + F EM    V  +   Y   I+G C    V       RF  +RR
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 166/318 (52%), Gaps = 7/318 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++++L+  L++N        +F  L   GL P+ +TY+ LI+  CK G V     +  
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P++VT+  LI GLC    I  A  LF  ++  G  PN +TY  +++G C++ 
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  L +EM       GV   P+   Y++I++  CKE   +KA +LF +M  E    
Sbjct: 711 NPTAAFQLLEEMLLR----GV--PPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFA 763

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + V++ +LI G+C +    EA  LL EM+++   PN V+   +++  CK G M  A RL 
Sbjct: 764 STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 823

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M + +V P A TY +L+ G+   G ++ V  LF  M + G + D  +Y ++I+ YC+ 
Sbjct: 824 LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCRE 883

Query: 311 KEVEEALSLYNELPFKGI 328
             V EA  L +E+  KG+
Sbjct: 884 GNVMEACKLKDEILVKGM 901



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 29/346 (8%)

Query: 50  SILINCFCKMGQVSLGFVIFGRIL---RSC-FAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           S LI C  +     L   + G I+   RSC  +PN V F  L+        +VEA  +F 
Sbjct: 121 SDLIKCIIRNSDSPLA--VLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFL 178

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
             K F   P++++ N+L+  L +       + LF ++ +G     V+  P+  TY+ +I 
Sbjct: 179 GPKNFEFRPSLLSCNSLLGDLLKGNK----VELFWKVFDGMCAHKVL--PDVYTYTNMIS 232

Query: 166 GLCKEGFVDKAKELFLQMKYE-----------------NLNPNVVTYTSLIHGFCHANDW 208
             CK G V  AK + L+M  +                  L P++ TY  LI+GFC     
Sbjct: 233 AHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 292

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EAK +L+EM+D G++P  ++ N +++   + G ++ A R+ D MV C +  N   +NTL
Sbjct: 293 REAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 352

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++G C  GK+ +  E+   M   G + D  +Y++LI G+C+ + +  A  L +E+  + +
Sbjct: 353 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 412

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            PTV+TY+ + +GL      +    +  EM  N +  +   Y T +
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 52/306 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NIL+  L K    +   +LF  +   GL P+  TY+ +++ +CK    +  F +
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 718

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGL 126
              +L     P+   +  ++   C E +  +A  LF ++  K F    + +++NTLI G 
Sbjct: 719 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA---STVSFNTLIEGY 775

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C++G    A +L +EM      I   F PN VTY+ +ID  CK G + +AK L+L+M+  
Sbjct: 776 CKSGKLQEANHLLEEM------IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK---- 242
           N+ P   TYTSL+HG+ +  + +E   L  EMV +G++P+ ++  V+++  C+ G     
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889

Query: 243 -------------------------------------MDNASRLLDLMVQCDVRPNAFTY 265
                                                MD A+ +L  MV+     N  + 
Sbjct: 890 CKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSL 949

Query: 266 NTLMDG 271
             L+DG
Sbjct: 950 GDLVDG 955



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 36/247 (14%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    +N++L    K + ++  L LF+ +   G F    +++ LI  +CK G++     
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANH 786

Query: 68  IFGRILRSCFAPNVVTFTSLIK-----GLCAESR-------------------------- 96
           +   ++   F PN VT+TSLI      G+  E++                          
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 97  ----IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               + E +ALF ++ A G EP+ +TY  +I+  CR G+ + A  L  E+      +   
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSG 906

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F+    T S+I  G    G +D+A E+   M       N  +   L+ G  +  +  ++ 
Sbjct: 907 FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 966

Query: 213 GLLIEMV 219
            LL +M 
Sbjct: 967 NLLKQMA 973


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 7/376 (1%)

Query: 9    PPVSSFNIL-LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            P  SS+ ++ +GC    K  +    L   +   G  PD  T ++++   C+ G V+    
Sbjct: 816  PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 874

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             F +++   F PN++ FTSLI GLC +  I +A  +  ++   G +PNV T+  LI+GLC
Sbjct: 875  YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 934

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + G T  A  LF ++   +      +KPN  TY+ +I G CKE  +++A+ LF +MK + 
Sbjct: 935  KRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 989

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            L PNV TYT+LI+G C A  +  A  L+  M D+G  PN+ + N  ++ LCK  +   A 
Sbjct: 990  LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 1049

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LL+    C +  +  TY  L+   C    IN+    F  M   G + D    NILI  +
Sbjct: 1050 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 1109

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            C+ K+++E+  L+  +   G+ PT  TY ++     +    + ALK F  M+ +    D+
Sbjct: 1110 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 1169

Query: 368  CTYRTFIDGLCVRPQV 383
             TY + I GLC +  V
Sbjct: 1170 FTYGSLISGLCKKSMV 1185



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 10/376 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + +F  L+  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 886  PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 945

Query: 69   FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F +++RS  + PNV T+TS+I G C E ++  A  LF+++K  G  PNV TY TLING C
Sbjct: 946  FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 1005

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + G    +     E+ N  G+ G  F PN  TY+  ID LCK+    +A EL  +     
Sbjct: 1006 KAG----SFGRAYELMNLMGDEG--FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 1059

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            L  + VTYT LI   C  ND N+A      M   G + ++  +N+++   C+  KM  + 
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 1119

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            RL  L+V   + P   TY +++  +C  G I+   + F +M+  GC  D F+Y  LI+G 
Sbjct: 1120 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 1179

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            CK   V+EA  LY  +  +G+ P  VT  TL +   +   +  A+ L   +   D     
Sbjct: 1180 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWI 1236

Query: 368  CTYRTFIDGLCVRPQV 383
             T RT +  LC   +V
Sbjct: 1237 RTVRTLVRKLCSEKKV 1252



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 44/354 (12%)

Query: 33   LFKRLNSIGLFPDLYTYSIL-INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
            +F  ++  G+ PD  +Y ++ I CF + G++         +++  F P+  T T ++  L
Sbjct: 805  VFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 863

Query: 92   CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
            C    +  A   F K+   G +PN+I + +LI+GLC+ G    A  + +EM   NG    
Sbjct: 864  CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG---- 918

Query: 152  VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNE 210
             +KPN  T++ +IDGLCK G+ +KA  LFL++ + +   PNV TYTS+I G+        
Sbjct: 919  -WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY-------- 969

Query: 211  AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                                       CK  K++ A  L   M +  + PN  TY TL++
Sbjct: 970  ---------------------------CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 1002

Query: 271  GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            G C  G   R  EL   M   G   + ++YN  I+  CK     EA  L N+    G++ 
Sbjct: 1003 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 1062

Query: 331  TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              VTY  L     +     +AL  F  M      AD       I   C + +++
Sbjct: 1063 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 1116



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 142/302 (47%), Gaps = 7/302 (2%)

Query: 87   LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
            +++      R+ EA  +   ++  G  P+ IT N ++      G    A N+F EM+   
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR- 812

Query: 147  GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
               GVV  P++ +Y +++ G  ++G + +A      M      P+  T T ++   C   
Sbjct: 813  ---GVV--PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 867

Query: 207  DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              N A     +M+D G +PN+++   +++ LCK G +  A  +L+ MV+   +PN +T+ 
Sbjct: 868  LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927

Query: 267  TLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
             L+DG C  G   +   LF+ +  S   K +  +Y  +I GYCK  ++  A  L++ +  
Sbjct: 928  ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987

Query: 326  KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
            +G+ P V TY TL +G  +     RA +L   M       +  TY   ID LC + +   
Sbjct: 988  QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 1047

Query: 386  TY 387
             Y
Sbjct: 1048 AY 1049



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 101  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA--LNLFKEMTNGNGEIGVVFK---- 154
            A  F K + F     V   + L NG  +  H ++   L  F E+   N  +G+V      
Sbjct: 718  AVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQ 777

Query: 155  ---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
               P+++T + +++   + G ++ A+ +F +M    + P+  +Y  ++ G        EA
Sbjct: 778  GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837

Query: 212  KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
               L  M+ +G  P+  +  +I+  LC+NG ++ A      M+    +PN   + +L+DG
Sbjct: 838  DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897

Query: 272  FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI-KP 330
             C  G I +  E+   M   G K + +++  LI+G CK    E+A  L+ +L      KP
Sbjct: 898  LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 957

Query: 331  TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             V TY ++  G  +  +  RA  LF  M+   +  +  TY T I+G C
Sbjct: 958  NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 1005



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y +  D L   G + KA E+   M               +  F      NEA G++++M 
Sbjct: 731 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 775

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +QG+ P+ ++ N ++    + G ++ A  + D M    V P++ +Y  ++ G    GKI 
Sbjct: 776 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 835

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                   M   G   D+ +  +++   C+N  V  A+  + ++   G KP ++ + +L 
Sbjct: 836 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 895

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            GL +    ++A ++  EM  N    +  T+   IDGLC R
Sbjct: 896 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 936


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 181/358 (50%), Gaps = 9/358 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           ++ + +   G  PD+ ++ +LI  F K G    G     R+L +   PN + + +LI  L
Sbjct: 15  AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCL 74

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    + EA +   ++    C PNV++YN +I+G C+  +   AL   +EM     E+G 
Sbjct: 75  CKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREME----ELG- 128

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P    YS I+   CK G V KA ++F +M  +   P++V +  L+ G   A   +EA
Sbjct: 129 -HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 187

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + L   M  +G +P+VV+ N ++  LCK  K+D A  LL+ M Q DV P   TY TL+D 
Sbjct: 188 RELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDH 247

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYN--ILINGYCKNKEVEEALSLYNELPFKGIK 329
            C   ++ +  E+F  M    C   + +Y+  ILING CK +   EA  ++ E+  +GI 
Sbjct: 248 LCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGIS 307

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           PTVVTYNTL  GL    + + A++L   M     A +  TY   I  LC   QV   +
Sbjct: 308 PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAF 365



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NI++    K ++ +  L+  + +  +G  P  + YS ++  FCK G VS    +
Sbjct: 96  PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 155

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P++V F  L+ GL    +I EA  LF  + + GC+P+V+TYNT+I GLC+
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 215

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L + M   +        P  VTY+ +ID LCK   + +A E+F +M     
Sbjct: 216 WKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPC 269

Query: 189 NPNVVTYTS--LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
                 Y+   LI+G C A    EAK +  EM  +G+ P VV+ N ++  L    K+ +A
Sbjct: 270 PCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDA 329

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M+     PN FTY  L+   C T ++    +L  +M   G       + +L++ 
Sbjct: 330 MELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 389

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +   +++A  LY E+     +  V + N L  G+      + A     +M    +  D
Sbjct: 390 LARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPD 449

Query: 367 TCTYRTFIDGLC 378
             TY   + GLC
Sbjct: 450 KFTYDKLVVGLC 461



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 183/412 (44%), Gaps = 44/412 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S  +L+    K+  +    S   R+   GLFP+   Y+ LI+C CK G ++     
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESY 86

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ + C APNVV++  +I G C    I +A A   +++  G  P    Y++++   C+
Sbjct: 87  LKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG+   A+++F EM     E      P+ V +++++ GL +   + +A+ELF  M     
Sbjct: 146 TGNVSKAMDVFAEMPAKGCE------PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGC 199

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY ++I G C     +EA  LL  M  + V P  V+   +++ LCK  ++  A  
Sbjct: 200 KPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYE 259

Query: 249 LLDLMVQ-------------------CDVR------------------PNAFTYNTLMDG 271
           + + M +                   C  R                  P   TYNTL++G
Sbjct: 260 VFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
              T K+    EL   M       + F+Y ILI+  CK  +VEEA  L + +  KG  P+
Sbjct: 320 LLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +  +  L   L    + + A +L+ EM   +      +    +DG+  R  V
Sbjct: 380 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSV 431



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 149/309 (48%), Gaps = 17/309 (5%)

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I+ L     + +A A+  ++K  G  P+V ++  LI G  ++G      +    M     
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRML---- 56

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           E G+   PN + Y+ +I  LCK G + +A E +L+   ++  PNVV+Y  +I G+C A +
Sbjct: 57  EAGLF--PNAILYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARN 113

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             +A   L EM + G  P   + + I+   CK G +  A  +   M      P+   +N 
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G     KI+  +ELF SM S GCK D  +YN +I G CK K+++EA+ L   +  + 
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT--FIDGLCVRPQVRF 385
           + PT VTY TL   L +  + ++A ++F +M           Y     I+GLC       
Sbjct: 234 VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLC------- 286

Query: 386 TYARRKGNS 394
             ARR G +
Sbjct: 287 -KARRPGEA 294



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 45/285 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K K  D  + L +R+    + P   TY+ LI+  CK  ++   + +
Sbjct: 201 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEV 260

Query: 69  FGRILRS---CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F ++      C  P       LI GLC   R  EA  +F +++  G  P V+TYNTL+ G
Sbjct: 261 FEKMAEGPCPCTEPAYSVLI-LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK---------------- 169
           L  T     A+ L   M +       V  PN  TY I+I  LCK                
Sbjct: 320 LLSTAKLQDAMELTYFMLDQ------VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRD 373

Query: 170 EGFV-------------------DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           +GFV                   D A EL+ +M   N    V +   L+ G       +E
Sbjct: 374 KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDE 433

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           AK  L +M D G+ P+  + + ++  LC  GK D A +L++ +V+
Sbjct: 434 AKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 478



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 6/217 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P   P  S  IL+  L K +       +F+ +   G+ P + TY+ L+       ++   
Sbjct: 270 PCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDA 329

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +L    APN+ T+  LI  LC   ++ EA  L + ++  G  P++  +  L++ 
Sbjct: 330 MELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 389

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G    A  L+KEM+  N +  V       + +I++DG+ + G VD+AK+   QM  
Sbjct: 390 LARAGRLDDAFELYKEMSRINCQQLVG------SSNILLDGILRRGSVDEAKDFLKQMTD 443

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
             + P+  TY  L+ G C     ++A+ L+ E+V  G
Sbjct: 444 TGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++G L   +     L++  +L      P + TY+ILI      G ++    +
Sbjct: 180 PDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 239

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P++ T+ ++I+G+C E  +  AA L T L + GCEP+VI+YN L+     
Sbjct: 240 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLN 299

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM +   E      PN VTYSI+I  LC+ G +D+A  +   M  + L
Sbjct: 300 QGKWDEGEKLVAEMFSRGCE------PNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +Y  LI   C     + A G++  M+  G  P++V+ N I+  LCKNG  + A  
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + +      PN  +YNT++      G  +R   +  +M S G   D+ +YN LI+  C
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  VEEA+ L +++   G +PTV++YN +  GL ++R+ + A+ +F EM       +  
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 533

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 534 TYILLIEGI 542



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 176/335 (52%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ +I+ FCK+ Q+     +  R+    F P++VT+  +I  LC   ++  A  +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L    C P VITY  LI      G    A+ L +EM      +     P+  TY+ I
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM------LARGLLPDMYTYNAI 258

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG V++A EL   +  +   P+V++Y  L+  F +   W+E + L+ EM  +G 
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN V+ +++++ LC+ G++D A  +L +M++ ++ P+ ++Y+ L+   C  G+++    
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +   M S GC  D  +YN ++   CKN    +AL ++N+L   G  P V +YNT+   L+
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL +   M    +  D  TY + I  LC
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 180/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K    +    +  R+ + G  PD+ TY+I+I   C   ++ L   +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+    E  I EA  L  ++ A G  P++ TYN +I G+C+
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   +T+   E      P+ ++Y+I++     +G  D+ ++L  +M     
Sbjct: 265 EGMVERAAELITSLTSKGCE------PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+ LI   C     +EA  +L  M+++ + P+  S + +++ LCK G++D A  
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++D M+     P+   YNT++   C  G  N+  E+F  +  MGC  +  SYN +I+   
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +   AL +   +  KGI P  +TYN+L   L      E A+ L  +M+ +       
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498

Query: 369 TYRTFIDGLC 378
           +Y   + GLC
Sbjct: 499 SYNIVLLGLC 508



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 42/327 (12%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+N  CK G+ +        ++   + P+V+  T LIKG      I +A+ +   L++  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-- 141

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
                              HT                     +P+   Y+ +I G CK  
Sbjct: 142 -------------------HT---------------------EPDVFAYNAVISGFCKVN 161

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++ A ++  +MK     P++VTY  +I   C+      A  +L +++     P V++  
Sbjct: 162 QIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYT 221

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           +++      G ++ A +LL+ M+   + P+ +TYN ++ G C  G + R  EL  S+ S 
Sbjct: 222 ILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 281

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GC+ D  SYNIL+  +    + +E   L  E+  +G +P  VTY+ L   L    + + A
Sbjct: 282 GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 341

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +   M   ++  DT +Y   I  LC
Sbjct: 342 ISVLKVMIEKELTPDTYSYDPLISALC 368



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP VSS+N ++  L         L +   + S G+ PD  TY+ LI+C C+ G V     
Sbjct: 424 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIG 483

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +S F P V+++  ++ GLC   RI +A  +F ++   GC PN  TY  LI G+ 
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 543

Query: 128 RTGHTIVALNL 138
             G    A+ L
Sbjct: 544 FAGWRTEAMEL 554



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  CK GK + +   L+ +V     P+      L+ GF     I +   +   +ES  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D F+YN +I+G+CK  ++E A  + N +  +G  P +VTYN +   L   R+   AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +  ++  ++      TY   I+   V 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVE 230


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 186/376 (49%), Gaps = 22/376 (5%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL     +D    + K +   G  PD  TYS +I   C+  +V   F++F  +      P
Sbjct: 262 CLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           +V T+T LI   C    I +A + F ++++ GC  NV+TY  L++   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM---------------- 183
             M +          PNT+TYS ++DGLCK G + KA E++ ++                
Sbjct: 382 NRMIDAG------CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGK 435

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
             +++ PNVVTY +LI G C A+   +A+ LL  M+  G +PN +  + +++  CK GK+
Sbjct: 436 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKI 495

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           DNA  +   M +C   P   TY +L+D      +++   ++   M    C  +  +Y  +
Sbjct: 496 DNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAM 555

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G C+  E ++AL L + +  KG  P VVTY  L  GL +  + + +L+LF++M     
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615

Query: 364 AADTCTYRTFIDGLCV 379
           A +  TYR  I+  C 
Sbjct: 616 APNYVTYRVLINHCCA 631



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 184/361 (50%), Gaps = 10/361 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L +    +    LF+ + S+G+ PD+YTY+ILI+ FCK G +      
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     + NVVT+T+L+       ++ +A+ +F ++   GC PN ITY+ L++GLC+
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF----------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  ++ ++   +  +G  F           PN VTY  +IDGLCK   V  A+E
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC     + A+ + + M   G  P V +   +++ + 
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+ ++D A ++L  MV+    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G  K+ +V+ +L L+ ++  KG  P  VTY  L +        + A  L  EM
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645

Query: 359 Q 359
           +
Sbjct: 646 K 646



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 183/426 (42%), Gaps = 83/426 (19%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++  LL    K K       +F R+   G  P+  TYS L++  CK G++     ++ 
Sbjct: 358 VVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYT 417

Query: 71  RILRSC----------------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
           +++ +                  APNVVT+ +LI GLC   ++V+A  L   + + GCEP
Sbjct: 418 KLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEP 477

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFK----------- 154
           N I Y+ LI+G C+ G    A  +F  M+              I  +FK           
Sbjct: 478 NHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVL 537

Query: 155 ---------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                    PN VTY+ +IDGLC+ G   KA +L   M+ +  +PNVVTYT+LI G   +
Sbjct: 538 SQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKS 597

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ---------- 255
              + +  L I+M  +G  PN V+  V++N  C  G +D A  LL  M Q          
Sbjct: 598 GKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGY 657

Query: 256 CDV-----------------------RPNAFTYNTLMDGFCLTGKINRVKELFVSM---- 288
           C V                        P A  Y  L+D F   G++    EL   M    
Sbjct: 658 CSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS 717

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S+     D  Y  LI   C   ++E+A  LY+E+  KG+ P +  +  L  GL ++ + 
Sbjct: 718 SSLNITSKDM-YTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKW 776

Query: 349 ERALKL 354
             AL+L
Sbjct: 777 NEALQL 782



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 162/363 (44%), Gaps = 42/363 (11%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           +H     P V ++  L+  L K         L   + S G  P+   Y  LI+ FCK+G+
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +     +F R+ +  + P V T+TSLI  +  + R+  A  + +++    C PNV+TY  
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+GLCR G    AL L   M     E G    PN VTY+ +IDGL K G VD + +LF+
Sbjct: 555 MIDGLCRIGECQKALKLLSMME----EKGC--SPNVVTYTALIDGLGKSGKVDLSLQLFI 608

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM--------------VDQGVQPNV 227
           QM  +   PN VTY  LI+  C A   +EA  LL EM              V QG     
Sbjct: 609 QMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKF 668

Query: 228 VSSNVIMNEL-------------------CKNGKMDNASRLLDLMVQCDVRPNAFT---Y 265
           ++S  ++ EL                    K G+++ A  L   M++     N  +   Y
Sbjct: 669 IASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMY 728

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            +L+   CL  ++ +  EL+  +   G   +   +  LI G  K  +  EAL L   +  
Sbjct: 729 TSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICD 788

Query: 326 KGI 328
           +G+
Sbjct: 789 EGV 791



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 168/405 (41%), Gaps = 53/405 (13%)

Query: 36  RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAES 95
            L   G  P   TY+ L+      GQ+ +GF +   +  S F  +  T     + LC E 
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R  +A  +  + + F  + + +    +I+GL        A++    M   N  I     P
Sbjct: 90  RWSDALVMIER-EDF--KLDTVLCTQMISGLMEASLFDEAISFLHRM-RCNSCI-----P 140

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N VTY  ++ G  K+  +   K +   M  E  NPN   + SL+H +C+A D+  A  LL
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200

Query: 216 IEMVDQGVQPNVVSSNVIMNE--------------------------------------- 236
             M D G  P  V+ N+ +                                         
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260

Query: 237 --LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LC  GK D A +++ +M+     P+  TY+ ++   C   K+ +   LF  M+S+G  
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D ++Y ILI+ +CK   +E+A S ++E+   G    VVTY  L H   + +Q  +A  +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT---YARRKGNSGN 396
           F  M       +T TY   +DGLC   +++     Y +  G S N
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDN 425



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 181/426 (42%), Gaps = 54/426 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N L+  LA     D    + K ++  G   D +T        CK G+ S   V+
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I R  F  + V  T +I GL   S   EA +   +++   C PNV+TY TL+ G  +
Sbjct: 98  ---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 129 T---GHTIVALNLF-KEMTNGNGEI--------------GVVFK-----------PNTVT 159
               G     +N+  KE  N N  +                 +K           P  V 
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214

Query: 160 YSIIIDGLC------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           Y+I I  +C          +  A++++ +M   +   N V   +     C    ++ A  
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           ++  M+ +G  P+  + + ++  LC+  K++ A  L   M    V P+ +TY  L+D FC
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I + +  F  M S+GC  +  +Y  L++ Y K K++ +A  ++N +   G  P  +
Sbjct: 335 KAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTI 394

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQG----------------NDVAADTCTYRTFIDGL 377
           TY+ L  GL +  + ++A +++ ++ G                + +A +  TY   IDGL
Sbjct: 395 TYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGL 454

Query: 378 CVRPQV 383
           C   +V
Sbjct: 455 CKAHKV 460


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/297 (36%), Positives = 172/297 (57%), Gaps = 12/297 (4%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTG-HTIVALNLFKE 141
            T+ IKG+C    I  A     K+  A G + +  +Y TLINGLC+ G  T  AL L ++
Sbjct: 107 LTTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQ 166

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                      F+P+ V Y+ +ID +CK+ FV+ A +L+ +M    ++PNVVTYT+LI G
Sbjct: 167 ----------AFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDG 216

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           FC      EA GL  +M+ + + PNV + N +++  CK GK++ A  +L+ M++ D++ +
Sbjct: 217 FCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSD 276

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
              Y++LM+G+CL  ++ + + +F +M      +D  SYNI+IN +CK K V+EA+ L+ 
Sbjct: 277 VVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFE 336

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E+P K I P VVTY+TL  GL +  +   A++L  EM       +  TY   +D LC
Sbjct: 337 EMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLC 393



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 163/291 (56%), Gaps = 16/291 (5%)

Query: 22  AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNV 81
           A N HY  V++        G   D Y+Y  LIN  CK+G  +   +   ++LR  F P+V
Sbjct: 123 ALNFHYKVVVAR-------GFDVDHYSYGTLINGLCKVGGDTRAAL---QLLRQAFEPDV 172

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V +T++I  +C ++ + +A  L+ ++ A G  PNV+TY  LI+G C  G    AL LFK+
Sbjct: 173 VMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKK 232

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M + N        PN  T++ ++D  CKEG +++AK +   M  ++L  +VV Y+SL++G
Sbjct: 233 MISEN------INPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNG 286

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +C  N+  +A+ +   M ++ +  +V S N+++NE CK   +D A +L + M    + P+
Sbjct: 287 YCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD 346

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
             TY+TL+DG C +G+++   EL   M+  G   +  +Y  +++  CKN +
Sbjct: 347 VVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHD 397



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 122/232 (52%), Gaps = 6/232 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  ++  + K+   +    L+  + + G+ P++ TY+ LI+ FC +G++     +
Sbjct: 170 PDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGL 229

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++     PNV TF  L+   C E +I EA  +   +     + +V+ Y++L+NG C 
Sbjct: 230 FKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCL 289

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++FK M             +  +Y+I+I+  CK   VD+A +LF +M  + +
Sbjct: 290 VNEVFKAQSIFKTMAERE------LSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQI 343

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            P+VVTY +LI G C +   + A  L+ EM D+G  PN+++   I++ LCKN
Sbjct: 344 FPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 4/189 (2%)

Query: 196 TSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           T+ I G C   D   A     ++V  +G   +  S   ++N LCK G    A+  L L+ 
Sbjct: 108 TTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA--LQLLR 165

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           Q    P+   Y T++D  C    +N   +L+  M + G   +  +Y  LI+G+C   ++E
Sbjct: 166 QA-FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLE 224

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EAL L+ ++  + I P V T+N L     +  + E A  +   M   D+ +D   Y + +
Sbjct: 225 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 284

Query: 375 DGLCVRPQV 383
           +G C+  +V
Sbjct: 285 NGYCLVNEV 293


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 7/373 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S +IL+    +N        LF ++  +G  P + TYS LI  FCK G +  GF +
Sbjct: 410 PNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYL 469

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++    P+ + ++ LI GLC +  + +A   F +    G  PNV T NTL++  CR
Sbjct: 470 YEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCR 529

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A+ ++  M   N       K +TVTY+I+I G  + G VD+A  LF QM  ++ 
Sbjct: 530 LKCIVGAMKVYYLMGMLN------IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TY +LI G C     +    +   M    V P++   NV++N   + G ++ A  
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALG 643

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   +V+   +P+ FT+NT++  +C   +++   +LF  M S   + +  ++ ILI+ +C
Sbjct: 644 LFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ-AERALKLFVEMQGNDVAADT 367
           +   +++A+ +++++  +G +P +VTY+ L HG F+ +   E  LKL+ EM  N++A + 
Sbjct: 704 REGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNI 763

Query: 368 CTYRTFIDGLCVR 380
            +Y   IDGLC R
Sbjct: 764 VSYSILIDGLCKR 776



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P V +F+ L+    K  + D    LF  +   G+ PDL  YSILI+   K G++      
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 64  -------------LGFV-----------------IFGRILRSCFAPNVVTFTSLIKGLCA 93
                        +GF                  I+ R+L    +PNVV+ + LIKG C 
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             RI+EA  LF ++   G EP+++TY+ LI G C++G+      L+++M     E     
Sbjct: 425 NGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCE----- 479

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+T+ YS++I+GLCK+G V  A   F Q     L+PNV T  +L+  FC       A  
Sbjct: 480 -PDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMK 538

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M    ++ + V+  +++    + G++D A  L   M++ D +P+  TY TL+DG C
Sbjct: 539 VYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLC 598

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K +    +F  M       D   YN+LIN + +   +E AL L+  +  +G KP V 
Sbjct: 599 KLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVF 658

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           T+NT+       ++ + A++LF +M    +  +  T+   ID  C
Sbjct: 659 TFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 178/342 (52%), Gaps = 6/342 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +  IG  P++ T+S LI+ +CK G +   FV+F  +  +   P+++ ++ LI GL  
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             R+ +   L       G + +V+ +++ ++   + G     + ++K M N         
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG------I 408

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN V+ SI+I G C+ G + +A  LF+Q+      P+++TY++LI GFC + +  +   
Sbjct: 409 SPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFY 468

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M+ +  +P+ +  +V++N LCK G + +A R     V   + PN FT NTL+D FC
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFC 528

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               I    +++  M  +  K D  +Y ILI G  +   V+EAL L+ ++  K  KP V+
Sbjct: 529 RLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVI 588

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           TY TL  GL +++++   L +F  M  N VA D   Y   I+
Sbjct: 589 TYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLIN 630



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           +LLG L  +   + ++  +  L S         Y  ++N F   G+V +G      +++ 
Sbjct: 207 LLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQG 266

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
            F  +++T   ++KG+  ++ I  A   F  +   G +PNV+T++TLI+  C+ G+   A
Sbjct: 267 GFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKA 326

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             LF  M  GNG       P+ + YSI+IDGL K G ++  + L L    + +  +VV +
Sbjct: 327 FVLFDVMA-GNG-----VTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGF 380

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           +S +  +    D      +   M+++G+ PNVVS ++++   C+NG++  A  L   +++
Sbjct: 381 SSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
               P+  TY+ L+ GFC +G +     L+  M    C+ D   Y++LING CK   V +
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           AL  + +   +G+ P V T NTL      ++    A+K++  M   ++ ADT TY   I 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 376 G 376
           G
Sbjct: 561 G 561



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N LL    + K     + ++  +  + +  D  TY+ILI    + G+V    ++
Sbjct: 515 PNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+  F P+V+T+ +LI GLC   +      +F  +      P++  YN LIN   R
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL LF  +           KP+  T++ +I   C    +D A +LF +M  E L
Sbjct: 635 EGHLEAALGLFVHVVERGP------KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQL 688

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNAS 247
            PN +T+T LI  FC     ++A  +  +M+++G +PN+V+ + +++   K+   M++  
Sbjct: 689 RPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L + M++ ++ PN  +Y+ L+DG C  G +      F          D  +Y ILI GY
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           CK   + EA+ LY+ +    + P      TL
Sbjct: 809 CKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 48/102 (47%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P P  V+   ++ G        ++ L L+  +    + P++ +YSILI+  CK G +   
Sbjct: 723 PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEA 782

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
              F   L     P+V+ +T LI+G C   R+ EA  L+  +
Sbjct: 783 SCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 183/356 (51%), Gaps = 9/356 (2%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           +N+  D+   +F R++  G  P+  TYS LIN  C  G+V+        + R    P V 
Sbjct: 275 RNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           TFT+ I  LC   RI +A  +F  +K  GC+PNV TY +LI+G      + +A+ LF  M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRM 391

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           +      GVV  PNTVTY+ +++ L +   +D A  +F  M      PN  +Y  LI G+
Sbjct: 392 SRD----GVV--PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C   D  +A  +L  M+     P +V+ N+I+   C +G  D A R+L+LM     +P+ 
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
           ++Y  L+ GFC   K+     +F  M   G   ++ +Y  LI+GYCK+++++ A  +   
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   G +P V TYN L HGL +      A +L   M    ++ D  TY T I+GLC
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 182/366 (49%), Gaps = 9/366 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  LL  L K     TV+  + ++   GL P+L  Y+ +IN  CK G V     I  ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +S   P+  T+TS+I G C    +  A  +F ++   GCEPN  TY+TLINGLC +G  
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+   EMT      GV+  P   T++  I  LC  G ++ A ++F+ MK +   PNV
Sbjct: 315 NEALDFISEMTRH----GVL--PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNV 368

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYTSLI G         A GL   M   GV PN V+ N +MN L +N ++D+A  + ++
Sbjct: 369 YTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNM 425

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    PN  +YN L+ G+C  G   +   +  +M          +YNI+I GYC + +
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            + A+ +   +   G +P   +Y  L  G  +I + E A  +F EM    +  +  TY  
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545

Query: 373 FIDGLC 378
            I G C
Sbjct: 546 LISGYC 551



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 184/371 (49%), Gaps = 10/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F   +  L      +    +F  +   G  P++YTY+ LI+   ++ ++++G  +
Sbjct: 331 PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIG--L 387

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+ R    PN VT+ +L+  L     I  A  +F  +   GC PN  +YN LI G C 
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+++   M  G         P  VTY+III G C  G  D A  +   MK    
Sbjct: 448 IGDTEKAMSMLTNMLKGRP------TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +YT LI GFC  +    A G+  EM+D+G+ PN V+   +++  CK+ K+D A+R
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M +   RPN  TYN L+ G       +  +EL   M       D  +Y+ +ING C
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            N  +  AL ++N++   G  P + TY++L   L +  + E A ++F E++   +  D  
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 369 TYRTFIDGLCV 379
           TY   I+ +CV
Sbjct: 682 TYVKMIE-VCV 691



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L +N   D+ L +F  +   G  P+  +Y+ LI  +C +G       +
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+    P +VT+  +IKG C       A  +   +KA GC+P+  +Y  LI+G C+
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                +A  +F EM +          PN VTY+ +I G CK+  +D A  +  +MK    
Sbjct: 518 ISKMELASGMFNEMMDRG------LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  LIHG    N+++ A+ L   M+++ + P+VV+ + ++N LC NG +  A  
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + MV+    PN  TY++L+      G++   +E+F  ++  G   D+ +Y  +I    
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            + +V+ A     E+   G +PT+ TY+ L  GL
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 6/348 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            + LF R++  G+ P+  TY+ L+N   +  ++    ++F  + +    PN  ++  LI+
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIR 443

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C      +A ++ T +      P ++TYN +I G C +G T VA+ +  E+   NG  
Sbjct: 444 GYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL-ELMKANG-- 500

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
               +P+  +Y+ +I G CK   ++ A  +F +M    L PN VTYT+LI G+C     +
Sbjct: 501 ---CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLD 557

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  +L  M   G +PNV + NV+++ L K      A  L  +M++  + P+  TY+T++
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G C  G I    E+F  M   GC  +  +Y+ LI    +   VEEA  +++EL  +G+ 
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           P  VTY  +        + +RA     EM          TY   I GL
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 187/416 (44%), Gaps = 33/416 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++     +   D  + + + + + G  PD ++Y+ LI+ FCK+ ++ L   +
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN VT+T+LI G C + ++  AA +  ++K  GC PNV TYN LI+GL +
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  L K M            P+ VTYS +I+GLC  G +  A E+F +M     
Sbjct: 588 QNNFSGAEELCKVMLEEK------ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC-KNGKMDNAS 247
            PN+ TY+SLI          EA+ +  E+  QG+ P+ V+  V M E+C  +GK+D A 
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTY-VKMIEVCVMSGKVDRAF 700

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGF-----------------CLTGKINRVKELFVSMES 290
             L  M+    +P   TY+ L+ G                    T     + +  +S+ S
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760

Query: 291 MGCKHDDFS-----YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                 DF      Y+ L++   ++    EA +LY  +  +   P   TY      L   
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV---RPQVRFTYARRKGNSGNTN 398
            + + A+ +F  M           Y+  I  LC    R + RF + +    + N +
Sbjct: 821 LKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 11/311 (3%)

Query: 71  RILRSCFAPNVV--TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           R+L S   P  V      +IK    ++ + +A          G +  + TY TL+  L +
Sbjct: 146 RLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNK 205

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T   ++ + ++           +PN + Y+ +I+ LCK+G V  A+ +  ++    +
Sbjct: 206 LNMTSTVMDRYHQILREG------LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGM 259

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYTS+I G+C   D + A  +   M ++G +PN  + + ++N LC +G+++ A  
Sbjct: 260 KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD 319

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M +  V P   T+   +   C  G+I    ++F+ M+  GCK + ++Y  LI+G  
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-- 377

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +    A+ L++ +   G+ P  VTYN L + L E  + + AL +F  M  +    +T 
Sbjct: 378 -QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTS 436

Query: 369 TYRTFIDGLCV 379
           +Y   I G C 
Sbjct: 437 SYNELIRGYCT 447


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 3   HM--HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           HM  H   P + +  +LL  LAK +  + V  ++K++  +G+ P+++ +++LI+  CK G
Sbjct: 152 HMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSG 211

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     +   +      P++ T+ +LI   C +    EA  +  +++  G  P+++TYN
Sbjct: 212 DVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYN 271

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI G CR G    AL LF+E+            PN VTY+ +IDG C+   +++A  L 
Sbjct: 272 SLIYGFCREGRMREALRLFREINGAT--------PNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M+ E L+P VVTY S++   C      +A  LL EM ++ V+P+ V+ N ++N  CK 
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G M +A ++   M++  ++P+ FT+  L+ GFC   +++  KE    M   G      +Y
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + L++ Y      E  + L +EL  KG+   +  Y  L   L +I + E A ++F  MQG
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQG 503

Query: 361 NDVAADTCTYRTF 373
             +  D+  Y + 
Sbjct: 504 KGMKGDSVVYTSL 516



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 200/400 (50%), Gaps = 14/400 (3%)

Query: 4   MHPSPPPVSS-FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P   S   + L+   A ++     + +F+ +   G  P L+  ++L+N   K    
Sbjct: 119 IHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           ++ + ++ +++R    PN+  F  LI   C    + +A  L  ++++    P++ TYNTL
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+  C+ G    AL +   M  G    GV   P+ VTY+ +I G C+EG + +A  LF +
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERG----GV--SPDIVTYNSLIYGFCREGRMREALRLFRE 292

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +      PN VTYT+LI G+C  ND  EA  L   M  +G+ P VV+ N I+ +LC+ GK
Sbjct: 293 IN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A+RLL+ M +  V P+  T NTL++ +C  G +    ++   M   G K D F++  
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G+CK  EV+ A     E+   G  P+  TY+ L    ++    E  ++L  E+    
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKG 470

Query: 363 VAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
           +  D   YR  I  LC   ++      FT  + KG  G++
Sbjct: 471 LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDS 510



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 159/362 (43%), Gaps = 43/362 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN+L+    K+   +    L   + S  +FPDL+TY+ LI+ +CK G       I
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ R   +P++VT+ SLI G C E R+ EA  LF ++   G  PN +TY TLI+G CR
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCR 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L +E+    G       P  VTY+ I+  LC+EG +  A  L  +M    +
Sbjct: 313 VNDLEEALRL-REVMEVEG-----LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 189 NPNVVT-----------------------------------YTSLIHGFCHANDWNEAKG 213
            P+ VT                                   + +LIHGFC  ++ + AK 
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            L EM+D G  P+  + + +++        +   RL D + +  +  +   Y  L+   C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              KI   + +F  M+  G K D   Y  L   Y K  +   A  + +E+  + +  T+ 
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLK 546

Query: 334 TY 335
            Y
Sbjct: 547 IY 548


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 9/380 (2%)

Query: 1   MRHM--HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +RH+      P V     L+  L  +K  D  + +   L + G  PDL  Y+ +I  FC+
Sbjct: 80  LRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCR 138

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             ++   + +  R+    F+P++VT+  LI  LC+   +  A     +L    C+P V+T
Sbjct: 139 ANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVT 198

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y  LI      G    A+ L  EM   N       +P+  TY+ II G+C+EG+VD+A +
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLEIN------LQPDMFTYNSIIRGMCREGYVDRAFQ 252

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +   +  +   P+V+TY  L+ G  +   W     L+ +MV +G + NVV+ +V+++ +C
Sbjct: 253 IISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVC 312

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           ++GK++    LL  M +  ++P+ + Y+ L+   C  G+++   E+   M S GC  D  
Sbjct: 313 RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIV 372

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN ++   CK K  +EALS++ +L   G  P   +YN++F  L+      RAL + +EM
Sbjct: 373 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEM 432

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               V  D  TY + I  LC
Sbjct: 433 LDKGVDPDGITYNSLISCLC 452



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 162/336 (48%), Gaps = 8/336 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+         D  + L   +  I L PD++TY+ +I   C+ G V   F I
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I    +AP+V+T+  L++GL  + +      L + + A GCE NV+TY+ LI+ +CR
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L K+M           KP+   Y  +I  LCKEG VD A E+   M  +  
Sbjct: 314 DGKVEEGVGLLKDMKKKG------LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V Y +++   C     +EA  +  ++ + G  PN  S N + + L   G    A  
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME--SMGCKHDDFSYNILING 306
           ++  M+   V P+  TYN+L+   C  G ++   EL V ME  S  CK    SYNI++ G
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            CK   V +A+ +   +  KG +P   TY  L  G+
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 176/371 (47%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NIL+G L      D+ L    +L      P + TY+ILI      G +     +
Sbjct: 159 PDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKL 218

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P++ T+ S+I+G+C E  +  A  + + + + G  P+VITYN L+ GL  
Sbjct: 219 LDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLN 278

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  +M     E       N VTYS++I  +C++G V++   L   MK + L
Sbjct: 279 QGKWEAGYELMSDMVARGCE------ANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  LI   C     + A  +L  M+  G  P++V+ N I+  LCK  + D A  
Sbjct: 333 KPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + + +    PNA +YN++      TG   R   + + M   G   D  +YN LI+  C
Sbjct: 393 IFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLC 452

Query: 309 KNKEVEEALSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           ++  V+EA+ L  ++  +    KP+VV+YN +  GL ++ +   A+++   M       +
Sbjct: 453 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPN 512

Query: 367 TCTYRTFIDGL 377
             TY   I+G+
Sbjct: 513 ETTYTFLIEGI 523



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 9/303 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL  L     ++    L   + + G   ++ TYS+LI+  C+ G+V  G  +
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGL 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+   +  LI  LC E R+  A  +   + + GC P+++ YNT++  LC+
Sbjct: 324 LKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL++F+++    GE+G    PN  +Y+ +   L   G   +A  + L+M  + +
Sbjct: 384 QKRADEALSIFEKL----GEVGC--SPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           +P+ +TY SLI   C     +EA  LL+  EM     +P+VVS N+++  LCK  ++ +A
Sbjct: 438 DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDA 497

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L  MV    RPN  TY  L++G    G +N  ++L  ++ +M     + S+  L   
Sbjct: 498 IEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI-SEHSFERLYKT 556

Query: 307 YCK 309
           +CK
Sbjct: 557 FCK 559



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 14/320 (4%)

Query: 71  RILRSCFAPNVVTF----TSLIKGL---CAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           R L S   P   T     T L+K L   C      E+      L   G +P+V+    LI
Sbjct: 40  RTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLI 99

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +GL  +     A+ +   + N          P+ + Y+ II G C+   +D A ++  +M
Sbjct: 100 HGLFTSKTIDKAIQVMHILENHG-------HPDLIAYNAIITGFCRANRIDSAYQVLDRM 152

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K +  +P++VTY  LI   C     + A     +++ +  +P VV+  +++      G +
Sbjct: 153 KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGI 212

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D A +LLD M++ +++P+ FTYN+++ G C  G ++R  ++  S+ S G   D  +YNIL
Sbjct: 213 DEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNIL 272

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           + G     + E    L +++  +G +  VVTY+ L   +    + E  + L  +M+   +
Sbjct: 273 LRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332

Query: 364 AADTCTYRTFIDGLCVRPQV 383
             D   Y   I  LC   +V
Sbjct: 333 KPDGYCYDPLIAALCKEGRV 352


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 195/409 (47%), Gaps = 43/409 (10%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF----------------------- 43
           S P VSSFNILL   A    ++ V +L + + S G+                        
Sbjct: 124 SEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAV 183

Query: 44  ------------PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
                       P L+TY++L++  CK  +V     +F  ++R  + P+++ ++SLI GL
Sbjct: 184 SYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGL 243

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
               R+ EA  L   + A G  P  + Y +++ GLC+ G    A+   +EM        V
Sbjct: 244 SKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 303

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
                  TYS I+ G    G V+KA  +  +M   +  P+ ++YT  I          EA
Sbjct: 304 D------TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 357

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + +   MV++G +P++ +  +I++  CK G M  A+ +L LM +  V+PN + Y  +MDG
Sbjct: 358 EKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 417

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG--IK 329
           F  + ++    EL+  +   G      +YN +IN  CK K+++EAL L  E+  +   ++
Sbjct: 418 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELE 477

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P++VTY+ + HGL ++   ERA  L  EM  N V  D  TY + I  L 
Sbjct: 478 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLA 526



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 166/337 (49%), Gaps = 10/337 (2%)

Query: 8   PPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PPP + ++  ++  L K       +   + +    L P + TYS ++  +  MG+V   F
Sbjct: 264 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAF 323

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +     AP+ +++T  I+ L +  R  EA  +F  +   GC+P++ TY  +I+  
Sbjct: 324 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 383

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A ++ + M           KPN   Y++I+DG  K   +++A EL+ ++  +
Sbjct: 384 CKEGSMAAATHVLRLMDKA------AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD 437

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELCKNGKMD 244
            + P+ VTY ++I+  C     +EA  LL EM    + ++P++V+ ++I++ L K G  +
Sbjct: 438 GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 497

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL  M+   V P+ FTY +L+      GK++R  EL   M   G   DD +Y  L+
Sbjct: 498 RAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
              C++ +V+ A  L  E+   G  P   T+  +  G
Sbjct: 558 QILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKG 593



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 136/266 (51%), Gaps = 5/266 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+ + +  L      +    +F+ +   G  PD++TY I+I+ FCK G ++    +
Sbjct: 336 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 395

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   PN   +T ++ G    SR+ EA  L+ ++   G  P+ +TYNT+IN LC+
Sbjct: 396 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 455

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L +EM     E+    +P+ VTYS+II GL K G  ++A +L  +M    +
Sbjct: 456 LKKMDEALELLREMQRRKEEL----EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 511

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYTSLI     A   + A  LL EM+  G+ P+  +   ++  LC++  +D A  
Sbjct: 512 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWD 570

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCL 274
           LL  M++    PN FT+  +  GF L
Sbjct: 571 LLQEMMRNGHTPNEFTFKAVEKGFRL 596



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 26/294 (8%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN---------------GNGEIGVV--- 152
           G    + T N+L+  L R GH   AL  F+   +                  +  VV   
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNAL 150

Query: 153 --------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                      N  T+ +I+  LC    +DKA   F  +      P + TYT L+ G C 
Sbjct: 151 LREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCK 210

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A+    A  +  EM+ +G +P++++ + +++ L K G++D A +L+DLMV     P A  
Sbjct: 211 AHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVA 270

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y +++ G C  G+I    +    M     +    +Y+ ++ GY    +VE+A ++  E+ 
Sbjct: 271 YTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMA 330

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +   P  ++Y      L+ I + E A K+F  M       D  TY   ID  C
Sbjct: 331 DRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 3   HM--HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           HM  H   P + +  +LL  LAK +  + V  ++K++  +G+ P+++ +++LI+  CK G
Sbjct: 152 HMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSG 211

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V     +   +      P++ T+ +LI   C +    EA  +  +++  G  P+++TYN
Sbjct: 212 DVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYN 271

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +LI G CR G    AL LF+E+            PN VTY+ +IDG C+   +++A  L 
Sbjct: 272 SLIYGFCREGRMREALRLFREINGAT--------PNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M+ E L+P VVTY S++   C      +A  LL EM ++ V+P+ V+ N ++N  CK 
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G M +A ++   M++  ++P+ FT+  L+ GFC   +++  KE    M   G      +Y
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + L++ Y      E  + L +EL  KG+   +  Y  L   L +I + E A ++F  MQG
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQG 503

Query: 361 NDVAADTCTYRTF 373
             +  D+  Y + 
Sbjct: 504 KGMKGDSVVYTSL 516



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 200/400 (50%), Gaps = 14/400 (3%)

Query: 4   MHPSPPPVSS-FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +H  P   S   + L+   A ++     + +F+ +   G  P L+  ++L+N   K    
Sbjct: 119 IHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
           ++ + ++ +++R    PN+  F  LI   C    + +A  L  ++++    P++ TYNTL
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+  C+ G    AL +   M  G    GV   P+ VTY+ +I G C+EG + +A  LF +
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERG----GV--SPDIVTYNSLIYGFCREGRMREALRLFRE 292

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +      PN VTYT+LI G+C  ND  EA  L   M  +G+ P VV+ N I+ +LC+ GK
Sbjct: 293 IN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A+RLL+ M +  V P+  T NTL++ +C  G +    ++   M   G K D F++  
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G+CK  EV+ A     E+   G  P+  TY+ L    ++    E  ++L  E+    
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKG 470

Query: 363 VAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
           +  D   YR  I  LC   ++      FT  + KG  G++
Sbjct: 471 LFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDS 510



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 159/362 (43%), Gaps = 43/362 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN+L+    K+   +    L   + S  +FPDL+TY+ LI+ +CK G       I
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+ R   +P++VT+ SLI G C E R+ EA  LF ++   G  PN +TY TLI+G CR
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCR 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L +E+    G       P  VTY+ I+  LC+EG +  A  L  +M    +
Sbjct: 313 VNDLEEALRL-REVMEVEG-----LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 189 NPNVVT-----------------------------------YTSLIHGFCHANDWNEAKG 213
            P+ VT                                   + +LIHGFC  ++ + AK 
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            L EM+D G  P+  + + +++        +   RL D + +  +  +   Y  L+   C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              KI   + +F  M+  G K D   Y  L   Y K  +   A  + +E+  + +  T+ 
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLK 546

Query: 334 TY 335
            Y
Sbjct: 547 IY 548


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 201/423 (47%), Gaps = 54/423 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++F+IL+  L K+ +    L LF  +   G+ PD +TY ++I+  C+  +V   + +
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++  S   P+ VT  +L+ G C   R+ EA +L    +  G   +V  Y+ LI GL R
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    L+++M   N       KP+   Y+I++ GL + G V  A EL  +M    +
Sbjct: 314 AKRYEDVQLLYRKMIEDN------VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V Y  LI GFC     +EA+ L +E+      PNV + +++++ +C+NG   +A  
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME-----------SMGCKH-- 295
           + + M +    P+A T+N+L+DG C TG++ +   LF  ME           S G  H  
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487

Query: 296 -----------------------------------DDFSYNILINGYCKNKEVEEALSLY 320
                                                ++YNIL+NG+CK      A  L+
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            E+ FKG+ P  VTY TL +GL   ++ E A K+F +M+ N    D   YRT +  +C R
Sbjct: 548 REMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRR 607

Query: 381 PQV 383
            ++
Sbjct: 608 MEL 610



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 19/380 (5%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
            +F +L+    K    D  +  F  +      PD+YTY+++++   +   + L   ++ R
Sbjct: 127 DAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTR 186

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +++    PNV TF+ LI GLC    + +A  LF ++   G  P+  TY  +I+GLCR+  
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  LF +M +    +G    P+ VT + +++G C    VD+A  L    + +    +
Sbjct: 247 VDDAYRLFDKMKDSG--VG----PDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           V  Y+ LI G   A  + + + L  +M++  V+P+V    ++M  L + GK+ +A  LL+
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  V P+   YN L+ GFC  G ++  + L + +    C  +  +Y+ILI+G C+N 
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM------------- 358
              +A  ++NE+   G  P+ VT+N+L  GL +  Q E+A  LF +M             
Sbjct: 421 LTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLS 480

Query: 359 QGNDVAADTCTYRTFIDGLC 378
           QG     D+ + +  ++ LC
Sbjct: 481 QGPSHVLDSASLQKMVEQLC 500



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 22/382 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  ++ L+  L + K Y+ V  L++++    + PD+Y Y+I++    + G+V     +  
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P+ V +  LIKG C    + EA +L  ++    C PNV TY+ LI+G+CR G
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A  +F EM     ++G    P+ VT++ +IDGLCK G ++KA  LF +M+    NP
Sbjct: 421 LTRDAQEIFNEME----KLGCY--PSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR-NP 473

Query: 191 NV--------------VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           ++               +   ++   C +   ++A  +L+++ D G  P + + N+++N 
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G  + A +L   M    + P+  TY TL++G     +     ++F  ME  GC  D
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              Y  ++   C+  E+  A SL+ +   + I+           G FE ++ E+A++  +
Sbjct: 594 AAVYRTMMTWMCRRMELPRAFSLWLKY-LRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLL 652

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
           EM       D   Y  ++ GLC
Sbjct: 653 EMDFKLNDFDLGPYAIWLIGLC 674



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 176/359 (49%), Gaps = 10/359 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + I++  LA+       L L   +   G+ PD   Y++LI  FC MG +S    +
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393

Query: 69  FGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              I R  CF PNV T++ LI G+C      +A  +F +++  GC P+ +T+N+LI+GLC
Sbjct: 394 QLEISRHDCF-PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452

Query: 128 RTGHTIVALNLFKEMTNGNG-------EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +TG    A  LF +M  G           G     ++ +   +++ LC  G + KA  + 
Sbjct: 453 KTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRIL 512

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           +Q+      P + TY  L++GFC   ++N A  L  EM  +G+ P+ V+   ++N L + 
Sbjct: 513 MQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRF 572

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            + ++A ++ D M +    P+A  Y T+M   C   ++ R   L++         +D + 
Sbjct: 573 QREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAI 632

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
              I GY + +EVE+A+    E+ FK     +  Y     GL + R+   ALK+F+ ++
Sbjct: 633 KA-IEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILE 690



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 172/388 (44%), Gaps = 25/388 (6%)

Query: 2   RHM-HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI--GLFP--DLYTYSILINCF 56
           RH  HP PP V S +     + +    D V ++ K +N +   L P     +  I+ +  
Sbjct: 9   RHFSHPKPPWVQSLHT--SAIQETSISDEVFTVIKTMNPMEPALEPMVPFLSPKIVTSII 66

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTS-----LIKGLCAESRIVEA-AALFTKLKAF 110
                  LGF  F       +A N   F +     LI  L      +E        LK  
Sbjct: 67  QNPPNPQLGFRFF------IWASNFKRFRAWESCDLITDLLINQNGLELYCQTLEALKNG 120

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G + +   +  LI    + G T  A+  F  M + +        P+  TY++I+D L ++
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDC------TPDVYTYNMILDVLIQK 174

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
            F+  A  ++ +M   N  PNV T++ LI G C + +  +A  L  EM  +G+ P+  + 
Sbjct: 175 NFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            V+++ LC++ ++D+A RL D M    V P+  T N L++GFC+  +++    L    E 
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D   Y+ LI G  + K  E+   LY ++    +KP V  Y  +  GL E  +   
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRD 354

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           AL+L  EM  + V  DT  Y   I G C
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFC 382



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 26/302 (8%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +++IL+  + +N        +F  +  +G +P   T++ LI+  CK GQ+  
Sbjct: 400 HDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEK 459

Query: 65  GFVIF-----GR----ILRSCFAPNVV----TFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++F     GR     LR    P+ V    +   +++ LC    I +A  +  +L   G
Sbjct: 460 AHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSG 519

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             P + TYN L+NG C+ G+   A  LF+EM            P+TVTY  +I+GL +  
Sbjct: 520 DAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG------LSPDTVTYGTLINGLLRFQ 573

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
             + A ++F QM+     P+   Y +++   C   +   A  L ++ + + ++     + 
Sbjct: 574 REEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL-RNIRSQEDEAI 632

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT---YNTLMDGFCLTGKINRVKELFVSM 288
             +    +  +++ A R L   ++ D + N F    Y   + G C T ++    ++F+ +
Sbjct: 633 KAIEGYFEKQEVEKAVRGL---LEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLIL 689

Query: 289 ES 290
           E 
Sbjct: 690 EE 691



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 35/143 (24%)

Query: 276 GKINRVKELFVSMESMGCKHDDFSYN---------------------------------- 301
           G  ++  E F SM    C  D ++YN                                  
Sbjct: 140 GLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATF 199

Query: 302 -ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ILI+G CK+  V++AL L++E+  +GI P   TY  +  GL   ++ + A +LF +M+ 
Sbjct: 200 SILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKD 259

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
           + V  D  T    ++G C+  +V
Sbjct: 260 SGVGPDFVTCNALLNGFCMLDRV 282


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 179/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL   A+    D +   FK +   G  P ++TY+I+I+C CK G +     +
Sbjct: 96  PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+ VT+ S+I G     R+ +    F ++K+  CEP+VITYNTLIN  C+
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L  F+EM           KPN V+YS ++D  CKE  + +A + ++ M+   L
Sbjct: 216 FGKLPKGLEFFREMKQSG------LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL 269

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYTSL+  +C   + ++A  L  EM   GV+ NVV+   +++ LC   ++  A  
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   MV   V PN  +Y  L+ GF     ++R  EL   M+  G K D   Y   I   C
Sbjct: 330 LFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             +++E A  + NE+  KGIK     Y TL    F+       L L  EM   D+     
Sbjct: 390 GLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAV 449

Query: 369 TYRTFIDGLC 378
           T+   IDGLC
Sbjct: 450 TFCVLIDGLC 459



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L   L +   ++  L  F ++    +FP   + + L++ F ++G+       
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +   P V T+  +I  +C E  I  A+ LF ++K  G  P+ +TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     +  F+EM + + E      P+ +TY+ +I+  CK G + K  E F +MK   L
Sbjct: 181 VGRLDDTVYFFEEMKSMSCE------PDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y++L+  FC  +   +A    ++M   G+ PN  +   +++  CK G + +A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR 294

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M Q  V  N  TY  L+DG C   +I   +ELF  M + G   +  SY  LI+G+ 
Sbjct: 295 LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFV 354

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K ++ AL L +E+  +GIKP ++ Y T    L  + + E A  +  EMQ   + A+T 
Sbjct: 355 KAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTF 414

Query: 369 TYRTFIDG 376
            Y T +D 
Sbjct: 415 IYTTLMDA 422



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 42/386 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K    D  +  F+ + S+   PD+ TY+ LINCFCK G++  G   
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEF 225

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +S   PNVV++++L+   C E  + +A   +  ++  G  PN  TY +L++  C+
Sbjct: 226 FREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCK 285

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L  EM+    ++GV +  N VTY+ +IDGLC    + +A+ELF +M    +
Sbjct: 286 IGNLSDAFRLADEMS----QVGVEW--NVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ +YT+LIHGF  A + + A  LL EM  +G++P+++     +  LC   K++ A  
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399

Query: 249 LLDLMVQCDVRPNAFTYNTLMD-----------------------------------GFC 273
           +++ M +  ++ N F Y TLMD                                   G C
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459

Query: 274 LTGKINRVKELFVSME-SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
               +++  + F  +    G + +   Y  +I+G CK  +VE A +L+ ++  KG+ P  
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEM 358
             Y +L  G  +     +AL L  +M
Sbjct: 520 TAYTSLIDGKLKQGNVVQALALRDKM 545



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 41/340 (12%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P    F +L   L  E    EA   F+K+K     P   + N L++   R G T 
Sbjct: 56  RNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTD 115

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                FK+M      IG   KP   TY+I+ID +CKEG ++ A  LF +MK+  L P+ V
Sbjct: 116 GMKRFFKDM------IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTV 169

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY S+I G+      ++      EM     +P+V++ N ++N  CK GK+         M
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM 229

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CK---- 294
            Q  ++PN  +Y+TL+D FC    + +  + +V M  +G               CK    
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNL 289

Query: 295 HDDF----------------SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            D F                +Y  LI+G C  + ++EA  L+ ++   G+ P + +Y  L
Sbjct: 290 SDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTAL 349

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            HG  + +  +RAL+L  EM+G  +  D   Y TFI  LC
Sbjct: 350 IHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 126/319 (39%), Gaps = 65/319 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++ L+    K       L  +  +  +GL P+ +TY+ L++ +CK+G +S  F +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRL 295

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--------------------- 107
              + +     NVVT+T+LI GLC   RI EA  LF K+                     
Sbjct: 296 ADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVK 355

Query: 108 --------------KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE----- 148
                         K  G +P+++ Y T I  LC       A  +  EM     +     
Sbjct: 356 AKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFI 415

Query: 149 ----IGVVFKPN--------------------TVTYSIIIDGLCKEGFVDKAKELFLQMK 184
               +   FK                       VT+ ++IDGLCK   V KA + F ++ 
Sbjct: 416 YTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRIS 475

Query: 185 YE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
            +  L  N   YT++I G C  +    A  L  +M  +G+ P+  +   +++   K G +
Sbjct: 476 NDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNV 535

Query: 244 DNASRLLDLMVQCDVRPNA 262
             A  L D M +  V   A
Sbjct: 536 VQALALRDKMAEIGVESGA 554



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 10/232 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++S+  L+    K K+ D  L L   +   G+ PDL  Y   I   C + ++    V+
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N   +T+L+          E   L  ++     E   +T+  LI+GLC+
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCK 460

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++ F  ++N  G      + N   Y+ +IDGLCKE  V+ A  LF QM  + L
Sbjct: 461 NKLVSKAIDYFGRISNDFG-----LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGL 515

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            P+   YTSLI G     +  +A  L  +M + GV+     S     +LC+N
Sbjct: 516 VPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE-----SGARFGDLCQN 562


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 192/378 (50%), Gaps = 10/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+++  + K    D  + +F+ +      PD+YTY  L++  CK  ++     +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + +  CF P+ VTF  LI GLC +  +   A L   +   GC PN +TYNTLI+GLC
Sbjct: 227 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++L   M +          PN VTY  II+GL K+G       +   M+   
Sbjct: 286 LKGKLEKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + N   Y++LI G        EA  L  EM  +  + N +  + +++ LC++GK D A 
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M     +PNA+TY++LM GF   G  ++  E++  M       ++  Y++LI+G 
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAA 365
           CK+ +V+EA+ ++ ++  KG KP VV Y ++ +GL      E AL+L+ EM  Q  D   
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQP 519

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY   ++ LC +  +
Sbjct: 520 DVVTYNILLNALCKQSSI 537



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 164/308 (53%), Gaps = 6/308 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            +PNV+TF  +IK +C    + +A  +F  +    C+P+V TY TL++GLC+      A+
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L  EM     +I   F P+ VT++++I+GLCK+G + +  +L   M  +   PN VTY 
Sbjct: 225 SLLDEM-----QIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYN 278

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LIHG C      +A  LL  MV     PNVV+   I+N L K G+  + +R+L LM + 
Sbjct: 279 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
               N + Y+ L+ G    GK     +LF  M    C+ +   Y+ +I+G C++ + +EA
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           L + +E+     KP   TY++L  G FE     +A++++ +M  ++   +   Y   I G
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 377 LCVRPQVR 384
           LC   +V+
Sbjct: 459 LCKDGKVK 466



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 191/410 (46%), Gaps = 63/410 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS-LGFV 67
           P V ++  L+  L K    D  +SL   +   G FP   T+++LIN  CK G ++ +  +
Sbjct: 202 PDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKL 261

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +    L+ C APN VT+ +LI GLC + ++ +A +L  ++ +  C PNV+TY T+INGL 
Sbjct: 262 VDNMFLKGC-APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 320

Query: 128 RTGHTI-----------------------------------VALNLFKEMTNGNGEIGVV 152
           + G  +                                    A+ LFKEMT    E+   
Sbjct: 321 KQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECEL--- 377

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              NT+ YS +IDGLC++G  D+A E+  +M      PN  TY+SL+ GF  A + ++A 
Sbjct: 378 ---NTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAI 434

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  +M       N V  +V+++ LCK+GK+  A  +   M+    +P+   Y ++++G 
Sbjct: 435 EMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494

Query: 273 CLTGKINRVKELFVSM--ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
              G +    +L+  M  +    + D  +YNIL+N  CK   +  A+ L N +  +G  P
Sbjct: 495 SNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDP 554

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +VT       L E        KL     G          R F+DGL VR
Sbjct: 555 DLVTCIIFLRTLRE--------KLDPPQDG----------REFLDGLVVR 586



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 11/308 (3%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTG 130
           ++  CF   VV F +  K    E    +A  LF ++   F C+  V ++N+++N + + G
Sbjct: 93  VVEKCF---VVIFKAYGKAHLPE----KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEG 145

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL  +  +    G  GV   PN +T++++I  +CK G VD A ++F  M      P
Sbjct: 146 LFYRALEFYNHVI---GAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQP 202

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V TY +L+ G C A+  +EA  LL EM   G  P+ V+ NV++N LCK G +   ++L+
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M      PN  TYNTL+ G CL GK+ +   L   M S  C  +  +Y  +ING  K 
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
               +   +   +  +G       Y+ L  GLF+  +++ A++LF EM   +   +T  Y
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382

Query: 371 RTFIDGLC 378
              IDGLC
Sbjct: 383 SAVIDGLC 390



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 4/232 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K    T+  +ID     G     +++  +M+ E        +  +   +  A+   +A 
Sbjct: 56  YKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAV 115

Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC---DVRPNAFTYNTL 268
           GL   M  +   +  V S N ++N + + G    A    + ++     ++ PN  T+N +
Sbjct: 116 GLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLV 175

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   C  G ++   ++F  M    C+ D ++Y  L++G CK   ++EA+SL +E+   G 
Sbjct: 176 IKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGC 235

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            P+ VT+N L +GL +     R  KL   M     A +  TY T I GLC++
Sbjct: 236 FPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLK 287


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 196/379 (51%), Gaps = 6/379 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+ P + + N +L  L K + +D V  LF  + S G+ P L TY+ L+N     G ++  
Sbjct: 120 PTLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKA 179

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           + ++ +++     PNVVT++++I  LC E  ++EA  LF  +K  G +PN+ TYN L++ 
Sbjct: 180 WEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSS 239

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+       L L++E+       G+V  PN V  + +I G      +   K  FL+M  
Sbjct: 240 HCKRDGVNRTLTLYQELLKS----GLV--PNAVIITTLIGGFFLANRISDVKNAFLEMHR 293

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + P V  Y SLI G   +    EA  +  +M   G+ P+  + ++I+  LC  G++  
Sbjct: 294 YGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQV 353

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+R L+LM Q  +  NA  YN L+D  C  G +         M  +G + +  +Y+ LI+
Sbjct: 354 ATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLID 413

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+ K +++E A+ +Y E+  KG++P V+TY  + HG  +    + A +L  EM    +++
Sbjct: 414 GHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISS 473

Query: 366 DTCTYRTFIDGLCVRPQVR 384
           +  T    +DGLC   +V+
Sbjct: 474 NAITVSVLVDGLCRESRVQ 492



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 46/400 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L +         LF  +   G+ P+LYTY+ L++  CK   V+    +
Sbjct: 193 PNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L+S   PN V  T+LI G    +RI +    F ++  +G  P V  YN+LI+G  R
Sbjct: 253 YQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFR 312

Query: 129 TGHTIVALNLFKEMTN--------------------GNGEIGVVFKP---------NTVT 159
           +G+   AL ++++MT                     G  ++   F           N   
Sbjct: 313 SGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAA 372

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +ID  CK+G + +A     +M    + PNVVTY+SLI G         A G+ +EMV
Sbjct: 373 YNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMV 432

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +GV+PNV++   +++   K G +D A RL   M +  +  NA T + L+DG C   ++ 
Sbjct: 433 AKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQ 492

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +F+   +   K  D      IN +C N   EE  S+ N           VTY TL 
Sbjct: 493 DAV-MFIMKYAGQKKPGD------INSFCSNYTTEEDCSILNS----------VTYMTLI 535

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +GL+   Q   A K F  M+ +D+  D+ TY   I G C+
Sbjct: 536 YGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCM 575



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 23/328 (7%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H +   P V  +N L+    ++ +    L++++ +  +GL PD +T SI++   C  GQV
Sbjct: 292 HRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQV 351

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            +       + +S    N   + +LI   C +  + EA A  T++   G EPNV+TY++L
Sbjct: 352 QVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSL 411

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G  +     +A+ ++ EM     E      PN +TY+ +I G  K G +D A  L  +
Sbjct: 412 IDGHSKKRKMEIAMGIYMEMVAKGVE------PNVLTYTAMIHGHAKFGDLDAAFRLHKE 465

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  + ++ N +T + L+ G C  +   +A   +++   Q    ++       N  C N  
Sbjct: 466 MAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDI-------NSFCSNYT 518

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            +    +L          N+ TY TL+ G  + G+ +   + F  M       D F+Y++
Sbjct: 519 TEEDCSIL----------NSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSL 568

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKP 330
           LI G C    V  A+ LY ++   G+KP
Sbjct: 569 LIRGQCMLGYVLNAMMLYADMVKIGVKP 596



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           V++  L + G  D+A   L +  +    P     N ++DG     + +RV +LF  M S 
Sbjct: 98  VLVIALSQMGLHDDA---LSVFCRLPTLPALPACNAILDGLVKARRFDRVWKLFDEMLSR 154

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G      +YN L+N      ++ +A  ++N++  + I P VVTY+T+   L E      A
Sbjct: 155 GMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEA 214

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            +LF+ M+   V  +  TY   +   C R  V  T
Sbjct: 215 ERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRT 249


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 193/375 (51%), Gaps = 10/375 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L          +L  ++   GL  D+ TY  ++N  CKMG       +
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  +   P+VV ++++I  LC +    +A  LF+++   G  PNV TYN +I+G C 
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++M      I     P+ +T++ +I    KEG + +A++L  +M +  +
Sbjct: 128 FGRWSDAQRLLRDM------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY S+I+GFC  N +++AK     M D    P+VV+ N I++  C+  ++D   +
Sbjct: 182 FPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 237

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +  +  N  TYNTL+ GFC    +N  ++LF  M S G   D  + NIL+ G+C
Sbjct: 238 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 297

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N+++EEAL L+  +    I    V YN + HG+ +  + + A  LF  +  + V  D  
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 357

Query: 369 TYRTFIDGLCVRPQV 383
           TY   I G C +  +
Sbjct: 358 TYNVMISGFCGKSAI 372



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 191/367 (52%), Gaps = 10/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++  L K+ H+     LF  +   G+ P+++TY+ +I+ FC  G+ S    +
Sbjct: 78  PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 137

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+V+TF +LI     E ++ EA  L  ++      P+ +TYN++I G C+
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 197

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F  M +          P+ VT++ IID  C+   VD+  +L  ++    L
Sbjct: 198 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N  TY +LIHGFC  ++ N A+ L  EM+  GV P+ ++ N+++   C+N K++ A  
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 307

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +++    +  +   YN ++ G C   K++   +LF S+   G + D  +YN++I+G+C
Sbjct: 308 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 367

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + +A  L++++   G +P   TYNTL  G  +  + +++++L  EM+ N  + D  
Sbjct: 368 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 427

Query: 369 TYRTFID 375
           T +   D
Sbjct: 428 TIKMVAD 434



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 128/236 (54%), Gaps = 6/236 (2%)

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           EIG+   P  +T++ +I+GLC EG V +A  L  +M  + L+ +VVTY ++++G C   D
Sbjct: 3   EIGLT--PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
              A  LL +M +  ++P+VV  + I++ LCK+G   +A  L   M++  + PN FTYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++DGFC  G+ +  + L   M       D  ++N LI+   K  ++ EA  L +E+  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           I P  VTYN++ +G  +  + + A  +F  M   DV     T+ T ID  C   +V
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRV 232



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 2/170 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   + NILL    +N+  +  L LF+ +    +  D   Y+I+I+  CK  +V  
Sbjct: 280 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 339

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +F  +      P+V T+  +I G C +S I +A  LF K+K  G EP+  TYNTLI 
Sbjct: 340 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 399

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           G  + G    ++ L  EM   NG  G  F    V   +I DG   + F D
Sbjct: 400 GCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA-DLITDGRLDKSFSD 447



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV+ G+ P V++ N ++N LC  G++  A+ L++ MV   +  +  TY T+++G C  G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                 L   ME    K D   Y+ +I+  CK+    +A  L++E+  KGI P V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +  G     +   A +L  +M   ++  D  T+   I
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 157



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV+  + P   T+NTL++G CL G++     L   M   G   D  +Y  ++NG CK  +
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            + AL+L +++    IKP VV Y+ +   L +      A  LF EM    +A +  TY  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 373 FIDGLCVRPQVRFTYARR 390
            IDG C     R++ A+R
Sbjct: 121 MIDGFCSFG--RWSDAQR 136


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 6/345 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           +L+  +   G  P +Y +++L++ FCK G V    ++F  I +    P VV+F +LI G 
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGC 293

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    + E   L   +++ G  P+V T++ LINGLC+ G       LF EM  G G +  
Sbjct: 294 CKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC-GRGLV-- 350

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PN VT++ +IDG CK G VD A + F  M  + + P++VTY +LI+G C   D  EA
Sbjct: 351 ---PNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + L+ EM   G++P+ ++   +++  CK+G M++A  +   MV+  +  +   +  L+ G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G+++    +   M S G K DD +Y ++I+ +CK  +V+    L  E+   G  P 
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           VVTYN L +GL +  Q + A  L   M    VA +  TY   +DG
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 179/334 (53%), Gaps = 6/334 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP +  FN+L+    K         +F  +   GL P + +++ LI+  CK G V  GF 
Sbjct: 245 PPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + G +      P+V TF++LI GLC E R+ E + LF ++   G  PN +T+ TLI+G C
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC 364

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   +AL  F+ M      +    +P+ VTY+ +I+GLCK G + +A+ L  +M    
Sbjct: 365 KGGKVDLALKNFQMM------LAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG 418

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +T+T+LI G C   D   A  +   MV++G++ + V+   +++ LC+ G++ +A 
Sbjct: 419 LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAG 478

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  M+    +P+  TY  ++D FC  G +    +L   M+S G      +YN L+NG 
Sbjct: 479 RMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGL 538

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           CK  +++ A  L + +   G+ P  +TYN L  G
Sbjct: 539 CKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 163/302 (53%), Gaps = 6/302 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN L+    K+   +    L   + S G+ PD++T+S LIN  CK G++  G ++
Sbjct: 281 PTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLL 340

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTFT+LI G C   ++  A   F  + A G  P+++TYN LINGLC+
Sbjct: 341 FDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 400

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EMT          KP+ +T++ +IDG CK+G ++ A E+  +M  E +
Sbjct: 401 VGDLKEARRLVNEMTASG------LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGI 454

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T+LI G C     ++A  +L +M+  G +P+  +  ++++  CK G +    +
Sbjct: 455 ELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFK 514

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M      P   TYN LM+G C  G++   K L  +M ++G   +D +YNIL++G+ 
Sbjct: 515 LLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHS 574

Query: 309 KN 310
           K+
Sbjct: 575 KH 576



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 164/324 (50%), Gaps = 6/324 (1%)

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   + ++  +L S + P +  F  L+ G C    +  A  +F ++   G  P V+++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G C++G       L   M +     GV   P+  T+S +I+GLCKEG +D+   LF
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESE----GVC--PDVFTFSALINGLCKEGRLDEGSLLF 341

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L PN VT+T+LI G C     + A      M+ QGV+P++V+ N ++N LCK 
Sbjct: 342 DEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A RL++ M    ++P+  T+ TL+DG C  G +    E+   M   G + DD ++
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI+G C+   V +A  +  ++   G KP   TY  +     +    +   KL  EMQ 
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
           +       TY   ++GLC + Q++
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMK 545



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 6/291 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I  + AL+ ++   G  P +  +N L++G C+ G    A  +F E+           +P 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPT 282

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V+++ +I G CK G V++   L   M+ E + P+V T+++LI+G C     +E   L  
Sbjct: 283 VVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFD 342

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  +G+ PN V+   +++  CK GK+D A +   +M+   VRP+  TYN L++G C  G
Sbjct: 343 EMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 402

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +   + L   M + G K D  ++  LI+G CK+ ++E AL +   +  +GI+   V + 
Sbjct: 403 DLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFT 462

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            L  GL    +   A ++  +M       D  TY   ID  C +  V+  +
Sbjct: 463 ALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGF 513



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 29/262 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+  L K    D    LF  +   GL P+  T++ LI+  CK G+V L    
Sbjct: 316 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKN 375

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P++VT+ +LI GLC    + EA  L  ++ A G +P+ IT+ TLI+G C+
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCK 435

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
            G    AL + + M     E+  V                             FKP+  T
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++ID  CK+G V    +L  +M+ +   P VVTY +L++G C       AK LL  M+
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAML 555

Query: 220 DQGVQPNVVSSNVIMNELCKNG 241
           + GV PN ++ N++++   K+G
Sbjct: 556 NVGVAPNDITYNILLDGHSKHG 577



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 166/327 (50%), Gaps = 12/327 (3%)

Query: 53  INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           ++ +C M    L F+   R+L    A ++V+F    KG  + S +  ++ L T  +    
Sbjct: 119 LHSYCTM----LHFLCLHRMLPQ--AHSLVSFLVSRKGTNSASTLF-SSILRTMPRHHHH 171

Query: 113 EPNV-ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             +V + ++ LI+    +G T  A+  F+ +T     + +    N +   + +    +  
Sbjct: 172 HHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRL----RPV 227

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++++  L+L++      P +  +  L+HGFC A D   A+ +  E+  +G++P VVS N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +++  CK+G ++   RL  +M    V P+ FT++ L++G C  G+++    LF  M   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G   +  ++  LI+G CK  +V+ AL  +  +  +G++P +VTYN L +GL ++   + A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +L  EM  + +  D  T+ T IDG C
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCC 434



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F  L+  L +         +   + S G  PD  TY+++I+CFCK G V +GF +   +
Sbjct: 460 AFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P VVT+ +L+ GLC + ++  A  L   +   G  PN ITYN L++G  + G +
Sbjct: 520 QSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSS 579

Query: 133 IVALNLFKEMTNGNGEIGVV 152
            V +++F      N E G+V
Sbjct: 580 -VDVDIF------NSEKGLV 592


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 190/394 (48%), Gaps = 29/394 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L K+   D V      +   G++ DL TY+ L+N +C+ G VS  F +  
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD 283

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P + T+ +LI GLC E     A  +  ++   G  PN  T+N ++   CR  
Sbjct: 284 CMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKE 343

Query: 131 HTIVALNLFKEMT------------------NGNGEIG-----------VVFKPNTVTYS 161
               A  +F EM                   + NGE+G           V   P+TV Y+
Sbjct: 344 DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+G C+   V  A ++  +M       +VVTY +L++G C     ++A  L  EMV++
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV P+  +   +++  CK+G M  A  L + M    ++P+  TYNTLMDGFC  G++ + 
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           KEL+  M S        S++ILING+C    V EA  L++E+  KGIKPT+VT NT+  G
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
                   +A      M    V  D  TY T I+
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLIN 617



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 191/350 (54%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ ++G  ++N      L+ F+++  +GL PD   Y+ILIN +C+   VS    +
Sbjct: 362 PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM 421

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      +VVT+ +L+ GLC    + +A  LF ++   G  P+  T  TLI+G C+
Sbjct: 422 RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK 481

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+LF+ MT  +       KP+ VTY+ ++DG CK G ++KAKEL+  M    +
Sbjct: 482 DGNMTKALSLFETMTLRS------LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ ++++ LI+GFC     +EA  L  EM ++G++P +V+ N I+    + G +  A+ 
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ M+   V P+  TYNTL++ F      +R   L  +ME  G   +  +YN ++ G+ 
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS 655

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++  ++EA  + +++  KGI P   TY +L +G       + A ++  EM
Sbjct: 656 RHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 190/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN +L    + +       +F  +   G+ PDL ++S ++  F + G++      
Sbjct: 327 PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+ V +T LI G C    +  A  +  ++   GC  +V+TYNTL+NGLCR
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LFKEM     E GV   P+  T + +I G CK+G + KA  LF  M   +L
Sbjct: 447 GKMLDDADELFKEMV----ERGVF--PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +L+ GFC   +  +AK L  +M+ + + P+ +S ++++N  C  G +  A R
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M +  ++P   T NT++ G+   G +++  +   +M S G   D  +YN LIN + 
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  + A  L N +  +G+ P +VTYN +  G     + + A  +  +M    +  D  
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680

Query: 369 TYRTFIDGLCVRPQVR 384
           TY + I+G   +  ++
Sbjct: 681 TYTSLINGYVSKDNMK 696



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K   Y+    +   +  +GL P+  T++ ++   C+   V     +
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV 351

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+    P++++F+S++        +  A A F K+K  G  P+ + Y  LING CR
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +  EM     E G V   + VTY+ +++GLC+   +D A ELF +M    +
Sbjct: 412 NDDVSGALKMRNEMV----ERGCVM--DVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T T+LIHG+C   +  +A  L   M  + ++P+VV+ N +M+  CK G+M+ A  
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+  ++ P+  +++ L++GFC  G ++    L+  M+  G K    + N +I GY 
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + +A    N +  +G+ P  +TYNTL +   +    +RA  L   M+   +  +  
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645

Query: 369 TYRTFIDG 376
           TY   + G
Sbjct: 646 TYNAILGG 653



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +++ N LLG + K    D    +++     G   ++YT +I++N  CK G++    V   
Sbjct: 189 INACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLS 248

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +       ++VT+ +L+   C    + EA  L   +   G +P + TYN LINGLC+ G
Sbjct: 249 EMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEG 308

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +  EM      +GV   PN  T++ ++   C++  V +A+ +F +M    + P
Sbjct: 309 SYERAKRVLDEM------LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP 362

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++++++S++  F    +   A     +M   G+ P+ V   +++N  C+N  +  A ++ 
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + MV+     +  TYNTL++G C    ++   ELF  M   G   D ++   LI+GYCK+
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + +ALSL+  +  + +KP VVTYNTL  G  ++ + E+A +L+ +M   ++     ++
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542

Query: 371 RTFIDGLC 378
              I+G C
Sbjct: 543 SILINGFC 550



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  F++L+    + +        F+ L   G    +   + L+    K+G V L + ++ 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             ++S    NV T   ++  LC + ++       ++++  G   +++TYNTL+N  CR G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L   M  G G      KP   TY+ +I+GLCKEG  ++AK +  +M    L P
Sbjct: 274 LVSEAFGLVDCMA-GKG-----LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  T+  ++   C   D  EA+ +  EM+ +GV P+++S + I+    +NG++  A    
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M    + P+   Y  L++G+C    ++   ++   M   GC  D  +YN L+NG C+ 
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           K +++A  L+ E+  +G+ P   T  TL HG  +     +AL LF  M    +  D  TY
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 371 RTFIDGLC 378
            T +DG C
Sbjct: 508 NTLMDGFC 515



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 6/287 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N LL  L + K  D    LFK +   G+FPD YT + LI+ +CK G ++    +F 
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+VVT+ +L+ G C    + +A  L+  + +    P+ I+++ LING C  G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L+ EM     E G+  KP  VT + II G  + G + KA +    M  E + P
Sbjct: 554 LVSEAFRLWDEMK----EKGI--KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + +TY +LI+ F    +++ A  L+  M ++G+ PN+V+ N I+    ++G+M  A  +L
Sbjct: 608 DCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVL 667

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
             M+   + P+  TY +L++G+     +     +   M   G   DD
Sbjct: 668 HKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 90/192 (46%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV +  LI  +  A    E       +  +G   ++ + N ++  + K G +D A ++ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
             V+     N +T N +++  C  GK++ V      ME  G   D  +YN L+N YC+  
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V EA  L + +  KG+KP + TYN L +GL +    ERA ++  EM G  +  +  T+ 
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 372 TFIDGLCVRPQV 383
             +   C +  V
Sbjct: 334 PMLVESCRKEDV 345



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 54/108 (50%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N L+    K +++D    L   +   GL P+L TY+ ++  F + G++    +
Sbjct: 606 PPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEM 665

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           +  +++     P+  T+TSLI G  ++  + EA  +  ++   G  P+
Sbjct: 666 VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 196/405 (48%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN ++  L K       + +F ++    L PD +TY+ LI   C+  ++   F +
Sbjct: 195 PSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEV 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++    PN VT+++LI GLC E RI EA  +  ++   G EP V TY   I+ LC 
Sbjct: 255 FDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCD 314

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+NL + M    G+ G    P+  TY+ II GL + G ++ A  ++ +M  E L
Sbjct: 315 IGRVDDAINLVRSM----GKKGC--SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368

Query: 189 NPNVVTYTSLIHGFCHAN---------DWNEAKGLLI----------------------- 216
            PN VTY +LI+  C            DW E  G L                        
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV 428

Query: 217 ---EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              +M+  G  P VV+ N ++ E  K G ++NA+R L +M + +  P+  TY  L+ GFC
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK++     F  M   G   + ++Y  +I+GYCK  +++ ALSL+  +   G   ++ 
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN +  GL +  +   A K   +M    +  +T TY + I+GLC
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 193/400 (48%), Gaps = 41/400 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SFN LL  L K     +  +++ ++ S G+ P L T++ +IN  CK G+V    ++F +I
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +    P+  T+TSLI G C   ++ +A  +F ++   GC PN +TY+TLINGLC  G  
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+++ +EMT    E G+  +P   TY++ I  LC  G VD A  L   M  +  +P+V
Sbjct: 284 GEAMDMLEEMT----EKGI--EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT++I G   A     A G+  +M+ +G+ PN V+ N ++NELC  G+   A ++ D 
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 253 MVQCDVRPNAFTYNTLMDGF-----------------------------------CLTGK 277
           M       NA TYN ++ G                                       G 
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N        M+   C+ D+ +Y  LI+G+CK  +++ A S + E+   GI P   TY  
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  G  +  + + AL LF  M+ N  +A   TY   I GL
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 181/400 (45%), Gaps = 37/400 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     +   L +F  +   G   +  TY+ +I     M  +    V+
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVV 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+   +P VVT+ +LI        +  A      +K   CEP+  TY  LI+G C+
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A + F EM      +     PN  TY+ +IDG CKEG +D A  LF +M+    
Sbjct: 490 GGKLDSATSFFYEM------LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + ++ TY ++I G    N ++EA+    +M +QG+QPN ++   ++N LCKN   + A +
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603

Query: 249 LLDLMVQCDVRPNAFTY-------------------------------NTLMDGFCLTGK 277
           +   M + +  PNA TY                               +TL+ G C  G+
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGR 663

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            N   +L  +M+  G       Y  L+  +CK+ +V+ AL ++N +  KG +P +  Y  
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L   L  + +AE AL +F  +      +D   +   +DGL
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGL 763



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V ++N L+    K  + +        +      PD  TY  LI+ FCK G++   
Sbjct: 438 PSPT-VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              F  +L+   +PN  T+T++I G C E +I  A +LF +++  GC  ++ TYN +I+G
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L +      A     +MT    E G+  +PNT+TY+ +I+GLCK    + A ++F +M+ 
Sbjct: 557 LSKGNRFSEAEKFCAKMT----EQGL--QPNTITYTSLINGLCKNTATNLAFKIFHEMEK 610

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +N  PN  TYTSLI+G C     + A+ L     + G +P + + + +++ LC+ G+ + 
Sbjct: 611 KNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNE 666

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS+L++ M +  + P+   Y +L+   C + K++   E+F  M   G +   F Y +LI 
Sbjct: 667 ASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLIC 726

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             C     EEAL+++  L  K     ++ +  L  GL +   ++  +K    M+  +   
Sbjct: 727 ALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTP 786

Query: 366 DTCTY 370
              TY
Sbjct: 787 SLHTY 791



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 41  GLFP-DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           GLF   LY+++ L+    K   V+    ++ +I  S   P+++TF ++I  LC + ++ E
Sbjct: 156 GLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQE 215

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  +F K+  F   P+  TY +LI G CR      A  +F  M            PN+VT
Sbjct: 216 AVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGC------NPNSVT 269

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I+GLC EG + +A ++  +M  + + P V TYT  I   C     ++A  L+  M 
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+V +   I++ L + GKM+ A  +   M++  + PN  TYN L++  C  G+  
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              ++F  ME  G   +  +YN +I G     ++E+A+ ++N++   G  PTVVTYNTL 
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               +      A +    M+ ++   D  TY   I G C
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 166/341 (48%), Gaps = 12/341 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K    D+  S F  +   G+ P+ +TY+ +I+ +CK G++ +   +
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+  +  + ++ T+ ++I GL   +R  EA     K+   G +PN ITY +LINGLC+
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN- 187
              T +A  +F EM   N        PN  TY+ +I GLC+EG VD A+ L      EN 
Sbjct: 595 NTATNLAFKIFHEMEKKNC------LPNAHTYTSLIYGLCQEGKVDAAERL-----TENG 643

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P + TY++L+ G C     NEA  L+  M ++G+ P++     ++   CK+ K+D A 
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCAL 703

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            + +LM     +P+ F Y  L+   C   +      +F S+       D   + +L++G 
Sbjct: 704 EIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGL 763

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            +  + +  +     +  +   P++ TY  L   L ++ ++
Sbjct: 764 LQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 180/355 (50%), Gaps = 10/355 (2%)

Query: 30  VLSLFKRLNSIG-----LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            ++LF R  S       L P  YTY+IL++C  +  +  L    FG++LR+    + +  
Sbjct: 56  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 115

Query: 85  TSLIKGLCAESRIVEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + L+KG C   R  EA   L  +    GC P+V +YN L+  LC  G +  A NL + M 
Sbjct: 116 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMA 175

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
            G    G V  P+ V Y+ +IDG  KEG V+KA +LF +M    + P++VTY S++H  C
Sbjct: 176 EG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 231

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   ++A+  L +MV++ V PN  + N ++      G+   A R+   M +  + P+  
Sbjct: 232 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 291

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           T + LM   C  GKI   +++F +M   G   D FSYNI++NGY     + +   L++ +
Sbjct: 292 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 351

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              GI P   T+N            ++A+ +F EM+ + V  D  TYRT I  LC
Sbjct: 352 LGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 406



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 150/316 (47%), Gaps = 50/316 (15%)

Query: 4   MHPSP-----PPVSSFNILLGCL---AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC 55
           +H +P     P V S+NILL  L    K+   D +L +     ++   PD+  Y+ +I+ 
Sbjct: 136 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTV-CSPDVVAYNTVIDG 194

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K G V+    +F  +++    P++VT+ S++  LC    + +A A   ++      PN
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
             TYN LI G   TG    A+ +FKEM   +        P+ VT S+++  LCK G + +
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKIKE 308

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFC-------------------------------- 203
           A+++F  M  +  NP+V +Y  +++G+                                 
Sbjct: 309 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIK 368

Query: 204 -HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
            +AN     K ++I  EM D GV+P+VV+   ++  LC+ GKMD+A    + M+   V P
Sbjct: 369 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 428

Query: 261 NAFTYNTLMDGFCLTG 276
           + + YN L+ GFC  G
Sbjct: 429 DKYAYNCLIQGFCTHG 444



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 14/289 (4%)

Query: 100 AAALFTKLKAFGCEPNVI-----TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           A ALF +  +    P V+     TY  L++   R     +AL  F ++           +
Sbjct: 56  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG------LR 109

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKG 213
            + +  S ++ G C+    D+A ++ L    E    P+V +Y  L+   C+     +A  
Sbjct: 110 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADN 169

Query: 214 LLIEMVDQGV--QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           LL  M + G    P+VV+ N +++   K G ++ A  L   MVQ  + P+  TYN+++  
Sbjct: 170 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 229

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C    +++ +     M +     ++++YN LI GY    + +EA+ ++ E+    I P 
Sbjct: 230 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 289

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VVT + L   L +  + + A  +F  M       D  +Y   ++G   +
Sbjct: 290 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 6/173 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V + ++L+G L K         +F  +   G  PD+++Y+I++N +   G +  
Sbjct: 284 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 343

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +L    AP+  TF   IK       + +A  +F +++  G +P+V+TY T+I 
Sbjct: 344 MTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 403

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            LCR G    A+  F +M +     GV   P+   Y+ +I G C  G + K +
Sbjct: 404 ALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYNCLIQGFCTHGILLKTQ 450


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 203/373 (54%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   + +  ++  + +FK+++S G+ P +   +  I+   K G+ +    I
Sbjct: 293 PNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCI 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA--ESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  ++     P+++++++++ G     +S + +   +F  +   G  PN   +N LIN  
Sbjct: 353 FDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAY 412

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A+ +F++M N  G I     P+TVT++ +I  LC+ G +D A   F  M   
Sbjct: 413 ARCGMMDKAMLIFEDMQN-KGMI-----PDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDN 245
            + P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+N LCK G++  
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 526

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              ++D+MVQ   RPN  T+N+LM+G+CL G +     L  +M S+G + + + Y  L++
Sbjct: 527 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCKN  +++AL+++ ++  KG+KPT V Y+ + HGLF+ R+   A K+F EM  +    
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 646

Query: 366 DTCTYRTFIDGLC 378
              TY   + GLC
Sbjct: 647 SIHTYGVVLGGLC 659



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 20/385 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIGLF----PDLYTYSILINC 55
           +P P  + N +L  LA+              + LFKR++         P ++TY+ILI+C
Sbjct: 106 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 165

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           + ++ +  LG  I GR+L++   P+  ++ SLI G   +  + +A  LF ++   G  P 
Sbjct: 166 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 224

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           ++  N++I  LC+      A ++ ++M +          P+  TYS+IIDGLCK   +DK
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLIIDGLCKSKAMDK 278

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A+ +  QM      PN +TY SLIHG+  +  WNE+  +  +M   GV P V + N  ++
Sbjct: 279 AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIH 338

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK--INRVKELFVSMESMGC 293
            L K+G+ + A  + D MV    +P+  +Y+T++ G+       +  V  +F  M + G 
Sbjct: 339 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 398

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +   +NILIN Y +   +++A+ ++ ++  KG+ P  VT+ T+   L  I + + AL 
Sbjct: 399 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 458

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
            F  M    V      Y   I G C
Sbjct: 459 KFNHMVDIGVPPSEAVYGCLIQGCC 483



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 6/373 (1%)

Query: 6   PSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P P  +S   +L G   A +     V ++F  + + G+ P+ + ++ILIN + + G +  
Sbjct: 361 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 420

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +IF  +      P+ VTF ++I  LC   R+ +A   F  +   G  P+   Y  LI 
Sbjct: 421 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 480

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G  + A  L  EM N +     +  P    +S II+ LCKEG V + K++   M 
Sbjct: 481 GCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 535

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNVVT+ SL+ G+C   +  EA  LL  M   G++PN      +++  CKNG++D
Sbjct: 536 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 595

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M+   V+P +  Y+ ++ G     +    K++F  M   G      +Y +++
Sbjct: 596 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 655

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C+N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    + 
Sbjct: 656 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 715

Query: 365 ADTCTYRTFIDGL 377
            +  TY   I  L
Sbjct: 716 PNIQTYSMMITNL 728



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 164/343 (47%), Gaps = 42/343 (12%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-----------V 62
           FNIL+   A+    D  + +F+ + + G+ PD  T++ +I+  C++G+           V
Sbjct: 405 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 464

Query: 63  SLGF----VIFGRILRSCF---------------------APNVVTFTSLIKGLCAESRI 97
            +G      ++G +++ C                       P V  F+S+I  LC E R+
Sbjct: 465 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 524

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            E   +   +   G  PNV+T+N+L+ G C  G+   A  L   M +    IG+  +PN 
Sbjct: 525 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI--EPNC 578

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
             Y  ++DG CK G +D A  +F  M ++ + P  V Y+ ++HG   A     AK +  E
Sbjct: 579 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 638

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M++ G   ++ +  V++  LC+N   D A+ LL+ +   +V+ +  T+N ++      G+
Sbjct: 639 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 698

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
               KELF ++ + G   +  +Y+++I    K +  EEA +L+
Sbjct: 699 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 741



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +  +S +IN  CK G+V+ G  I   ++++   PNVVTF SL++G C    + EA AL
Sbjct: 506 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 565

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G EPN   Y TL++G C+ G    AL +F++M +         KP +V YSII
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG------VKPTSVLYSII 619

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GL +      AK++F +M       ++ TY  ++ G C  N  +EA  LL ++    V
Sbjct: 620 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 679

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + ++++ N++++ + K G+   A  L D +    + PN  TY+ ++              
Sbjct: 680 KFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADN 739

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           LF+S+E  G   D    N ++       EV +A
Sbjct: 740 LFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 10/272 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 541 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 598

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V ++ ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 599 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 658

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 659 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMFKVGRRQEAKELFDAISTY 712

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TY+ +I        + EA  L I +   G   +    N I+  L    ++  A
Sbjct: 713 GLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           S  L ++ + ++   A T + L   F   G I
Sbjct: 773 SNYLSIIGENNLTLEASTISLLASLFSREGMI 804



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 79/155 (50%), Gaps = 1/155 (0%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P + + N++++   +  + D    ++  +++  + P+ F+Y +L+ GF   G++++   L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F+ M   G        N +I   CK KE+++A S+  ++   GI P + TY+ +  GL +
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +  ++A ++  +M       ++ TY + I G  +
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 198/417 (47%), Gaps = 54/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN++L  L + + +   L+++ ++    L PD+ TY ILI+  CK  +     V+
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN + ++ ++ GLC   +I +A  LF+K++A GC  ++ITYN L+NG C+
Sbjct: 221 FDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCK 280

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   A  L + +T     +GV      + Y  +I+GL +    ++A   + +M  EN+
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGV------IGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+ YT +I G        EA  LL EM ++G++P+ +  N ++   C  G +D A  
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + + D  PN  TY+ L+ G C  G IN+ + +F  ME +GC     ++N LING C
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 309 KNKEVEEALSLYNELPF------------------------------------------- 325
           K   +EEA  L+ ++                                             
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 326 -----KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                 G+ P + TYN L +G  +      A KLF EMQ      D+ TY T IDGL
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 189/379 (49%), Gaps = 19/379 (5%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F++L+   ++    +  +  F  +      PDL+ ++++++   +     L   ++ ++
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+    P+VVT+  LI GLC   +  +A  LF ++   G  PN I Y+ +++GLC+    
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF +M             + +TY+++++G CK G++D A  L   +  +     V
Sbjct: 250 FDAQRLFSKMRASGC------NRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGV 303

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + Y  LI+G   A  + EA     +M+ + ++P+V+   +++  L + G++  A  LL  
Sbjct: 304 IGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  +RP+   YN L+ GFC  G ++  + L + +    C  ++ +Y+ILI G CKN  
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-------------Q 359
           + +A  ++ E+   G  P+VVT+N+L +GL +  + E A  LF +M             Q
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483

Query: 360 GNDVAADTCTYRTFIDGLC 378
           G D   D  + +  ++ LC
Sbjct: 484 GTDKVFDIASLQVMMERLC 502



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 59/415 (14%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+LL    K+ + D   +L + L   G    +  Y  LIN   +  +     + + ++
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           LR    P+V+ +T +I+GL  E R+ EA  L  ++   G  P+ I YN LI G C  G+ 
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L  E++  +        PN  TYSI+I G+CK G ++KA+ +F +M+     P+V
Sbjct: 390 DEAESLRLEISKHDC------FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSV 443

Query: 193 VTYTSLIHGFCHANDWNEAK---------------------------------------- 212
           VT+ SLI+G C AN   EA+                                        
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 213 --------GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                    LL+++VD GV P++ + N+++N  CK G ++ A +L   M      P++ T
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL- 323
           Y TL+DG    G+     E+F  M   GC  +  +Y  ++   C+   +  ALS++ +  
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623

Query: 324 -PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             F+G +   V    +    F+  + + A++  +EM       D   Y  F+ GL
Sbjct: 624 RDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGL 675



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 114/230 (49%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           K ++  +S++I+   + G  +KA E F  M+  +  P++  +  ++H       +  A  
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +  +M+   + P+VV+  ++++ LCK  K  +A  L D M    + PN   Y+ ++ G C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              KI   + LF  M + GC  D  +YN+L+NG+CK+  +++A +L   L   G    V+
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI 304

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            Y  L +GLF  R+ E A   + +M   ++  D   Y   I GL    +V
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 30/375 (8%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   +++IL+  + KN   +    +FK +  +G  P + T++ LIN  CK  ++  
Sbjct: 402 HDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEE 461

Query: 65  GFVIFGR--ILR--SCFAP---------NVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++F +  I+R  S F           ++ +   +++ LC    I++A  L  +L   G
Sbjct: 462 ARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG 521

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             P++ TYN LING C+ G+   A  LFKEM    G +     P++VTY  +IDGL + G
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEM-QLKGHM-----PDSVTYGTLIDGLYRAG 575

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD--QGVQPNVVS 229
             + A E+F QM  +   P   TY +++   C  N+ + A  + ++ +   +G +   V 
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVR 635

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT---YNTLMDGFCLTGKINRVKELFV 286
              ++ E   N ++  A R L   ++ D++   F    Y   + G     +      +F 
Sbjct: 636 ---VVAESFDNEELQTAIRRL---LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            ++         S  +LI   C  + ++ A+ ++     +G +      N L   L  + 
Sbjct: 690 VLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLD 749

Query: 347 QAERALKLFVEMQGN 361
           + + AL L   M+ +
Sbjct: 750 RKDDALFLANRMEAS 764



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 99/216 (45%)

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           +II  L KE   +   ++  ++K   +  +   ++ LI  +  A    +A      M D 
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDF 157

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
             +P++ + N+I++ L +      A  + + M++C++ P+  TY  L+ G C T K    
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             LF  M   G   +   Y+I+++G C+ K++ +A  L++++   G    ++TYN L +G
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNG 277

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +    + A  L   +  +        Y   I+GL
Sbjct: 278 FCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGL 313



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 74/149 (49%)

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            ++I+ +L K    +   ++L  +    ++ ++  ++ L++ +   G   +  E F  M 
Sbjct: 96  QDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMR 155

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              CK D F++N++++   + +    AL++YN++    + P VVTY  L HGL +  + +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            AL LF EM    +  +   Y   + GLC
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLC 244


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 159/284 (55%), Gaps = 8/284 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMT------NGNGEIGVVFKPNTVTYSIII 164
           GC PNV+T+NTL+N LCR G  + AL L   M       N  G+  +  K + V  + I+
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHI--KADVVISTAIV 62

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           D LCK+G    A+ LF +M  + + PNV+TY  +I  FCH+  W++A  LL  M+++ + 
Sbjct: 63  DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 122

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P++V+ + ++N   K  K+  A  +   M++  + P   TYN+++DGFC   +++  K +
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             SM S GC  D  +++ LINGYCK K V+  + ++ E+  +GI    VTY TL HG  +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           +   + A  L  EM    VA D  T+   + GLC + ++R  +A
Sbjct: 243 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 286



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 162/295 (54%), Gaps = 16/295 (5%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN----------VITYNTLINGLCR 128
           PNVVTF +L+  LC E R++EA AL  ++   G +PN          V+    +++ LC+
Sbjct: 8   PNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCK 67

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ I A NLF EM     E G+   PN +TY+ +ID  C  G    A +L   M  + +
Sbjct: 68  DGNHINAQNLFTEM----HEKGIF--PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 121

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP++VT+++LI+ F      +EA+ +  EM+   + P  ++ N +++  CK  ++D+A R
Sbjct: 122 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 181

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD M      P+  T++TL++G+C   +++   E+F  M   G   +  +Y  LI+G+C
Sbjct: 182 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 241

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           +  +++ A  L NE+   G+ P  +T++ +  GL   ++  +A  +  ++Q ++V
Sbjct: 242 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEV 296



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN----------VVTFTSLIKG 90
           G  P++ T++ L+N  C+ G+V     +  R++     PN          VV  T+++  
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC +   + A  LFT++   G  PNV+TYN +I+  C +G    A  L + M        
Sbjct: 65  LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ---- 120

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ VT+S +I+   KE  V +A+E++ +M   ++ P  +TY S+I GFC  +  ++
Sbjct: 121 --INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 178

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           AK +L  M  +G  P+VV+ + ++N  CK  ++DN   +   M +  +  N  TY TL+ 
Sbjct: 179 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 238

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC  G ++  ++L   M S G   D  +++ ++ G C  KE+ +A ++  +L    + P
Sbjct: 239 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298

Query: 331 TVVTY 335
            ++ +
Sbjct: 299 RLIFF 303



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 6/240 (2%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K+ ++    +LF  ++  G+FP++ TY+ +I+ FC  G+ S    +   ++     P+
Sbjct: 65  LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           +VTF++LI     E ++ EA  ++ ++  +   P  ITYN++I+G C+      A  +  
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            M +          P+ VT+S +I+G CK   VD   E+F +M    +  N VTYT+LIH
Sbjct: 185 SMASKGC------SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 238

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           GFC   D + A+ LL EM+  GV P+ ++ + ++  LC   ++  A  +L+ + + +V P
Sbjct: 239 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 6/220 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++     +  +     L + +    + PD+ T+S LIN F K  +VS    I
Sbjct: 88  PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 147

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +LR    P  +T+ S+I G C + R+ +A  +   + + GC P+V+T++TLING C+
Sbjct: 148 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 207

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  + +F EM       G+V   NTVTY+ +I G C+ G +D A++L  +M    +
Sbjct: 208 AKRVDNGMEIFCEMHRR----GIV--ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 261

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            P+ +T+  ++ G C   +  +A  +L ++    V P ++
Sbjct: 262 APDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLI 301



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 50/230 (21%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA--------------- 262
           MV+ G +PNVV+ N +MN LC+ G++  A  L+D MV+   +PNA               
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 263 ------------------------------FTYNTLMDGFCLTGKINRVKELFVSMESMG 292
                                          TYN ++D FC +G+ +   +L   M    
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              D  +++ LIN + K ++V EA  +Y E+    I PT +TYN++  G  +  + + A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
           ++   M     + D  T+ T I+G C   +V      F    R+G   NT
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 230



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 57/111 (51%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+    K K  D  + +F  ++  G+  +  TY+ LI+ FC++G +     +
Sbjct: 193 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
              ++    AP+ +TF  ++ GLC++  + +A A+   L+     P +I +
Sbjct: 253 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFF 303


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +    +    L   L   G  P++  Y+ LI+  CK G++     +F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +     N  T+T LI GL       +   ++ K++  G  PN+ TYN ++N LC+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDG 282

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A  +F EM     E GV    N VTY+ +I GLC+E   ++A E+  QMK + +NP
Sbjct: 283 RTKDAFKVFDEMR----ERGV--SCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY +LI GFC      +A  L  ++  +G+ P++V+ N++++  CK G    A +++
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++P+  TY  L+D F  +  + +  +L  SME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIK 456

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  L+  +  K  +P  V YNT+  G  +   + RAL+LF EM+  ++  +  +Y
Sbjct: 457 GRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 371 RTFIDGLC 378
           R  I+ LC
Sbjct: 517 RYMIEVLC 524



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 173/319 (54%), Gaps = 6/319 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ +L+  L KN        +++++   G+FP+L+TY+ ++N  CK G+    F +F  +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                + N+VT+ +LI GLC E +  EA  +  ++K+ G  PN+ITYNTLI+G C     
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKL 354

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L +++ +          P+ VTY+I++ G CK+G    A ++  +M+   + P+ 
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT LI  F  +++  +A  L   M + G+ P+V + +V+++  C  G+M+ ASRL   
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV+    PN   YNT++ G+C  G   R   LF  ME      +  SY  +I   CK ++
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 313 VEEALSLYNELPFKGIKPT 331
            +EA  L  ++   GI P+
Sbjct: 529 SKEAEGLVEKMIDSGIGPS 547



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 184/358 (51%), Gaps = 7/358 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R    SP  V    ++ GC  K +  +    LF  +   GL  + +TY++LI+   K G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               GF ++ ++      PN+ T+  ++  LC + R  +A  +F +++  G   N++TYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLCR      A  +  +M +          PN +TY+ +IDG C    + KA  L 
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDG------INPNLITYNTLIDGFCGVRKLGKALSLC 361

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +K   L+P++VTY  L+ GFC   D + A  ++ EM ++G++P+ V+  ++++   ++
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS 421

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             M+ A +L   M +  + P+  TY+ L+ GFC+ G++N    LF SM     + ++  Y
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIY 481

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           N ++ GYCK      AL L+ E+  K + P V +Y  +   L + R+++ A  L  +M
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 187/378 (49%), Gaps = 23/378 (6%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + +++    +++  D+ +  F  +   G  P         NCF  +    +G   F +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-------SNCFNNLLTFVVGSSSFNQWW 149

Query: 74  RSCF--------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             CF          +V +F  +IKG C    I ++  L  +L+ FG  PNV+ Y TLI+G
Sbjct: 150 --CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A +LF EM    G+ G+V   N  TY+++I GL K G   +  E++ +M+ 
Sbjct: 208 CCKKGEIEKAKDLFFEM----GKFGLV--ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE 261

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + PN+ TY  +++  C      +A  +  EM ++GV  N+V+ N ++  LC+  K + 
Sbjct: 262 HGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANE 321

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ ++D M    + PN  TYNTL+DGFC   K+ +   L   ++S G      +YNIL++
Sbjct: 322 ANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVS 381

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+CK  +   A  +  E+  +GIKP+ VTY  L          E+A++L   M+   +  
Sbjct: 382 GFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTP 441

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY   I G C++ ++
Sbjct: 442 DVHTYSVLIHGFCIKGRM 459



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 34/250 (13%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G  +  F   +  L    + E        Y  +I+ +  +   + +     EMVD+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 223 VQP----------------------------------NVVSSNVIMNELCKNGKMDNASR 248
             P                                  +V S  +++   C+ G+++ +  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +    PN   Y TL+DG C  G+I + K+LF  M   G   ++++Y +LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++   +Y ++   G+ P + TYN + + L +  + + A K+F EM+   V+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 369 TYRTFIDGLC 378
           TY T I GLC
Sbjct: 305 TYNTLIGGLC 314



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 39/156 (25%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+   A++ + +  + L   +  +GL PD++TYS+LI+ FC  G+++    +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465

Query: 69  FGRILRSCFAPN-----------------------------------VVTFTSLIKGLCA 93
           F  ++   F PN                                   V ++  +I+ LC 
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
           E +  EA  L  K+   G  P+    ++++N + R 
Sbjct: 526 ERKSKEAEGLVEKMIDSGIGPS----DSILNLISRA 557



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 30/199 (15%)

Query: 200 HGFCHAND--------------WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           HGF H ++              ++ A+ LL++++   +Q    +S+ +++ L ++     
Sbjct: 33  HGFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKT 92

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            SRL ++++      NA+  +  +D              F  M   G       +N L+ 
Sbjct: 93  KSRLYEVII------NAYVQSQSLDSSIY---------YFNEMVDKGFVPGSNCFNNLLT 137

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
               +    +    +NE   K +   V ++  +  G  E  + E++  L VE++    + 
Sbjct: 138 FVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSP 196

Query: 366 DTCTYRTFIDGLCVRPQVR 384
           +   Y T IDG C + ++ 
Sbjct: 197 NVVIYTTLIDGCCKKGEIE 215


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 198/417 (47%), Gaps = 54/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN++L  L + + +   L+++ ++    L PD+ TY ILI+  CK  +     V+
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN + ++ ++ GLC   +I +A  LF+K++A GC  ++ITYN L+NG C+
Sbjct: 221 FDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCK 280

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   A  L + +T     +GV      + Y  +I+GL +    ++A   + +M  EN+
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGV------IGYGCLINGLFRARRYEEAHMWYQKMLRENI 334

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+ YT +I G        EA  LL EM ++G++P+ +  N ++   C  G +D A  
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + + D  PN  TY+ L+ G C  G IN+ + +F  ME +GC     ++N LING C
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454

Query: 309 KNKEVEEALSLYNELPF------------------------------------------- 325
           K   +EEA  L+ ++                                             
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514

Query: 326 -----KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                 G+ P + TYN L +G  +      A KLF EMQ      D+ TY T IDGL
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 195/393 (49%), Gaps = 21/393 (5%)

Query: 1   MRHMHPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           ++ +  S   +SS  F++L+   ++    +  +  F  +      PDL+ ++++++   +
Sbjct: 116 LQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVR 175

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
                L   ++ ++L+    P+VVT+  LI GLC   +  +A  LF ++   G  PN I 
Sbjct: 176 KEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQII 235

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y+ +++GLC+      A  LF +M             + +TY+++++G CK G++D A  
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGC------NRDLITYNVLLNGFCKSGYLDDAFT 289

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   +  +     V+ Y  LI+G   A  + EA     +M+ + ++P+V+   +++  L 
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           + G++  A  LL  M +  +RP+   YN L+ GFC  G ++  + L + +    C  ++ 
Sbjct: 350 QEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNH 409

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y+ILI G CKN  + +A  ++ E+   G  P+VVT+N+L +GL +  + E A  LF +M
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 359 -------------QGNDVAADTCTYRTFIDGLC 378
                        QG D   D  + +  ++ LC
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLC 502



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 59/415 (14%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+LL    K+ + D   +L + L   G    +  Y  LIN   +  +     + + ++
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           LR    P+V+ +T +I+GL  E R+ EA  L  ++   G  P+ I YN LI G C  G+ 
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L  E++  +        PN  TYSI+I G+CK G ++KA+ +F +M+     P+V
Sbjct: 390 DEAESLRLEISKHDC------FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSV 443

Query: 193 VTYTSLIHGFCHANDWNEAK---------------------------------------- 212
           VT+ SLI+G C AN   EA+                                        
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 213 --------GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                    LL+++VD GV P++ + N+++N  CK G ++ A +L   M      P++ T
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL- 323
           Y TL+DG    G+     E+F  M   GC  +  +Y  ++   C+   +  ALS++ +  
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623

Query: 324 -PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             F+G +   V    +    F+  + + A++  +EM       D   Y  F+ GL
Sbjct: 624 RDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGL 675



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 173/388 (44%), Gaps = 33/388 (8%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   +++IL+  + KN   +    +FK +  +G  P + T++ LIN  CK  ++  
Sbjct: 402 HDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEE 461

Query: 65  GFVIFGR--ILR--SCFAP---------NVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
             ++F +  I+R  S F           ++ +   +++ LC    I++A  L  +L   G
Sbjct: 462 ARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG 521

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             P++ TYN LING C+ G+   A  LFKEM    G +     P++VTY  +IDGL + G
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEM-QLKGHM-----PDSVTYGTLIDGLYRAG 575

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD--QGVQPNVVS 229
             + A E+F QM  +   P   TY +++   C  N+ + A  + ++ +   +G +   V 
Sbjct: 576 RNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVR 635

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT---YNTLMDGFCLTGKINRVKELFV 286
              ++ E   N ++  A R L   ++ D++   F    Y   + G     +      +F 
Sbjct: 636 ---VVAESFDNEELQTAIRRL---LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            ++         S  +LI   C  + ++ A+ ++     +G +      N L   L  + 
Sbjct: 690 VLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLD 749

Query: 347 QAERALKLF--VEMQGNDVAADTCTYRT 372
           + + AL L   +E  G D+ A    YRT
Sbjct: 750 RKDDALFLANRMEASGYDLGAHL-HYRT 776



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 76/154 (49%)

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            ++I+ +L K    +   ++L  +    ++ ++  ++ L++ +   G   +  E F  M 
Sbjct: 96  QDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMR 155

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              CK D F++N++++   + +    AL++YN++    + P VVTY  L HGL +  + +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            AL LF EM    +  +   Y   + GLC   ++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 12/377 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P + +++ LL    K    +    L K + S GL PD   Y+ ++   CK  ++    
Sbjct: 78  STPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEAL 137

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++R+   P ++TF +LI G C E  +  A +L  K+ A G + +V+TYNTL++GL
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGL 197

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  L + M            P+ V YS  + GLCK G V  A ++  QM+  
Sbjct: 198 CKAGRLQEAEQLLERMKASG------CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDN 245
           + +PNVVTY +++ G C +   + A  ++ +M    G   NVV  + +++ LCK G+   
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  +++ M +   RP+  TY++L++G C  GKI    E    M   GCK +  +Y  L++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 306 GYCKNKEVEEALSLYNELPFKGIK-----PTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           G C    + EA  +  E+   G       P+V TYN L  GL +  + + ALK F  M+ 
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 361 NDVAADTCTYRTFIDGL 377
                D  +Y T ++GL
Sbjct: 432 QGCDPDGVSYSTIVEGL 448



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 185/357 (51%), Gaps = 12/357 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  ++  L K+      L L + +   G  P L T++ LI+  C+   + +   +
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  S    +VVT+ +L+ GLC   R+ EA  L  ++KA GC P+V+ Y++ + GLC+
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYEN 187
           +G  + A  + ++M + +        PN VTY+ I+DGLCK G +D A E+  QM   + 
Sbjct: 235 SGKVLDAHQVLEQMRDSH------HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              NVV Y++++ G C      EA+ ++  M   G +P+VV+ + ++N LCK GK++ A 
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-----CKHDDFSYNI 302
             +  M     +PNA TY +L+ G C  G++   + +   M S G     C     +YN 
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           LI G CK   +++AL  +  +  +G  P  V+Y+T+  GL    +A +A  +  E++
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 191/376 (50%), Gaps = 13/376 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV----S 63
           PP   +FN L+   +K         L + + +  + P++ +Y+ L+   CK+ +      
Sbjct: 7   PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L   +  R  RS   P++VT+++L+ G C   ++ E+  L  ++ + G  P+ + Y  ++
Sbjct: 67  LVRDMISRGGRS--TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
             LC++     AL L +EM            P  +T++ +I G C+E  ++ A  L  +M
Sbjct: 125 ASLCKSARLGEALELLEEMIRAG------CCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               +  +VVTY +L+ G C A    EA+ LL  M   G  P+VV+ +  +  LCK+GK+
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM-GCKHDDFSYNI 302
            +A ++L+ M      PN  TYNT++DG C +GKI+   E+   M S  GC  +   Y+ 
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +++G CK    +EA S+   +   G +P VVTY++L +GL +  + E A++   EM    
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 363 VAADTCTYRTFIDGLC 378
              +  TY + + GLC
Sbjct: 359 CKPNAVTYCSLVHGLC 374



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 161/306 (52%), Gaps = 5/306 (1%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   PN VTF +L+ G   + R  +   L   + A   +PNV++YN L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L ++M +  G       P+ VTYS ++ G CK G V++++EL  ++    L P+ +
Sbjct: 63  EAEELVRDMISRGGR----STPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT ++   C +    EA  LL EM+  G  P +++ N +++  C+   ++ A  LL  M
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               V+ +  TYNTLMDG C  G++   ++L   M++ GC  D  +Y+  + G CK+ +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAADTCTYRT 372
            +A  +  ++      P VVTYNT+  GL +  + + AL++  +M  +D    +   Y T
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 373 FIDGLC 378
            +DGLC
Sbjct: 299 VVDGLC 304



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 123/219 (56%), Gaps = 3/219 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKM 59
           MR  H   P V ++N +L  L K+   DT L + +++ +S G   ++  YS +++  CK+
Sbjct: 248 MRDSH-HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G+      +   + R+   P+VVT++SL+ GLC   +I EA     ++   GC+PN +TY
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            +L++GLC  G    A  + +EM++  G  G    P+  TY+ +I GLCK G +D A + 
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSS-GGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKF 425

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           F +M+ +  +P+ V+Y++++ G   +    +A+ +L E+
Sbjct: 426 FQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+  GC  +  ++N L+NG+ K     +   L   +  + I+P VV+YN L  GL ++ +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 348 AERALKLFVEM--QGNDVAADTCTYRTFIDGLC 378
              A +L  +M  +G     D  TY T + G C
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYC 93


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 30/374 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  + ++ + +     F  + ++GL PDL TY+ LIN +CK G +     +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG + R+  AP+V+T+  L+ G C    + EA     ++   GC+P+V TY  L+NG  +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
             +  +    F EM +                    G     F+            +TVT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I +DGLCK G +  A  L+++M  + L P+ +TYT LIH  C      EA+ +   M+
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ P+ V+  V ++  C+ G + +A      M++  VRPN  TYN L+   C  G+ N
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              + F  M   G   + ++Y +LI+G CK    EEA+ LY+E+   GI P   T+N LF
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694

Query: 340 HGLFEIRQAERALK 353
            G F+  Q++ A++
Sbjct: 695 KG-FDEGQSKHAIQ 707



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 187/381 (49%), Gaps = 9/381 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI--GLFPDLYTYSILINCFCKMGQVSLGF 66
           P + ++N LL    +    D    L + + +   G  P   TY+++IN   + G++    
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +  R +R     +  TF  LI G  A   + +A AL  +++  G  P V+TYNT+I+G+
Sbjct: 289 QLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R+G+   A   F EM      +G++  P+ +TY+ +I+G CK G + +A  LF  +K  
Sbjct: 348 FRSGNVEAARMKFVEMR----AMGLL--PDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+V+TY  L+ G+C   D  EA+    EMV+QG QP+V +  ++MN   K   +   
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
               D M+   ++P+ F YNT +    + G  +   +L   M S G   D  +YNI ++G
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK+  +++A  L+ ++   G++P  +TY  L H   E  +   A  +F  M  + +   
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 367 TCTYRTFIDGLCVRPQVRFTY 387
             TY  FI   C R  +   Y
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAY 602



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 176/359 (49%), Gaps = 9/359 (2%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L+ F+ +   G+ P +   ++++       +      ++  +L+    P++VT+ +L+  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 91  LCAESRIVEAAALFTKLKAF--GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
              E R+ +AA L  +++A   GC P+ +TYN +INGL R G    A  L   M      
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-- 298

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
                K +  T++ +I G    G V+KA  L L+M+ E + P VVTY ++IHG   + + 
Sbjct: 299 -----KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A+   +EM   G+ P++++ N ++N  CK G +  A  L   + +  + P+  TYN L
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  G +   +     M   GC+ D  +Y IL+NG  K + +      ++E+  KG+
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +P    YNT       +     A +L   M    +++DT TY  F+DGLC    ++  Y
Sbjct: 474 QPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAY 532



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 189/417 (45%), Gaps = 46/417 (11%)

Query: 1   MRHMHPSP----PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCF 56
           +R M   P    P   ++N+++  LA+    +    L  R+  +      +T++ LI  +
Sbjct: 254 LREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGY 312

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
              G V     +   +      P VVT+ ++I G+     +  A   F +++A G  P++
Sbjct: 313 FARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDL 372

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           ITYN+LING C+ G+   AL LF ++            P+ +TY+I++DG C+ G +++A
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAG------LAPSVLTYNILLDGYCRLGDLEEA 426

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN---------- 226
           +    +M  +   P+V TYT L++G     +    +    EM+ +G+QP+          
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486

Query: 227 -------------------------VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
                                     V+ N+ ++ LCK+G + +A  L   MV   ++P+
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             TY  L+   C  G++   +++F  M   G      +Y + I+ YC+   +  A   + 
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQ 606

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++  +G++P  VTYN L H L  + +   A + F EM    ++ +  TY   IDG C
Sbjct: 607 KMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 61/119 (51%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++ + +    +  +  +    F+++   G+ P+  TY++LI+  C+MG+ +L + 
Sbjct: 579 PPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQ 638

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            F  +L    +PN  T+T LI G C E    EA  L++++   G  P+  T+N L  G 
Sbjct: 639 HFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 199/409 (48%), Gaps = 49/409 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N +L  L K         L   + S GL P+  TY+IL+  +CKMG +     +
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   P+V T+  LI GLC E RI EA  L  +++     P+V++YNTLING   
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L +EM+    E GV  KPN VT++I++   CKEG +D A     +M+    
Sbjct: 361 WSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC---------- 238
           +P+ VTY +LI+G+C A +  EA   + EM  + ++ + V+ N I+  LC          
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 239 -------------------------KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                    K+G +D A +L D M + ++ P+  TYN ++ G C
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 274 LTGK----INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
             GK    I+++ EL  S    G   D+ +YN +++GYC+  +VE+A   +N++     K
Sbjct: 535 QCGKTEQAISKLNELLES----GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V T N L  GL      E+ALKLF        A DT TY T I  LC
Sbjct: 591 PDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 191/342 (55%), Gaps = 12/342 (3%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +G+ P++ T++I+I  +C   +          + +   +P+ VT+ +++  LC + R+ +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  L   +K+ G  PN  TYN L+ G C+ G    A N+ + MT  N        P+  T
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVWT 315

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I+GLC EG +++A +L  +M+   L P+VV+Y +LI+G    +  +EA  LL EM 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++GV+PN V+ N+++   CK GKMD+AS  +  M +    P+  TYNTL++G+C  G + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 280 RVKELFVSMESMGCKH---DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
              E F +M+ MG K+   D  + N ++   C+ K++EEA  L +    +G     V+Y 
Sbjct: 436 ---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TL  G F+    +RALKL+ EM+  ++   T TY   I GLC
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  L      +    L   + ++ L PD+ +Y+ LIN   +  ++S  F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT   ++K  C E ++ +A+   TK++  G  P+ +TYNTLING C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A     EM   N       K ++VT + I+  LC+E  +++A +L    +    
Sbjct: 431 AGNMGEAFRTMDEMGRKN------MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V+Y +LI G+    + + A  L  EM ++ + P+ V+ N I+  LC+ GK + A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ +++  + P+  TYNT++ G+C  G + +  +    M     K D F+ NIL+ G C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +E+AL L+N    KG     VTYNTL   L +  + + A  L  EM+  ++  D  
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 369 TYRTFIDGLCVRPQVR 384
           TY   I  L    ++R
Sbjct: 665 TYNAIITALTDSGRIR 680



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 185/386 (47%), Gaps = 19/386 (4%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++LLG +A ++ +D  LS+  RL S    P        I  + + GQ    F IF ++ R
Sbjct: 109 SLLLGFIATDRRHDLHLSIL-RLTS----PSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 75  SCFAPNVVTFTSLIKGLC---AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
               PN++T  +L+  L    +   +  +   F      G  PNV T+N +I G C    
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+     M   N        P+ VTY+ I+D LCK+G +  A++L + MK   L PN
Sbjct: 224 FKDAVEFLNVMGKYN------CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPN 277

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY  L++G+C      EA  ++  M    + P+V + N+++N LC  G+++ A +L D
Sbjct: 278 RNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRD 337

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    + P+  +YNTL++G     KI+   +L   M   G K +  ++NI++  YCK  
Sbjct: 338 EMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEG 397

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++++A +   ++   G  P  VTYNTL +G  +      A +   EM   ++  D+ T  
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457

Query: 372 TFIDGLCVRPQVRFTY-----ARRKG 392
           T +  LC   ++   Y     AR++G
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRG 483



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 29/404 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + NI++    K    D   +   ++   G  PD  TY+ LIN +CK G +   F  
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R     + VT  ++++ LC E ++ EA  L +  +  G   + ++Y TLI G  +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL L+ EM     E  ++  P+TVTY+ II GLC+ G  ++A     ++    L
Sbjct: 501 DGNVDRALKLWDEMK----EKEII--PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY +++HG+C   D  +A     +MV+   +P+V + N+++  LC  G ++ A +
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  V      +  TYNTL+   C  G+++    L   ME      D ++YN +I    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 309 KNKEVEEALSLYNELPFKGIKP-----------------------TVVTYNTLFHGLFEI 345
            +  + EA    +++  KG  P                       + V Y+     L   
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYAR 389
            + + A+++F E +   +  D  TY   +DGL  R +     AR
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 204/373 (54%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   + +  ++  + +FK+++S G+ P +   +  I+   K G+ +    I
Sbjct: 237 PNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCI 296

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA--ESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  ++     P+++++++++ G     +S + +   +F  +   G  PN   +N LIN  
Sbjct: 297 FDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAY 356

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A+ +F++M N     G++  P+TVT++ +I  LC+ G +D A   F  M   
Sbjct: 357 ARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDN 245
            + P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+N LCK G++  
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 470

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              ++D+MVQ   RPN  T+N+LM+G+CL G +     L  +M S+G + + + Y  L++
Sbjct: 471 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCKN  +++AL+++ ++  KG+KPT V Y+ + HGLF+ R+   A K+F EM  +    
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 590

Query: 366 DTCTYRTFIDGLC 378
              TY   + GLC
Sbjct: 591 SIHTYGVVLGGLC 603



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 175/337 (51%), Gaps = 9/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P ++TY+ILI+C+ ++ +  LG  I GR+L++   P+  ++ SLI G   +  + +A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F ++   G  P ++  N++I  LC+      A ++ ++M +          P+  TYS+I
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLI 210

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK   +DKA+ +  QM      PN +TY SLIHG+  +  WNE+  +  +M   GV
Sbjct: 211 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 270

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK--INRV 281
            P V + N  ++ L K+G+ + A  + D MV    +P+  +Y+T++ G+       +  V
Sbjct: 271 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 330

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  M + G   +   +NILIN Y +   +++A+ ++ ++  KG+ P  VT+ T+   
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 390

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  I + + AL  F  M    V      Y   I G C
Sbjct: 391 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 427



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 6/373 (1%)

Query: 6   PSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P P  +S   +L G   A +     V ++F  + + G+ P+ + ++ILIN + + G +  
Sbjct: 305 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 364

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +IF  +      P+ VTF ++I  LC   R+ +A   F  +   G  P+   Y  LI 
Sbjct: 365 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 424

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G  + A  L  EM N +     +  P    +S II+ LCKEG V + K++   M 
Sbjct: 425 GCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 479

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNVVT+ SL+ G+C   +  EA  LL  M   G++PN      +++  CKNG++D
Sbjct: 480 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 539

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M+   V+P +  Y+ ++ G     +    K++F  M   G      +Y +++
Sbjct: 540 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 599

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C+N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    + 
Sbjct: 600 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 659

Query: 365 ADTCTYRTFIDGL 377
            +  TY   I  L
Sbjct: 660 PNIQTYSMMITNL 672



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 13/385 (3%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           RH   SPP + ++NIL+ C  +    D  L++  RL   GL PD ++YS LI  F K G+
Sbjct: 94  RH---SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 149

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +F  ++     P ++   S+IK LC    + +A ++  K+   G  P++ TY+ 
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+GLC++     A  + ++M     E G   +PN++TY+ +I G    G  +++  +F 
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRVFK 263

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--ELCK 239
           QM    + P V    S IH        NEAK +   MV +G +P+++S + +++      
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 323

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +  + +   + +LM+   + PN   +N L++ +   G +++   +F  M++ G   D  +
Sbjct: 324 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 383

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +  +I+  C+   +++AL  +N +   G+ P+   Y  L  G     +  +A +L  EM 
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 443

Query: 360 GNDVAADTCTY-RTFIDGLCVRPQV 383
             D+      Y  + I+ LC   +V
Sbjct: 444 NKDIPPPGVKYFSSIINNLCKEGRV 468



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 42/348 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P    FNIL+   A+    D  + +F+ + + G+ PD  T++ +I+  C++G+       
Sbjct: 344 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 403

Query: 62  ----VSLGF----VIFGRILRSCF---------------------APNVVTFTSLIKGLC 92
               V +G      ++G +++ C                       P V  F+S+I  LC
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E R+ E   +   +   G  PNV+T+N+L+ G C  G+   A  L   M +    IG+ 
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI- 518

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN   Y  ++DG CK G +D A  +F  M ++ + P  V Y+ ++HG   A     AK
Sbjct: 519 -EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  EM++ G   ++ +  V++  LC+N   D A+ LL+ +   +V+ +  T+N ++   
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              G+    KELF ++ + G   +  +Y+++I    K +  EEA +L+
Sbjct: 638 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 685



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +  +S +IN  CK G+V+ G  I   ++++   PNVVTF SL++G C    + EA AL
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G EPN   Y TL++G C+ G    AL +F++M +         KP +V YSII
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG------VKPTSVLYSII 563

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GL +      AK++F +M       ++ TY  ++ G C  N  +EA  LL ++    V
Sbjct: 564 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 623

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + ++++ N++++ + K G+   A  L D +    + PN  TY+ ++              
Sbjct: 624 KFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADN 683

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           LF+S+E  G   D    N ++       EV +A
Sbjct: 684 LFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 716



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 10/272 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 485 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 542

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V ++ ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 543 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 602

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 603 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMFKVGRRQEAKELFDAISTY 656

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TY+ +I        + EA  L I +   G   +    N I+  L    ++  A
Sbjct: 657 GLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 716

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           S  L ++ + ++   A T + L   F   G I
Sbjct: 717 SNYLSIIGENNLTLEASTISLLASLFSREGMI 748


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 204/373 (54%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   + +  ++  + +FK+++S G+ P +   +  I+   K G+ +    I
Sbjct: 313 PNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCI 372

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA--ESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  ++     P+++++++++ G     +S + +   +F  +   G  PN   +N LIN  
Sbjct: 373 FDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAY 432

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A+ +F++M N     G++  P+TVT++ +I  LC+ G +D A   F  M   
Sbjct: 433 ARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDN 245
            + P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+N LCK G++  
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 546

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              ++D+MVQ   RPN  T+N+LM+G+CL G +     L  +M S+G + + + Y  L++
Sbjct: 547 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 606

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCKN  +++AL+++ ++  KG+KPT V Y+ + HGLF+ R+   A K+F EM  +    
Sbjct: 607 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 666

Query: 366 DTCTYRTFIDGLC 378
              TY   + GLC
Sbjct: 667 SIHTYGVVLGGLC 679



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 20/385 (5%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDT-------VLSLFKRLNSIGLF----PDLYTYSILINC 55
           +P P  + N +L  LA+              + LFKR++         P ++TY+ILI+C
Sbjct: 126 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 185

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           + ++ +  LG  I GR+L++   P+  ++ SLI G   +  + +A  LF ++   G  P 
Sbjct: 186 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           ++  N++I  LC+      A ++ ++M +          P+  TYS+IIDGLCK   +DK
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLIIDGLCKSKAMDK 298

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A+ +  QM      PN +TY SLIHG+  +  WNE+  +  +M   GV P V + N  ++
Sbjct: 299 AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIH 358

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK--INRVKELFVSMESMGC 293
            L K+G+ + A  + D MV    +P+  +Y+T++ G+       +  V  +F  M + G 
Sbjct: 359 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 418

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +   +NILIN Y +   +++A+ ++ ++  KG+ P  VT+ T+   L  I + + AL 
Sbjct: 419 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 478

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
            F  M    V      Y   I G C
Sbjct: 479 KFNHMVDIGVPPSEAVYGCLIQGCC 503



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 6/373 (1%)

Query: 6   PSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P P  +S   +L G   A +     V ++F  + + G+ P+ + ++ILIN + + G +  
Sbjct: 381 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 440

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +IF  +      P+ VTF ++I  LC   R+ +A   F  +   G  P+   Y  LI 
Sbjct: 441 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 500

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G  + A  L  EM N +     +  P    +S II+ LCKEG V + K++   M 
Sbjct: 501 GCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 555

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNVVT+ SL+ G+C   +  EA  LL  M   G++PN      +++  CKNG++D
Sbjct: 556 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 615

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M+   V+P +  Y+ ++ G     +    K++F  M   G      +Y +++
Sbjct: 616 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 675

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C+N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    + 
Sbjct: 676 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 735

Query: 365 ADTCTYRTFIDGL 377
            +  TY   I  L
Sbjct: 736 PNIQTYSMMITNL 748



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 42/348 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P    FNIL+   A+    D  + +F+ + + G+ PD  T++ +I+  C++G+       
Sbjct: 420 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479

Query: 62  ----VSLGF----VIFGRILRSCF---------------------APNVVTFTSLIKGLC 92
               V +G      ++G +++ C                       P V  F+S+I  LC
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E R+ E   +   +   G  PNV+T+N+L+ G C  G+   A  L   M +    IG+ 
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI- 594

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN   Y  ++DG CK G +D A  +F  M ++ + P  V Y+ ++HG   A     AK
Sbjct: 595 -EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  EM++ G   ++ +  V++  LC+N   D A+ LL+ +   +V+ +  T+N ++   
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              G+    KELF ++ + G   +  +Y+++I    K +  EEA +L+
Sbjct: 714 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +  +S +IN  CK G+V+ G  I   ++++   PNVVTF SL++G C    + EA AL
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G EPN   Y TL++G C+ G    AL +F++M +         KP +V YSII
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG------VKPTSVLYSII 639

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GL +      AK++F +M       ++ TY  ++ G C  N  +EA  LL ++    V
Sbjct: 640 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 699

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + ++++ N++++ + K G+   A  L D +    + PN  TY+ ++              
Sbjct: 700 KFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADN 759

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           LF+S+E  G   D    N ++       EV +A
Sbjct: 760 LFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 792



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 10/271 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 561 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 618

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V ++ ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 619 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 678

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 679 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMFKVGRRQEAKELFDAISTY 732

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TY+ +I        + EA  L I +   G   +    N I+  L    ++  A
Sbjct: 733 GLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 792

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           S  L ++ + ++   A T + L   F   GK
Sbjct: 793 SNYLSIIGENNLTLEASTISLLASLFSREGK 823



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 79/155 (50%), Gaps = 1/155 (0%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P + + N++++   +  + D    ++  +++  + P+ F+Y +L+ GF   G++++   L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F+ M   G        N +I   CK KE+++A S+  ++   GI P + TY+ +  GL +
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +  ++A ++  +M       ++ TY + I G  +
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 183/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G  P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM     E G+V  PN+VT++ +IDG CK G+VD A E++ QM 
Sbjct: 221 GLCKESKMDDANKLFDEML----EKGLV--PNSVTFTTLIDGHCKNGWVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P++VTY +LI+G C   D  +A  L+ EM   G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A     +M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 159/320 (49%), Gaps = 8/320 (2%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L K   + +G       P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VHPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE-AKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +LF +M  + L PN VT+T+LI G C  N W + A  +  +M+ Q + P++V+ N ++  
Sbjct: 233 KLFDEMLEKGLVPNSVTFTTLIDGHC-KNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYG 291

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + D
Sbjct: 292 LCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLD 351

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
           D +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLK 411

Query: 357 EMQGNDVAADTCTYRTFIDG 376
           EMQ +       TY   ++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G 
Sbjct: 203 MHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGW 262

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L     P++VT+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTT 322

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 323 LIDGCCKEGDLDTAFEHRKMMIQEN------IRLDDVAYTALISGLCQEGRSVDAEKMLR 376

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           +M    L P+  TYT +I+ FC   D  +   LL EM   G  P+VV+ NV+MN
Sbjct: 377 EMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M 
Sbjct: 145 FNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMH 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV P+V + +V++N LCK  KMD+A++L D M++  + PN+ T+ TL+DG C  G ++
Sbjct: 205 ASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+   G+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLC 363



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 158/339 (46%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + ++G +      +       F     T   +++ L            +
Sbjct: 71  DIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    ++P+V TY+ LI+G C  +  ++A  L  EM+++G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG +D A  +   M+   + P+  TYN L+ G C  G + +  +L
Sbjct: 245 PNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 305 IDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQ 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  DT TY   I+  C +  V
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDV 403



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 100/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 148 LMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ +TY+ L++G C   K++   +LF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P +VTYN L +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 23/302 (7%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN---------GNGEIGVV 152
           + FT L +    P   T+   ++  C   H + +  +F E  +         G G    V
Sbjct: 2   SFFTWLSS----PANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAV 57

Query: 153 F----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           F          + +   +S +I    + GF+  A + +   +         T   ++   
Sbjct: 58  FAAILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHL 117

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                +    G   E+++ G   ++   N++M+  CK G +  A  + D + +  +RP+ 
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSV 177

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            +YNTLM+G+   G ++    L  +M + G   D ++Y++LING CK  ++++A  L++E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDE 237

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  KG+ P  VT+ TL  G  +    + A++++ +M    +  D  TY   I GLC +  
Sbjct: 238 MLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGD 297

Query: 383 VR 384
           ++
Sbjct: 298 LK 299


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 188/372 (50%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+    + +  D  L LF +++    +P + TY+++I   C++G+ +    +F  +
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PNV T+T LI  LC +S   +A  +   +   G  P+V+TYN LI+G C+ G +
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL +   M + N        PN  TY+ +I G C+   + KA  L  +M    L PNV
Sbjct: 396 ASALEILSLMESNNCS------PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY  LIHG C   D   A  LL  M + G+ P+  + +V ++ LCK G ++ A  L + 
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  ++ N   Y+TL+DG+C  GK++  + L   M S GC  +  +YN LI+GYCK K 
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            +EA  L + +  + I+P   TY  L   L +  + ++A  +F +M       D   Y  
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 373 FIDGLCVRPQVR 384
           FI   C   +++
Sbjct: 630 FIHAYCSHGRLK 641



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 186/368 (50%), Gaps = 33/368 (8%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           GL  D +TY+ LI  +C+   V     IF  +       N V++T+LI G C   R+ EA
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT----------------- 143
             LF+++    C P V TY  +I  LC+ G    ALN+FKEMT                 
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICS 353

Query: 144 --------------NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                         NG  E G++  P+ VTY+ +IDG CK+G    A E+   M+  N +
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLI--PSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PN  TY  LI GFC   + ++A  LL +M+++ +QPNVV+ N++++  CK G + +A +L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L LM +  + P+ +TY+  +D  C  G +   + LF S++  G K ++  Y+ LI+GYCK
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             +V +   L +++   G  P  +TYN+L  G  + +  + A  L   M   D+     T
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 370 YRTFIDGL 377
           Y   ID L
Sbjct: 592 YTILIDNL 599



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 173/331 (52%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L ++ ++D    +   +   GL P + TY+ LI+ +CK G  +    I
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +  +PN  T+  LI G C    I +A +L  K+     +PNV+TYN LI+G C+
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   M     E G+V  P+  TYS+ ID LCK G V++A+ LF  +K + +
Sbjct: 462 EGDLGSAYKLLSLMN----ESGLV--PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V Y++LI G+C     ++ + LL +M+  G  PN ++ N +++  CK      A  
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D+M++ D+ P A TY  L+D      + ++  ++F  M S G   D F Y   I+ YC
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
            +  +++A  L  ++  KGI P  + Y TLF
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLY-TLF 665



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 184/370 (49%), Gaps = 11/370 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           S+ +R+++      L  Y++L+    +   +     ++  +L     PN+ T  +++ G 
Sbjct: 155 SMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGY 214

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +VEA    +K+   G   +  TY +LI G CR  +   A  +F  M N     G 
Sbjct: 215 CKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNK----GC 270

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           +   N V+Y+ +I G C+   VD+A +LF QM  +N  P V TYT +I   C      EA
Sbjct: 271 L--RNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEA 328

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +  EM ++  QPNV +  V++  LC++   D+A ++L+ M++  + P+  TYN L+DG
Sbjct: 329 LNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDG 388

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +C  G      E+   MES  C  +  +YN LI G+C+ K + +A+SL +++  + ++P 
Sbjct: 389 YCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN 448

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FT 386
           VVTYN L HG  +      A KL   M  + +  D  TY  FID LC R  V      F 
Sbjct: 449 VVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFE 508

Query: 387 YARRKGNSGN 396
             + KG   N
Sbjct: 509 SLKEKGIKAN 518



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 173/368 (47%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  L +       L++FK +      P+++TY++LI   C+         I
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+VVT+ +LI G C +     A  + + +++  C PN  TYN LI G CR
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A++L  +M           +PN VTY+I+I G CKEG +  A +L   M    L
Sbjct: 427 GKNIHKAMSLLHKMLERK------LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL 480

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+  I   C      EA+ L   + ++G++ N V  + +++  CK GK+ +   
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF 540

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M+     PN+ TYN+L+DG+C        + L   M     +    +Y ILI+   
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLL 600

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ E ++A  +++++   G  P V  Y    H      + + A  L  +M    +  DT 
Sbjct: 601 KDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTM 660

Query: 369 TYRTFIDG 376
            Y  FID 
Sbjct: 661 LYTLFIDA 668



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 170/370 (45%), Gaps = 12/370 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+    K     +   L   +N  GL PD +TYS+ I+  CK G V     +
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N V +++LI G C   ++ +   L  K+ + GC PN ITYN+LI+G C+
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  L   M   + E      P   TY+I+ID L K+   D+A ++F QM     
Sbjct: 567 EKNFKEARLLVDIMIKRDIE------PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+V  YT+ IH +C      +A+ L+ +M  +G+ P+ +   + ++   + G +D A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M +    P+ +TY+ L+                +S  S G   +DFS     N + 
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS-----NCW- 734

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  + E  L L+ ++   G  P   TY     GL ++   E A +LF  M+    + +  
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794

Query: 369 TYRTFIDGLC 378
            Y + +   C
Sbjct: 795 IYNSLLGCSC 804



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 177/395 (44%), Gaps = 17/395 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    + K+    +SL  ++    L P++ TY+ILI+  CK G +   + +
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   P+  T++  I  LC    + EA +LF  LK  G + N + Y+TLI+G C+
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  +M +     G V  PN++TY+ +IDG CKE    +A+ L   M   ++
Sbjct: 532 VGKVSDGRFLLDKMLSA----GCV--PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TYT LI      +++++A  +  +M+  G  P+V      ++  C +G++ +A  
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M    + P+   Y   +D +   G I+    +   M  +GC+   ++Y+ LI    
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS 705

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K  E + S        G+       +  F   +     E  L LF +M  +  A +  
Sbjct: 706 NAKPKEVSSSSELSDLSSGVA------SNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNAN 759

Query: 369 TYRTFIDGLCV-----RPQVRFTYARRKGNSGNTN 398
           TY  FI GLC           F + + KG S N +
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 35/335 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+  L K+  +D    +F ++ S G  PD++ Y+  I+ +C  G++    V+
Sbjct: 587 PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVL 646

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+ + +T  I        I  A  +  ++   GCEP+  TY+ LI  L  
Sbjct: 647 ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSN 706

Query: 129 TGHTIV-----------------------------ALNLFKEMTNGNGEIGVVFKPNTVT 159
                V                              L+LF +M     E G    PN  T
Sbjct: 707 AKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKM----AEHGCA--PNANT 760

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y   I GLCK G ++ A  LF  MK +  +PN   Y SL+   C    + EA   L  M+
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +    P++ S  +++  L   G  + A R+    +QC+   +   +  L+DG    G  +
Sbjct: 821 ENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSD 880

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  +LF  ME+ GC+    +Y++LI G+   +E++
Sbjct: 881 KCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 10/164 (6%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P  +++   +  L K    +    LF  +   G  P+   Y+ L+ C C++G    
Sbjct: 752 HGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV--ITYNTL 122
                  ++ +   P++ +   L+ GL  E    +A  +F       CE N   + +  L
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF--LQCEYNYDEMVWKVL 869

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           I+GL + G +    +LF  M     +I      +  TYS++I+G
Sbjct: 870 IDGLLKKGLSDKCSDLFGIMETQGCQI------HPKTYSMLIEG 907


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 204/373 (54%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   + +  ++  + +FK+++S G+ P +   +  I+   K G+ +    I
Sbjct: 151 PNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCI 210

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA--ESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  ++     P+++++++++ G     +S + +   +F  +   G  PN   +N LIN  
Sbjct: 211 FDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAY 270

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A+ +F++M N     G++  P+TVT++ +I  LC+ G +D A   F  M   
Sbjct: 271 ARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDN 245
            + P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+N LCK G++  
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 384

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              ++D+MVQ   RPN  T+N+LM+G+CL G +     L  +M S+G + + + Y  L++
Sbjct: 385 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 444

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCKN  +++AL+++ ++  KG+KPT V Y+ + HGLF+ R+   A K+F EM  +    
Sbjct: 445 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 504

Query: 366 DTCTYRTFIDGLC 378
              TY   + GLC
Sbjct: 505 SIHTYGVVLGGLC 517



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 175/337 (51%), Gaps = 9/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P ++TY+ILI+C+ ++ +  LG  I GR+L++   P+  ++ SLI G   +  + +A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F ++   G  P ++  N++I  LC+      A ++ ++M +          P+  TYS+I
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLI 124

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGLCK   +DKA+ +  QM      PN +TY SLIHG+  +  WNE+  +  +M   GV
Sbjct: 125 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 184

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK--INRV 281
            P V + N  ++ L K+G+ + A  + D MV    +P+  +Y+T++ G+       +  V
Sbjct: 185 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 244

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  M + G   +   +NILIN Y +   +++A+ ++ ++  KG+ P  VT+ T+   
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 304

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  I + + AL  F  M    V      Y   I G C
Sbjct: 305 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 341



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 6/373 (1%)

Query: 6   PSPPPVSSFNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P P  +S   +L G   A +     V ++F  + + G+ P+ + ++ILIN + + G +  
Sbjct: 219 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 278

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +IF  +      P+ VTF ++I  LC   R+ +A   F  +   G  P+   Y  LI 
Sbjct: 279 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 338

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G  + A  L  EM N +     +  P    +S II+ LCKEG V + K++   M 
Sbjct: 339 GCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 393

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNVVT+ SL+ G+C   +  EA  LL  M   G++PN      +++  CKNG++D
Sbjct: 394 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 453

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M+   V+P +  Y+ ++ G     +    K++F  M   G      +Y +++
Sbjct: 454 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVL 513

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C+N   +EA  L  +L    +K  ++T+N +   +F++ + + A +LF  +    + 
Sbjct: 514 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLV 573

Query: 365 ADTCTYRTFIDGL 377
            +  TY   I  L
Sbjct: 574 PNIQTYSMMITNL 586



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 13/385 (3%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           RH   SPP + ++NIL+ C  +    D  L++  RL   GL PD ++YS LI  F K G+
Sbjct: 8   RH---SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 63

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +F  ++     P ++   S+IK LC    + +A ++  K+   G  P++ TY+ 
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+GLC++     A  + ++M     E G   +PN++TY+ +I G    G  +++  +F 
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRVFK 177

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--ELCK 239
           QM    + P V    S IH        NEAK +   MV +G +P+++S + +++      
Sbjct: 178 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 237

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +  + +   + +LM+   + PN   +N L++ +   G +++   +F  M++ G   D  +
Sbjct: 238 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 297

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +  +I+  C+   +++AL  +N +   G+ P+   Y  L  G     +  +A +L  EM 
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 357

Query: 360 GNDVAADTCTY-RTFIDGLCVRPQV 383
             D+      Y  + I+ LC   +V
Sbjct: 358 NKDIPPPGVKYFSSIINNLCKEGRV 382



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 42/348 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P    FNIL+   A+    D  + +F+ + + G+ PD  T++ +I+  C++G+       
Sbjct: 258 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 317

Query: 62  ----VSLGF----VIFGRILRSCF---------------------APNVVTFTSLIKGLC 92
               V +G      ++G +++ C                       P V  F+S+I  LC
Sbjct: 318 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 377

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E R+ E   +   +   G  PNV+T+N+L+ G C  G+   A  L   M +    IG+ 
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI- 432

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN   Y  ++DG CK G +D A  +F  M ++ + P  V Y+ ++HG   A     AK
Sbjct: 433 -EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 491

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  EM++ G   ++ +  V++  LC+N   D A+ LL+ +   +V+ +  T+N ++   
Sbjct: 492 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 551

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              G+    KELF ++ + G   +  +Y+++I    K +  EEA +L+
Sbjct: 552 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 599



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +  +S +IN  CK G+V+ G  I   ++++   PNVVTF SL++G C    + EA AL
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G EPN   Y TL++G C+ G    AL +F++M +         KP +V YSII
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG------VKPTSVLYSII 477

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GL +      AK++F +M       ++ TY  ++ G C  N  +EA  LL ++    V
Sbjct: 478 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 537

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + ++++ N++++ + K G+   A  L D +    + PN  TY+ ++              
Sbjct: 538 KFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADN 597

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           LF+S+E  G   D    N ++       EV +A
Sbjct: 598 LFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 630



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 10/271 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 399 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V ++ ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 457 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 516

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 517 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMFKVGRRQEAKELFDAISTY 570

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TY+ +I        + EA  L I +   G   +    N I+  L    ++  A
Sbjct: 571 GLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 630

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           S  L ++ + ++   A T + L   F   GK
Sbjct: 631 SNYLSIIGENNLTLEASTISLLASLFSREGK 661


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 183/373 (49%), Gaps = 8/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG--LFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++ ILL  L K+ H    L +  R++S G  + PD+   + +++  CK+G++    
Sbjct: 164 PDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI 223

Query: 67  VIFGRILRSCF--APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +     +R     APN VT+  L    C    I  A  +  +++  G  PNVIT NT+I 
Sbjct: 224 IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIG 283

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLCR G    AL  F+E      E     + N VTYS +         VD A ELF +M 
Sbjct: 284 GLCRVGRVGAALEFFREKRTVWPEA----RGNAVTYSTLASAFLHCNNVDMAMELFHEMA 339

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P+ V Y ++I G   A    +A      M   G + +  + N+++   C+  K+ 
Sbjct: 340 DHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLH 399

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL+ M    ++P+ +TYNTL+ G C  G  + V EL   M   GC+    ++  L+
Sbjct: 400 EAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLV 459

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GYCK  + +EAL ++  +    I+P  V YNTL   L + R+ + A+KLF EM+  +V 
Sbjct: 460 HGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519

Query: 365 ADTCTYRTFIDGL 377
           A+  TY   + GL
Sbjct: 520 ANVTTYNALLKGL 532



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 184/381 (48%), Gaps = 12/381 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S FN LL  L +  +   +  LF  +    + PD+ TY IL+N  CK G V     +
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 69  FGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLIN 124
             R+    S   P++    +++ GLC   R+ +A     +      GC PN +TYN L +
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             CR G   +A  +   M       GV   PN +T + II GLC+ G V  A E F + +
Sbjct: 249 AFCRVGDIGMACKIVARMEKE----GVA--PNVITMNTIIGGLCRVGRVGAALEFFREKR 302

Query: 185 --YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
             +     N VTY++L   F H N+ + A  L  EM D G +P+ V    +++ L + G+
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + +A      M +   + +A  YN L+ GFC   K++   EL   M+ +G + D ++YN 
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L++G CK  +      L   +   G +P+VVT+ TL HG  +  + + AL++F  M    
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           +  +T  Y T ID LC   +V
Sbjct: 483 IQPNTVIYNTLIDFLCKSREV 503



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 230 SNVIMNELCK--NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           S +++++L +  +   + A  L D +      P+   +N+L+      G +  + ELF S
Sbjct: 97  SALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTS 156

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL--PFKGIKPTVVTYNTLFHGLFEI 345
           M     K D  +Y IL+NG CK+  V +AL + + +  P   + P +   NT+  GL +I
Sbjct: 157 MRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKI 216

Query: 346 RQAERALKLFVEMQGNDV---AADTCTYRTFIDGLC 378
            + ++A+ +FV+ +   V   A +  TY    D  C
Sbjct: 217 GRLQQAI-IFVDERMRHVHGCAPNAVTYNCLADAFC 251


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 190/383 (49%), Gaps = 15/383 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-- 72
           N LL  L K + +  +  L +++  + + P + T+ ILIN  CK  ++     +F ++  
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKG 215

Query: 73  ----LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                +   AP+ + + +LI GLC   R  EA  L  K+++  C P   T+N LING CR
Sbjct: 216 EKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCR 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G   VA  LF EM N   E      PN +T + ++DG+CK   +  A E F  M+ + L
Sbjct: 276 SGEIEVAHKLFNEMENAQIE------PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGL 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VTYT  I+ FC+ N+ N+A   L EM   G  P+ V    ++  L + G++D+AS 
Sbjct: 330 KGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASS 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++  + +     +   YN L+  FC   K++R +E    ME  G K D  +YN LI+ + 
Sbjct: 390 VVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFS 449

Query: 309 KNKEVEEALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ--GNDVAA 365
           K    + A     ++   +G+ PTV TY  L H        + A+K+F EM    + V  
Sbjct: 450 KIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPP 509

Query: 366 DTCTYRTFIDGLCVRPQVRFTYA 388
           +T  Y   ID LC + QV F  +
Sbjct: 510 NTVIYNILIDSLCKQTQVNFALS 532



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N L+  L K    +  L L  ++ S    P   T++ LIN +C+ G++ +   +
Sbjct: 226 PDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKL 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   PNV+T  +L+ G+C  +RI  A   F  ++  G + N +TY   IN  C 
Sbjct: 286 FNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCN 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A+    EM+         F P+ V Y  +I GL + G +D A  +  ++K    
Sbjct: 346 VNNMNKAMEFLDEMSKDG-----CF-PDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGF 399

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V Y  LI  FC  N  + A+  L EM   GV+P+ V+ N +++   K G    A +
Sbjct: 400 CLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHK 459

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK--HDDFSYNILIN 305
            +  M + + + P  FTY  L+  +CL   I+   ++F  M ++  K   +   YNILI+
Sbjct: 460 FMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILID 519

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             CK  +V  ALSL +++ F+G+ P   TYN++F  L +    ++A KL   M       
Sbjct: 520 SLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNP 579

Query: 366 DTCTYRTFIDGL 377
           D  T     + L
Sbjct: 580 DYITMEILTEWL 591



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 53/339 (15%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L++ L     + EA A F+ L +     NV   N +IN L ++G    A+N+  EM    
Sbjct: 12  LLRRLGRIGMVDEALAAFSTLDSHAKNTNV--RNEIINLLLKSGRVDNAMNVLDEMLLPE 69

Query: 147 GEIGVVFKPNTVTYSIIIDGLCK-EGFVDKAKE-----LFLQMKYENLNPNVVTYTSLIH 200
            E    F+PN  T  I+ + L K +G   + KE     L  +    N+ P+ +  T LI 
Sbjct: 70  SE----FRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLIS 125

Query: 201 GFCHAND----WNEAKGLLI-------------------------------EMVDQGVQP 225
             C + +    WN    L++                               +M D  +QP
Sbjct: 126 KLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQP 185

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLM------VQCDVRPNAFTYNTLMDGFCLTGKIN 279
            V++  +++N LCK  ++D+A  + + M       +  V P+   YNTL+DG C  G+  
Sbjct: 186 TVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQE 245

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M S  C     ++N LINGYC++ E+E A  L+NE+    I+P V+T NTL 
Sbjct: 246 EALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLV 305

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G+ +  +   A++ F  MQ   +  +  TY  FI+  C
Sbjct: 306 DGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFC 344



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 132/312 (42%), Gaps = 42/312 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N L+  + K+    T +  F+ +   GL  +  TY++ IN FC +  ++     
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEF 355

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------- 111
              + +    P+ V + +LI GL    R+ +A+++ +KLK  G                 
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCK 415

Query: 112 ------------------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                              +P+ +TYNTLI+   + G+  +A    K+MT   G      
Sbjct: 416 KNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG-----L 470

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMK--YENLNPNVVTYTSLIHGFCHANDWNEA 211
            P   TY  +I   C    +D+A ++F +M      + PN V Y  LI   C     N A
Sbjct: 471 SPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFA 530

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             LL +M  +GV PN  + N I   L     +D A +L+D MV+    P+  T   L + 
Sbjct: 531 LSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEW 590

Query: 272 FCLTGKINRVKE 283
               G+I ++K+
Sbjct: 591 LSAVGEITKLKK 602



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  + ++ G LA+    D   S+  +L   G   D   Y++LI+ FCK  ++     
Sbjct: 366 PDAVVYYTLICG-LAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQE 424

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGL 126
               +  +   P+ VT+ +LI           A     K+ +  G  P V TY  LI+  
Sbjct: 425 WLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAY 484

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C   +   A+ +FKEM N    +     PNTV Y+I+ID LCK+  V+ A  L   MK+ 
Sbjct: 485 CLNNNIDEAIKIFKEMNN----VASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR 540

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
            + PN  TY S+       N  ++A  L+  MV+Q   P+ ++  ++   L   G++
Sbjct: 541 GVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    +NIL+  L K    +  LSL   +   G+ P+  TY+ +         +   F 
Sbjct: 508 PPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFK 567

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF--GC 112
           +  R++     P+ +T   L + L A   I       TKLK F  GC
Sbjct: 568 LMDRMVEQACNPDYITMEILTEWLSAVGEI-------TKLKKFTQGC 607


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 10/381 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N +L  L K +       LF  +   G+ P + TY+ LIN     G V+    +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + +++     PNV+T+TS+I  LC E  I +A  LF  +K  G  PN  TYN L++G C+
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L++E+ N     G++  PN V ++ +IDG CK     +AK++F  M    +
Sbjct: 261 GDDVNSAFVLYQELLNS----GLI--PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGV 314

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V  Y SL+ G   + D  EA  L  EM   G+ P+  + ++++  LC  G++  A+R
Sbjct: 315 APTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAAR 374

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L+ + +  V  NA  YN L+D +C  G +         M  +G + +  SY+ LI+G+ 
Sbjct: 375 FLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHS 434

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++ A+++Y E+  KGI+P VVTY  L HG  +    + A +   EM  N ++ +  
Sbjct: 435 KLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAI 494

Query: 369 TYRTFIDGLC----VRPQVRF 385
           T    +DGLC    V+  VRF
Sbjct: 495 TVSVLVDGLCRENRVQDAVRF 515



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 27/366 (7%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  +   G+ P+ YTY++L++  C+   V+  FV++  +L S   PN V FT+LI G C
Sbjct: 235 LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC 294

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R  EA  +F  +  FG  P V  YN+L++G  R+G    AL+L++EMT     +G+ 
Sbjct: 295 KAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMT----RLGLC 350

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+  T SI++ GLC  G +  A      ++ + +N N   Y +LI  +C   +  EA 
Sbjct: 351 --PDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEAL 408

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
                M + GV+PNVVS + +++   K GKM  A  +   MV   + PN  TY  L+ G 
Sbjct: 409 ATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 468

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK--- 329
              G I+        M   G   +  + ++L++G C+   V++A+    E    GIK   
Sbjct: 469 AKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVME--HSGIKYSD 526

Query: 330 ----------------PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
                           P    Y TL +GL+   Q   A KLF  M+ + + +D+ TY   
Sbjct: 527 IHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLL 586

Query: 374 IDGLCV 379
           I G C+
Sbjct: 587 IRGQCM 592



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 27/341 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F  L+    K K +     +F+ +   G+ P +  Y+ L++   + G       +
Sbjct: 281 PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSL 340

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + R    P+  T + +++GLC   +I  AA     ++  G   N   YN LI+  CR
Sbjct: 341 YQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCR 400

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL     MT    E+GV  +PN V+YS +IDG  K G +  A  ++ +M  + +
Sbjct: 401 NGNLEEALATCTRMT----EVGV--EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTYT+LIHG       + A     EM++ G+ PN ++ +V+++ LC+  ++ +A R
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVR 514

Query: 249 LLDLMVQCDVR-------------------PNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            +  M    ++                   PN+  Y TL+ G  L G+     +LF  M 
Sbjct: 515 FV--MEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMR 572

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             G   D F+Y +LI G C    V  A+ LY ++   G+KP
Sbjct: 573 KSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 196/367 (53%), Gaps = 8/367 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            NI+L  L +N      + L + +    + PD+ +Y+ LIN  CK  ++     +   + 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +   PN VT T+L+ GLC + R+ EA  L   +K  G + +V+ Y TLI+G C  G+  
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
               LF EM      +G     N VTYS ++ GLC+ G   +A  +   M    ++P+VV
Sbjct: 121 RGKELFDEM------LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT LI G C       A  LL  MV++G +P+ V+ NV+++ LCK G + +A ++L +M
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDD-FSYNILINGYCKNK 311
           ++   + +  TYNTLM G C  GK++   +LF SM ++  C   + F++N+LI G CK  
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            + +A+ ++ ++  KG    +VTYN L  G  +  + + A++L+ ++       ++ TY 
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 372 TFIDGLC 378
             IDG C
Sbjct: 355 ILIDGFC 361



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +   L+  L K+   D  + L + +   G   D+  Y  LI+ FC  G +  G  +
Sbjct: 66  PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 125

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    + NVVT++ L+ GLC   +  EA  +   +   G  P+V+TY  LI+GLC+
Sbjct: 126 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 185

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L   M    GE     +P+ VTY++++ GLCKEG V  A ++   M  +  
Sbjct: 186 DGRATHAMDLLNLMVE-KGE-----EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNA 246
             +VVTY +L+ G C     +EA  L   M D    ++PNV + N+++  LCK G++  A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            ++   MV+     N  TYN L+ G    GKI    EL+  +  +G   + F+Y+ILI+G
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 359

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK + +  A  L+ E+   G+ P +  YNTL   L +    E+A  LF EM   +   D
Sbjct: 360 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 419

Query: 367 TCTYRTFIDG 376
             ++ T IDG
Sbjct: 420 IISFNTMIDG 429



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 180/380 (47%), Gaps = 8/380 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  L K+      + L   +   G  P   TY++L++  CK G V  
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 226

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGC-EPNVITYNTL 122
            F I   ++      +VVT+ +L+KGLC + ++ EA  LF  +     C EPNV T+N L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GLC+ G    A+ + ++M    G  G     N VTY++++ G  K G + +A EL+ Q
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQ 340

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +      PN  TY+ LI GFC     N AKGL  EM   G+ P +   N +M  LCK G 
Sbjct: 341 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 400

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           ++ A  L   M   +  P+  ++NT++DG    G    VKEL + M  MG + D  +++ 
Sbjct: 401 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 460

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN   K  E++EA S    +   G  P  + Y++L  GL         + L  +M    
Sbjct: 461 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 363 VAADTCTYRTFIDGLCVRPQ 382
              D     T +  LC   Q
Sbjct: 521 TVLDRKIVSTILTCLCHSIQ 540



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 184/367 (50%), Gaps = 10/367 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+     N + D    LF  +   G+  ++ TYS L++  C++GQ      +   + 
Sbjct: 106 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+VVT+T LI GLC + R   A  L   +   G EP+ +TYN L++GLC+ G  I
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN---LNP 190
            A  + + M           K + VTY+ ++ GLC +G VD+A +LF  M ++N   L P
Sbjct: 226 DAFKILRMMIEKGK------KADVVTYNTLMKGLCDKGKVDEALKLFNSM-FDNENCLEP 278

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV T+  LI G C      +A  +  +MV +G   N+V+ N+++    K GK+  A  L 
Sbjct: 279 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 338

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             ++     PN+FTY+ L+DGFC    +N  K LF  M + G     F YN L+   CK 
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 398

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +E+A SL+ E+     +P ++++NT+  G  +    +   +L ++M    +  D  T+
Sbjct: 399 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 458

Query: 371 RTFIDGL 377
            T I+ L
Sbjct: 459 STLINRL 465



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 174/319 (54%), Gaps = 17/319 (5%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++KGLC    + EA  L  ++      P++++YNTLINGLC+      A+ L  EM    
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM---- 59

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E    F PN+VT + ++DGLCK+G +D+A EL   MK +  + +VV Y +LI GFC+  
Sbjct: 60  -EAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           + +  K L  EM+ +G+  NVV+ + +++ LC+ G+   A+ +L+ M +  + P+  TY 
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+DG C  G+     +L   M   G +  + +YN+L++G CK   V +A  +   +  K
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRTFIDGLCVRPQVR 384
           G K  VVTYNTL  GL +  + + ALKLF  M  N+  +  +  T+   I GLC   + R
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC--KEGR 295

Query: 385 FTYA-------RRKGNSGN 396
            T A        +KG+ GN
Sbjct: 296 LTKAVKIHRKMVKKGSCGN 314



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 52/386 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+LL  L K         + + +   G   D+ TY+ L+   C  G+V     +
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265

Query: 69  FGRIL--RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  +    +C  PNV TF  LI GLC E R+ +A  +  K+   G   N++TYN L+ G 
Sbjct: 266 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 325

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG-------------------- 166
            + G    A+ L+K++ +      + F PN+ TYSI+IDG                    
Sbjct: 326 LKAGKIKEAMELWKQVLD------LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379

Query: 167 ---------------LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
                          LCKEG +++AK LF +M   N  P+++++ ++I G   A D+   
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           K L ++MV+ G++P+ ++ + ++N L K G++D A   L+ MV     P+A  Y++L+ G
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP--FKGI- 328
               G    +  L   M + G   D    + ++   C + +  + + L   LP  F+G  
Sbjct: 500 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL---LPTFFQGTS 556

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKL 354
           +   ++ N L   L ++ Q+   L+L
Sbjct: 557 EGASISCNEL---LMQLHQSHPKLQL 579


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 5/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L KN    T   +++++  +G+ PD++  SI++N FCK G+V      
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 214

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      PN+VT+ SLI G  +   +  A  +   +   G   NV+TY  LI G C+
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + + M     E  +V  P+   Y ++IDG C+ G +D A  L  +M    L
Sbjct: 275 QCKMDEAEKVLRGMQE---EAALV--PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+    SLI+G+C   + +EA+G++  MVD  ++P+  S N +++  C+ G    A  
Sbjct: 330 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+Q  + P   TYNTL+ G C  G  +   +++  M   G   D+  Y+ L++G  
Sbjct: 390 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  E A +L+ ++  +G   + +T+NT+  GL ++ +   A ++F +M+    + D  
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509

Query: 369 TYRTFIDGLC 378
           TYRT IDG C
Sbjct: 510 TYRTLIDGYC 519



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 193/399 (48%), Gaps = 32/399 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL  L +   +D  L ++  +   G+ PD   YS L++   KM        +
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL   F  + +TF ++I GLC   ++VEA  +F K+K  GC P+ ITY TLI+G C+
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 129 TGHTIVALN-----------------------LFK-----EMTNGNGEIGVV-FKPNTVT 159
             +   A                         LFK     E+T+   E+G+    PN VT
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +IDG CKEG +DKA   + +M    L+ N++  ++++ G       +EA  L+ +MV
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D G  P+       +    +   +   +  LD   +  + PN   YN  + G C TGK++
Sbjct: 641 DHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 697

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +  F  +   G   D+F+Y  LI+GY     V+EA  L +E+  +G+ P +VTYN L 
Sbjct: 698 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 757

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +GL +    +RA +LF ++    +  +  TY T IDG C
Sbjct: 758 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 796



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 30/400 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   +I++    K+   D      K++ ++G+ P++ TY  LIN +  +G V     +
Sbjct: 190 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLINGLC 127
              +     + NVVT+T LIKG C + ++ EA  +   ++      P+   Y  LI+G C
Sbjct: 250 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 309

Query: 128 RTGHTIVALNLFKEM---------------TNG---NGEI----GVV-------FKPNTV 158
           RTG    A+ L  EM                NG    GEI    GV+        KP++ 
Sbjct: 310 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 369

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ ++DG C+EG   +A  L  +M  E + P V+TY +L+ G C    +++A  +   M
Sbjct: 370 SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 429

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +GV P+ V  + +++ L K    + AS L   ++      +  T+NT++ G C  GK+
Sbjct: 430 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 489

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +E+F  M+ +GC  D  +Y  LI+GYCK   V +A  +   +  + I P++  YN+L
Sbjct: 490 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 549

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             GLF+ R+      L  EM    +  +  TY   IDG C
Sbjct: 550 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 589



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 190/366 (51%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+++L    +       L +F  +   G  P L + + L+N   K G+      ++ +++
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    P+V   + ++   C + ++ EAA    K++  G EPN++TY++LING    G   
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNV 192
            A  + K M+    E GV    N VTY+++I G CK+  +D+A+++   M+ E  L P+ 
Sbjct: 245 AAKGVLKFMS----EKGV--SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  LI G+C     ++A  LL EM+  G++ N+   N ++N  CK G++  A  ++  
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV  +++P++++YNTL+DG+C  G  +    L   M   G +    +YN L+ G C+   
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++AL +++ +  +G+ P  V Y+TL  GLF++   E A  L+ ++          T+ T
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 373 FIDGLC 378
            I GLC
Sbjct: 479 MISGLC 484



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 42/384 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V ++ +L+    K    D    + + +     L PD   Y +LI+ +C+ G++     + 
Sbjct: 262 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 321

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             +LR     N+    SLI G C    I EA  + T++  +  +P+  +YNTL++G CR 
Sbjct: 322 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 381

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           GHT  A NL  +M     E      P  +TY+ ++ GLC+ G  D A +++  M    + 
Sbjct: 382 GHTSEAFNLCDKMLQEGIE------PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 435

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ V Y++L+ G     ++  A  L  +++ +G   + ++ N +++ LCK GKM  A  +
Sbjct: 436 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 495

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFC----------LTGKINR------------------- 280
            D M      P+  TY TL+DG+C          + G + R                   
Sbjct: 496 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 555

Query: 281 ------VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
                 V +L   M   G   +  +Y  LI+G+CK   +++A S Y E+   G+   ++ 
Sbjct: 556 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 615

Query: 335 YNTLFHGLFEIRQAERALKLFVEM 358
            +T+  GL+ + + + A  L  +M
Sbjct: 616 CSTMVSGLYRLGRIDEANLLMQKM 639



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 61/328 (18%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K         +F ++  +G  PD  TY  LI+ +CK   V   F + G +
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY------------- 119
            R   +P++  + SLI GL    R+VE   L T++   G  PN++TY             
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 120 ----------------------NTLINGLCRTGHTIVALNLFKEMTNG------------ 145
                                 +T+++GL R G    A  L ++M +             
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654

Query: 146 --------------NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
                         +        PN + Y+I I GLCK G VD A+  F  +  +   P+
Sbjct: 655 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY +LIHG+  A + +EA  L  EM+ +G+ PN+V+ N ++N LCK+  +D A RL  
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            + Q  + PN  TYNTL+DG+C  G ++
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMD 802



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 66/129 (51%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +NI +  L K    D     F  L+  G  PD +TY  LI+ +   G V   F +   +L
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    PN+VT+ +LI GLC    +  A  LF KL   G  PNV+TYNTLI+G C+ G+  
Sbjct: 743 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 802

Query: 134 VALNLFKEM 142
            A  L  +M
Sbjct: 803 AAFKLKDKM 811



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 24/334 (7%)

Query: 72  ILRSCFAPNVVTFT---SLIKGLCAESRIVEAAAL-----FTKLKAFGCEPNVITYNTLI 123
           +LR C A + + F     ++  +    R+   A+L      +K + F   PNV +Y  L+
Sbjct: 18  LLRRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNF--RPNVKSYCKLV 75

Query: 124 NGLCRTG---------HTIVALNLFKEMTN--GNGEIGVV--FKPNTVTYSIIIDGLCKE 170
           + L R           + +V L  FK+  N   +  +GV   F  +   + +I+    ++
Sbjct: 76  HILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEK 135

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G    A  +F  M      P++ +  SL++      + + A  +  +M+  G+ P+V   
Sbjct: 136 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 195

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           ++++N  CK+GK+D A+  +  M    V PN  TY++L++G+   G +   K +   M  
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 255

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAE 349
            G   +  +Y +LI GYCK  +++EA  +   +  +  + P    Y  L  G     + +
Sbjct: 256 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 315

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            A++L  EM    +  +     + I+G C R ++
Sbjct: 316 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 349



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 45/73 (61%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K+++ D    LF +L+  GLFP++ TY+ LI+ +CK+G +   F +
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807

Query: 69  FGRILRSCFAPNV 81
             +++    +P++
Sbjct: 808 KDKMIEEGISPSI 820


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 195/376 (51%), Gaps = 9/376 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   P PP    ++++L    +   + + + + + L++ G   D+   ++++N  C  G 
Sbjct: 188 RGCAPIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +   +      P+VV++ +++KGLC   R      L  ++    C PN++T+NT
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+ LCR G       +  +M     E G    P+   Y+ IIDG+CKEG ++ A E+  
Sbjct: 305 LISYLCRNGLFERVHEVLAQMV----EHGCT--PDIRMYATIIDGICKEGHLEVAHEILN 358

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    L PNVV Y +L+ G C A  W E + LL EM D+    + V+ N++++  C+NG
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D    LL+ M++    P+  TY T+++GFC  G I+    L  SM + GCK +  SY 
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I++ G C  +   +A  L +++  +G     +T+NTL + L +    E+A++L  +M  N
Sbjct: 479 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 362 DVAADTCTYRTFIDGL 377
             + D  +Y T IDGL
Sbjct: 539 GCSPDLISYSTVIDGL 554



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N +L  L   K +  V  L + +  +   P++ T++ LI+  C+ G       +
Sbjct: 262 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNTL+ GLC 
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    L  EM + +  +      + VT++I++D  C+ G VD+  EL  QM     
Sbjct: 382 AERWEETEELLAEMFDKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT++I+GFC     +EA  LL  M   G +PN +S  +++  LC   +  +A  
Sbjct: 436 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+Q     N  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  
Sbjct: 496 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 555

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +EAL L N +  KG+ P  + Y+++   L    +  + +++F  +Q   + +D  
Sbjct: 556 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 615

Query: 369 TYRTFIDGLCVR 380
            Y   I  LC R
Sbjct: 616 LYNAVISSLCKR 627



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +FN L+  L +N  ++ V  +  ++   G  PD+  Y+ +I+  CK G + +   
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+      PNVV + +L+KGLC+  R  E   L  ++    C  + +T+N L++  C
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 415

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + L ++M     E G +  P+ +TY+ +I+G CKEG +D+A  L   M    
Sbjct: 416 QNGLVDRVIELLEQML----EHGCM--PDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN ++YT ++ G C A  W +A+ L+ +M+ QG   N ++ N ++N LCK G ++ A 
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M+     P+  +Y+T++DG    GK +   EL   M + G   +   Y+ + +  
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +   + + + +++ +    I+   V YN +   L +  + ERA++    M  +    + 
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649

Query: 368 CTYRTFIDGL 377
            TY   I GL
Sbjct: 650 STYTILIRGL 659



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L   + ++    L   +       D  T++IL++ FC+ G V     +
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + A GC+PN I+Y  ++ GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A +L  +M      +      N +T++ +I+ LCK+G V++A EL  QM     
Sbjct: 487 AERWVDAEDLMSQMIQQGCPL------NPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 540

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A   +EA  LL  MV++G+ PN +  + I + L + G+++   +
Sbjct: 541 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 600

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C  G+  R  E    M S GC  ++ +Y ILI G  
Sbjct: 601 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 660

Query: 309 KNKEVEEALSLYNELPFKG 327
               V+EA  +  EL  KG
Sbjct: 661 SEGFVKEAQEMLTELCSKG 679



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 6/340 (1%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           ++ + P+ YTY  ++   C  G+++    +   + R   AP    +  +++  C      
Sbjct: 152 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 211

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A  +   L A GC  +V   N ++N +C  G    AL+L +++ +   E      P+ V
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE------PDVV 265

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ ++ GLC        +EL  +M      PN+VT+ +LI   C    +     +L +M
Sbjct: 266 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 325

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V+ G  P++     I++ +CK G ++ A  +L+ M    ++PN   YNTL+ G C   + 
Sbjct: 326 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 385

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +EL   M    C  DD ++NIL++ +C+N  V+  + L  ++   G  P V+TY T+
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 445

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G  +    + A+ L   M       +T +Y   + GLC
Sbjct: 446 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 130/332 (39%), Gaps = 47/332 (14%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V  +SLI+ LCA  R  EAA   +          V+ YN ++ G CR G    A  L   
Sbjct: 96  VRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA- 151

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                    V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++  
Sbjct: 152 --------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 203

Query: 202 FCHANDW-----------------------------------NEAKGLLIEMVDQGVQPN 226
            C    +                                   +EA  LL ++   G +P+
Sbjct: 204 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPD 263

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VVS N ++  LC   +      L++ MV+    PN  T+NTL+   C  G   RV E+  
Sbjct: 264 VVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLA 323

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNTL  GL    
Sbjct: 324 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 383

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E   +L  EM   D   D  T+   +D  C
Sbjct: 384 RWEETEELLAEMFDKDCPLDDVTFNILVDFFC 415


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 183/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G + +
Sbjct: 99  HKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRV 158

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 159 ALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 218

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 219 GLCKESKMDDANELFDEMLDK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEVYKQML 272

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ +S   +++  CK G ++
Sbjct: 273 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLE 332

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G + D  +Y ++I
Sbjct: 333 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMII 392

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V     L  E+   G  P+VVTYN L +G
Sbjct: 393 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 117 KLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVV 176

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 177 SFNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKMDDAN 230

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 231 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGL 290

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  +Y TL+DG C  G +    E    M     + DD
Sbjct: 291 CKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 350

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G++P   TY  + +   +        KL  E
Sbjct: 351 VAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKE 410

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 411 MQRDGHVPSVVTYNVLMNG 429



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 69  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFY 128

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VAL++F  +T          +P+ V+++ ++
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWG------LRPSVVSFNTLM 182

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+D+G+ 
Sbjct: 183 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 242

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L
Sbjct: 243 PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 302

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  SY  LI+G CK  ++E A      +  + I+   V Y  L  GL +
Sbjct: 303 IDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQ 362

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  DT TY   I+  C +  V
Sbjct: 363 EGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDV 401



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 127/235 (54%), Gaps = 10/235 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 201 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 260

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   ++ ++L    +P+++T+ +LI GLC +  + +A  L  +++  G +P+ I+Y T
Sbjct: 261 VDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTT 320

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 321 LIDGCCKEGDLETAFEHRKRMIQEN------IRLDDVAYTALISGLCQEGRSIDAEKMLR 374

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           +M    L P+  TYT +I+ FC   D W  +K LL EM   G  P+VV+ NV+MN
Sbjct: 375 EMLSVGLRPDTGTYTMIINEFCKKGDVWTGSK-LLKEMQRDGHVPSVVTYNVLMN 428



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A  +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 146 LMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 205

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 206 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 265

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM+   +  D  +Y T IDG 
Sbjct: 266 EVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGC 325

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 326 CKEGDLETAFEHRK 339



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A NL + + +  G      VF          + +   +S +I 
Sbjct: 19  SYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLIT 78

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +        E+++ G   
Sbjct: 79  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPA 138

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G +  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 139 SLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 198

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 199 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 258

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 259 GRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 297


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 195/386 (50%), Gaps = 20/386 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F ILL  L ++   +    L  R+  +G  PD   Y+ LI+ + K       F  
Sbjct: 40  PDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 99

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++   P VVT+T+++ GLC   R  +A  L  +++  GC PN+ TYN ++ GLC 
Sbjct: 100 LAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 159

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + +EM          + P+ VTY+  I GLCK   VD+A++   +M    +
Sbjct: 160 ERKLDEAKKMLEEMAVRG------YFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 210

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV+YT++I+G C + D + A  +L  M ++G  P+VV+ + +++  CK G+++ A  
Sbjct: 211 TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M++   RPN   YN+L+      G I + +++ V ME  G   D  SYN  I+G C
Sbjct: 271 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330

Query: 309 KNKEVEEALSLYNELPFKGIKP----------TVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K + V++A ++++ +  +G  P           ++ Y  L  GL +  + + A  LF ++
Sbjct: 331 KAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKV 390

Query: 359 QGNDVAA-DTCTYRTFIDGLCVRPQV 383
               +   D   Y   +D  C R Q+
Sbjct: 391 LDEKICEPDVFFYNVMLDSHCKRRQI 416



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 189/378 (50%), Gaps = 19/378 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N LL  L +   +D   ++F+ +      PD +T++IL+   C+  Q+     + G
Sbjct: 7   VFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLG 66

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R+      P+   + +LI G        +A     ++    C P V+TY  +++GLC+  
Sbjct: 67  RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAE 126

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A+ L  EM +          PN  TY++I++GLC+E  +D+AK++  +M      P
Sbjct: 127 RTRDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTY S I G C  +  +EA+  L  M    V P+VVS   ++N LCK+G +D+ASR+L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M      P+  TY++L+DGFC  G++ R   L  SM  +GC+ +  +YN L+    + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-------- 362
             + +A  +  E+  +G  P VV+YN    GL +  + ++A  +F  M            
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 363 --VAADTCTYRTFIDGLC 378
             +  D   Y   +DGLC
Sbjct: 358 SMLIVDILLYTVLLDGLC 375



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 191/385 (49%), Gaps = 22/385 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  V+  NI+ G     +  D V  L   +   G  P++YTY++++   C+  ++  
Sbjct: 107 HCLPTVVTYTNIVDGLCKAERTRDAV-KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDE 165

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   +    + P+VVT+ S IKGLC   R+ EA     ++      P+V++Y T+IN
Sbjct: 166 AKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVIN 222

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC++G    A  +   M+N          P+ VTYS +IDG CK G V++A  L   M 
Sbjct: 223 GLCKSGDLDSASRMLDHMSNRG------CTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 276

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PN+V Y SL+          +A+ +L+EM  +G  P+VVS N  ++ LCK  ++ 
Sbjct: 277 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 336

Query: 245 NASRLLDLMVQCDVRPNAFTYN----------TLMDGFCLTGKINRVKELFVS-MESMGC 293
            A  + D MV+    PNA +Y+           L+DG C  G+ +    LF   ++   C
Sbjct: 337 KAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 396

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D F YN++++ +CK +++++AL ++ ++  K     VVT+N L HGL    +   A  
Sbjct: 397 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAET 455

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           + + M       D  TY T +D +C
Sbjct: 456 MLLTMVDEGFIPDFVTYGTLVDAMC 480



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 9/349 (2%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +G   +++TY+ L+    +  +      +F  ++     P+  TF  L++GLC  +++ +
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  L  ++K  GC P+   YN LI+G  +      A     EM   +        P  VT
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH------CLPTVVT 114

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ I+DGLCK      A +L  +M+ +  +PN+ TY  ++ G C     +EAK +L EM 
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  P+VV+ N  +  LCK  ++D A + L  M    V P+  +Y T+++G C +G ++
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLD 231

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +   M + GC  D  +Y+ LI+G+CK  EVE A+ L + +   G +P +V YN+L 
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             L  +    +A  + VEM+      D  +Y   IDGLC   +V+   A
Sbjct: 292 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 27/383 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++  L + +  D    + + +   G FPD+ TY+  I   CK  +V      
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+VV++T++I GLC    +  A+ +   +   GC P+V+TY++LI+G C+
Sbjct: 205 LARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L   M      + +  +PN V Y+ ++  L + G + KA+++ ++M+    
Sbjct: 262 GGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN----------VIMNELC 238
            P+VV+Y + I G C A    +AK +   MV++G  PN  S +          V+++ LC
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375

Query: 239 KNGKMDNA----SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           K G+ D A    S++LD  +     P+ F YN ++D  C   +I++  ++   M    C 
Sbjct: 376 KGGRFDEACALFSKVLDEKI---CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC- 431

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  ++NIL++G C +  + +A ++   +  +G  P  VTY TL   + +  ++  AL+L
Sbjct: 432 CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 491

Query: 355 FVEMQGNDVAADTCTYRTFIDGL 377
           F E        D  TY   I GL
Sbjct: 492 FEEAVKGGCVPDVVTYSALITGL 514



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 21/361 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N  +  L K    D       R+    + PD+ +Y+ +IN  CK G +     +
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRM 236

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT++SLI G C    +  A  L   +   GC PN++ YN+L+  L R
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   A ++  EM          F P+ V+Y+  IDGLCK   V KAK +F +M     
Sbjct: 297 LGHIGKAEDMLVEMERRG------FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 189 NPN----------VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNEL 237
            PN          ++ YT L+ G C    ++EA  L  +++D+ + +P+V   NV+++  
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  ++D A ++   M++ +   N  T+N L+ G C+  +++  + + ++M   G   D 
Sbjct: 411 CKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  L++  CK  +   AL L+ E    G  P VVTY+ L  GL     AE A  LF +
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529

Query: 358 M 358
           +
Sbjct: 530 L 530



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 6/351 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P V S+  ++  L K+   D+   +   +++ G  PD+ TYS LI+ FCK G+V   
Sbjct: 209 PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERA 268

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +L+    PN+V + SL+  L     I +A  +  +++  G  P+V++YN  I+G
Sbjct: 269 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328

Query: 126 LCRTGHTIVALNLFKEMTNG----NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LC+      A  +F  M       N     +   + + Y++++DGLCK G  D+A  LF 
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS 388

Query: 182 QMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           ++  E +  P+V  Y  ++   C     ++A  +  +M+++    NVV+ N++++ LC +
Sbjct: 389 KVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVD 447

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            ++ +A  +L  MV     P+  TY TL+D  C  GK     ELF      GC  D  +Y
Sbjct: 448 DRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTY 507

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           + LI G       EEA  L+ +L  +   P   T   L   L  + +  +A
Sbjct: 508 SALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 195/376 (51%), Gaps = 9/376 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   P PP    ++++L    +   + + + + + L++ G   D+   ++++N  C  G 
Sbjct: 151 RGCAPIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +   +      P+VV++ +++KGLC   R      L  ++    C PN++T+NT
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+ LCR G       +  +M     E G    P+   Y+ IIDG+CKEG ++ A E+  
Sbjct: 268 LISYLCRNGLFERVHEVLAQMV----EHGCT--PDIRMYATIIDGICKEGHLEVAHEILN 321

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    L PNVV Y +L+ G C A  W E + LL EM D+    + V+ N++++  C+NG
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D    LL+ M++    P+  TY T+++GFC  G I+    L  SM + GCK +  SY 
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I++ G C  +   +A  L +++  +G     +T+NTL + L +    E+A++L  +M  N
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 362 DVAADTCTYRTFIDGL 377
             + D  +Y T IDGL
Sbjct: 502 GCSPDLISYSTVIDGL 517



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N +L  L   K +  V  L + +  +   P++ T++ LI+  C+ G       +
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNTL+ GLC 
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    L  EM + +  +      + VT++I++D  C+ G VD+  EL  QM     
Sbjct: 345 AERWEETEELLAEMFDKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLERGC 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT++I+GFC     +EA  LL  M   G +PN +S  +++  LC   +  +A  
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+Q     N  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +EAL L N +  KG+ P  + Y+++   L    +  + +++F  +Q   + +D  
Sbjct: 519 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 578

Query: 369 TYRTFIDGLCVR 380
            Y   I  LC R
Sbjct: 579 LYNAVISSLCKR 590



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +FN L+  L +N  ++ V  +  ++   G  PD+  Y+ +I+  CK G + +   
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+      PNVV + +L+KGLC+  R  E   L  ++    C  + +T+N L++  C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + L ++M     E G +  P+ +TY+ +I+G CKEG +D+A  L   M    
Sbjct: 379 QNGLVDRVIELLEQML----ERGCM--PDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN ++YT ++ G C A  W +A+ L+ +M+ QG   N ++ N ++N LCK G ++ A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M+     P+  +Y+T++DG    GK +   EL   M + G   +   Y+ + +  
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +   + + + +++ +    I+   V YN +   L +  + ERA++    M  +    + 
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612

Query: 368 CTYRTFIDGL 377
            TY   I GL
Sbjct: 613 STYTILIRGL 622



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 163/319 (51%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L   + ++    L   +       D  T++IL++ FC+ G V     +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + A GC+PN I+Y  ++ GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A +L  +M      +      N +T++ +I+ LCK+G V++A EL  QM     
Sbjct: 450 AERWVDAEDLMSQMIQQGCPL------NPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A   +EA  LL  MV++G+ PN +  + I + L + G+++   +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C  G+  R  E    M S GC  ++ +Y ILI G  
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623

Query: 309 KNKEVEEALSLYNELPFKG 327
               V+EA  +  EL  KG
Sbjct: 624 SEGFVKEAQEMLTELCSKG 642



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 161/340 (47%), Gaps = 6/340 (1%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           ++ + P+ YTY  ++   C  G+++    +   + R   AP    +  +++  C      
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A  +   L A GC  +V   N ++N +C  G    AL+L +++ +   E      P+ V
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE------PDVV 228

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ ++ GLC        +EL  +M      PN+VT+ +LI   C    +     +L +M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           V+ G  P++     I++ +CK G ++ A  +L+ M    ++PN   YNTL+ G C   + 
Sbjct: 289 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +EL   M    C  DD ++NIL++ +C+N  V+  + L  ++  +G  P V+TY T+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G  +    + A+ L   M       +T +Y   + GLC
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 130/332 (39%), Gaps = 47/332 (14%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V  +SLI+ LCA  R  EAA   +          V+ YN ++ G CR G    A  L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA- 114

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                    V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++  
Sbjct: 115 --------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 166

Query: 202 FCHANDW-----------------------------------NEAKGLLIEMVDQGVQPN 226
            C    +                                   +EA  LL ++   G +P+
Sbjct: 167 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPD 226

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VVS N ++  LC   +      L++ MV+    PN  T+NTL+   C  G   RV E+  
Sbjct: 227 VVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNTL  GL    
Sbjct: 287 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E   +L  EM   D   D  T+   +D  C
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL-FPDLYTYSILINCFCKMGQVSLGFV 67
           P +  FN+L G +AK++H+ T +SL K L+S+G    D+ T +ILINC C++ + +LGF 
Sbjct: 74  PCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFA 133

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAES---RIVEAAALFTKLKAF---GCEPNVITYNT 121
           + G + +    P +VT  ++  GLC  +   +I + +     LK       EPNV+ YN 
Sbjct: 134 VLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNA 193

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVV-FKPNTVTYSIIIDGLCKE-GFVDKAKEL 179
           +++GLC+ G    AL LF EM       GVV  +PN VTY+ +I GLC E G   +   L
Sbjct: 194 ILDGLCKRGLVGEALGLFYEM-------GVVNVEPNVVTYNCLIQGLCGEVGGWREGVGL 246

Query: 180 FLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           F +M  E  + P+V T++ L++GFC       A+ ++  M+  GV+ NVV+ N +++  C
Sbjct: 247 FNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306

Query: 239 KNGKMDNASRLLDLMVQCD--VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
              +M+ A R+ DLMV+      P+  TYN+L+ G+C   K+N+   L   M   G   D
Sbjct: 307 LRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPD 366

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            F++  LI G+ +  +   A  L+  +  +G  P + T   +  GL++      A+ LF 
Sbjct: 367 VFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFR 426

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M+ + +  D   Y   +DG+C
Sbjct: 427 AMEKSGLDLDIVIYNIMLDGMC 448



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 180/354 (50%), Gaps = 11/354 (3%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V ++N L+ G   +   +   + LF  +    G+ PD+ T+SIL+N FCK G +    
Sbjct: 221 PNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAE 280

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLIN 124
            + G ++R     NVVT+ SLI G C  +R+ EA  +F  +  +  GC P+V+TYN+LI+
Sbjct: 281 SMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIH 340

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+      A++L  EM      +G    P+  T++ +I G  + G    AKELF+ MK
Sbjct: 341 GWCKVKKVNKAMSLLSEM------VGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMK 394

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +   P + T   ++ G       +EA  L   M   G+  ++V  N++++ +CK GK++
Sbjct: 395 DQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLN 454

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A +LL  ++   ++ +++T+N ++ G C  G ++  +EL   M+  GC  +  SYN+ +
Sbjct: 455 DARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 514

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            G  +  ++  +      +  KG  P   T   L        + + A + F+++
Sbjct: 515 QGLLRKYDISRSRKYLQIMKDKGF-PVDATTAELLIRFLSANEEDNAFQEFLQI 567



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 284 LFVSMESMGCKHDDF-SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL---- 338
           L  ++ S+G +  D  + NILIN  C+ ++     ++   +   G++PT+VT NT+    
Sbjct: 98  LIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGL 157

Query: 339 --FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              +GL +I     AL+   +M   ++  +   Y   +DGLC R  V
Sbjct: 158 CIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLV 204


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 10/332 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L K +       L + +   G  PD++TY+ LI  FCK  +      +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
           F +++   F P+VVT++ LI GLC E R+ EA  LF ++ K+  C PN +TYN+LI+G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    A+NL + M     E G    P+ VTY+ +++G CK   +D A +L  QM  + 
Sbjct: 172 RMGKMDEAMNLLERM----AETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNVVT+TSL+ G C  N  ++A  +L EM  +   P V + N I++  C+  +++ A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +   ++ + D  PN  ++N ++ G C   + +   EL        C  D   Y  +I+  
Sbjct: 286 KF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343

Query: 308 CKNKEVEEALSLYNE-LPFKGIKPTVVTYNTL 338
           C+ K+V+EA  +Y + L   G  P  +TY+T 
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 181/331 (54%), Gaps = 8/331 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P   TY+ LI+  CK  + S  + +   ++ S   P++ T+T+LI G C   +  +A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F +L A G  P+V+TY+ LI+GLC+ G    A++LF  M      +     PNTVTY+ +
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM-----PNTVTYNSL 166

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G C+ G +D+A  L  +M     +P+VVTYT+L++GFC     ++A  LL +M  +G+
Sbjct: 167 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 226

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            PNVV+   +M+ LC+  ++ +A  +L  M +    P  +TYNT++DG+C   ++   ++
Sbjct: 227 TPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARK 286

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               +E M C  +  S+NI+I G CK     EA+ L  E   +   P VV Y T+   L 
Sbjct: 287 FM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLC 344

Query: 344 EIRQAERALKLFVEM-QGNDVAADTCTYRTF 373
             ++ + A +++ +M +      ++ TY TF
Sbjct: 345 REKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 124/225 (55%), Gaps = 1/225 (0%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P  VTY+ +I GLCK     +A +L  +M Y    P++ TYT+LI GFC +   ++A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYNTLMDGFC 273
             ++V +G +P+VV+ + +++ LCK G++  A  L   M++     PN  TYN+L+ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK++    L   M   G   D  +Y  L+NG+CK   +++A  L N++  KG+ P VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           T+ +L  GL    +   A+ +  EM+    +    TY T +DG C
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 276



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++  L+    K    D    L  ++   GL P++ T++ L++  C+  ++S   
Sbjct: 191 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAV 250

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I G + R   +P V T+ +++ G C  +++ EA      L+   C PNV+++N +I GL
Sbjct: 251 HILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGL 308

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+   +  A+ L +E             P+ V Y+ +ID LC+E  VD+A  ++ +M  E
Sbjct: 309 CKVNRSSEAMELVEEARRRR------CNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362

Query: 187 -NLNPNVVTYTSL 198
               PN +TY++ 
Sbjct: 363 PGCLPNSITYSTF 375



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 1/172 (0%)

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           W   +G    + D    P  V+ N +++ LCK  +   A  LL+ MV     P+ FTY T
Sbjct: 35  WPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 94

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ GFC + K +    +F  + + G + D  +Y+ LI+G CK   ++EA+ L+  +   G
Sbjct: 95  LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154

Query: 328 -IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              P  VTYN+L  G   + + + A+ L   M     + D  TY T ++G C
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC 206


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 8/365 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL    + ++ D V  L K + + G+ P + TY+IL++   + G +S    ++  + 
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R   A +V  ++++I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 134 VALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            A  L  +M   G G        N + ++ +IDG C+ G V+KA E+   M+   +  ++
Sbjct: 306 AAEMLLADMQLRGVGH-------NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDI 358

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY +L  G C  N   +AK LL  M ++GV PN VS   +++   K G M  A RL   
Sbjct: 359 YTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRD 418

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M     RP+  TYN ++DG+   G I   +     ME  G   D ++Y  L++G+C N +
Sbjct: 419 MEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGK 478

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+ AL L+ E+  +G KP VV Y  L  GL +  ++E A +L+ +M    +  D   Y  
Sbjct: 479 VDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSV 538

Query: 373 FIDGL 377
            +  L
Sbjct: 539 LVGSL 543



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 165/334 (49%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L++      V +++  +    +  D+Y YS +IN +C+ G V     +
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   +     PN  T+ +LI G C   +I  A  L   ++  G   N I +NT+I+G CR
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +   M     E+ +       TY+ +  GLC+   ++ AK+L   M  + +
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDI------YTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+YT+LI       D  EA+ L  +M  +G +P+VV+ NV+++   KNG +  A R
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  + P+ +TY  L+ G C+ GK++    LF  M+  G K +  +Y  L++G  
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           K    EEA  LY+++   G+ P    Y+ L   L
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 15/333 (4%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTS---LIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           GQ+     + G+ + SC  P  VT  S   ++ G C    + +A  L  +L   G   N 
Sbjct: 126 GQLPAAADLLGKAIASC--PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
             YN+L++   R  +      L KEM N   E      P   TY+I++DGL + G + K 
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRGVE------PTVGTYTILVDGLSRAGDISKV 237

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + ++ +MK +N+  +V  Y+++I+ +C   +   A  +  E V  GV+PN  +   ++N 
Sbjct: 238 EAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALING 297

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+++ A  LL  M    V  N   +NT++DG+C  G + +  E+   ME MG + D
Sbjct: 298 FCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELD 357

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN L  G C+   +E+A  L + +  KG+ P  V+Y TL     +      A +LF 
Sbjct: 358 IYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFR 417

Query: 357 EMQGNDVAADTCTYRTFIDGL----CVRPQVRF 385
           +M+G        TY   IDG      +R   RF
Sbjct: 418 DMEGKGSRPSVVTYNVMIDGYIKNGSIREAERF 450



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 12/339 (3%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           + S++++ FCK G V     +   + R     N   + SL+     +      A L  ++
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           +  G EP V TY  L++GL R G       ++ EM   N    V F      YS +I+  
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYF------YSAVINAY 263

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+ G V +A E+F +     + PN  TY +LI+GFC       A+ LL +M  +GV  N 
Sbjct: 264 CRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQ 323

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           +  N +++  C++G ++ A  +  +M +  +  + +TYNTL  G C   ++   K+L   
Sbjct: 324 IVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI 383

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE--- 344
           M   G   +  SY  LI+ + K  ++ EA  L+ ++  KG +P+VVTYN +  G  +   
Sbjct: 384 MAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGS 443

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           IR+AER  K   EM+   +  D  TY   + G CV  +V
Sbjct: 444 IREAERFKK---EMEKKGLVPDIYTYAGLVHGHCVNGKV 479



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 6/265 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++  L+    K    +    L   +   G+  +   ++ +I+ +C+ G V  
Sbjct: 282 HGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I   + +     ++ T+ +L  GLC  +R+ +A  L   +   G  PN ++Y TLI+
Sbjct: 342 ALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLIS 401

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
              + G  + A  LF++M  G G      +P+ VTY+++IDG  K G + +A+    +M+
Sbjct: 402 IHAKEGDMVEARRLFRDM-EGKGS-----RPSVVTYNVMIDGYIKNGSIREAERFKKEME 455

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P++ TY  L+HG C     + A  L  EM  +G +PNVV+   +++ L K G+ +
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLM 269
            A +L D M+   + P+   Y+ L+
Sbjct: 516 EAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 6/235 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    ++   +  L +   +  +G+  D+YTY+ L    C++ ++     +   + 
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               APN V++T+LI     E  +VEA  LF  ++  G  P+V+TYN +I+G  + G   
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A    KEM     + G+V  P+  TY+ ++ G C  G VD A  LF +MK+    PNVV
Sbjct: 446 EAERFKKEME----KKGLV--PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVV 499

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            YT+L+ G        EA  L  +M+  G+ P+    +V++  L  + + D   R
Sbjct: 500 AYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N+++    KN          K +   GL PD+YTY+ L++  C  G+V +  
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +      PNVV +T+L+ GL  E R  EA  L+  + A G  P+   Y+ L+  L
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 176/335 (52%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ +I+ FCK+ ++     +  R+    F P++VT+  +I  LC   ++  A  +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L    C P VITY  LI      G    A+ L +EM      +     P+  TY+ I
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM------LARGLLPDMYTYNAI 248

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G+CKEG V++A EL   +  +   P+V++Y  L+  F +   W+E + L+ EM  +G 
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN V+ +++++ LC+ G++D A  +L +M++ ++ P+ ++Y+ L+   C  G+++    
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +   M S GC  D  +YN ++   CKN    +AL ++N+L   G  P V +YNT+   L+
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL +   M    V  D  TY + I  LC
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC 463



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 187/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++G L   +     L +  +L      P + TY+ILI      G ++    +
Sbjct: 170 PDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 229

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P++ T+ ++I+G+C E  +  AA L T L + GC+P+VI+YN L+     
Sbjct: 230 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLN 289

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L  EM +   E      PN VTYSI+I  LC+ G +D+A  +   M  + L
Sbjct: 290 QGKWDEGEKLVAEMFSRGCE------PNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 343

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +Y  LI   C     + A G++  M+  G  P++V+ N I+  LCKNG  + A  
Sbjct: 344 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 403

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + +      PN  +YNT++      G  +R   +  +M S G   D+ +YN LI+  C
Sbjct: 404 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC 463

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  VEEA+ L +++   G +PTV++YN +  GL ++R+ + A+ +F EM       +  
Sbjct: 464 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 523

Query: 369 TYRTFIDGL 377
           TY   I+G+
Sbjct: 524 TYILLIEGI 532



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 180/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K    +    +  R+ + G  PD+ TY+I+I   C   ++ L   +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+    E  I EA  L  ++ A G  P++ TYN +I G+C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   +T+         KP+ ++Y+I++     +G  D+ ++L  +M     
Sbjct: 255 EGMVERAAELITSLTSKG------CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY+ LI   C     +EA  +L  M+++ + P+  S + +++ LCK G++D A  
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++D M+     P+   YNT++   C  G  N+  E+F  +  MGC  +  SYN +I+   
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +   AL +   +  KG+ P  +TYN+L   L      E A+ L  +M+ +       
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488

Query: 369 TYRTFIDGLC 378
           +Y   + GLC
Sbjct: 489 SYNIVLLGLC 498



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 42/327 (12%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+N  CK G+ +        ++   + P+V+  T LIKG      I +A+ +   L++  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-- 131

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
                              HT                     +P+   Y+ +I G CK  
Sbjct: 132 -------------------HT---------------------EPDVFAYNAVISGFCKVN 151

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++ A ++  +MK     P++VTY  +I   C+      A  +L +++     P V++  
Sbjct: 152 RIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYT 211

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
           +++      G ++ A +LL+ M+   + P+ +TYN ++ G C  G + R  EL  S+ S 
Sbjct: 212 ILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 271

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           GCK D  SYNIL+  +    + +E   L  E+  +G +P  VTY+ L   L    + + A
Sbjct: 272 GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +   M   ++  DT +Y   I  LC
Sbjct: 332 ISVLKVMIEKELTPDTYSYDPLISALC 358



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP VSS+N ++  L         L +   + S G+ PD  TY+ LI+C C+ G V     
Sbjct: 414 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIG 473

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +S F P V+++  ++ GLC   RI +A  +F ++   GC PN  TY  LI G+ 
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 533

Query: 128 RTGHTIVALNL 138
             G    A+ L
Sbjct: 534 FAGWRTEAMEL 544



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  CK GK + +   L+ +V     P+      L+ GF     I +   +   +ES  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + D F+YN +I+G+CK   +E A  + N +  +G  P +VTYN +   L   R+   AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           K+  ++  ++      TY   I+   V 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVE 220


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ +L  L      +    LF+ +   GL  D+YTY+I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+T+LI       ++  A  LF  + + GC PN++TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 129 TGHTIVALNLFKEMTNGNG--EIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  +F+ M       ++ + FK        PN VTY  ++DG CK   V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M  E   PN + Y +LI G C     +EA+ +  EM + G    + + + +++   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  + D AS++L  M++    PN   Y  ++DG C  GK +   +L   ME  GC+ +  
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+G+    ++E  L L   +  KG+ P  VTY  L     +    + A  L  EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +       T  YR  I+G 
Sbjct: 841 KQTHWPTHTAGYRKVIEGF 859



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 25/384 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VSSF     CL     Y+   S+ + +   G  PD  TYS ++N  C   ++ L F++F 
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R     +V T+T ++   C    I +A   F +++  GC PNV+TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM------- 183
               A  LF+ M +     G +  PN VTYS +IDG CK G V+KA ++F +M       
Sbjct: 568 KVSYANELFETMLSE----GCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 184 -------KYEN--LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
                  +Y++    PNVVTY +L+ GFC ++   EA+ LL  M  +G +PN +  + ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCK GK+D A  +   M +       +TY++L+D +    + +   ++   M    C 
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   Y  +I+G CK  + +EA  L   +  KG +P VVTY  +  G   I + E  L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M    VA +  TYR  ID  C
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCC 825



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 64/435 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P  V+   +L GCL K K       +   +   G +P    ++ L++ +C  G
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALF 104
             S  + +  ++++    P  V +  LI  +C                A S ++ A  + 
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 105 TKL----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLF 139
            K+                KAF         G  P+  TY+ ++N LC      +A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +EM  G    G+V   +  TY+I++D  CK G +++A++ F +M+     PNVVTYT+LI
Sbjct: 507 EEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DV 258
           H +  A   + A  L   M+ +G  PN+V+ + +++  CK G+++ A ++ + M    DV
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 259 ---------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                          RPN  TY  L+DGFC + ++   ++L  +M   GC+ +   Y+ L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK  +++EA  +  E+   G   T+ TY++L    F++++ + A K+  +M  N  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 364 AADTCTYRTFIDGLC 378
           A +   Y   IDGLC
Sbjct: 741 APNVVIYTEMIDGLC 755



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 184/407 (45%), Gaps = 31/407 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + S G  P++ TYS LI+  CK GQV     I
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 69  FGRILRS----------------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           F R+  S                   PNVVT+ +L+ G C   R+ EA  L   +   GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           EPN I Y+ LI+GLC+ G    A  +  EM+         F     TYS +ID   K   
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG------FPATLYTYSSLIDRYFKVKR 724

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D A ++  +M   +  PNVV YT +I G C     +EA  L+  M ++G QPNVV+   
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++     GK++    LL+ M    V PN  TY  L+D  C  G ++    L   M+   
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
                  Y  +I G+  NKE  E+L L +E+      P +  Y  L   L + ++ E AL
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 353 KLFVEMQ--GNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
           +L  E+      +   + TY + I+ LC+  +V      F+   +KG
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 178/416 (42%), Gaps = 50/416 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+    K    D+   + + ++   L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              +    F P+ V +T LI GLC  S   EA     +++A  C PNV+TY         
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C +G    A  L K+M      +    
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM------VKCGH 403

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            P  V Y+I+I  +C +        +D A++ + +M    +  N +  +S     C A  
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ QG  P+  + + ++N LC   KM+ A  L + M +  +  + +TY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++D FC  G I + ++ F  M  +GC  +  +Y  LI+ Y K K+V  A  L+  +  +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P +VTY+ L  G  +  Q E+A ++F  M G+    D   Y    D    RP V
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 10/320 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P    ++ L+  L K    D    +   ++  G    LYTYS LI+ + K+ +  
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L   +  ++L +  APNVV +T +I GLC   +  EA  L   ++  GC+PNV+TY  +I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G    G     L L + M    G  GV   PN VTY ++ID  CK G +D A  L  +M
Sbjct: 787 DGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K  +   +   Y  +I GF    ++ E+ GLL E+      P +    ++++ L K  ++
Sbjct: 841 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898

Query: 244 DNASRLLDLMV--QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + A RLL+ +      +   + TYN+L++  CL  K+    +LF  M   G   +  S+ 
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958

Query: 302 ILINGYCKNKEVEEALSLYN 321
            LI G  +N ++ EAL L +
Sbjct: 959 SLIKGLFRNSKISEALLLLD 978



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L+   C+ G  S+     GR+    F P+  T+  LI+      R+  A+ +  ++   
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
               +  T       LC+ G    AL L  E  N        F P+TV Y+ +I GLC+ 
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETEN--------FVPDTVFYTKLISGLCEA 315

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              ++A +   +M+  +  PNVVTY++L+ G  +       K +L  M+ +G  P+    
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK------INRVKEL 284
           N +++  C +G    A +LL  MV+C   P    YN L+   C          ++  ++ 
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M + G   +  + +      C   + E+A S+  E+  +G  P   TY+ + + L  
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + E A  LF EM+   + AD  TY   +D  C
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 41/290 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  + +++ L+    K K  D    +  ++      P++  Y+ +I+  CK+G+   
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-----GFVD----- 174
             C+ G   VA NL +EM   +      +  +T  Y  +I+G  KE     G +D     
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 175 -----------------KAKELFLQMKY--------ENLNPNVVTYTSLIHGFCHANDWN 209
                            KA+ L + ++           L     TY SLI   C AN   
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            A  L  EM  +GV P + S   ++  L +N K+  A  LLD +   +++
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 3/235 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K     Y+ ++D + ++      +E   Q++ ++          L+   C    ++ A 
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  + D   +P+  + N ++    K  ++D+AS +   M   ++R + FT        
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ + +E    +E+     D   Y  LI+G C+    EEA+   N +      P V
Sbjct: 281 C---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           VTY+TL  G    +Q  R  ++   M           + + +   C      + Y
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 178/342 (52%), Gaps = 5/342 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D  T++++I+ F   G  +     F R++     PN++ FT +I+GLC    I +A
Sbjct: 235 GFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQA 294

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +  ++   G +PNV T+ +LI+GLC+ G T  A  LF ++           KPN +TY
Sbjct: 295 FEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENH-----KPNVLTY 349

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I G C+E  +++A+ L  +MK + L PN  TYT+LI G C A ++  A  L+  M  
Sbjct: 350 TAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSS 409

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  PN+ + N I+N LCK G++  A ++L+   Q  ++P+ FTYN LM   C    I +
Sbjct: 410 EGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQ 469

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              LF  M  +G + D  SY  LI  +C+   ++E+   + E    GI PT  TY ++  
Sbjct: 470 ALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMIC 529

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           G         A+K F  +  +  A D+ TY   I GLC + +
Sbjct: 530 GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSK 571



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 183/347 (52%), Gaps = 7/347 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF+ +   G+ PD  +Y +++  +CK+G +         +L   F  +  TFT +I    
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            +     A   F +L   G EPN+I +  +I GLC+ G    A  + +EM      +G  
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM------VGKG 305

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEA 211
           +KPN  T++ +IDGLCK+G+ +KA  LFL++ + EN  PNV+TYT++I G+C  +  N A
Sbjct: 306 WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           + LL  M +QG+ PN  +   +++  CK G  + A  L++LM      PN  TYN +++G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G++    ++       G K D F+YNIL++ +CK + + +AL+L+N++   GI+P 
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + +Y TL        + + +   F E     +     TY + I G C
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYC 532



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 7/331 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  ++  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 273 PNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRL 332

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS    PNV+T+T++I G C E ++  A  L +++K  G  PN  TY TLI+G C
Sbjct: 333 FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHC 392

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A +L   M++        F PN  TY+ I++GLCK G V +A ++        
Sbjct: 393 KAGNFERAYDLMNLMSSEG------FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNG 446

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+  TY  L+   C   +  +A  L  +M+  G+QP++ S   ++   C+  +M  + 
Sbjct: 447 LKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESE 506

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
              +  V+  + P   TY +++ G+C  G +    + F  +   GC  D  +Y  +I+G 
Sbjct: 507 MFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGL 566

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           CK  + +EA SLY+ +  KG+ P  VT  TL
Sbjct: 567 CKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 177/348 (50%), Gaps = 7/348 (2%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++F +++   +   +    L  F+RL  +GL P+L  ++ +I   CK G +   F +   
Sbjct: 241 ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEE 300

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTG 130
           ++   + PNV T TSLI GLC +    +A  LF KL ++   +PNV+TY  +I+G CR  
Sbjct: 301 MVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED 360

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L   M     E G+V  PNT TY+ +IDG CK G  ++A +L   M  E  +P
Sbjct: 361 KLNRAEMLLSRMK----EQGLV--PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSP 414

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+ TY ++++G C      EA  +L +    G++P+  + N++M+E CK   +  A  L 
Sbjct: 415 NLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALF 474

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M++  ++P+  +Y TL+  FC   ++   +  F     +G    + +Y  +I GYC+ 
Sbjct: 475 NKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCRE 534

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
             +  A+  ++ L   G  P  +TY  +  GL +  + + A  L+  M
Sbjct: 535 GNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 162/339 (47%), Gaps = 9/339 (2%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE-AAALFTKLKAF 110
           ++  F ++G++     +   +      PN  T   +IK + +E  +VE A  LF ++   
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK-VTSEMGLVEYAELLFEEMCVR 199

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G +P+ I+Y  ++   C+ G+ + A      M          F  +  T+++II     +
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERG------FVVDNATFTLIISRFSGK 253

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G+  +A   F ++    L PN++ +T +I G C      +A  +L EMV +G +PNV + 
Sbjct: 254 GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313

Query: 231 NVIMNELCKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
             +++ LCK G  + A RL L L+   + +PN  TY  ++ G+C   K+NR + L   M+
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   +  +Y  LI+G+CK    E A  L N +  +G  P + TYN + +GL +  + +
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            A K+  +   N +  D  TY   +   C +  +R   A
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALA 472


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 184/366 (50%), Gaps = 8/366 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ IL+    K    D  + L K +   GL  DL  Y+ LI  FC  G++  G  +F  +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    +P  +T+ +LI+G C   R+ EA+ +F  +   G  PNV TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L   M   + E      PN VTY+III+ LCK+  V  A E+   MK     P+ 
Sbjct: 334 KEALQLLNLMLQKDEE------PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +TY SL+ G C   D +EA  LL  M+       P+V+S N +++ LCK  ++  A  + 
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           DL+V+     +  T N L++    +G +N+  EL+  + +     +  +Y  +I+G+CK 
Sbjct: 448 DLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +  A  L  ++    + P+V  YN L   L +    ++A +LF EMQ +D   D  ++
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 371 RTFIDG 376
              IDG
Sbjct: 568 NIMIDG 573



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 193/371 (52%), Gaps = 10/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++NILL  L +N  +   +SL + +    L PD+ +Y+ +I  FC+  ++     +  
Sbjct: 142 VYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S  + ++VT+  LI   C   ++ EA  L  ++K  G E ++I Y +LI G C  G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 131 HTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                  LF E +  G+        P  +TY+ +I G CK G + +A E+F  M    + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV TYT LI G C      EA  LL  M+ +  +PNVV+ N+I+N+LCK+  + +A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILINGY 307
           ++LM +   RP+  TYN+L+ G C  G ++   +L   M  +S     D  S+N LI+G 
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   + +AL +Y+ L  K     +VT N L +   +     +A++L+ ++  + +  ++
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 368 CTYRTFIDGLC 378
            TY T IDG C
Sbjct: 495 DTYTTMIDGFC 505



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 188/366 (51%), Gaps = 8/366 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N L+  L ++++++   S ++++     F +  + S L+ CF +M +      +   +L+
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
             FA NV  +  L+KGLC      +A +L  +++     P+V++YNT+I G C       
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL L  EM  G+G        + VT+ I+ID  CK G +D+A  L  +MK++ L  +++ 
Sbjct: 196 ALQLANEM-QGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           YTSLI GFC   + +  K L  E++++G  P  ++ N ++   CK G++  AS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  VRPN +TY  L+DG C  GK     +L   M     + +  +YNI+IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRT 372
           +AL +   +  +  +P  +TYN+L  GL      + A KL   M  +      D  ++  
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 373 FIDGLC 378
            I GLC
Sbjct: 430 LIHGLC 435



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 178/339 (52%), Gaps = 12/339 (3%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P++ TY+I+IN  CK   V+    I   + +    P+ +T+ SL+ GLCA+  + EA+ L
Sbjct: 350 PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKL 409

Query: 104 -FTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVFKPNTVT 159
            +  LK     +P+VI++N LI+GLC+      AL+++  +    G G+I        VT
Sbjct: 410 LYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDI--------VT 461

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            +I+++   K G V+KA EL+ Q+    + PN  TYT++I GFC     N AKGLL +M 
Sbjct: 462 TNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMR 521

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
              + P+V   N +++ LCK G +D A RL + M + D  P+  ++N ++DG    G I 
Sbjct: 522 LSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIK 581

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             + L V M   G   D F+Y+ LIN + K   ++EA+S ++++   G +P     +++ 
Sbjct: 582 SAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL 641

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                  + ++  +   ++   DV  D     T +D +C
Sbjct: 642 KYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 7/237 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NILL    K+   +  + L+K++++  + P+  TY+ +I+ FCK G +++   +  ++  
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S   P+V  +  L+  LC +  + +A  LF +++     P+VI++N +I+G  + G    
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A +L   M++          P+  TYS +I+   K G++D+A   F +M      P+   
Sbjct: 583 AESLLVGMSHAG------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHI 636

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC-KNGKMDNASRLL 250
             S++       + ++    + ++VD+ V  +   +  +M+ +C  +G MD A RLL
Sbjct: 637 CDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 1/162 (0%)

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           + VD G   +   +N +M  L ++   + A      M++ D   N  + + L++ F    
Sbjct: 63  QAVDSGGSLSFAGNN-LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMR 121

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K      +   M   G   + ++YNIL+ G C+N E  +A+SL  E+    + P VV+YN
Sbjct: 122 KTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYN 181

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           T+  G  E ++ E+AL+L  EMQG+  +    T+   ID  C
Sbjct: 182 TVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFC 223



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 6/170 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++    K    +    L  ++    L P ++ Y+ L++  CK G +   + +
Sbjct: 492 PNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRL 551

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R    P+V++F  +I G      I  A +L   +   G  P++ TY+ LIN   +
Sbjct: 552 FEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLK 611

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
            G+   A++ F +M +        F+P+      ++     +G  DK  E
Sbjct: 612 LGYLDEAISFFDKMIDSG------FEPDAHICDSVLKYCISQGETDKLTE 655



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 7/174 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  +N LL  L K    D    LF+ +     FPD+ +++I+I+   K G +     
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAES 585

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +  +  +P++ T++ LI        + EA + F K+   G EP+    ++++    
Sbjct: 586 LLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCI 645

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC-KEGFVDKAKELF 180
             G T       K++ + +    V+ K  T T   ++D +C   G +D AK L 
Sbjct: 646 SQGETDKLTEFVKKLVDKD---VVLDKELTCT---VMDYMCSSSGNMDIAKRLL 693


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N L+  L +    D    + + +   G+ P++ TY+  I   C+   V   F ++ 
Sbjct: 236 VVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYE 295

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R    P+VVT ++L+ GLC   R  EA ALF +++  G  PN +TY TLI+ L +  
Sbjct: 296 EMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKAR 355

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               +  L  E+ +     GVV   + V Y+ ++D L K+G +D+ K++F     +N  P
Sbjct: 356 RGSESHGLLGEVVSR----GVVM--DLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTP 409

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTYT LI   C A + + A+ +L+EM D+ V PNVV+ + I+N L K G +  A+  +
Sbjct: 410 NGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYM 469

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  + PN  TY T+MDGF    +     +L+  M   G + + F  ++L+NG  KN
Sbjct: 470 RKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKN 529

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++EEA +L+ ++  +G+    V Y TL  GLF++     A K+  E+   +++ D   Y
Sbjct: 530 GKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVY 589

Query: 371 RTFIDGLCV 379
             F++ LC+
Sbjct: 590 NVFVNCLCM 598



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 6/333 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+  ++ L++ +CK G +        R+       +VV + +L+ GLC       A  + 
Sbjct: 200 DVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGML 259

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             +K  G EPNV+TY T I   CRT     A +L++EM      +GV+  P+ VT S ++
Sbjct: 260 ETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVR----MGVL--PDVVTLSALV 313

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DGLC+ G   +A  LF +M+     PN VTY +LI     A   +E+ GLL E+V +GV 
Sbjct: 314 DGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVV 373

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
            ++V    +M+ L K GK+D    +    +  +  PN  TY  L+D  C  G ++  +++
Sbjct: 374 MDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQM 433

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            + ME      +  +++ +ING  K   + +A     ++  +GI P VVTY T+  G F+
Sbjct: 434 LLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFK 493

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            ++ E AL L+ EM    V  +       ++GL
Sbjct: 494 CQEQESALDLYHEMLCEGVEVNKFIVDLLVNGL 526



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 151/308 (49%), Gaps = 5/308 (1%)

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVE-AAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +LR+  + + V++  +I GL  + R    A AL  ++   G   + +T NT +  LCR G
Sbjct: 119 LLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDG 178

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L + M  G      + + + V ++ ++DG CK G ++ A     +M+ + +  
Sbjct: 179 QVEGAAALAEMMVRGRE----IHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGV 234

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VV Y +L+ G C A + + A+G+L  M   GV+PNVV+    + E C+   +D+A  L 
Sbjct: 235 DVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLY 294

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + MV+  V P+  T + L+DG C  G+ +    LF  ME +G   +  +Y  LI+   K 
Sbjct: 295 EEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKA 354

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           +   E+  L  E+  +G+   +V Y +L   L +  + +    +F     ++   +  TY
Sbjct: 355 RRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTY 414

Query: 371 RTFIDGLC 378
              ID LC
Sbjct: 415 TVLIDALC 422



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 152/312 (48%), Gaps = 9/312 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + L+  L +   +    +LF+ +  IG  P+  TY  LI+   K  + S    +
Sbjct: 304 PDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGL 363

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++      ++V +TSL+  L  + +I E   +F    +    PN +TY  LI+ LCR
Sbjct: 364 LGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCR 423

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  +  EM + +        PN VT+S II+GL K+G + KA +   +MK   +
Sbjct: 424 AGNVDGAEQMLLEMEDKS------VHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGI 477

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNVVTY +++ GF    +   A  L  EM+ +GV+ N    ++++N L KNGKM+ A  
Sbjct: 478 DPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEA 537

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  +  +   Y TL+DG    G +    ++   +       D   YN+ +N  C
Sbjct: 538 LFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLC 597

Query: 309 ---KNKEVEEAL 317
              K+KE E  L
Sbjct: 598 MLGKSKEAESIL 609



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 191 NVVTYTSLIHGFC-HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           + V+Y  +I G          A  LL EM  +GV  + V+ N  +  LC++G+++ A+ L
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL 186

Query: 250 LDLMVQCDV--RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++MV+     R +   +N L+DG+C +G +         M + G   D   YN L+ G 
Sbjct: 187 AEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGL 246

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  E + A  +   +   G++P VVTY T           + A  L+ EM    V  D 
Sbjct: 247 CRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDV 306

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            T    +DGLC   +    YA
Sbjct: 307 VTLSALVDGLCRAGRFSEAYA 327


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LSL + +   G  P + TY+  I   CK+G++S        +L +   P+VV++ +LI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C    +++A  LF +L++    P ++TYNTL++GLCR G   VA  L  EM N     
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG--- 439

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                P+ VTY+I+++G CK G +  A+E F +M +E L  +   Y + I G     D +
Sbjct: 440 ---IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  L  EM+ +G  P+++  NV+++ LCK G ++ AS LL  MV   V P+  TY +++
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
                 G++ + +E+F  M S G      +Y +LI+G+     +E A   ++E+  KGI 
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+TYN+L +GL ++R+ ++A   F EM    +  +  +Y   I+  C
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 179/365 (49%), Gaps = 29/365 (7%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V+++N  +  L K       +     + +  L PD+ +Y+ LI  +C++G +   F
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++F  +      P +VT+ +L+ GLC +  +  A  L  ++   G  P+++TY  L+NG 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNT 157
           C+ G   +A   F EM +   E+                                F P+ 
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           + Y++++DGLCK G +++A EL  +M  + + P+ VTYTS+IH         + + +  E
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+ +G+ P+VV+  V+++     G+++ A      M +  + PN  TYN+L++G C   +
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +++    F  M   G   + +SY ILIN  C     +EALSLY ++  +G++P   T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 338 LFHGL 342
           L   L
Sbjct: 695 LLKQL 699



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 190/440 (43%), Gaps = 76/440 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L         + +++ +   G+ P + TY+ L++ +CK G+V  G  +
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF-------TKLKAF----------- 110
              + R   APN VT+  LI GL  +    +A  L         K+ A+           
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 111 -----------------GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                            G  P V TYN+ I GLC+ G    A+    +M   N       
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------L 370

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V+Y+ +I G C+ G + KA  LF +++   L P +VTY +L+ G C   +   A+ 
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR-------------- 259
           L +EM+++G+ P++V+  +++N  CK G +  A    D M+   +               
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 260 ---------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
                                P+   YN ++DG C  G +    EL   M S G   D  
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+ + +N  + +   ++ E+  KG+ P+VVTY  L HG     + ERA   F EM
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 359 QGNDVAADTCTYRTFIDGLC 378
           Q   +  +  TY + I+GLC
Sbjct: 611 QEKGILPNVITYNSLINGLC 630



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 6/326 (1%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +LI  + K   V     +F ++++S  +P+V     +++ L  +  + +A  ++  +  F
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G +P ++TYNTL++  C+ G     L+L  EM            PN VTY+++I+GL K+
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSKK 282

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G  ++AK L  +M    L  +  TY  LI+G+ +     EA  L  EMV +G  P V + 
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N  +  LCK G+M +A + L  M+  ++ P+  +YNTL+ G+C  G + +   LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +       +YN L++G C+  E+E A  L  E+  +GI P +VTY  L +G  ++     
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDG 376
           A + F EM    +  D+  Y T I G
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVG 488



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 173/372 (46%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S   V   ++L+   +K    +  LS+F ++    L PD+   + ++        +S   
Sbjct: 160 SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 219

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            ++  +      P +VT+ +L+   C   ++ +   L ++++  GC PN +TYN LINGL
Sbjct: 220 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A  L  EM      +    K +  TY+ +I G   +G + +A  L  +M  +
Sbjct: 280 SKKGEFEQAKGLIGEM------LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P V TY S I+G C     ++A   L +M+   + P+VVS N ++   C+ G +  A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L D +    + P   TYNTL+DG C  G++   ++L V M + G   D  +Y IL+NG
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +  A   ++E+  +G++     Y T   G  ++    RA  L  EM       D
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 367 TCTYRTFIDGLC 378
              Y   +DGLC
Sbjct: 514 LIIYNVVVDGLC 525



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 152/302 (50%), Gaps = 6/302 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL  L +    +    L   + + G+ PD+ TY+IL+N  CKMG +S+    
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L      +   + + I G         A +L  ++ A G  P++I YN +++GLC+
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L ++M +     GV+  P+ VTY+ II    + G + K +E+F +M  + L
Sbjct: 527 LGNLEEASELLQKMVSD----GVI--PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTYT LIHG         A     EM ++G+ PNV++ N ++N LCK  +MD A  
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               MV+  + PN ++Y  L++  C  G       L+  M   G + D  +++ L+    
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700

Query: 309 KN 310
           K+
Sbjct: 701 KD 702


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ +L  L      +    LF+ +   GL  D+YTY+I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+T+LI       ++  A  LF  + + GC PN++TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 129 TGHTIVALNLFKEMTNGNG--EIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  +F+ M       ++ + FK        PN VTY  ++DG CK   V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M  E   PN + Y +LI G C     +EA+ +  EM + G    + + + +++   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  + D AS++L  M++    PN   Y  ++DG C  GK +   +L   ME  GC+ +  
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+G+    ++E  L L   +  KG+ P  VTY  L     +    + A  L  EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +       T  YR  I+G 
Sbjct: 841 KQTHWPTHTAGYRKVIEGF 859



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 25/384 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VSSF     CL     Y+   S+ + +   G  PD  TYS ++N  C   ++ L F++F 
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R     +V T+T ++   C    I +A   F +++  GC PNV+TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM------- 183
               A  LF+ M +     G +  PN VTYS +IDG CK G V+KA ++F +M       
Sbjct: 568 KVSYANELFETMLSE----GCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 184 -------KYEN--LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
                  +Y++    PNVVTY +L+ GFC ++   EA+ LL  M  +G +PN +  + ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCK GK+D A  +   M +       +TY++L+D +    + +   ++   M    C 
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   Y  +I+G CK  + +EA  L   +  KG +P VVTY  +  G   I + E  L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M    VA +  TYR  ID  C
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCC 825



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 64/435 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P  V+   +L GCL K K       +   +   G +P    ++ L++ +C  G
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALF 104
             S  + +  ++++    P  V +  LI  +C                A S ++ A  + 
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 105 TKL----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLF 139
            K+                KAF         G  P+  TY+ ++N LC      +A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +EM  G    G+V   +  TY+I++D  CK G +++A++ F +M+     PNVVTYT+LI
Sbjct: 507 EEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DV 258
           H +  A   + A  L   M+ +G  PN+V+ + +++  CK G+++ A ++ + M    DV
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 259 ---------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                          RPN  TY  L+DGFC + ++   ++L  +M   GC+ +   Y+ L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK  +++EA  +  E+   G   T+ TY++L    F++++ + A K+  +M  N  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 364 AADTCTYRTFIDGLC 378
           A +   Y   IDGLC
Sbjct: 741 APNVVIYTEMIDGLC 755



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 184/407 (45%), Gaps = 31/407 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + S G  P++ TYS LI+  CK GQV     I
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 69  FGRILRS----------------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           F R+  S                   PNVVT+ +L+ G C   R+ EA  L   +   GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           EPN I Y+ LI+GLC+ G    A  +  EM+         F     TYS +ID   K   
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG------FPATLYTYSSLIDRYFKVKR 724

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D A ++  +M   +  PNVV YT +I G C     +EA  L+  M ++G QPNVV+   
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++     GK++    LL+ M    V PN  TY  L+D  C  G ++    L   M+   
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
                  Y  +I G+  NKE  E+L L +E+      P +  Y  L   L + ++ E AL
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 353 KLFVEMQ--GNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
           +L  E+      +   + TY + I+ LC+  +V      F+   +KG
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+    K    D+   + + ++   L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              +    F P+ V +T LI GLC  S   EA     +++A  C PNV+TY         
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C +G    A  L K+M           
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG------H 403

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            P  V Y+I+I  +C +        +D A++ + +M    +  N +  +S     C A  
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ QG  P+  + + ++N LC   KM+ A  L + M +  +  + +TY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++D FC  G I + ++ F  M  +GC  +  +Y  LI+ Y K K+V  A  L+  +  +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P +VTY+ L  G  +  Q E+A ++F  M G+    D   Y    D    RP V
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 10/320 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P    ++ L+  L K    D    +   ++  G    LYTYS LI+ + K+ +  
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L   +  ++L +  APNVV +T +I GLC   +  EA  L   ++  GC+PNV+TY  +I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G    G     L L + M    G  GV   PN VTY ++ID  CK G +D A  L  +M
Sbjct: 787 DGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K  +   +   Y  +I GF    ++ E+ GLL E+      P +    ++++ L K  ++
Sbjct: 841 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898

Query: 244 DNASRLLDLMV--QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + A RLL+ +      +   + TYN+L++  CL  K+    +LF  M   G   +  S+ 
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958

Query: 302 ILINGYCKNKEVEEALSLYN 321
            LI G  +N ++ EAL L +
Sbjct: 959 SLIKGLFRNSKISEALLLLD 978



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L+   C+ G  S+     GR+    F P+  T+  LI+      R+  A+ +  ++   
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
               +  T       LC+ G    AL L  E  N        F P+TV Y+ +I GLC+ 
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETEN--------FVPDTVFYTKLISGLCEA 315

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              ++A +   +M+  +  PNVVTY++L+ G  +       K +L  M+ +G  P+    
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK------INRVKEL 284
           N +++  C +G    A +LL  MV+C   P    YN L+   C          ++  ++ 
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M + G   +  + +      C   + E+A S+  E+  +G  P   TY+ + + L  
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + E A  LF EM+   + AD  TY   +D  C
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 41/284 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  + +++ L+    K K  D    +  ++      P++  Y+ +I+  CK+G+   
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-----GFVD----- 174
             C+ G   VA NL +EM   +      +  +T  Y  +I+G  KE     G +D     
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 175 -----------------KAKELFLQMKY--------ENLNPNVVTYTSLIHGFCHANDWN 209
                            KA+ L + ++           L     TY SLI   C AN   
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            A  L  EM  +GV P + S   ++  L +N K+  A  LLD +
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 3/235 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K     Y+ ++D + ++      +E   Q++ ++          L+   C    ++ A 
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  + D   +P+  + N ++    K  ++D+AS +   M   ++R + FT        
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ + +E    +E+     D   Y  LI+G C+    EEA+   N +      P V
Sbjct: 281 C---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           VTY+TL  G    +Q  R  ++   M           + + +   C      + Y
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 199/410 (48%), Gaps = 34/410 (8%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    +  L+  L+K    D  L L + +  +G  PD+ T++ +I  FC++ +V  
Sbjct: 239 HGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLE 298

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G  +  R++   F PN +T+  L+ GLC   RI EA AL +K+      PNV+ +NTL+N
Sbjct: 299 GAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVN 354

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVF------------------------------K 154
           G  R G    A     +    NG +  VF                              K
Sbjct: 355 GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN  TY+I+IDG CK+G +++A  +  +M  +  + N V Y +LI   C     +EA  +
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDM 474

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             EM  +G +P++ + N ++  LC+  +M++A  L   MV   V  N+ T+NTL+  F  
Sbjct: 475 FGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 534

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+I    +L   M   GC  D+ +YN LI   CK   VE+ L L+ E+  KG+ P+++T
Sbjct: 535 RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT 594

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            N L +G     +   AL+   +M     + D  TY + I+GLC R +++
Sbjct: 595 CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 195/385 (50%), Gaps = 11/385 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+ ++   P   S+N++L  L          ++F  + S G+ P+ YT+ +++   C + 
Sbjct: 165 MKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVN 224

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V    ++   + +    PN + + +LI  L    R+ EA  L  ++   GC P+V T+N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T+I G CR    +    L   M      I   F PN +TY  ++ GLCK   +D+A+ L 
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRM------ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCK 239
            ++      PNVV + +L++GF      NEA   + + M++ G  P+V + + ++N LCK
Sbjct: 339 SKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G   +A  L++ M     +PN  TY  L+DGFC  G++     +   M + G   +   
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI+  CK+ ++ EAL ++ E+  KG KP + T+N+L  GL  + + E AL L+ +M 
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
              V A++ T+ T I     R +++
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQ 539



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 175/332 (52%), Gaps = 6/332 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+  L K   + + L L   +++ G  P+L TY+ILI+ FCK GQ+    +I
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L   F+ N V + +LI  LC   +I EA  +F ++ + GC+P++ T+N+LI GLCR
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   N+VT++ +I    + G + +A +L   M +   
Sbjct: 500 VDEMEDALALYRDMVLE----GVI--ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC 553

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C      +  GL  EM+ +G+ P++++ N+++N  C  GK+ NA  
Sbjct: 554 PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALE 613

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M+     P+  TYN+L++G C  G+I     LF  +++ G + D  +YN LI   C
Sbjct: 614 FMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           +    ++A  L       G  P  VT+N L +
Sbjct: 674 REGAFDDACFLLYRGVENGFVPNDVTWNILVY 705



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 7/231 (3%)

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YENLNPNVVTYTSLIHGFCHAN 206
           E G+VF+ +   + +I+    + G   +A  L L MK      P+  +Y  ++      N
Sbjct: 132 EEGIVFRESL--FILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGN 189

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             + A  +  +M+ +GV PN  +  ++M  LC   ++DNA  LL  M +    PN+  Y 
Sbjct: 190 CPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQ 249

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+D      +++   +L   M  MGC  D  ++N +I G+C+   V E   L + +  K
Sbjct: 250 TLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILK 309

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           G  P  +TY  L HGL +  + + A  L  ++ G +V      + T ++G 
Sbjct: 310 GFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVH----FNTLVNGF 356


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ +L  L      +    LF+ +   GL  D+YTY+I+++ FCK G +      
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+T+LI       ++  A  LF  + + GC PN++TY+ LI+G C+
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559

Query: 129 TGHTIVALNLFKEMTNGNG--EIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
            G    A  +F+ M       ++ + FK        PN VTY  ++DG CK   V++A++
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 619

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M  E   PN + Y +LI G C     +EA+ +  EM + G    + + + +++   
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 679

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  + D AS++L  M++    PN   Y  ++DG C  GK +   +L   ME  GC+ +  
Sbjct: 680 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 739

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+G+    ++E  L L   +  KG+ P  VTY  L     +    + A  L  EM
Sbjct: 740 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +       T  YR  I+G 
Sbjct: 800 KQTHWPTHTAGYRKVIEGF 818



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 25/384 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VSSF     CL     Y+   S+ + +   G  PD  TYS ++N  C   ++ L F++F 
Sbjct: 410 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R     +V T+T ++   C    I +A   F +++  GC PNV+TY  LI+   +  
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 526

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM------- 183
               A  LF+ M +     G +  PN VTYS +IDG CK G V+KA ++F +M       
Sbjct: 527 KVSYANELFETMLSE----GCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 580

Query: 184 -------KYEN--LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
                  +Y++    PNVVTY +L+ GFC ++   EA+ LL  M  +G +PN +  + ++
Sbjct: 581 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 640

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCK GK+D A  +   M +       +TY++L+D +    + +   ++   M    C 
Sbjct: 641 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 700

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   Y  +I+G CK  + +EA  L   +  KG +P VVTY  +  G   I + E  L+L
Sbjct: 701 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 760

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
              M    VA +  TYR  ID  C
Sbjct: 761 LERMGSKGVAPNYVTYRVLIDHCC 784



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 64/435 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P  V+   +L GCL K K       +   +   G +P    ++ L++ +C  G
Sbjct: 287 MRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALF 104
             S  + +  ++++    P  V +  LI  +C                A S ++ A  + 
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405

Query: 105 TKL----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLF 139
            K+                KAF         G  P+  TY+ ++N LC      +A  LF
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 465

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +EM  G    G+V   +  TY+I++D  CK G +++A++ F +M+     PNVVTYT+LI
Sbjct: 466 EEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DV 258
           H +  A   + A  L   M+ +G  PN+V+ + +++  CK G+++ A ++ + M    DV
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 259 ---------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                          RPN  TY  L+DGFC + ++   ++L  +M   GC+ +   Y+ L
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 639

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G CK  +++EA  +  E+   G   T+ TY++L    F++++ + A K+  +M  N  
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 699

Query: 364 AADTCTYRTFIDGLC 378
           A +   Y   IDGLC
Sbjct: 700 APNVVIYTEMIDGLC 714



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 184/407 (45%), Gaps = 31/407 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + S G  P++ TYS LI+  CK GQV     I
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 569

Query: 69  FGRILRS----------------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           F R+  S                   PNVVT+ +L+ G C   R+ EA  L   +   GC
Sbjct: 570 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           EPN I Y+ LI+GLC+ G    A  +  EM+         F     TYS +ID   K   
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG------FPATLYTYSSLIDRYFKVKR 683

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D A ++  +M   +  PNVV YT +I G C     +EA  L+  M ++G QPNVV+   
Sbjct: 684 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 743

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++     GK++    LL+ M    V PN  TY  L+D  C  G ++    L   M+   
Sbjct: 744 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 803

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
                  Y  +I G+  NKE  E+L L +E+      P +  Y  L   L + ++ E AL
Sbjct: 804 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 861

Query: 353 KLFVEMQ--GNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
           +L  E+      +   + TY + I+ LC+  +V      F+   +KG
Sbjct: 862 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 908



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+    K    D+   + + ++   L  D +T        CK+G+      +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
              +    F P+ V +T LI GLC  S   EA     +++A  C PNV+TY         
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C +G    A  L K+M           
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG------H 362

Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            P  V Y+I+I  +C +        +D A++ + +M    +  N +  +S     C A  
Sbjct: 363 MPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 422

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ QG  P+  + + ++N LC   KM+ A  L + M +  +  + +TY  
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++D FC  G I + ++ F  M  +GC  +  +Y  LI+ Y K K+V  A  L+  +  +G
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P +VTY+ L  G  +  Q E+A ++F  M G+    D   Y    D    RP V
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 598



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 10/320 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P    ++ L+  L K    D    +   ++  G    LYTYS LI+ + K+ +  
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           L   +  ++L +  APNVV +T +I GLC   +  EA  L   ++  GC+PNV+TY  +I
Sbjct: 686 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G    G     L L + M    G  GV   PN VTY ++ID  CK G +D A  L  +M
Sbjct: 746 DGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLEEM 799

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K  +   +   Y  +I GF    ++ E+ GLL E+      P +    ++++ L K  ++
Sbjct: 800 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 857

Query: 244 DNASRLLDLMV--QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + A RLL+ +      +   + TYN+L++  CL  K+    +LF  M   G   +  S+ 
Sbjct: 858 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 917

Query: 302 ILINGYCKNKEVEEALSLYN 321
            LI G  +N ++ EAL L +
Sbjct: 918 SLIKGLFRNSKISEALLLLD 937



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L+   C+ G  S+     GR+    F P+  T+  LI+      R+  A+ +  ++   
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
               +  T       LC+ G    AL L  E  N        F P+TV Y+ +I GLC+ 
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETEN--------FVPDTVFYTKLISGLCEA 274

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              ++A +   +M+  +  PNVVTY++L+ G  +       K +L  M+ +G  P+    
Sbjct: 275 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 334

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK------INRVKEL 284
           N +++  C +G    A +LL  MV+C   P    YN L+   C          ++  ++ 
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKA 394

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M + G   +  + +      C   + E+A S+  E+  +G  P   TY+ + + L  
Sbjct: 395 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 454

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + E A  LF EM+   + AD  TY   +D  C
Sbjct: 455 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 488



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 41/284 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  + +++ L+    K K  D    +  ++      P++  Y+ +I+  CK+G+   
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-----GFVD----- 174
             C+ G   VA NL +EM   +      +  +T  Y  +I+G  KE     G +D     
Sbjct: 782 HCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 835

Query: 175 -----------------KAKELFLQMKY--------ENLNPNVVTYTSLIHGFCHANDWN 209
                            KA+ L + ++           L     TY SLI   C AN   
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 895

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            A  L  EM  +GV P + S   ++  L +N K+  A  LLD +
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 3/235 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K     Y+ ++D + ++      +E   Q++ ++          L+   C    ++ A 
Sbjct: 120 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIAL 179

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  + D   +P+  + N ++    K  ++D+AS +   M   ++R + FT        
Sbjct: 180 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 239

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ + +E    +E+     D   Y  LI+G C+    EEA+   N +      P V
Sbjct: 240 C---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 296

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           VTY+TL  G    +Q  R  ++   M           + + +   C      + Y
Sbjct: 297 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 351


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 10/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN+++  + K    D  + +F+ +      PD+YTY  L++  CK  ++     +
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + +  CF P+ VTF  LI GLC +  +  AA L   +   GC PN +TYNTLI+GLC
Sbjct: 257 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++L   M +          PN VTY  II+GL K+G       +   M+   
Sbjct: 316 LKGKLEKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N   Y++LI G        EA  L  EM  +G + N +  + +++ LC++GK D+A 
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M      PNA+T ++LM GF   G  +R  E++  M       ++  Y++LI+G 
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAA 365
           CK+ +V+EA+ ++ ++  KG KP VV Y+++ +GL      E A++L+ EM  QG D   
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY   ++ LC +  +
Sbjct: 550 DVVTYNILLNTLCKQSSI 567



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 184/391 (47%), Gaps = 25/391 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L K    D  +SL   +   G FP   T+++LIN  CK G +S    +
Sbjct: 232 PDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKL 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT+ +LI GLC + ++ +A +L  ++ +  C PNV+TY T+INGL +
Sbjct: 292 VDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +    +   M          +  N   YS +I GL KEG   +A  LF +M  +  
Sbjct: 352 QGRALDGACVLALMEERG------YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGY 405

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + Y+++I G C     ++A  +L EM ++G  PN  + + +M    + G    A  
Sbjct: 406 ELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVE 465

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M + +   N   Y+ L+ G C  GK+     ++  M   GCK D  +Y+ +ING  
Sbjct: 466 VWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLS 525

Query: 309 KNKEVEEALSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVA 364
               VE+A+ LYNE+  +G   +P VVTYN L + L +     RA+ L   M  +G D  
Sbjct: 526 IAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPD 585

Query: 365 ADTCTY---------------RTFIDGLCVR 380
             TCT                R F+D L VR
Sbjct: 586 LVTCTIFLRMLREKLDPPQDGREFLDELVVR 616



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 6/308 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            +PNV+TF  +IK +C    + +A  +F  +    CEP+V TY TL++GLC+      A+
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L  EM     +I   F P+ VT++++I+GLCK+G + +A +L   M  +   PN VTY 
Sbjct: 255 SLLDEM-----QIDGCF-PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +LIHG C      +A  LL  MV     PNVV+   I+N L K G+  + + +L LM + 
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
               N + Y+TL+ G    GK      LF  M   G + +   Y+ +I+G C++ + ++A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + + +E+  KG  P   T ++L  G FE   + RA++++ +M  ++   +   Y   I G
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488

Query: 377 LCVRPQVR 384
           LC   +V+
Sbjct: 489 LCKDGKVK 496



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 163/339 (48%), Gaps = 18/339 (5%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGR-------ILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           T+  LIN +  +G       +  R       I   CF   +V F +  K    E    +A
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCF---IVIFKAYGKAHLPE----KA 144

Query: 101 AALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
             LF ++   F C+    ++N+++N + + G    AL  +  +    G  GV   PN +T
Sbjct: 145 VDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVI---GAKGVSISPNVLT 201

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++I  +CK G VD A ++F  M      P+V TY +L+ G C A+  +EA  LL EM 
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQ 261

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P+ V+ NV++N LCK G +  A++L+D M      PN  TYNTL+ G CL GK+ 
Sbjct: 262 IDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLE 321

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +   L   M S  C  +  +Y  +ING  K     +   +   +  +G       Y+TL 
Sbjct: 322 KAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLI 381

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+  +++ A+ LF EM       +T  Y   IDGLC
Sbjct: 382 SGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLC 420



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 132/269 (49%), Gaps = 20/269 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ ++  L ++   D  + +   + + G  P+ YT S L+  F + G       ++  + 
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +  F  N V ++ LI GLC + ++ EA  ++T++   GC+P+V+ Y+++INGL   G   
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVE 531

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+ L+ EM       G   +P+ VTY+I+++ LCK+  + +A +L   M     +P++V
Sbjct: 532 DAMQLYNEMLCQ----GPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLV 587

Query: 194 TYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           T T  +       D   + +  L E+V +               L K  ++  AS+++++
Sbjct: 588 TCTIFLRMLREKLDPPQDGREFLDELVVR---------------LLKRQRVLGASKIVEV 632

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           M+Q  + P   T+  +++  C   K+  V
Sbjct: 633 MLQKLLPPKHSTWARVVENLCKPKKVQAV 661


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 201/374 (53%), Gaps = 9/374 (2%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLS--LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P + + N LL  L + N  +  V S  +F+    +G+ P++ T++ILI+ +C        
Sbjct: 171 PNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEA 230

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++      P+ VT+ +++  LC  S++ +   L  ++K  G  PN  TYN L++G
Sbjct: 231 LRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHG 290

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+      A  + + MT G G +     P+  TY+ ++ GLC EG +D+A  L  +M+ 
Sbjct: 291 YCKLKWLKEAAEVIELMT-GKGML-----PDVWTYNTMVRGLCDEGKIDEAVRLRDKMES 344

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P+VVTY +LI G       + A  L+ EM  +GV+ N V+ N+++   C  GK+D 
Sbjct: 345 FKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDE 404

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS ++  MV+    P+ FTYNT+++G+C  GK+    ++   M   G K D F+ N L++
Sbjct: 405 ASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLH 464

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             C  K++++A +L  +   +G     VTY TL  G F+  QA+RALKL+ EM+   + A
Sbjct: 465 TMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524

Query: 366 DTCTYRTFIDGLCV 379
              TY T I GLC+
Sbjct: 525 TIITYNTIIRGLCL 538



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 187/372 (50%), Gaps = 10/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FNIL+     + + +  L L  ++   G  PD  TY+ ++   CK  Q++    +
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  S   PN  T+  L+ G C    + EAA +   +   G  P+V TYNT++ GLC 
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFK--PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            G    A+ L  +M +        FK  P+ VTY+ +IDG  +    D A +L  +MK  
Sbjct: 329 EGKIDEAVRLRDKMES--------FKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR 380

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  N VT+  +I  FC     +EA  ++++MV+ G  P+  + N ++N  CK GKM  A
Sbjct: 381 GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEA 440

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +++D M +  ++ + FT NTL+   CL  +++    L +     G   D+ +Y  LI G
Sbjct: 441 YKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMG 500

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K+++ + AL L+ E+   GI  T++TYNT+  GL    + ++A+    E+    +  D
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560

Query: 367 TCTYRTFIDGLC 378
             T    I G C
Sbjct: 561 ESTSNIIIHGYC 572



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 49/435 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILIN-CFCKMGQVSLGFV 67
           P V ++N ++  L      D  + L  ++ S  L PD+ TY+ LI+ CF   G  +  F 
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA-AFK 372

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +       N VT   +IK  C E +I EA+ +  K+   G  P+  TYNT+ING C
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNT------------------------------ 157
           + G    A  +  EM     ++   F  NT                              
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDT-FTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE 491

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY  +I G  K+   D+A +L+ +MK   +   ++TY ++I G C +   ++A   L E
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE 551

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           ++++G+ P+  +SN+I++  C  G ++ A +  + MV+  ++P+ FT N L+ G C  G 
Sbjct: 552 LLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + +   LF +  S G   D  +YNI+I+ +CK + +E+A  L  E+  K ++P   TYN 
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNA 671

Query: 338 LFHGLFEIRQAERALKLFV-------EMQGNDVAADTCT----YRTFIDGLCVRPQVR-- 384
           +  GL +  + E A KL +       +++  D + +  T    Y   I  LC + + +  
Sbjct: 672 IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDA 731

Query: 385 ---FTYARRKGNSGN 396
              F  A +KG S N
Sbjct: 732 MKLFQQAEQKGVSLN 746



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 17/351 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    K         +   +   GL  D +T + L++  C   Q+   + +
Sbjct: 419 PDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTL 478

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +  +  +  + VT+ +LI G   + +   A  L+ ++K  G    +ITYNT+I GLC 
Sbjct: 479 TMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCL 538

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G T  A++   E+     E G+V  P+  T +III G C EG V+KA +   +M   +L
Sbjct: 539 SGKTDQAVDKLNELL----EKGLV--PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ T   L+ G C      +   L    + +G   + V+ N+I++  CK  ++++A  
Sbjct: 593 KPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFD 652

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK-----------HDD 297
           L+  M   ++ P+ +TYN ++ G    G+    ++L +     G +             D
Sbjct: 653 LMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSD 712

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
             Y+  I+  C   + ++A+ L+ +   KG+     TY  L  GL + R++
Sbjct: 713 MMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKS 763



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 38/281 (13%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           +F K+K     PN++T NTL+N L R+                N    +VF         
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRS----------------NSSHSLVF--------- 194

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
                        ++E+F       + PNV T+  LIHG+C  N+  EA  L+ +M + G
Sbjct: 195 -------------SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYG 241

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P+ V+ N ++  LCK  ++     LL  M    + PN  TYN L+ G+C    +    
Sbjct: 242 CCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAA 301

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E+   M   G   D ++YN ++ G C   +++EA+ L +++    + P VVTYNTL  G 
Sbjct: 302 EVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGC 361

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           FE R ++ A KL  EM+   V  +  T+   I   C   ++
Sbjct: 362 FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKI 402



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 115/202 (56%), Gaps = 3/202 (1%)

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE---AKGLLIEMVDQGVQPNVVSSNVIM 234
           ++F +MK     PN++T  +L++    +N  +    ++ +  + V  GVQPNV + N+++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +  C +   + A RL++ M +    P+  TYNT++   C   ++ +V++L + M++ G  
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +YNIL++GYCK K ++EA  +   +  KG+ P V TYNT+  GL +  + + A++L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 355 FVEMQGNDVAADTCTYRTFIDG 376
             +M+   +  D  TY T IDG
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDG 360



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 5/221 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+ NI++         +       ++    L PD++T +IL+   C+ G +  G  +
Sbjct: 559 PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTL 618

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   +      + VT+  +I   C E R+ +A  L T+++    EP+  TYN ++ GL +
Sbjct: 619 FNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G T  A  L  +      ++           + + YS  I  LC +G    A +LF Q 
Sbjct: 679 AGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQA 738

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           + + ++ N  TY  L+ G            LL  MV   +Q
Sbjct: 739 EQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + + NILL  L +    +  L+LF    S G   D  TY+I+I+ FCK  ++  
Sbjct: 590 HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLED 649

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE-------PNVI 117
            F +   +      P+  T+ +++ GL    R  EA  L  K    G +       P + 
Sbjct: 650 AFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELG 709

Query: 118 T----YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
           T    Y+  I+ LC  G    A+ LF++      + GV    N  TY  ++DGL K
Sbjct: 710 TSDMMYSEQISSLCTQGKYKDAMKLFQQAE----QKGVSL--NKYTYIKLMDGLLK 759


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 197/405 (48%), Gaps = 47/405 (11%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  ++    K    D    L   +   G+  D+  +S LI   C+ G++      F  + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-----AFGCEPNVITYNTLINGLCR 128
             C +PNV+T+ +++ GLC  +RI E   LF  ++     + GCEP+VI+Y+T+I+ LC+
Sbjct: 62  EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   FK M        V   PN VTYS +IDGLCK   VD+A  L +Q+K E++
Sbjct: 121 AQRVDKAYEYFKRMR------AVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV------------------------- 223
            P  + Y ++++GF      +E   LL+ M ++G                          
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 224 ----------QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                     +PNVV+ NV ++ LCK GK+D A R+L  MV+  V P+  TY++++DGFC
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G++++  ++F  M    C     ++  L++G+ ++K+  EA  ++ ++   G  P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN L   +      E AL+++ +M+      D  TY   I  LC
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLC 399



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 187/428 (43%), Gaps = 60/428 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V S++ ++  L K +  D     FKR+ ++G  P++ TYS LI+  CK+ +V  
Sbjct: 102 HGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDE 161

Query: 65  GFVIFGRILRSCFAP-----------------------------------NVVTFTSLIK 89
            + +  ++      P                                   N++ F +++ 
Sbjct: 162 AYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLH 221

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
            L       +A   F +L   G +PNV+TYN  ++GLC+ G    A  +  EM       
Sbjct: 222 ALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK--- 278

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                P+ +TYS IIDG CK G +DKA ++F +M      P+ VT+ +L+HGF       
Sbjct: 279 ---VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSR 335

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  +  +MV+ G  P + + NV+M+ +C    +++A  +   M +   +P+A TY  L+
Sbjct: 336 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLI 395

Query: 270 DGFCLTGKINRVKELFVSMES---------------MGCKHD--DFSYNILIN--GYCKN 310
              C   +++  KE    ME+               + CK    D + ++L N    CK 
Sbjct: 396 QCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKA 455

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            E +EA+ +  ++  KG++P   TY  +   L  + + + A+  F +M     A    TY
Sbjct: 456 GEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTY 515

Query: 371 RTFIDGLC 378
              I   C
Sbjct: 516 TLLIGEAC 523



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 161/349 (46%), Gaps = 29/349 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  FN +L  L KN   +     F+RL   G  P++ TY++ ++  CK G+V   + I  
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++ S   P+V+T++S+I G C   R+ +A  +FT++    C P+ +T+ TL++G     
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            +  A  + ++M N        F P   TY++++D +C    V+ A E++ +MK +   P
Sbjct: 333 KSREAFRVHEDMVNAG------FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 386

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN---------------------VVS 229
           +  TY  LI   C A   +EAK  L  M    V PN                      V 
Sbjct: 387 DANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 446

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            NV+  E+CK G+ D A  +++ MV   VRP+  TY  ++   C   +++     F  M 
Sbjct: 447 DNVV--EICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           S GC     +Y +LI   C     ++A  ++  +   G  P   T  TL
Sbjct: 505 SRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 23/261 (8%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+   +L G  +++K       + + + + G  P L TY++L++C C    V     
Sbjct: 316 PHPVTFMTLLHG-FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 374

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I+ ++ R    P+  T+  LI+ LC   R+ EA      ++A    PN    + L+  LC
Sbjct: 375 IYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 434

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A ++   +                        +CK G  D+A E+  QM  + 
Sbjct: 435 KQGEVDEACSVLDNVVE----------------------ICKAGEPDEAVEVIEQMVLKG 472

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+  TY +++   C  +  + A     +M  +G  P +V+  +++ E C     D+A 
Sbjct: 473 VRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAF 532

Query: 248 RLLDLMVQCDVRPNAFTYNTL 268
           R+ + MV     P A T  TL
Sbjct: 533 RIFEAMVAAGFTPQAQTMRTL 553



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 6/161 (3%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  CK G++D A  LLD M +  V+ +   ++TL+ G C  G+I+   E F SM    
Sbjct: 5   VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEE 63

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFK-----GIKPTVVTYNTLFHGLFEIRQ 347
           C  +  +YN ++NG CK   ++E L L++++  +     G +P V++Y+T+   L + ++
Sbjct: 64  CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            ++A + F  M+    A +  TY + IDGLC   +V   Y+
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYS 164



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 49/111 (44%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           + K    D  + + +++   G+ PD  TY  ++   C + +V      F ++     AP 
Sbjct: 452 ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPG 511

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +VT+T LI   C+     +A  +F  + A G  P   T  TL + L   G+
Sbjct: 512 LVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LSL + +   G  P + TY+  I   CK+G++S        +L +   P+VV++ +LI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C    +++A  LF +L++    P ++TYNTL++GLCR G   VA  L  EM N     
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG--- 439

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                P+ VTY+I+++G CK G +  A+E F +M +E L  +   Y + I G     D +
Sbjct: 440 ---IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  L  EM+ +G  P+++  NV+++ LCK G ++ AS LL  MV   V P+  TY +++
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
                 G++ + +E+F  M S G      +Y +LI+G+     +E A   ++E+  KGI 
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+TYN+L +GL ++R+ ++A   F EM    +  +  +Y   I+  C
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 185/381 (48%), Gaps = 35/381 (9%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P V+++N  +  L K       +     + +  L PD+ +Y+ LI  +C++G +   F
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           ++F  +      P +VT+ +L+ GLC +  +  A  L  ++   G  P+++TY  L+NG 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNT 157
           C+ G   +A   F EM +   E+                                F P+ 
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           + Y++++DGLCK G +++A EL  +M  + + P+ VTYTS+IH         + + +  E
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+ +G+ P+VV+  V+++     G+++ A      M +  + PN  TYN+L++G C   +
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +++    F  M   G   + +SY ILIN  C     +EALSLY ++  +G++P   T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 338 LFHGLFE------IRQAERAL 352
           L   L +      +RQ E  L
Sbjct: 695 LLKQLGKDCKLQAVRQLESLL 715



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 190/440 (43%), Gaps = 76/440 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L         + +++ +   G+ P + TY+ L++ +CK G+V  G  +
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF-------TKLKAF----------- 110
              + R   APN VT+  LI GL  +    +A  L         K+ A+           
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 111 -----------------GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                            G  P V TYN+ I GLC+ G    A+    +M   N       
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------L 370

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V+Y+ +I G C+ G + KA  LF +++   L P +VTY +L+ G C   +   A+ 
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR-------------- 259
           L +EM+++G+ P++V+  +++N  CK G +  A    D M+   +               
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490

Query: 260 ---------------------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
                                P+   YN ++DG C  G +    EL   M S G   D  
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  +I+ + +N  + +   ++ E+  KG+ P+VVTY  L HG     + ERA   F EM
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 359 QGNDVAADTCTYRTFIDGLC 378
           Q   +  +  TY + I+GLC
Sbjct: 611 QEKGILPNVITYNSLINGLC 630



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 6/326 (1%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +LI  + K   V     +F ++++S  +P+V     +++ L  +  + +A  ++  +  F
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G +P ++TYNTL++  C+ G     L+L  EM            PN VTY+++I+GL K+
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC------APNDVTYNVLINGLSKK 282

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G  ++AK L  +M    L  +  TY  LI+G+ +     EA  L  EMV +G  P V + 
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N  +  LCK G+M +A + L  M+  ++ P+  +YNTL+ G+C  G + +   LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +       +YN L++G C+  E+E A  L  E+  +GI P +VTY  L +G  ++     
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDG 376
           A + F EM    +  D+  Y T I G
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVG 488



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 172/372 (46%), Gaps = 6/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S   V   ++L+   +K    +  LS+F ++    L PD+   + ++        +S   
Sbjct: 160 SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 219

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            ++  +      P +VT+ +L+   C   ++ +   L ++++  GC PN +TYN LINGL
Sbjct: 220 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A  L  EM           K +  TY+ +I G   +G + +A  L  +M  +
Sbjct: 280 SKKGEFEQAKGLIGEMLKTG------LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P V TY S I+G C     ++A   L +M+   + P+VVS N ++   C+ G +  A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L D +    + P   TYNTL+DG C  G++   ++L V M + G   D  +Y IL+NG
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +  A   ++E+  +G++     Y T   G  ++    RA  L  EM       D
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 367 TCTYRTFIDGLC 378
              Y   +DGLC
Sbjct: 514 LIIYNVVVDGLC 525



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 41/317 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG--- 65
           P + ++N LL  L +    +    L   + + G+ PD+ TY+IL+N  CKMG +S+    
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 66  --------------------------------FVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                           F +   +L   F P+++ +  ++ GLC 
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              + EA+ L  K+ + G  P+ +TY ++I+     G       +F EM +         
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG------L 580

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ VTY+++I G   +G +++A   F +M+ + + PNV+TY SLI+G C     ++A  
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              EMV++G+ PN  S  +++NE C  G    A  L   M+   V+P++ T++ L+    
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700

Query: 274 LTGKINRVKELFVSMES 290
              K+  V++L   ++S
Sbjct: 701 KDCKLQAVRQLESLLDS 717


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 191/359 (53%), Gaps = 14/359 (3%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L   G   D+ +Y++LI+ +CK G++     +  R+     +PN  T+ +++  LC   +
Sbjct: 140 LEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGK 196

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A  +  +     C P+V+T   LI+  C+      A+ LF EM N         KP+
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG------CKPD 250

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+++I G CK G +D+A     ++      P+V+++  ++   C    W +A  LL 
Sbjct: 251 VVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLA 310

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M+ +G  P+VV+ N+++N LC+ G +  A  +L++M +    PN+ ++N L+ GFC   
Sbjct: 311 TMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGK 370

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            I+R  E    M S GC  D  +YNIL+   CK+ +V++A+ + ++L  KG  P++++YN
Sbjct: 371 GIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYN 430

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARR 390
           T+  GL ++ +AE A++L  EM    +  D  T  + + GL    +VR     F Y +R
Sbjct: 431 TVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKR 489



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 32/396 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+S+N+L+    K+   +  L +  R+   G+ P+  TY  ++   C  G++     + G
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R L+S   P+VVT T LI   C ES + +A  LF +++  GC+P+V+TYN LI G C+ G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 131 HTIVALNLFKEMTNGNGEIGVVFK-----------------------------PNTVTYS 161
               A+   K++ +   +  V+                               P+ VT++
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+I+ LC++G + KA  +   M      PN  ++  LI GFC+    + A   L  MV +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P++V+ N+++  LCK+GK+D+A  +L  +      P+  +YNT++DG    GK    
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            EL   M   G K D  +   ++ G  +  +V EA+  ++ L    I+P    YN++  G
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L + +Q   A+    +M          TY T I G+
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGI 541



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 3/212 (1%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + G +++       M  +  +P+V+  T+LI  FC       A  ++  + + G   +
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V S NV+++  CK+G+++ A R+LD M    V PNA TY+ ++   C  GK+ +  ++  
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                 C  D  +  +LI+  CK   V +A+ L+NE+  KG KP VVTYN L  G  +  
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + A++   ++       D  ++   +  LC
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLC 297



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 6/223 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   H   P   SFN L+      K  D  +   + + S G +PD+ TY+IL+   CK G
Sbjct: 346 MMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDG 405

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V    VI  ++     +P+++++ ++I GL    +   A  L  ++   G +P++IT  
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 465

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +++ GL R G    A+  F  +           +PN   Y+ II GLCK      A +  
Sbjct: 466 SVVGGLSREGKVREAMKFFHYLKR------FAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
             M  +   P   TYT+LI G  +     +A  L  E+  +G+
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 3/145 (2%)

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  L +NG+++  SR L+ M      P+      L+  FC  G+     ++   +E  G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  SYN+LI+GYCK+ E+EEAL + + +   G+ P   TY+ +   L +  + ++A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           +      +    D  T    ID  C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATC 227


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 184/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P+ +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + L
Sbjct: 101 HKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRL 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F   + T   +++ L            +
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQ 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDSAFEHRK 341



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 137/279 (49%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +       + T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ LL  L++      V+  + R+ S G+ P+L  Y+ +IN  CK G V+    I  ++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S  +P+  T+TS+I G C +  +  A  +F ++   GCEPN +TY+TLINGLC +G  
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L +EM       G++   +T T  II   LC  G  + A  LF+ MK +   PNV
Sbjct: 472 NEAFDLIREMILH----GILPTAHTCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNV 525

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI G C +     A GL   M   GV PN V+ N ++N L +N ++  A  +L+L
Sbjct: 526 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 585

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  +  N  TYN ++ G+C+ G   +   +  +M   G   +  +YN +I GYC +  
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 645

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
              AL + + +   G KP   +Y  L  G  +I + E A  LF EM  + +  +  TY  
Sbjct: 646 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 705

Query: 373 FIDGLC 378
            IDG C
Sbjct: 706 LIDGYC 711



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 188/372 (50%), Gaps = 7/372 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  +++LG   K+   D+ L +F ++   G  P+  TYS LIN  C  G+V+  F
Sbjct: 417 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 475

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     P   T T  I  LC      +A  LF  +K  GCEPNV TY  LI+GL
Sbjct: 476 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C +G   VA+ LF  M+        VF PNTVTY+ +I+ L +   +  A  +   M   
Sbjct: 536 CVSGLLKVAIGLFHRMSRDG-----VF-PNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  N+VTY  +I G+C   D  +A  ++  M+ +G   N+V+ N I+   C +G   +A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+LDLM     +P+ ++Y  L+ GFC   K+     LF  M   G   ++ +Y  LI+G
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YCK+++++ A SL   +   G +P V TYN L HGL +      A +L   M    +  +
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 367 TCTYRTFIDGLC 378
             TY   IDGLC
Sbjct: 770 VVTYTAMIDGLC 781



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 166/334 (49%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L +N+       +   +   GLF ++ TY+ +I  +C +G      ++
Sbjct: 558 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+   + N+VT+ ++IKG C       A  +   ++  GC+P+  +Y  LI G C+
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF EM +          PN VTY+ +IDG CK+  +D A  L   MK    
Sbjct: 678 ISKMESAFGLFNEMVDDG------LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV TY  LIHG    N+++ A+ L   M+++G+ PNVV+   +++ LCKNG    A  
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M++    PN  TY++L+      GK+   + LF  +E  G   D+ +Y  +I  Y 
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            + +VE A +    +   G +PT+ TY  L  GL
Sbjct: 852 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L  +      + LF R++  G+FP+  TY+ LIN   +  ++   FV+
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+    N+VT+  +IKG C      +A  +   +   G   N++TYNT+I G C 
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+T  AL +   M +G        KP+  +Y+ +I G CK   ++ A  LF +M  + L
Sbjct: 643 SGNTTSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTYT+LI G+C     + A  LL  M   G +PNV + NV+++ L K      A  
Sbjct: 697 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 756

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M++  + PN  TY  ++DG C  G  +   E+F  M   GC  +  +Y+ LI    
Sbjct: 757 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 816

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +VEEA +L+ EL   G+ P  +TY  +        + E A      M          
Sbjct: 817 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 876

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 877 TYGVLIKGL 885



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 6/361 (1%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           Y+    LF  + + G  P++YTY+ LI+  C  G + +   +F R+ R    PN VT+ +
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 565

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LI  L    RI  A  +   +   G   N++TYN +I G C  G    A+ +   M    
Sbjct: 566 LINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                    N VTY+ II G C  G    A  +   M+     P+  +YT LI GFC  +
Sbjct: 626 ------HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
               A GL  EMVD G+ PN V+   +++  CK+ K+D A+ LL+ M +   RPN  TYN
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G       +  +EL   M   G   +  +Y  +I+G CKN     AL ++N++  +
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G  P ++TY++L   L +  + E A  LF E++ + +  D  TY   I+   +  +V   
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 387 Y 387
           +
Sbjct: 860 F 860



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LIK   ++  +    +    L   G    +  Y+ L+  L R G T   ++ +  M +  
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                  +PN + Y+ +I+ LCK+G V  A+ +  ++    ++P+  TYTS+I G C  +
Sbjct: 381 ------VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 434

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D + A  +  +M  +G +PN V+ + ++N LC +G+++ A  L+  M+   + P A T  
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
             +   C  G       LFV M++ GC+ + ++Y  LI+G C +  ++ A+ L++ +   
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           G+ P  VTYN L + L E R+ + A  +   M  N +  +  TY   I G C+
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCI 607



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 168/425 (39%), Gaps = 100/425 (23%)

Query: 13   SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
            ++N ++     + +  + L +   +   G  PD ++Y+ LI  FCK+ ++   F +F  +
Sbjct: 632  TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 73   LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI--------- 123
            +     PN VT+T+LI G C + ++  A +L   +K  GC PNV TYN LI         
Sbjct: 692  VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 124  --------------------------NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                                      +GLC+ G T +AL +F +M     E G +  PN 
Sbjct: 752  SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQGCL--PNL 805

Query: 158  VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI----------HGF----- 202
            +TYS +I  L +EG V++A+ LF +++   L P+ +TY  +I          H F     
Sbjct: 806  LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865

Query: 203  -----CHANDWNEA---KGLLIE--MVDQ--GVQPNVVS--------------------- 229
                 C    W      KGL  E  + DQ     P+VV                      
Sbjct: 866  MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 925

Query: 230  -----------SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                        N +++ L   G+   A+ LL  M+   + P+   YN+L+        +
Sbjct: 926  AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 985

Query: 279  NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +    +F  M + GC+     Y  LI   C+    +EA   +  +  +   P  V    L
Sbjct: 986  DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 1045

Query: 339  FHGLF 343
              GL 
Sbjct: 1046 IDGLL 1050



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 135/345 (39%), Gaps = 55/345 (15%)

Query: 1    MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
            + HM  S   P V ++N+L+  L K  ++     L K +   G+FP++ TY+ +I+  CK
Sbjct: 723  LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 782

Query: 59   MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             G  SL   +F +++     PN++T++SLI+ L  E ++ EA  LF +L+  G  P+ IT
Sbjct: 783  NGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 842

Query: 119  YNTLINGLCRTGHTIVALNLFKEMTNGNGE-----IGVVFK----------------PNT 157
            Y  +I     +G    A N    M     +      GV+ K                P+ 
Sbjct: 843  YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 902

Query: 158  V--------------------------------TYSIIIDGLCKEGFVDKAKELFLQMKY 185
            V                                  + ++  L   G   +A EL   M  
Sbjct: 903  VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 962

Query: 186  ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            + L P+   Y SL+       + + A G+   M  QG + ++     ++  LC+  +   
Sbjct: 963  QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 1022

Query: 246  ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            A    + M+     P+      L+DG    G  +   E    ME+
Sbjct: 1023 ARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 1067


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 197/443 (44%), Gaps = 65/443 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR      P V ++  ++  L +    D   ++   L   G+ P + TY++L++  CK G
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG 260

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F + GR++     P++VTF  LI GL    +  E  A+  +++ FG  PN + YN
Sbjct: 261 RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYN 320

Query: 121 TLINGLCRTGH------------------TIVALNLFK-------EMTN----------- 144
            +I   CR GH                  T+V  NL         EM +           
Sbjct: 321 EMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLA 380

Query: 145 ------------------GNGEIGVVF-----------KPNTVTYSIIIDGLCKEGFVDK 175
                             G G + +V            KPN    +  I  LCK G  ++
Sbjct: 381 GMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEE 440

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A E++ Q+  + L  NV T  +LIHG C  N+  EA  +L  MV+ GV+ + ++ N+++ 
Sbjct: 441 AAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQ 500

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             CK  KMD A +L D M++   +P+ FT+N  +  +C  GK+  +  L   M+S G K 
Sbjct: 501 GCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKP 560

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  +Y  +I+GYCK K++ +A     EL   G++P  V YN L  G         A+ + 
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
             M+ N +     TY + +  +C
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMC 643



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 174/351 (49%), Gaps = 6/351 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D VL L + + +  L P+    +  I   CK G+      I+ ++L      NV T  +L
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNAL 463

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I GLC  + + EA  +   +   G E + ITYN +I G C+      A+ L  +M     
Sbjct: 464 IHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM----- 518

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            I   FKP+  T++I +   C  G V++   L  QMK E L P++VTY ++I G+C A D
Sbjct: 519 -IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            ++A   L E++  G++PN V  N ++    +NG + +A  +LD M    ++P   TYN+
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LM   C  G +  VK +F        +     Y I+I G+CK  +++EA+  + E+  +G
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           I P  +TY TL     +    E A KLF EM    +  D+ +Y T I G C
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 78/417 (18%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR-SCFAPNVVTFTSLIKGLC 92
           F  L++ G  P + T SIL+      GQ+ +   +FG +      AP+V T+T++IK LC
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALC 222

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               I  A A+  +L+  G +P V+TYN L++ LC++G    A  L   M  G       
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR------ 276

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+ VT+ I+I GL +     +   +  +M+   + PN V Y  +I   C     +EA 
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD------LMVQCD--------- 257
            L  EMV +G++  VV+ N+I   LCK G+M++A ++LD      +MV C          
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396

Query: 258 ---------------------VRPNAFTYNTLMDGFCLTGKINRVKELFV---------- 286
                                ++PN       +   C +GK     E++           
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456

Query: 287 -------------------------SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
                                    +M + G + D  +YNI+I G CK  +++EA+ L +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++  +G KP + T+N   H    + + E  L L  +M+   +  D  TY T IDG C
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 7/353 (1%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           KH +     F+ L   GL  ++ T + LI+  C+   +     +   ++ S    + +T+
Sbjct: 437 KHEEAAEIWFQVLGK-GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITY 495

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
             +I+G C  S++ EA  L   +   G +P++ T+N  ++  C  G     L+L  +M +
Sbjct: 496 NIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
                    KP+ VTY  IIDG CK   + KA E   ++    L PN V Y +LI G+  
Sbjct: 556 EG------LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGR 609

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
             + ++A G+L  M   G+QP  V+ N +M  +C  G ++    +    +  D+      
Sbjct: 610 NGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIG 669

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y  ++ GFC  GKI+     F  M S G   +  +Y  L+  Y K+   EEA  L++E+ 
Sbjct: 670 YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             GI P  V+YNTL  G  E+   ++ ++   EM    +  D C+Y  F+DG+
Sbjct: 730 SLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 12/309 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++NI++    K    D  + L   +   G  PDL+T++I ++ +C +G+V     +  ++
Sbjct: 494 TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM 553

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P++VT+ ++I G C    + +A    T+L   G  PN + YN LI G  R G+ 
Sbjct: 554 KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613

Query: 133 IVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
             A+ +   M  NG        +P  VTY+ ++  +C  G V++ K +F Q   +++   
Sbjct: 614 SDAIGILDTMKYNG-------IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           V+ YT +I GFC     +EA     EM  +G+ PN ++   +M    K+G  + AS+L D
Sbjct: 667 VIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING----Y 307
            MV   + P++ +YNTL+ GFC    ++++ E    M S   K D  SYN  ++G    +
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPW 786

Query: 308 CKNKEVEEA 316
           C+ + V  A
Sbjct: 787 CQKEAVSNA 795



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 160/391 (40%), Gaps = 33/391 (8%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P P SS   LL  +  + H         R     L P + T  +L +       +   
Sbjct: 58  PAPLPASSAQRLLQHILSDAHASA-----SRHAEDLLSPRVSTL-LLQSLVADRASLPSA 111

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLC---------------AESRIVEAAALFTKLKAF 110
             +  R+LR  F P  V   ++    C               A   +  AA  F +L A 
Sbjct: 112 RRLVSRLLR--FNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSAR 169

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  P++ T + L+  L   G   VA  +F EM +G         P+  TY+ +I  LC+ 
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-----TVAPDVHTYTAMIKALCRA 224

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D A  +  +++   + P VVTY  L+   C +    EA  L   MV+  V+P++V+ 
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            ++++ L +  +      +L  M    + PN   YN ++   C  G  +   +LF  M S
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS 344

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K    +YN++    CK  E+E A  + +E+   G+      +N++    + +R   R
Sbjct: 345 KGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVA--WHLRGTGR 402

Query: 351 ---ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               L+L  EM    +  +       I  LC
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELC 433



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS----LYNELPFKGIK 329
           L  ++ R   L V+  ++   H   + ++L+   C N     +LS     + EL  +G  
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATADLLVRA-CLNSPAPGSLSRAADAFLELSARGAS 172

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           P++ T + L   L    Q + A K+F EM+ G  VA D  TY   I  LC   ++   +A
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232

Query: 389 -----RRKG 392
                RR G
Sbjct: 233 MLAELRRSG 241


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 205/434 (47%), Gaps = 64/434 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+++G L + +  D  + L + +   GL PDLYTY ILIN FC   +     ++
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P  +T+ +LI G   +  I +A  +  ++ A G E N+I +NTL+NG+C+
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367

Query: 129 TGHTIVALNLFKEMTNGNGE------------------IGVVFK-----------PNTVT 159
            G    AL + +EM     E                  +   F+           P  +T
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427

Query: 160 YSIIIDGLC-----------------------------------KEGFVDKAKELFLQMK 184
           YS+II+GLC                                   KEG V++++ +  +M+
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + + P+V  Y SLI GFC A    EA+  L+EM+++ ++PN  +    ++   K G+M+
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 547

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A R  + M+ C V PN   Y  L++G C  G +     +F  + S     D  +Y++LI
Sbjct: 548 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 607

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G  +N ++ EA  +++EL  KG+ P   TYN+L  G  +    ++A +L  EM    + 
Sbjct: 608 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 667

Query: 365 ADTCTYRTFIDGLC 378
            D  TY   IDGLC
Sbjct: 668 PDIVTYNILIDGLC 681



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 187/370 (50%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++++++  L +  +     ++ + +   GL P+   Y+ L+    K G+V    +I
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+V  + SLI G C   R+ EA     ++      PN  TY   I+G  +
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A   F EM +     GV+  PN   Y+ +I+G CKEG V +A  +F  +    +
Sbjct: 543 AGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V TY+ LIHG       +EA G+  E+ ++G+ PN  + N +++  CK G +D AS+
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M    + P+  TYN L+DG C  G+I R K LF  +E  G   +  +Y  +++GYC
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K    A  L  E+  +G+ P    YN + +   +  + E+AL LF EM     A+ T 
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TV 775

Query: 369 TYRTFIDGLC 378
           ++ T I+G C
Sbjct: 776 SFNTLIEGYC 785



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 188/408 (46%), Gaps = 40/408 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++   +   +K    +     F  + S G+ P++  Y+ LI   CK G V+  F +
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 587

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  IL      +V T++ LI GL    ++ EA  +F++L+  G  PN  TYN+LI+G C+
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  L +EM            P+ VTY+I+IDGLCK G +++AK LF  ++   L
Sbjct: 648 QGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN------------- 235
            PN VTY +++ G+C + +   A  LL EM+ +GV P+    NVI+N             
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 236 ---------------------ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
                                  CK+GK+  A+ LL+ M++    PN  TY +L+D  C 
Sbjct: 762 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +   K L++ M+         +Y  L++GY     + E  +L+ E+  KGI+P  +T
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           Y  +            A KL  E+    +      Y   I  LC + +
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 191/424 (45%), Gaps = 48/424 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P + S N LLG L K    +    +F  + +  + PD+YTY+ +I+  CK+G V      
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 64  -------------------LGFVIFGRILRSC-----------FAPNVVTFTSLIKGLCA 93
                              +G +   R+L                P++ T+  LI G C 
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R  EA  +  ++   G +P  ITYN LI+G  R G    A  +  EM      +    
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM------VACGI 351

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           + N + ++ +++G+CK G ++KA E+  +M  + + P+  TY+ LI G C   +   A  
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM  + + P V++ +VI+N LC+ G +   + +L  MV   ++PNA  Y TLM    
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G++   + +   M   G   D F YN LI G+CK K +EEA +   E+  + ++P   
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV-------RFT 386
           TY     G  +  + E A + F EM    V  +   Y   I+G C    V       RF 
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 387 YARR 390
            +RR
Sbjct: 592 LSRR 595



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 192/445 (43%), Gaps = 77/445 (17%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC------ 57
           M+   P    +  L+   AK    +    + +R+   G+ PD++ Y+ LI  FC      
Sbjct: 453 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512

Query: 58  -----------------------------KMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
                                        K G++ +    F  +L     PNV  +T+LI
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572

Query: 89  KGLCAESRIVEAAA-----------------------------------LFTKLKAFGCE 113
           +G C E  + EA +                                   +F++L+  G  
Sbjct: 573 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PN  TYN+LI+G C+ G+   A  L +EM            P+ VTY+I+IDGLCK G +
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEI 686

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           ++AK LF  ++   L PN VTY +++ G+C + +   A  LL EM+ +GV P+    NVI
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N  CK  K + A  L   M++     +  ++NTL++G+C +GK+     L   M     
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +  +Y  LI+  CK   + EA  L+ E+  + + PT  TY +L HG   I        
Sbjct: 806 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           LF EM    +  D  TY   ID  C
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYC 890



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 185/360 (51%), Gaps = 8/360 (2%)

Query: 17  LLGCLAKNKHYDTVL--SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           L+ C+ +N      +  S+ K   S    P+   + +L++ + KMG +     +F     
Sbjct: 114 LIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKN 173

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
             F P++++  SL+  L   +++     +F  + A    P+V TY  +I+  C+ G+   
Sbjct: 174 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  +  EM    GE G    PN VTY++II GLC+   +D+A EL   M  + L P++ T
Sbjct: 234 AKRVLLEM----GEKGC--SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYT 287

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI+GFC      EAK +L+EM+D G++P  ++ N +++   + G ++ A R+ D MV
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
            C +  N   +NTL++G C  GK+ +  E+   M   G + D  +Y++LI G+C+ + + 
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 407

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A  L +E+  + + PTV+TY+ + +GL      +    +  EM  N +  +   Y T +
Sbjct: 408 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 184/377 (48%), Gaps = 7/377 (1%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R  + SP  V  F++L+    K       +++F    +    P L + + L+    K  +
Sbjct: 137 RSCNGSPNSVI-FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK 195

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L + +F  +      P+V T+T++I   C    + +A  +  ++   GC PN++TYN 
Sbjct: 196 VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I GLCR      A+ L + M +     G+V  P+  TY I+I+G C E    +AK + L
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDK----GLV--PDLYTYDILINGFCMEKRSREAKLMLL 309

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    L P  +TY +LI GF    D  +A  +  EMV  G++ N++  N ++N +CK G
Sbjct: 310 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 369

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           KM+ A  ++  M++  V P++ TY+ L++G C    + R  EL   M+         +Y+
Sbjct: 370 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           ++ING C+   ++   ++  E+   G+KP  V Y TL     +  + E +  +   M+  
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489

Query: 362 DVAADTCTYRTFIDGLC 378
            +  D   Y + I G C
Sbjct: 490 GILPDVFCYNSLIIGFC 506



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 173/394 (43%), Gaps = 28/394 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++++L+  L++N        +F  L   GL P+ +TY+ LI+  CK G V     +  
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P++VT+  LI GLC    I  A  LF  ++  G  PN +TY  +++G C++ 
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 131 HTIVALNLFKEMT-NGNGEIGVVFK---------------------------PNTVTYSI 162
           +   A  L +EM   G      ++                             +TV+++ 
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT 779

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+G CK G + +A  L  +M  +   PN VTYTSLI   C A    EAK L +EM ++ 
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V P   +   +++     G M   S L + MV   + P+  TY  ++D +C  G +    
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           +L   +   G      +Y+ LI   CK +E  E L L NE+   G +  + T + +  G 
Sbjct: 900 KLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGF 959

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                 + A ++   M      ++T +    +DG
Sbjct: 960 QIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 168/333 (50%), Gaps = 12/333 (3%)

Query: 50  SILINCFCKMGQVSLGFVIFGRIL---RSC-FAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           S LI C  +     L   + G I+   RSC  +PN V F  L+        +VEA  +F 
Sbjct: 112 SDLIKCIIRNSDSPLA--VLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFL 169

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
             K F   P++++ N+L+  L +       + LF ++ +G     V+  P+  TY+ +I 
Sbjct: 170 GPKNFEFRPSLLSCNSLLGDLLKGNK----VELFWKVFDGMCAHKVL--PDVYTYTNMIS 223

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
             CK G V  AK + L+M  +  +PN+VTY  +I G C A   +EA  L   MVD+G+ P
Sbjct: 224 AHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVP 283

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++ + ++++N  C   +   A  +L  M+   ++P   TYN L+DGF   G I +   + 
Sbjct: 284 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 343

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M + G + +   +N L+NG CK  ++E+AL +  E+  KG++P   TY+ L  G    
Sbjct: 344 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 403

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   RA +L  EM+   +A    TY   I+GLC
Sbjct: 404 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 46/352 (13%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++NIL+  L K    +   +LF  +   GL P+  TY+ +++ +CK    +  F +
Sbjct: 668  PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 727

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGL 126
               +L     P+   +  ++   C E +  +A  LF ++  K F    + +++NTLI G 
Sbjct: 728  LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA---STVSFNTLIEGY 784

Query: 127  CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            C++G    A +L +EM      I   F PN VTY+ +ID  CK G + +AK L+L+M+  
Sbjct: 785  CKSGKLQEANHLLEEM------IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 187  NLNPNVVTYTSL-----------------------------------IHGFCHANDWNEA 211
            N+ P   TYTSL                                   I  +C   +  EA
Sbjct: 839  NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898

Query: 212  KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
              L  E++ +G+  +V + + ++  LCK  +     +LL+ + +   R    T + +  G
Sbjct: 899  CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958

Query: 272  FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            F + G ++   E+  SM   G   +  S   L++G       E++ +L  ++
Sbjct: 959  FQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 75/160 (46%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V  +++M+   K G +  A  +       + RP+  + N+L+       K+    ++
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M +     D ++Y  +I+ +CK   V++A  +  E+  KG  P +VTYN +  GL  
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            R  + A++L   M    +  D  TY   I+G C+  + R
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 192/388 (49%), Gaps = 8/388 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS+FN LL  L K         L  ++   G+  +L+T++I I   C+ G +S    +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R    P+VVT+ +LI GLC  S +VEA     KL   G EP+  TYNTLI+G C+
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +      G I   F P+  TY  +I+GLC+   +D+A  LF     + L
Sbjct: 334 MGMLQNAEKILQ------GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+ Y  LI G C      +A  ++ EM + G   ++ + N+++N LCK G + +A+ 
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++  +     P+ FT+NTL+DG+C   K+    ++   M S G   D  +YN ++NG  
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + E+ +  +  +  KG  P  +TYN L   L +  +   AL L  E+    +  DT 
Sbjct: 508 KAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567

Query: 369 TYRTFIDGLCVRPQVRFTYA--RRKGNS 394
           ++ T I G      ++  Y   RR G  
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQ 595



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 183/372 (49%), Gaps = 7/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L KN +         +L + GL PD +TY+ LI+ +CKMG +     I
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKI 343

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   F P+  T+ SLI GLC    I  A ALF      G +P VI YN LI GLC+
Sbjct: 344 LQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL +  EM+  NG        +  TY+++I+GLCK G V  A  L      +  
Sbjct: 404 EGLILQALQMMNEMSE-NG-----CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY 457

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C          +L +M   GV P+V++ N ++N L K  K ++   
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + MV+    PN  TYN L +  C  GK+N   +L   + + G   D  S+  +I+G+ 
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577

Query: 309 KNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            N +++ A  L+  +  +  +  T  TYN + +   E        KLF+EM     A DT
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637

Query: 368 CTYRTFIDGLCV 379
            TYR  IDG C+
Sbjct: 638 YTYRVMIDGFCI 649



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 183/348 (52%), Gaps = 6/348 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           + +F+R++     P + +Y+ ++N   + G       +F R+      P+V TFT  IK 
Sbjct: 96  VDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKS 155

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C   R   A  L   + + GC+ N + Y T++ G     + + A  LF +M      IG
Sbjct: 156 FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML----RIG 211

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           +   P+  T++ ++  LCK+G V +++ L  ++  + +  N+ T+   I G C     + 
Sbjct: 212 IF--PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +L  ++ +G+ P+VV+ N ++  LCKN  +  A + L  +V   + P+ FTYNTL+D
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+C  G +   +++       G   D+F+Y  LING C+N E++ AL+L+N    KG+KP
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TV+ YN L  GL +     +AL++  EM  N  ++D  TY   I+GLC
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 6/378 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++  L ++ ++     +F R+ ++G+ PD+YT++I I  FC+  +      +
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      N V + +++ G   E+  VEA  LF  +   G  P+V T+N L++ LC+
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    +  L  ++             N  T++I I GLC++G +  A  +   +  E L
Sbjct: 229 KGEVQESERLLNKVLKKG------MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G C  ++  EA+  L ++V+ G++P+  + N +++  CK G + NA +
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L   +     P+ FTY +L++G C   +I+R   LF +    G K     YN+LI G C
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + +AL + NE+   G    + TYN + +GL ++     A  L  +        D  
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVF 462

Query: 369 TYRTFIDGLCVRPQVRFT 386
           T+ T IDG C + ++  T
Sbjct: 463 TFNTLIDGYCKQLKMETT 480



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 161/326 (49%), Gaps = 7/326 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+L+  L +       L +   ++  G   D++TY+++IN  CKMG VS    +
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P+V TF +LI G C + ++     +  K+ + G  P+VITYN+++NGL +
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +  F+ M     E G V  PN +TY+I+ + LCK G V++A +L  ++  + +
Sbjct: 509 AVKNEDLMETFETMV----EKGCV--PNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+ V++ ++I GF +  D   A  L   M +Q  V     + N+++N   +   +    
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGE 622

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L   M      P+ +TY  ++DGFC+TG  +   +  + M   G      ++  +IN  
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVV 333
           C    V EA+ + + +   GI P VV
Sbjct: 683 CVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 7/227 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N +L  L+K    + ++  F+ +   G  P+  TY+IL    CK G+V+ 
Sbjct: 490 HGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNE 549

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLI 123
              +   IL     P+ V+F ++I G      +  A  LF ++ + +       TYN +I
Sbjct: 550 ALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMI 609

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           N         +   LF EM  G         P+T TY ++IDG C  G  D   +  L+M
Sbjct: 610 NAFAEKLDLHMGEKLFLEMGAGG------CAPDTYTYRVMIDGFCITGNTDSGYKFLLEM 663

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             +   P++ T+  +I+  C  +  +EA  ++  MV  G+ P VV+S
Sbjct: 664 IEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNS 710



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 10/249 (4%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG-FVDKAKELFLQMKYENLNPNVV 193
           AL +F ++   +G     FK + +TY  II  L   G FV  A E  L     +++ +++
Sbjct: 23  ALEMFNKVKREDG-----FKHSLLTYKCIIQKLGFHGNFV--AMENVLAETRMDIDNSLL 75

Query: 194 --TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
              Y   +  +       EA  +   M     +P+V+S N IMN L ++G    A ++  
Sbjct: 76  EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    + P+ +T+   +  FC T + +    L  +M S GC+ +  +Y  ++ G+ +  
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN 195

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
              EA  L+N++   GI P V T+N L H L +  + + + +L  ++    + ++  T+ 
Sbjct: 196 YRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFN 255

Query: 372 TFIDGLCVR 380
            FI GLC +
Sbjct: 256 IFIQGLCRK 264



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 6/214 (2%)

Query: 175 KAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEM---VDQGVQPNVVSS 230
           KA E+F ++K E+    +++TY  +I       ++   + +L E    +D  +   V   
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIG 81

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              M    + GK+  A  + + M   +  P+  +YN +M+    +G   +  ++F+ M++
Sbjct: 82  --AMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +G   D +++ I I  +C+ K    AL L N +  +G +   V Y T+  G +E      
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE 199

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           A +LF +M    +  D  T+   +  LC + +V+
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQ 233


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 188/378 (49%), Gaps = 10/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + K    D  + LF+ +      PD YTY  L++  CK+ ++     +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 69  FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              + +  CF P+  TF  LI GLC +        L   +   GC PN +TYNTLI+GLC
Sbjct: 239 LDEMQIEGCF-PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    AL+L   M +          PN VTY  II+GL K+G       + + M+   
Sbjct: 298 LKGKLDKALSLLDRMVSSKC------VPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N   Y+ L+ G        EA  L  E +D+G + N V  + +++ LC++ K D A 
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L  M      PNAFT+++LM GF   G  ++  E++  M  + C  ++  Y++LI+G 
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAA 365
           CK+ +V EA+ ++ ++   G +P VV Y+++  GL +    E ALKL+ EM     D   
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY    + LC +  +
Sbjct: 532 DVITYNILFNALCKQSSI 549



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 10/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS-LGFV 67
           P   ++  L+  L K    D  +SL   +   G FP   T+++LIN  CK G  + +  +
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKL 273

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +    L+ C  PN VT+ +LI GLC + ++ +A +L  ++ +  C PN +TY T+INGL 
Sbjct: 274 VDNMFLKGC-VPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLV 332

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  +    +   M     E G +   N   YS+++ GL KEG  ++A  LF +   + 
Sbjct: 333 KQGRALDGARVLVLME----ERGYIV--NEYVYSVLVSGLFKEGKSEEAMRLFKESMDKG 386

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N V Y++L+ G C     +EA  +L EM D+G  PN  + + +M    + G    A 
Sbjct: 387 CKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAI 446

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   M + +   N   Y+ L+ G C  GK+     ++  M + GC+ D  +Y+ +I G 
Sbjct: 447 EVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506

Query: 308 CKNKEVEEALSLYNELPF--KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           C    VEEAL LYNE+       +P V+TYN LF+ L +     RA+ L   M       
Sbjct: 507 CDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDP 566

Query: 366 DTCTYRTFI 374
           D  T   F+
Sbjct: 567 DLVTCNIFL 575



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 171/341 (50%), Gaps = 11/341 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP   ++FN+L+  L K   +  V  L   +   G  P+  TY+ LI+  C  G++   
Sbjct: 249 PSP---ATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  R++ S   PN VT+ ++I GL  + R ++ A +   ++  G   N   Y+ L++G
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L + G +  A+ LFKE  +   ++      NTV YS ++DGLC++   D+A ++  +M  
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKL------NTVLYSALVDGLCRDRKPDEAMKILSEMTD 419

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   PN  T++SL+ GF    + ++A  +  +M       N V  +V+++ LCK+GK+  
Sbjct: 420 KGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVME 479

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDDFSYNIL 303
           A  +   M+    RP+   Y++++ G C  G +    +L+  M  +    + D  +YNIL
Sbjct: 480 AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNIL 539

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            N  CK   +  A+ L N +  +G  P +VT N     L E
Sbjct: 540 FNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLRE 580



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 24/342 (7%)

Query: 58  KMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----- 111
           KMG   +G   F  ++ +  ++ +  +   ++  +  E+R+    + F   KA+G     
Sbjct: 64  KMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLP 123

Query: 112 ---------------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
                          C+P V ++N+++N + + G    AL  +  +  G  ++ ++  PN
Sbjct: 124 NKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVV-GAKDMNIL--PN 180

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            +++++II  +CK G VD A ELF +M      P+  TY +L+ G C  +  +EA  LL 
Sbjct: 181 VLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLD 240

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  +G  P+  + NV++N LCK G     ++L+D M      PN  TYNTL+ G CL G
Sbjct: 241 EMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 300

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K+++   L   M S  C  ++ +Y  +ING  K     +   +   +  +G       Y+
Sbjct: 301 KLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYS 360

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  GLF+  ++E A++LF E        +T  Y   +DGLC
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLC 402



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 29/291 (9%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L+  L K    +  + LFK     G   +   YS L++  C+  +      I   + 
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               APN  TF+SL+KG        +A  ++  +    C  N + Y+ LI+GLC+ G  +
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK--YENLNPN 191
            A+ ++ +M      +    +P+ V YS +I GLC  G V++A +L+ +M     +  P+
Sbjct: 479 EAMMVWAKM------LATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPD 532

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN---------------- 235
           V+TY  L +  C  +  + A  LL  M+D+G  P++V+ N+ +                 
Sbjct: 533 VITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFL 592

Query: 236 -----ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
                 L K  +   AS+++++M+Q  + P A T+  ++   C   KI  V
Sbjct: 593 DELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAV 643



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 4/232 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           FK    T+  +I+        +  +++  +M+ EN   +  ++  +   +  A+  N+A 
Sbjct: 68  FKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAI 127

Query: 213 GLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV---QCDVRPNAFTYNTL 268
            L   M  +   +P V S N ++N + + G  D A    + +V     ++ PN  ++N +
Sbjct: 128 ELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLI 187

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +   C  G ++   ELF  M    C  D ++Y  L++G CK   ++EA+SL +E+  +G 
Sbjct: 188 IKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGC 247

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            P+  T+N L +GL +     R  KL   M       +  TY T I GLC++
Sbjct: 248 FPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 299


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 204/415 (49%), Gaps = 43/415 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N +L  L K    +    L   + + GL P+  T++IL++ +CK+G +     +
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   P+V T+  LI GLC + +I EA  L  +++     P+V+TYNTLING   
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              ++    L  +M  G G      KPN VTY++++    KEG +D A     +M+    
Sbjct: 365 CSSSLKGFELIDKM-EGKG-----VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VT+ +LI+G+C A   +EA  ++ EM  +G++ N V+ N I++ LC   K+D+A +
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478

Query: 249 LL-----------------------------------DLMVQCDVRPNAFTYNTLMDGFC 273
           LL                                   D M + ++ P+  TYNT++ G C
Sbjct: 479 LLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC 538

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +GK ++  +    +   G   D+ +YN +I GYC+  +VE+A   +N++  K  KP + 
Sbjct: 539 HSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLF 598

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           T N L  GL      ++ALKLF        A D  TY T I GLC   + RF  A
Sbjct: 599 TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLC--KEDRFEEA 651



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 193/379 (50%), Gaps = 32/379 (8%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCK---MGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
            +F R+  + L P+L T + LIN   +      V L   IF  +++     N  TF  LI
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILI 219

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN---- 144
            G C E+++ EA  L  K+K F C P+ ++YNT+++ LC+ G    A +L  +M N    
Sbjct: 220 YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLL 279

Query: 145 -----------GNGEIGVVFK--------------PNTVTYSIIIDGLCKEGFVDKAKEL 179
                      G  ++G + +              P+  TY+++I GLCK+G +D+A  L
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+   L P+VVTY +LI+G    +   +   L+ +M  +GV+PN V+ NV++    K
Sbjct: 340 KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GKMDNA   L  M +    P+  T+NTL++G+C  G+++    +   M   G K +  +
Sbjct: 400 EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            N +++  C  +++++A  L +    +G     V+Y TL  G F+  ++  A+KL+ EM+
Sbjct: 460 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519

Query: 360 GNDVAADTCTYRTFIDGLC 378
             ++     TY T I GLC
Sbjct: 520 EKEIIPSIITYNTMIGGLC 538



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILIN-CFCKMGQVSLGFV 67
           P V ++N+L+G L K+   D    L   + ++ L PD+ TY+ LIN CF     +  GF 
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK-GFE 373

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++      PN VT+  ++K    E ++  A     K++  G  P+ +T+NTLING C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  +  EM+          K N+VT + I+  LC E  +D A +L        
Sbjct: 434 KAGRLSEAFRMMDEMSRKG------LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              + V+Y +LI G+       EA  L  EM ++ + P++++ N ++  LC +GK D + 
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L+ +++  + P+  TYNT++ G+C  G++ +  +    M     K D F+ NIL+ G 
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    +++AL L+N    KG     VTYNT+  GL +  + E A  L  EM+   +  D 
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667

Query: 368 CTYRTFIDGLC 378
            TY   +  L 
Sbjct: 668 YTYNAILSALA 678



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 177/395 (44%), Gaps = 29/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K    D   +  +++   G  PD  T++ LIN +CK G++S  F +
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRM 444

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R     N VT  +++  LC E ++ +A  L +     G   + ++Y TLI G  +
Sbjct: 445 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 504

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G ++ A+ L+ EM     E  ++  P+ +TY+ +I GLC  G  D++ +   ++    L
Sbjct: 505 DGKSVEAMKLWDEMK----EKEII--PSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY ++I G+C      +A     +MV +  +P++ + N+++  LC  G +D A +
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  +      +A TYNT++ G C   +     +L   ME      D ++YN +++   
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 309 KNKEVEEALSLYNELPFKG-----------------------IKPTVVTYNTLFHGLFEI 345
               ++EA    + +  +G                         P  VT++   + L   
Sbjct: 679 DAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQ 738

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            + + A+ +  E     +     TY + ++GL  R
Sbjct: 739 GKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 160/297 (53%), Gaps = 3/297 (1%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V   + I    A +R   AA +F ++K    +PN++T NTLIN L R   +  ++ L K 
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRY-PSKPSVYLSKA 198

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           + +   ++GV  K NT T++I+I G C E  + +A  L  +MK  +  P+ V+Y +++  
Sbjct: 199 IFSDVIKLGV--KVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDV 256

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C     NEA+ LL++M + G+ PN  + N++++  CK G +  A++++DLM Q +V P+
Sbjct: 257 LCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPD 316

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            +TYN L+ G C  GKI+    L   ME++    D  +YN LING        +   L +
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELID 376

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++  KG+KP  VTYN +     +  + + A     +M+ +  + D  T+ T I+G C
Sbjct: 377 KMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++G L  +   D  +     L   GL PD  TY+ +I  +C+ GQV   F  
Sbjct: 525 PSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQF 584

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++  F P++ T   L++GLC E  + +A  LF    + G   + +TYNT+I+GLC+
Sbjct: 585 HNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCK 644

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-------- 180
                 A +L  EM            P+  TY+ I+  L   G + +A+E          
Sbjct: 645 EDRFEEAFDLLAEMEEKK------LGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGK 698

Query: 181 LQMKYENLN---------------PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           LQ +  +LN               PN VT++  I+  C    + +A  ++ E   +G+  
Sbjct: 699 LQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITL 758

Query: 226 NVVSSNVIMNELCKNGK 242
           +  +   +M  L K  K
Sbjct: 759 HKSTYISLMEGLIKRRK 775


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 190/370 (51%), Gaps = 5/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S+ +++    +      V    K +   G   D  T +++I+ F + G V+  F  
Sbjct: 226 PDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWY 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F + ++    PN++ F+SLI GLC    I +A  +  ++   G +PNV T+  LI+GLC+
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCK 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  LF ++   +      +KPN  TY+ +I+G CKE  +++A+ L ++MK + L
Sbjct: 346 KGWTEKAFRLFLKLVRSDN-----YKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGL 400

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TYT LI G C A ++  A  L+  M  +G  PN+ + N I++ LCK G+   A +
Sbjct: 401 VPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYK 460

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL   ++  +  +  TY  L+  FC      +   +F  M  +G + D  +YN+LI  +C
Sbjct: 461 LLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFC 520

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + K+VEE+  L+ E    G+ PT  TY ++  G         A+K F +M+      D+ 
Sbjct: 521 RQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSI 580

Query: 369 TYRTFIDGLC 378
           TY   I GLC
Sbjct: 581 TYGALISGLC 590



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 189/368 (51%), Gaps = 11/368 (2%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D    +F  +    + PD  +Y +++  +C+MG++S        ++   +A +  T T +
Sbjct: 210 DYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLM 269

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I     +  +  A   F K    G  PN+I +++LINGLC+ G    A  + +EM     
Sbjct: 270 ISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG- 328

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHAN 206
                +KPN  T++ +IDGLCK+G+ +KA  LFL++ + +N  PNV TYT +I+G+C   
Sbjct: 329 -----WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE 383

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             N A+ LLI M +QG+ PN  +   +++  CK G    A  L+DLM +    PN FTYN
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            ++DG C  G+     +L       G   D  +Y ILI+ +C+  + ++AL++++ +   
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC----VRPQ 382
           G++P + TYN L       ++ E + KLF E  G  +     TY + I G C    +   
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563

Query: 383 VRFTYARR 390
           ++F +  R
Sbjct: 564 IKFFHKMR 571



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 10/376 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F+ L+  L K         + + +   G  P++YT++ LI+  CK G     F +
Sbjct: 296 PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL 355

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+T +I G C E ++  A  L  ++K  G  PN  TY  LI+G C
Sbjct: 356 FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHC 415

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A  L   M    G+ G  F PN  TY+ IIDGLCK+G   +A +L  +     
Sbjct: 416 KAGNFGRAYELMDLM----GKEG--FTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSG 469

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+ + VTYT LI  FC   D  +A  +   M   G+QP++ + NV++   C+  K++ + 
Sbjct: 470 LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESE 529

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L +  V   + P   TY +++ G+C  G I+   + F  M   GCK D  +Y  LI+G 
Sbjct: 530 KLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +++EA  LY  +   G+ P  VT  TL +     +Q + A  + + ++  +     
Sbjct: 590 CNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEY--CKQGDSATAMII-LERLEKKLWI 646

Query: 368 CTYRTFIDGLCVRPQV 383
            T  T I  LC   +V
Sbjct: 647 RTVNTLIRKLCSEKKV 662



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 169/332 (50%), Gaps = 7/332 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           FK+   +GL P+L  +S LIN  CK+G +   F +   ++R  + PNV T T+LI GLC 
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCK 345

Query: 94  ESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +    +A  LF KL ++   +PNV TY  +ING C+      A  L   M     E G+V
Sbjct: 346 KGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK----EQGLV 401

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PNT TY+ +IDG CK G   +A EL   M  E   PN+ TY ++I G C    + EA 
Sbjct: 402 --PNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY 459

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL   +  G+  + V+  ++++E C+      A  +   M +  ++P+  TYN L+  F
Sbjct: 460 KLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATF 519

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+   ++LF     +G      +Y  +I GYC++  +  A+  ++++   G KP  
Sbjct: 520 CRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +TY  L  GL    + + A +L+  M  N ++
Sbjct: 580 ITYGALISGLCNESKLDEACQLYETMIDNGLS 611



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 10/366 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V +   L+  L K    +    LF +L  S    P++YTY+ +IN +CK  +++   +
Sbjct: 331 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEM 390

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R+      PN  T+T LI G C       A  L   +   G  PN+ TYN +I+GLC
Sbjct: 391 LLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLC 450

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  L +               + VTY+I+I   C++    +A  +F +M    
Sbjct: 451 KKGRFPEAYKLLRRGLKSG------LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVG 504

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P++ TY  LI  FC      E++ L  E V  G+ P   +   ++   C++G + +A 
Sbjct: 505 LQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAI 564

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +    M     +P++ TY  L+ G C   K++   +L+ +M   G    + +   L   Y
Sbjct: 565 KFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEY 624

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +   A+ +   L     K  + T NTL   L   ++   A   F ++   D+  D 
Sbjct: 625 CKQGDSATAMIILERLE---KKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDR 681

Query: 368 CTYRTF 373
            T   F
Sbjct: 682 ITLAAF 687



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 144/329 (43%), Gaps = 12/329 (3%)

Query: 62  VSLGFV-----IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           ++LGFV     +F  +L     P+  ++  ++ G C   RI +       +   G   + 
Sbjct: 204 LALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDN 263

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            T   +I+     G    A   FK+       + +   PN + +S +I+GLCK G + +A
Sbjct: 264 ATCTLMISTFSEKGFVNRAFWYFKKW------VQMGLNPNLINFSSLINGLCKIGSIKQA 317

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVSSNVIMN 235
            E+  +M  +   PNV T+T+LI G C      +A  L +++V     +PNV +   ++N
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMIN 377

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             CK  K++ A  LL  M +  + PN  TY  L+DG C  G   R  EL   M   G   
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTP 437

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           + F+YN +I+G CK     EA  L       G+    VTY  L          ++AL +F
Sbjct: 438 NIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIF 497

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             M    +  D  TY   I   C + +V 
Sbjct: 498 SRMFKVGLQPDMHTYNVLIATFCRQKKVE 526



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 44/312 (14%)

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           ++      G    A+N+  EM N     G+V K   + +  +ID     GFVD A+++F 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNH----GLVLKARILNF--VIDVALALGFVDYAEKVFD 217

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-------------------- 221
           +M    + P+  +Y  ++ G+C     ++    L +M+++                    
Sbjct: 218 EMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG 277

Query: 222 ---------------GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
                          G+ PN+++ + ++N LCK G +  A  +L+ MV+   +PN +T+ 
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 267 TLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            L+DG C  G   +   LF+ +  S   K + ++Y  +INGYCK +++  A  L   +  
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           +G+ P   TY  L  G  +     RA +L   M       +  TY   IDGLC + +   
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE 457

Query: 386 TYA--RRKGNSG 395
            Y   RR   SG
Sbjct: 458 AYKLLRRGLKSG 469



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 91/195 (46%)

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +NL+        ++  F       EA  ++IEM + G+       N +++     G +D 
Sbjct: 152 DNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDY 211

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A ++ D M+   V P++ +Y  ++ G+C  G+I+ V      M   G   D+ +  ++I+
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            + +   V  A   + +    G+ P ++ +++L +GL +I   ++A ++  EM       
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 366 DTCTYRTFIDGLCVR 380
           +  T+   IDGLC +
Sbjct: 332 NVYTHTALIDGLCKK 346


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K +++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 90  HKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 149

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  I +    P+VV++ +L+ G      + E   L + ++A G +P+V TY+ LIN
Sbjct: 150 APLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLIN 209

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 210 GLCKESXMDDANELFDEMLVK----GLV--PNXVTFTTLIDGHCKNGRVDLAMEIYKQML 263

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+++TY +L++G C   D N+A GL+ EM  +G++P+  +   +++  CK G +D
Sbjct: 264 SQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLD 323

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 324 AAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMII 383

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P VVTYN L +G
Sbjct: 384 NEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A  +F  +  +G  P+V+
Sbjct: 108 KLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVV 167

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L K     +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 168 SYNTLMNGYIRLGDLDEGFRL-KSAMRASG-----VQPDVYTYSVLINGLCKESXMDDAN 221

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 222 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGL 281

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G ++ A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 282 CKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 341

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 342 VAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 401

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N       TY   ++G
Sbjct: 402 MQRNGHVPXVVTYNVLMNG 420



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA  +F  +T          +P+ V+Y+ +++G  + 
Sbjct: 126 GYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWG------LRPSVVSYNTLMNGYIRL 179

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 180 GDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTF 239

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G +N+   L   M  
Sbjct: 240 TTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXX 299

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 300 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXD 359

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 360 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 392



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A  +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 137 LMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASG 196

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C    ++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 197 VQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAM 256

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +     +A  L  EM    +  D  TY T IDG 
Sbjct: 257 EIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGC 316

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 317 CKEGDLDAAFEHRK 330



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 19/282 (6%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN---------GNGEIGVVF----------KPNTV 158
           T+   ++  C T H +    +F E  +         G G    VF          + +  
Sbjct: 3   TFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIY 62

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            +S +I    + GF+  A E +   +   L     T   ++        +    G   E+
Sbjct: 63  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 122

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           ++ G   ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G +
Sbjct: 123 LECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 182

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    L  +M + G + D ++Y++LING CK   +++A  L++E+  KG+ P  VT+ TL
Sbjct: 183 DEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTL 242

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             G  +  + + A++++ +M    +  D  TY T + GLC +
Sbjct: 243 IDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKK 284



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C    + + +N LM  FC  G I     +F ++   G +    SYN L+NGY +  +
Sbjct: 122 ILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD 181

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G++P V TY+ L +GL +    + A +LF EM    +  +  T+ T
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241

Query: 373 FIDGLCVRPQV 383
            IDG C   +V
Sbjct: 242 LIDGHCKNGRV 252


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 191/380 (50%), Gaps = 10/380 (2%)

Query: 2   RHMHPSPPP-VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           R  HP+  P   S+  ++  L  ++     ++L + + + G+  D+ TY  LI   C   
Sbjct: 113 REAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDAS 172

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     +   +  S   PNVV ++ L++G C   R  +   +F  +   G +P+VI + 
Sbjct: 173 ELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+ LC+ G T  A  + K+M    G      +PN VTY+++I+ LCKEG V +A  L 
Sbjct: 233 GLIDDLCKEGKTGKAAKV-KDMMVQRG-----LEPNVVTYNVLINSLCKEGSVREALTLR 286

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELC 238
            +M  + + P+VVTY +LI G     + +EA   L EM+  D  V+P+VV+ N +++ LC
Sbjct: 287 KEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLC 346

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G+M  A ++ ++M +     N  TYN L+ GF    K+     L   +   G + D F
Sbjct: 347 KIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSF 406

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y+ILING+ K  EV+ A      +  +GIK  +  Y  L   + +    ERA+ LF EM
Sbjct: 407 TYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM 466

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             N    D   Y T I G C
Sbjct: 467 DKN-CGLDAIAYSTMIHGAC 485



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 38/400 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ LL    ++  +  V  +F+ ++  G+ PD+  ++ LI+  CK G+      +
Sbjct: 191 PNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNVVT+  LI  LC E  + EA  L  ++   G  P+V+TYNTLI GL  
Sbjct: 251 KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSG 310

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A++  +EM  G+     V +P+ VT++ +I GLCK G + +A ++   M     
Sbjct: 311 VLEMDEAMSFLEEMIQGD----TVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+VTY  LI GF   +    A  L+ E+   G++P+  + ++++N   K  ++D A +
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426

Query: 249 LLDLMVQCDVRP----------------------------------NAFTYNTLMDGFCL 274
            L  M Q  ++                                   +A  Y+T++ G C 
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACK 486

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           +G +  VK+L   M   G   D  +Y++LIN Y K  ++EEA  +  ++   G  P V  
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +++L  G     Q ++ LKL  EM+  +VA D     T I
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 154/289 (53%), Gaps = 16/289 (5%)

Query: 97  IVEAAALFTKLKAFGCEPNV---ITYNTLINGLCRTG--HTIVALNLFKEMTNGNGEIGV 151
           + EA +L + L      P+V   ++YNT++  LCR G  H   A +L  +M+    E   
Sbjct: 67  VTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSR---EAHP 117

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             +PN V+Y+ ++ GLC      +A  L   M+   +  +VVTY +LI G C A++ + A
Sbjct: 118 AARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAA 177

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             LL EM   GVQPNVV  + ++   C++G+  +  ++ + M +  ++P+   +  L+D 
Sbjct: 178 LELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDD 237

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  GK  +  ++   M   G + +  +YN+LIN  CK   V EAL+L  E+  KG+ P 
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAA-DTCTYRTFIDGLC 378
           VVTYNTL  GL  + + + A+    EM QG+ V   D  T+ + I GLC
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLC 346



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 5/206 (2%)

Query: 191 NVVTYTSLIHGFCH--ANDWNEAKGLLIEMVDQG---VQPNVVSSNVIMNELCKNGKMDN 245
           + V+Y +++   C    +   +A+ LL++M  +     +PN VS   +M  LC + +   
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M    VR +  TY TL+ G C   +++   EL   M   G + +   Y+ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYC++   ++   ++ ++  +GIKP V+ +  L   L +  +  +A K+   M    +  
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 366 DTCTYRTFIDGLCVRPQVRFTYARRK 391
           +  TY   I+ LC    VR     RK
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRK 287


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 183/380 (48%), Gaps = 11/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ +LG L      +    LF+ +   GL  D+YTY+I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PNVVT+T+LI       ++  A  LF  + + GC PN++TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 129 TGHTIVALNLFKEMTNGNG--EIGVVFK---------PNTVTYSIIIDGLCKEGFVDKAK 177
            G    A  +F+ M       ++ + FK         PN V Y  ++DG CK   V++A+
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEAR 660

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +L   M  E   PN + Y +LI G C     +EA+ +  EM + G    + + + +++  
Sbjct: 661 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K  + D AS++L  M++    PN   Y  ++DG C  GK +   +L   ME  GC+ + 
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 780

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G+ +  ++E  L L   +  KG+ P  VTY  L     +    + A  L  E
Sbjct: 781 VTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 840

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M+          YR  I+G 
Sbjct: 841 MKQTHWPTHAAGYRKVIEGF 860



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 186/385 (48%), Gaps = 26/385 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VSSF     CL     Y+   S+ + +   G  PD  TYS ++   C   ++ L F++F 
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFE 507

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R     +V T+T ++   C    I +A   F +++  GC PNV+TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM------- 183
               A  LF+ M +     G +  PN VTYS +IDG CK G ++KA ++F +M       
Sbjct: 568 KVSYANELFETMLSE----GCL--PNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVP 621

Query: 184 -------KYENLN---PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                  +Y++ N   PNVV Y +L+ GFC  +   EA+ LL  M  +G +PN +  + +
Sbjct: 622 DVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDAL 681

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCK GK+D A  +   M +       +TY++L+D +    + +   ++   M    C
Sbjct: 682 IDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 741

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +   Y  +I+G CK  + +EA  L   +  KG +P VVTY  +  G   I + E  L+
Sbjct: 742 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLE 801

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L   M    VA +  TYR  ID  C
Sbjct: 802 LLERMGSKGVAPNYVTYRVLIDHCC 826



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 198/436 (45%), Gaps = 65/436 (14%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR     P  V+   +L GCL K K       +   +   G +P    ++ L++ +C  G
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALF 104
             S  + +  ++++    P  V +  LI  +C                A S ++    + 
Sbjct: 387 DHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL 446

Query: 105 TKL----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLF 139
            K+                KAF         G  P+  TY+ ++  LC      +A  LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLF 506

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           +EM  G    G+V   +  TY+I++D  CK G +++A++ F +M+     PNVVTYT+LI
Sbjct: 507 EEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DV 258
           H +  A   + A  L   M+ +G  PN+V+ + +++  CK G+M+ A ++ + M    DV
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDV 620

Query: 259 ----------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
                           RPN   Y  L+DGFC   ++   ++L  +M   GC+ +   Y+ 
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDA 680

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G CK  +++EA  +  E+   G   T+ TY++L    F++++ + A K+  +M  N 
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 363 VAADTCTYRTFIDGLC 378
            A +   Y   IDGLC
Sbjct: 741 CAPNVVIYTEMIDGLC 756



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 191/428 (44%), Gaps = 72/428 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K K       LF+ + S G  P++ TYS LI+  CK GQ+     I
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQI 610

Query: 69  FGRILRS-----------------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           F R+  S                    PNVV + +L+ G C   R+ EA  L   +   G
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEG 670

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFK-------- 154
           CEPN I Y+ LI+GLC+ G    A  +  EM+           +  I   FK        
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730

Query: 155 ------------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                       PN V Y+ +IDGLCK G  D+A +L   M+ +   PNVVTYT++I GF
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                      LL  M  +GV PN V+  V+++  CKNG +D A  LL+ M Q     +A
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMG----CKHDDFS-----YNILINGYCKNKEV 313
             Y  +++GF         KE    +ES+G       DD +     Y +L++   K + +
Sbjct: 851 AGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRL 899

Query: 314 EEALSLYNELPFKGIKPTVV----TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           E AL L  E+       T+V    TYN+L   L    + ++A +LF EM    V  +  T
Sbjct: 900 EMALRLLEEVA--TFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQT 957

Query: 370 YRTFIDGL 377
           + + I GL
Sbjct: 958 FCSLIKGL 965



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 177/417 (42%), Gaps = 51/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++N L+    K    D+   + + ++   L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
                   F P+ V +T LI GLC  S   EA     +++A  C PNV+TY         
Sbjct: 293 MET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                     N+L++  C +G    A  L K+M           
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG------H 403

Query: 154 KPNTVTYSIIIDGLCKEG------FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            P  V Y+I+I  +C +        ++ A++ + +M    +  N +  +S     C A  
Sbjct: 404 TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A  ++ EM+ QG  P+  + + ++  LC   KM+ A  L + M +  +  + +TY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++D FC  G I + ++ F  M  +GC  +  +Y  LI+ Y K K+V  A  L+  +  +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY-RTFIDGLCVRPQV 383
             P +VTY+ L  G  +  Q E+A ++F  M G+    D   Y + + D    RP V
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNV 640



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L+  +C+ G  S+     GR+    F P+  T+  LI+       +  A+ +  ++   
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLA 264

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
               +  T       LC+ G    AL L  E  N        F P+TV Y+ +I GLC+ 
Sbjct: 265 NLRMDGFTLRCYAYSLCKVGKWREALTLM-ETEN--------FVPDTVFYTKLISGLCEA 315

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              ++A +   +M+  +  PNVVTY++L+ G  +       K +L  M+ +G  P+    
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC-----LTGKINRVKE-L 284
           N +++  C +G    A +LL  MV+C   P    YN L+   C     L+  +  + E  
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKA 435

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M + G   +  + +      C   + E+A S+  E+  +G  P   TY+ +   L  
Sbjct: 436 YSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCN 495

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + E A  LF EM+   + AD  TY   +D  C
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 10/291 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H  P  + +++ L+    K K  D    +  ++      P++  Y+ +I+  CK+G+   
Sbjct: 704 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 763

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +      PNVVT+T++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 764 AYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             C+ G   VA NL +EM   +      +  +   Y  +I+G  KE F++    L  ++ 
Sbjct: 824 HCCKNGALDVAHNLLEEMKQTH------WPTHAAGYRKVIEGFNKE-FIESLG-LLDEIG 875

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS--NVIMNELCKNGK 242
            ++  P +  Y  L+     A     A  LL E+          SS  N ++  LC   K
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +D A RL   M +  V P   T+ +L+ G     KI+    L   +  M C
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVC 986



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 3/235 (1%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +K  +  Y+ ++D + ++      +EL  Q++ ++          L+  +C +  ++ A 
Sbjct: 161 YKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIAL 220

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  + D   +P+  + N ++    K   +D+AS +   M   ++R + FT        
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSL 280

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K+ + +E    ME+     D   Y  LI+G C+    EEA+   N +      P V
Sbjct: 281 C---KVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           VTY+TL  G    +Q  R  ++   M           + + +   C      + Y
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 208/410 (50%), Gaps = 41/410 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F+ L+    K ++  TV+ L + + S+GL P++YTY+I I    + G++   + I
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI 286

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+VVT+T LI  LC   ++ +A  LFTK+K+   +P+ +TY TL++    
Sbjct: 287 MKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH      ++ EM   +G     + P+ VT++I+++ LCK G +++A +L   M+ + +
Sbjct: 347 CGHLDKVEKIWTEM-EADG-----YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLL---------------IEMVD------------- 220
            PN+ TY +LI G   AN  ++A  L                I ++D             
Sbjct: 401 LPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALE 460

Query: 221 -------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                  +G+ PN+V+ N  +  L + G++  A  + + +    + P++ TYN +M  + 
Sbjct: 461 TFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++   +L   M  + C+ D    N LI+   K   VEEA  ++  +    + PTVV
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVV 580

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           TYN L  GL +  Q ++A++LF  M G+  + +T T+ T +D LC   +V
Sbjct: 581 TYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L   +  D  + LF ++ S    PD  TY  L++ F   G +     I
Sbjct: 297 PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKI 356

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +    +AP+VVTFT L+  LC   RI EA  L   ++  G  PN+ TYNTLI+GL R
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+LF  M +    +GV  +P   TY ++ID   K G   KA E F +MK   +
Sbjct: 417 ANRLDDALDLFSNMES----LGV--EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+V   + ++         EAK +  E+   G+ P+ V+ N++M    K G++D A +
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M +    P+    N+L+D     G++    ++F  ME M       +YNIL+ G  
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLG 590

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++++A+ L+  +   G  P  +T+NTL   L +  + + ALK+F +M   +   D  
Sbjct: 591 KEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVL 650

Query: 369 TYRTFIDGLCVRPQVR 384
           T+ T I G   + Q++
Sbjct: 651 TFNTIIHGFIKQNQIK 666



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 175/340 (51%), Gaps = 8/340 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           S  +++   G   + Y+Y+ LI+   + G       ++ R++     P++ TF++L+   
Sbjct: 180 SALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVAS 239

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIG 150
                I     L  ++++ G  PN+ TY   I  L R G    A  + K M + G G   
Sbjct: 240 GKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCG--- 296

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ VTY+++ID LC    +D A  LF +MK  +  P+ VTY +L+  F      ++
Sbjct: 297 ----PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK 352

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
            + +  EM   G  P+VV+  +++N LCK G+++ A  LLD M +  V PN  TYNTL+ 
Sbjct: 353 VEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLIS 412

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G     +++   +LF +MES+G +   ++Y +LI+ + K+    +AL  + ++  +GI P
Sbjct: 413 GLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V  N   + L E+ +   A  +F E++ + +A D+ TY
Sbjct: 473 NIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 9/339 (2%)

Query: 52   LINCFCKMGQVSLGFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            +I   CK  + S+   +F +  +     P +  +  LI G      +  A  LF ++K+ 
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 111  GCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCK 169
            GC P+  TYN+LI+   ++G      +L+ EM T G        KPNT+TY+++I  L K
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG-------CKPNTITYNMVISNLVK 872

Query: 170  EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
               +DKA +L+  +   + +P   T+  LI G   +   ++A  +   MV  G +PN   
Sbjct: 873  SNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAI 932

Query: 230  SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
             N+++N   K G +D A      MV+  +RP+  +Y  L+D  C+ G+++     F  ++
Sbjct: 933  YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992

Query: 290  SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
              G   D  +YN++ING  +++  EEALSL++E+  +GI P + TYN+L   L  +   E
Sbjct: 993  QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052

Query: 350  RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             A K++ E+Q   +  +  TY   I G  +       Y 
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYG 1091



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 192/441 (43%), Gaps = 77/441 (17%)

Query: 5    HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
            H   P   +FN LL CL KN   D  L +F ++ ++   PD+ T++ +I+ F K  Q+  
Sbjct: 608  HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 65   GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK------------------ 106
               +F + ++    P+ VT  +L+ G+    +I +A  +                     
Sbjct: 668  AIWLFHQ-MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 107  ---LKAFGCEPNVITYNTL---------------INGLCRTGHTIVALNLFKEMTNGNGE 148
               L   G E  ++    L               I  LC+   T VA N+F + T    E
Sbjct: 727  GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTK---E 783

Query: 149  IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            +GV  KP    Y+++IDG  +   V+ A  LF +MK     P+  TY SLI     +   
Sbjct: 784  LGV--KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 209  NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            NE   L  EM+ +G +PN ++ N++++ L K+ ++D A  L   +V  D  P   T+  L
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 269  MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY--------------------- 307
            +DG   +G+++   E+F  M   GC+ +   YNIL+NGY                     
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 308  --------------CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                          C    V++AL  + +L   G+ P +V YN + +GL   ++ E AL 
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 354  LFVEMQGNDVAADTCTYRTFI 374
            LF EMQ   +  D  TY + I
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLI 1042



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 178/355 (50%), Gaps = 7/355 (1%)

Query: 17   LLGCLAKNKHYDTVLSLF-KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
            ++  L K+K      ++F K    +G+ P L  Y++LI+ F ++  V + + +F  +  +
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 76   CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              AP+  T+ SLI       +I E   L+ ++   GC+PN ITYN +I+ L ++     A
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879

Query: 136  LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            ++L+  + +G+      F P   T+  +IDGL K G +D A E+F  M +    PN   Y
Sbjct: 880  MDLYYNLVSGD------FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933

Query: 196  TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
              L++G+      + A      MV +G++P++ S  ++++ LC  G++D+A    + + Q
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993

Query: 256  CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
              + P+   YN +++G   + +      LF  M++ G   D ++YN LI        +EE
Sbjct: 994  AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053

Query: 316  ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            A  +Y EL F G+KP V TYN L  G      +E A  ++ +M       +T T+
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 170/330 (51%), Gaps = 6/330 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P +  +N+L+    +  + +   +LF+ + S G  PD +TY+ LI+   K G+++  F +
Sbjct: 788  PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  +L     PN +T+  +I  L   +R+ +A  L+  L +    P   T+  LI+GL +
Sbjct: 848  YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +G     L+   EM +G    G   +PN+  Y+I+++G  K G VD A E F +M  E +
Sbjct: 908  SGR----LDDAHEMFDGMVHYGC--RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P++ +YT L+   C A   ++A     ++   G+ P++V+ N+++N L ++ + + A  
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L   M    + P+ +TYN+L+    + G I    +++  ++ +G K + F+YN LI GY 
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +   E A  +Y ++   G  P   T+  L
Sbjct: 1082 LSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 176/373 (47%), Gaps = 15/373 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV----- 62
           P   SS + +LG L  +   D + +LF    S+G  P++   +   N   ++ +V     
Sbjct: 85  PRKGSSSDEVLGVL--HSISDPIHALF-YFKSVGELPNVVHTTETCNHMLEILRVHRRVE 141

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            + FV F  + R     NV T+  + K L     + +A +   K++  G   N  +YN L
Sbjct: 142 DMAFV-FDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGL 200

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+ L ++G    AL +++ M +         KP+  T+S ++    K   +     L  +
Sbjct: 201 IHFLLQSGFCKEALEVYRRMVSEG------LKPSLKTFSALMVASGKRRNIKTVMGLLEE 254

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+   L PN+ TYT  I         +EA  ++  M D G  P+VV+  V+++ LC   K
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK 314

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A  L   M     +P+  TY TL+D F   G +++V++++  ME+ G   D  ++ I
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+N  CK   + EA  L + +  +G+ P + TYNTL  GL    + + AL LF  M+   
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 363 VAADTCTYRTFID 375
           V     TY   ID
Sbjct: 435 VEPTAYTYILLID 447



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 105/227 (46%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           + + N  TY II   L   G + +A     +M+      N  +Y  LIH    +    EA
Sbjct: 154 IIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEA 213

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +   MV +G++P++ + + +M    K   +     LL+ M    +RPN +TY   +  
Sbjct: 214 LEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRV 273

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               GKI+    +   M+  GC  D  +Y +LI+  C  +++++A+ L+ ++     KP 
Sbjct: 274 LGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPD 333

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VTY TL     +    ++  K++ EM+ +  A D  T+   ++ LC
Sbjct: 334 KVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 60/116 (51%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++N+++  L +++  +  LSLF  + + G+ PDLYTY+ LI     +G +     I
Sbjct: 998  PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            +  +      PNV T+ +LI+G         A  ++ K+   GC+PN  T+  L N
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 69/161 (42%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M  Q ++ NV +  +I   L   G +  A   L+ M +     NA++YN L+     +G 
Sbjct: 150 MQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGF 209

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                E++  M S G K    +++ L+    K + ++  + L  E+   G++P + TY  
Sbjct: 210 CKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               L    + + A ++   M  +    D  TY   ID LC
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC 310


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 194/372 (52%), Gaps = 6/372 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  +N L+    +    D    +   +   G+ P++ TY+  I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  ++R+    +VVT ++L+ GLC + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLA 320

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K+       +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+ N VTYT LI   C A++ +EA+ +L+EM ++ + PNVV+ + ++N   K G +D A+
Sbjct: 375 LSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
               +M +  + PN  TY TL+DGF      +   E++  M   G + + F  + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +N ++EEA++L+ +    G+    V Y TL  GLF+      A K   E+   ++  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 368 CTYRTFIDGLCV 379
             Y  FI+ LC+
Sbjct: 555 VVYNVFINCLCI 566



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 180/395 (45%), Gaps = 41/395 (10%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L +N   +  ++LFK  +  GL  D   Y+ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+ V +   I  LC   +  EA ++ T+++  G +P+  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT-- 194
            L  EM   +       KPN +TY+ ++ GL   G V+KAK L  +M     +P+ +T  
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 195 ---------------------------------YTSLIHGFCHANDWNEAKGLLIEMVDQ 221
                                            Y +L+   C+     +A  +L EM+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P+ ++ N ++   CK+  +DNA      M+  ++ PN  T+NTL+ G    G+I   
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             + + ME  G + ++ +Y+IL+ G+ K     EA+ LY E+  KG  P V TYN L   
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             +     +A +LF +MQ   V   +CTY   + G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 182/401 (45%), Gaps = 41/401 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + + L+  L ++  +    +LF+ ++ +G  P+  TY  LI+   K G+      + G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++      ++VT+T+L+  L  + +  E         +     N +TY  LI+ LC+  
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAH 393

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  +  EM   +        PN VT+S +I+G  K G +DKA E    MK   +NP
Sbjct: 394 NVDEAEQVLLEMEEKS------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA---- 246
           NVVTY +LI GF      + A  +  +M+ +GV+ N    + ++N L +NGK++ A    
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 247 ---------------SRLLDLMVQCDVRPNAF----------------TYNTLMDGFCLT 275
                          + L+D + +    P AF                 YN  ++  C+ 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCIL 567

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK    K +   M +MG K D  +YN +I  +C+  E  +AL L +E+    IKP ++TY
Sbjct: 568 GKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           NTL  GLF     E+A  L  EM     +  + T+R  +  
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 179/384 (46%), Gaps = 7/384 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N LL  L +N   D   +L  R   I    D+  ++ LI  +C++G       +  R+
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRM 195

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  +VV + +L+ G C   ++  A  +   +K  G +PNV TY   I   CRT   
Sbjct: 196 TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L++ M       GV+   + VT S ++ GLC++G   +A  LF +M      PN 
Sbjct: 256 EEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNH 309

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI     A    E   LL EMV +GV  ++V+   +M+ L K GK D     L  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            +  ++  N  TY  L+D  C    ++  +++ + ME      +  +++ +ING+ K   
Sbjct: 370 ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++A      +  +GI P VVTY TL  G F+ +  + AL+++ +M    V  +     +
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS 489

Query: 373 FIDGLCVRPQVRFTYARRKGNSGN 396
            ++GL    ++    A  K  SG+
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGS 513



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 29/405 (7%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L K    D V    +   S  L  +  TY++LI+  CK   V     +   +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +PNVVTF+S+I G      + +A      +K  G  PNV+TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 133 IVALNLFKEM---------------TNG---NGEI-----------GVVFKPNTVTYSII 163
             AL ++ +M                NG   NG+I           G     + V Y+ +
Sbjct: 466 DAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDGL K G +  A +   ++   N+ P+ V Y   I+  C    + EAK +L EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGL 585

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P+  + N ++   C+ G+   A +LL  M    ++PN  TYNTL+ G   TG + + K 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M S G      ++  ++    +++ ++  L ++  +   G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
                 +A  +  EM G+ +A DT T+   I G C    +   +A
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 44/383 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +N+ + CL     +    S+   + ++GL PD  TY+ +I   C+ G+ +    +
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT---------- 118
              +  S   PN++T+ +L+ GL     + +A  L  ++ + G  P+ +T          
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 119 -------------------------YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                    YNTL+  LC  G T  A  + +EM      +G   
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGI 725

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+T+T++ +I G CK   +D A   + QM ++N++PN+ T+ +L+ G        EA  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +LIEM   G++PN ++ ++++    K      A RL   MV     P   TYN L+  F 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G + + KELF  M+  G      +Y+IL++G+ + +   E      ++  KG  P+  
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 334 TYNTLFHGLFE---IRQAERALK 353
           T + +     +     QA+R LK
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 16/314 (5%)

Query: 71  RILRSCFA------PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           R+LR   A      P  V +  L+  L   S    A A+  ++   G   + +T NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLCR G    A  L      G G    +   + + ++ +I G C+ G    A  +  +M 
Sbjct: 144 GLCRNGQVDAAAALADR---GGG----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L  +VV Y +L+ GFC A   + A+G+L  M + GV PNV +    +   C+   ++
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + MV+  V  +  T + L+ G C  G+ +    LF  M+ +G   +  +Y  LI
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLI 316

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K    +E LSL  E+  +G+   +VTY  L   L +  + +           ++++
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 365 ADTCTYRTFIDGLC 378
            +  TY   ID LC
Sbjct: 377 LNGVTYTVLIDALC 390



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 138/320 (43%), Gaps = 6/320 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M    P + ++N L+  L      +    L   + S G  P   T+  ++    +  ++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           +   I   ++ +    ++  + +L++ LC      +A  +  ++   G  P+ IT+N LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C++ H   A   + +M + N        PN  T++ ++ GL   G + +A  + ++M
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQN------ISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           +   L PN +TY  L+ G    ++  EA  L  EMV +G  P V + N ++++  K G M
Sbjct: 791 EKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A  L   M +  V P + TY+ L+ G+        VK+    M+  G      + + +
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910

Query: 304 INGYCKNKEVEEALSLYNEL 323
              + K     +A  L   L
Sbjct: 911 CRAFSKPGMTWQAQRLLKNL 930


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 197/380 (51%), Gaps = 21/380 (5%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+ ++   P   S+N++L  L          ++F  + S G+ P +YT+ +++   C + 
Sbjct: 163 MKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVN 222

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + +    PN V + +LI  L    R+ EA  L  ++   GC P+V T+N
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFN 282

Query: 121 TLINGLCR-----TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
            +I GLCR      G  +V   LF+            F PN +TY ++++GLC+ G VD+
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRG-----------FTPNDITYGVLMNGLCRVGKVDE 331

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIM 234
           A+ L  ++      PN V +T LI+G+  +   +EA   L + M+  G +P+V + N ++
Sbjct: 332 AQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLI 387

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCK G M +A  +++ M      PN  TY TL+DGFC   ++     +   M + G +
Sbjct: 388 HGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFE 447

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   YN+L+   CKN +V +AL +  E+  KG KP + T+NTL  GL ++ + E AL L
Sbjct: 448 LNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALAL 507

Query: 355 FVEMQGNDVAADTCTYRTFI 374
           + +M  + V A+T TY T I
Sbjct: 508 YRDMLLDGVIANTVTYNTLI 527



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 9/374 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    +  L+  L+K    +  L L + +  +G  PD+ T++ +I   C++ ++  
Sbjct: 237 HGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHE 296

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           G  +  R+L   F PN +T+  L+ GLC   ++ EA  L  K+      PN + +  LIN
Sbjct: 297 GAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILIN 352

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G  ++G    A     +    NG      +P+  T++ +I GLCK+G +  A ++   M 
Sbjct: 353 GYVKSGRLDEANAFLYDKMIKNG-----CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PN++TYT+L+ GFC  N   EA  +L EM  +G + N++  NV++  LCKNGK+ 
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +L  M     +P+ FT+NTL+ G C   +      L+  M   G   +  +YN LI
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + + +   ++EAL L N++ F+G     +TYN L     ++   E+AL LF EM   D+ 
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587

Query: 365 ADTCTYRTFIDGLC 378
               +    I+GLC
Sbjct: 588 PSNISCNLLINGLC 601



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 196/377 (51%), Gaps = 11/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN ++  L +         L  R+   G  P+  TY +L+N  C++G+V    V+
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLC 127
             ++      PN V FT LI G     R+ EA A L+ K+   GC P+V T+NTLI+GLC
Sbjct: 336 LNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+++  +M+  NG       PN +TY+ ++DG CK+  +++A  +  +M  + 
Sbjct: 392 KKGLMGSAVDMVNDMS-ANG-----CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N++ Y  L+   C      +A  +L EM D+G +P++ + N ++  LCK  + ++A 
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M+   V  N  TYNTL+  F   G I    +L   M   GC  D+ +YN LI  +
Sbjct: 506 ALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAF 565

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK    E+AL L++E+  K + P+ ++ N L +GL  + +   AL+L  +M    +A D 
Sbjct: 566 CKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDV 625

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY + I+GLC    +R
Sbjct: 626 VTYNSLINGLCKMGNIR 642



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  L K     + + +   +++ G  P+L TY+ L++ FCK  Q+     +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F  N++ +  L++ LC   ++ +A  +  ++   GC+P++ T+NTLI GLC+
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   NTVTY+ +I    + G + +A +L   M +   
Sbjct: 498 VDRKEDALALYRDMLLD----GVI--ANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGC 551

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI  FC      +A GL  EMV + + P+ +S N+++N LC+ GK+ NA  
Sbjct: 552 PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE 611

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+   + P+  TYN+L++G C  G I     LF  +++ G + D  +YN LI  +C
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +    ++A  L          P  VT+  L
Sbjct: 672 RAGMFDDAYLLLLRGVENAFIPNDVTWYIL 701



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 6/262 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  +N+LL  L KN      L +   ++  G  PD++T++ LI   CK+ +      ++ 
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L      N VT+ +LI        I EA  L   +   GC  + ITYN LI   C+ G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  AL LF EM   +        P+ ++ +++I+GLC+ G V  A EL   M +  L P
Sbjct: 570 ATEKALGLFDEMVRKD------LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAP 623

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTY SLI+G C   +  EA  L  ++  +G+QP+ ++ N ++   C+ G  D+A  LL
Sbjct: 624 DVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683

Query: 251 DLMVQCDVRPNAFTYNTLMDGF 272
              V+    PN  T+  L+  F
Sbjct: 684 LRGVENAFIPNDVTWYILVSNF 705



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 32/263 (12%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P   +Y++++D L        A  +F +M  + + P V T+  ++   C  N+ + A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M   G  PN V    +++ L K  +++ A +LL+ M      P+  T+N ++ G C
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF-------- 325
              +I+   +L   M   G   +D +Y +L+NG C+  +V+EA  L N++P         
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTI 349

Query: 326 ------------------------KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
                                    G +P V T+NTL HGL +      A+ +  +M  N
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 362 DVAADTCTYRTFIDGLCVRPQVR 384
               +  TY T +DG C + Q+ 
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLE 432



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%)

Query: 175 KAKELFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +A  + L MK      P   +Y  ++     AN  + A  +  EM+ +GV P V +  V+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           M  LC   ++DNA  LL  M +    PN+  Y TL+       ++N   +L   M  MGC
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
             D  ++N +I G C+   + E   L + + F+G  P  +TY  L +GL  + + + A
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA 332



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 12/139 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N+L+  L +       L L + +   GL PD+ TY+ LIN  CKMG +   F +
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNL 647

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      P+ +T+ +LI   C      +A  L  +       PN +T+  L++    
Sbjct: 648 FNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVS---- 703

Query: 129 TGHTIVALNLFKEMTNGNG 147
                   N  KE+   NG
Sbjct: 704 --------NFIKEIGKENG 714



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)

Query: 274 LTGKINRVKELFVSMESMGCKHDDF-SYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           L G+  R   + + M+ + C    F SYN++++          A +++ E+  KG+ PTV
Sbjct: 152 LPGQATR---MLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTV 208

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            T+  +   L  + + + A  L  +M  +    ++  Y+T I  L  R +V
Sbjct: 209 YTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRV 259


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 192/368 (52%), Gaps = 8/368 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +  +LL  LAK++  DTV  ++K++  +G+  +++ Y++L++  CK G V     +
Sbjct: 169 PHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKV 228

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +   C  P++ T+ +LI   C +    EA ++  +++  G  P++ TYN+LI G CR
Sbjct: 229 LSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCR 288

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF+++ +          PN VTY+ +IDG C+   +D+A  L   M  + L
Sbjct: 289 EGRMREAVQLFRDIKD--------VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGL 340

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+TY S++   C      +A  LL EM ++ ++P+ V+ N ++N  CK G M +A +
Sbjct: 341 YPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALK 400

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D MV   ++ + FTY  L+ GFC   +I++ KEL   M   G      +Y+ L++ YC
Sbjct: 401 VKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYC 460

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +  E  + L +EL  +G+   V  Y  L     +I + + A ++   M+   +  D+ 
Sbjct: 461 KQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSV 520

Query: 369 TYRTFIDG 376
            Y +   G
Sbjct: 521 VYTSLAYG 528



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 10/372 (2%)

Query: 9   PPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V+S   + L+     +K     + +F+ +   G  P L+  ++L+N   K       +
Sbjct: 132 PDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVW 191

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I+ ++++     N+  +  L+   C    + +A  + ++++     P++ TYNTLI+  
Sbjct: 192 KIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLY 251

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    AL++   M            P+  TY+ +I G C+EG + +A +LF  +K  
Sbjct: 252 CKKGMHYEALSVQDRMEMAG------ISPDIFTYNSLIYGFCREGRMREAVQLFRDIK-- 303

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           ++ PN VTYTSLI G+C  ND +EA  L   M ++G+ P V++ N I+ +LC+ G++ +A
Sbjct: 304 DVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDA 363

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           + LL+ M +  + P+  T NTL++ +C  G +    ++   M   G K D F+Y  LI+G
Sbjct: 364 NILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHG 423

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK KE+++A  L   +   G  P+  TY+ L     + +  E  +KL  E+    +  D
Sbjct: 424 FCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVD 483

Query: 367 TCTYRTFIDGLC 378
              YR  I   C
Sbjct: 484 VSVYRALIRRFC 495



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA  +F  ++  G  P++     L+N L +   T     ++K+M     ++GVV   N  
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMV----KLGVV--ANIH 207

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y++++   CK G V+KA+++  +M+ + + P++ TY +LI  +C      EA  +   M
Sbjct: 208 VYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRM 267

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGK 277
              G+ P++ + N ++   C+ G+M  A +L  D+    DV PN  TY +L+DG+C    
Sbjct: 268 EMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIK---DVTPNHVTYTSLIDGYCRVND 324

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   M   G      +YN ++   C+   + +A  L NE+  + I+P  VT NT
Sbjct: 325 LDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNT 384

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +   +I     ALK+  +M G  +  D  TY+  I G C   ++
Sbjct: 385 LINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 12/265 (4%)

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKEL 179
           +T H  +    FK+  +    +  + K         + +++ +I+ G  K     +A ++
Sbjct: 101 KTAHAFLENIAFKDFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSK--MTHEAIQV 158

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F  M+     P++   T L++        +    +  +MV  GV  N+   NV+++  CK
Sbjct: 159 FEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCK 218

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +G ++ A ++L  M    V P+ FTYNTL+  +C  G       +   ME  G   D F+
Sbjct: 219 SGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFT 278

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI G+C+   + EA+ L+ ++  K + P  VTY +L  G   +   + AL+L   M 
Sbjct: 279 YNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMS 336

Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
              +     TY + +  LC   ++R
Sbjct: 337 EKGLYPTVITYNSILRKLCEGGRLR 361



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 52/130 (40%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+    K K  D    L   +   G  P   TYS L++ +CK         +   +
Sbjct: 416 TYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDEL 475

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +R     +V  + +LI+  C   +I  A  +   +K  G   + + Y +L  G  + G  
Sbjct: 476 VRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKV 535

Query: 133 IVALNLFKEM 142
            V  ++  EM
Sbjct: 536 NVTSDILDEM 545


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 182/335 (54%), Gaps = 9/335 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+  L        V++LF+R     L+ PD+++++++I   C++GQV     +  R
Sbjct: 215 AYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVER 274

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTG 130
           +     +P+ VT   ++ GLC  + +     +  +L+  G C PNV+T+ ++I+G C+ G
Sbjct: 275 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ ++ +M            PNTVTY+++I+G  K G +  A E++ QM      P
Sbjct: 335 KLEDAMAVYNDMVASG------IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 388

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT++SLI G+C     ++A  +  +M    +QPNV + ++I++ LCK  + D A RLL
Sbjct: 389 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLL 448

Query: 251 -DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +L ++ D+ P AF YN ++D  C  GK++    +   ME  GC+ D ++Y ILI GYC 
Sbjct: 449 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCM 508

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              + EA+  ++E+   G  P  +T N     L +
Sbjct: 509 KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 543



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + +       L L +R+N  G  PD  T++I+++  C+  +VS G  +
Sbjct: 247 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 306

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             R+ R   C  PNVVTFTS+I G C   ++ +A A++  + A G  PN +TYN LING 
Sbjct: 307 LRRLQRDGVCM-PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 365

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A+ ++++MT       +   P+ VT+S +IDG C+ G +D A  ++  M   
Sbjct: 366 GKVGDLGSAVEVYQQMTR------LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 419

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDN 245
            + PNV T++ +IH  C  N  +EA  LL E+ +   + P     N +++ LCK GK+D 
Sbjct: 420 RIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 479

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +   M +   RP+ +TY  L+ G+C+  +I+     F  M   GC  D  + N  I+
Sbjct: 480 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 539



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 13/355 (3%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTS 86
           D   +L  + +  G   + Y Y+ L++     G+V     +F R ++   ++P+V +F  
Sbjct: 195 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNV 254

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +IKG+C   ++ +A  L  ++  FGC P+ +T+N +++GLCRT        + + +    
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                V  PN VT++ +I G CK G ++ A  ++  M    + PN VTY  LI+G+    
Sbjct: 315 -----VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVG 369

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D   A  +  +M      P+VV+ + +++  C+ G++D+A R+   M Q  ++PN +T++
Sbjct: 370 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 429

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHD----DFSYNILINGYCKNKEVEEALSLYNE 322
            ++   C   K NR  E    +  +  + D     F YN +I+  CK  +V+EA  +   
Sbjct: 430 IIIHSLC---KQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 486

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  KG +P   TY  L  G     +   A+  F EM     + D+ T   FI  L
Sbjct: 487 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL 541



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 4   MHPSP----PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCK 58
           +H SP    P   S   ++  L ++      L LF ++ +  G  PD    S L++    
Sbjct: 131 LHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTC 190

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVI 117
              +     +  +            +  L+  L    R+ +  ALF + ++     P+V 
Sbjct: 191 ANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVW 250

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++N +I G+CR G    AL L + M     E G    P+TVT++II+DGLC+   V +  
Sbjct: 251 SFNVVIKGVCRVGQVQKALELVERMN----EFGC--SPDTVTHNIIVDGLCRTNEVSRGH 304

Query: 178 ELFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           E+  +++ + +  PNVVT+TS+I G+C A    +A  +  +MV  G+ PN V+ NV++N 
Sbjct: 305 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 364

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
             K G + +A  +   M +    P+  T+++L+DG+C  G+++    ++  M     + +
Sbjct: 365 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 424

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            ++++I+I+  CK    +EA+ L NEL  +  I P    YN +   L +  + + A  + 
Sbjct: 425 VYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 484

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             M+      D  TY   I G C++ ++
Sbjct: 485 KGMEEKGCRPDKYTYTILIIGYCMKSRI 512


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 190/370 (51%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  ++  L   K       L +++   GL P++  YSILI  +   G++     +
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  AP++  + ++I  L    ++ EA+    +++  G +P+ +T+   I G  +
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A   F EM +          PN   Y+++I+G  K G + +A  +F ++    +
Sbjct: 556 TGKMTEAAKYFDEMLDHG------LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T ++ IHG        EA  +  E+ ++G+ P+V + + +++  CK G+++ A  
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    + PN F YN L+DG C +G I R ++LF  M   G + D  +Y+ +I+GYC
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ V EA SL++E+P KG++P    YN L HG  +    E+A+ LF EM     A  T 
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TL 788

Query: 369 TYRTFIDGLC 378
           ++ T IDG C
Sbjct: 789 SFNTLIDGYC 798



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 181/354 (51%), Gaps = 7/354 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LS+F+RL+++G+ PD+ T S  I+   K G+V     +F  +      P+V T++SLI 
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C +  + +A  L  ++   G  PN+  YN L++GLC++G    A  LF    +G  E 
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF----DGMPEK 712

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+  +P++VTYS +IDG CK   V +A  LF +M  + + P+   Y +L+HG C   D  
Sbjct: 713 GL--EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 770

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  L  EM+ +G     +S N +++  CK+ K+  AS+L   M+   + P+  TY T++
Sbjct: 771 KAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           D  C  GK+     LF  M+      D  +Y  L+ GY K  +  E  +L+ ++  KG+K
Sbjct: 830 DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 889

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           P  VTY  + +   +      A KL  E+ G  +      +   I  LC R  +
Sbjct: 890 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 943



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 42/403 (10%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V + +  +  L KN      L +F  L   GL PD++TYS LI+ FCK G+V   F +
Sbjct: 611  PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +     APN+  + +L+ GLC    I  A  LF  +   G EP+ +TY+T+I+G C+
Sbjct: 671  HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 730

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            + +   A +LF EM +     GV  +P++  Y+ ++ G CKEG ++KA  LF +M  +  
Sbjct: 731  SENVAEAFSLFHEMPSK----GV--QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 784

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                +++ +LI G+C +    EA  L  EM+ + + P+ V+   +++  CK GKM+ A+ 
Sbjct: 785  -ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY-------- 300
            L   M + ++  +  TY +LM G+   G+ + V  LF  M + G K D+ +Y        
Sbjct: 844  LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903

Query: 301  ---------------------------NILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                                       ++LI   CK +++ EA  L +E+   G+KP++ 
Sbjct: 904  KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963

Query: 334  TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              NTL     E  + + A ++F  ++   +  DT T    ++G
Sbjct: 964  ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 187/380 (49%), Gaps = 8/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +     I
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355

Query: 69  FGRILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              ++ SC  P N++T+  LI GLC   ++ +AA +   +   GC+PN  T+  LI G C
Sbjct: 356 -KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R  +   AL L  EM   N        P+ V+Y  +I+GLC    +  A +L  +M +  
Sbjct: 415 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNVV Y+ LI  +       EA+ LL  M   GV P++   N I++ L K GKM+ AS
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  +    ++P+A T+   + G+  TGK+    + F  M   G   ++  Y +LING+
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   + EALS++  L   G+ P V T +   HGL +  + + ALK+F E++   +  D 
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            TY + I G C + +V   +
Sbjct: 649 FTYSSLISGFCKQGEVEKAF 668



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 180/381 (47%), Gaps = 6/381 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++N+L+  L K    +    + K + ++G  P+  T+ +LI  +C+   +     
Sbjct: 365 PINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALE 424

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +    P+ V++ ++I GLC    +  A  L  K+   G +PNV+ Y+ LI    
Sbjct: 425 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYA 484

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L   M+      GV   P+   Y+ II  L K G +++A    L+++   
Sbjct: 485 SEGRIEEARRLLDGMSCS----GVA--PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 538

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VT+ + I G+       EA     EM+D G+ PN     V++N   K G +  A 
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 598

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   +    V P+  T +  + G    G++    ++F  ++  G   D F+Y+ LI+G+
Sbjct: 599 SIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 658

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  EVE+A  L++E+  KGI P +  YN L  GL +    +RA KLF  M    +  D+
Sbjct: 659 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 718

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TY T IDG C    V   ++
Sbjct: 719 VTYSTMIDGYCKSENVAEAFS 739



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 182/376 (48%), Gaps = 8/376 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R+   S P V  F+IL+    +    D   ++F    +  +   L   + L+    K G 
Sbjct: 151 RNYGGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGM 208

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           + L + ++  +L +    +V T+T L+  LC    +  A  +  ++   G  PN   Y+ 
Sbjct: 209 MELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL 268

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I G+C+ G    A+ L + M    GE G+V  PNT TY+II  GLC+   +++AK  F 
Sbjct: 269 VIEGMCQVGDIDEAVELKRSM----GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFE 322

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M+   L P+    ++LI GF    D +E   +   MV  G+  N+++ NV+++ LCK G
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           KM+ A+ +L  MV    +PN+ T+  L++G+C    + R  EL   ME         SY 
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG 442

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +ING C  K++  A  L  ++ F G+KP VV Y+ L        + E A +L   M  +
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502

Query: 362 DVAADTCTYRTFIDGL 377
            VA D   Y   I  L
Sbjct: 503 GVAPDIFCYNAIISCL 518



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 22/381 (5%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P SS +IL          D+VL  F+  N  G  P    + ILI+ + +MG +     +F
Sbjct: 136 PYSSSSIL----------DSVLFWFR--NYGGSSP--VVFDILIDSYKRMGMLDEAANVF 181

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                     +++   SL+K L     +     ++  +       +V TY  L+  LC+T
Sbjct: 182 FVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKT 241

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    A  +  EM            PN   YS++I+G+C+ G +D+A EL   M  + L 
Sbjct: 242 GDLRGAKRVLIEMDEKG------LNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLV 295

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PN  TYT +  G C A   NEAK    EM   G++P+  + + +++   + G +D   R+
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 355

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D+MV C +  N  TYN L+ G C  GK+ +  E+   M ++GCK +  ++ +LI GYC+
Sbjct: 356 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCR 415

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +  AL L +E+  + + P+ V+Y  + +GL   +    A KL  +M  + +  +   
Sbjct: 416 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 475

Query: 370 YRTFIDGLCVRPQVRFTYARR 390
           Y   I  +    + R   ARR
Sbjct: 476 YSILI--MAYASEGRIEEARR 494



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 6/242 (2%)

Query: 13   SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
            SFN L+    K+        LF+ + +  + PD  TY+ +I+  CK G++    ++F  +
Sbjct: 789  SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848

Query: 73   LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                   + VT+TSL+ G     +  E  ALF K+ A G +P+ +TY  +I   C+  + 
Sbjct: 849  QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 908

Query: 133  IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            + A  L  E+      +G         + ++I  LCK   + +A +L  +M    L P++
Sbjct: 909  VEAFKLRDEV------VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 962

Query: 193  VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
                +L+  F  A   +EA  +   +   G+ P+  +   ++N    +   ++A  L+  
Sbjct: 963  AACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQ 1022

Query: 253  MV 254
            +V
Sbjct: 1023 LV 1024


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 173/326 (53%), Gaps = 9/326 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SFN ++  + +    D   +L +R++  G+ PD+YTY  LI   C++G++     +F 
Sbjct: 151 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 210

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      PN V FT LI   C +        L  +++  G  P+ +TYN ++NGLCR  
Sbjct: 211 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +  EM +         +P+TVTY+ +IDG CKE  +D A E+   M  E +  
Sbjct: 271 DLKSASGIVVEMRSAG------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 324

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTYT+LI G   A    +A+ +L EM++ G++P+  +  ++++  C+ G +    RLL
Sbjct: 325 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 384

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M     +P   TYN +M+GFC  G++     L  +M ++G   DD +YNIL++G+CK+
Sbjct: 385 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 444

Query: 311 ---KEVEEALSLYNELPFKGIKPTVV 333
               ++EE  S    +P  G+  ++V
Sbjct: 445 GKVTDIEELKSAKGTVPDLGVYTSIV 470



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           + + +L   GL P+   +++L+    ++G+++    +F  +        VV+F ++I G+
Sbjct: 102 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +  A  L  ++   G  P+V TY  LI GLCR G    A  +F++M  G G    
Sbjct: 162 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC-GRG---- 216

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             KPN V ++I+ID  CK+G  +   EL  +M+   + P+ VTY ++++G C A D   A
Sbjct: 217 -MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            G+++EM   G++P+ V+   +++  CK  ++D A  +   MV   V  +  TY  L+ G
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               G+    + +   M   G + D+ +Y ++I+ +C+  +V+  L L  E+  KG KP 
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           VVTYN + +G  ++ Q + A  L   M    V+ D  TY   +DG C   +V
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    FN+L+  L +     +  ++F  + S G+   + +++ +I+  C+ G +     
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R+  +   P+V T+ +LI+GLC   RI +A  +F K+   G +PN + +  LI+  C
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L L +EM     E GV  +P+ VTY+ I++GLC+   +  A  + ++M+   
Sbjct: 233 KKGDAETMLELHREMR----ERGV--RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VTYT+LI G+C   + + A  +   MV +GV  + V+   +++ L K G+  +A 
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  M++  + P+  TY  ++D FC  G +     L   M++ G K    +YN+++NG+
Sbjct: 347 RVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGF 406

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           CK  +++ A  L N +   G+ P  +TYN L  G
Sbjct: 407 CKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 440



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 6/286 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA A + +L   G  P    +N L+  L R G    A N+F EM +         +   V
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG------VRRTVV 152

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +++ +I G+C+ G +D A+ L  +M    + P+V TY +LI G C      +A+G+  +M
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G++PN V   ++++  CK G  +    L   M +  VRP+A TYN +++G C    +
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                + V M S G + D  +Y  LI+GYCK +E++ A+ +   +  +G+    VTY  L
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             GL +  ++  A ++  EM    +  D  TY   ID  C +  V+
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 378



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 9/227 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L + +   +   +   + S GL PD  TY+ LI+ +CK  ++ +   I
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      + VT+T+LI GL    R  +A  +  ++   G EP+  TY  +I+  CR
Sbjct: 314 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L L KEM N         KP  VTY++I++G CK G +  A  L   M    +
Sbjct: 374 KGDVKTGLRLLKEMQNKG------RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 427

Query: 189 NPNVVTYTSLIHGFC---HANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +P+ +TY  L+ G C      D  E K     + D GV  ++V   V
Sbjct: 428 SPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIV 474


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 199/441 (45%), Gaps = 63/441 (14%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +F +    L +       L+L + +   G  PD   Y  +I+     G V+   +
Sbjct: 174 PPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAM 233

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L    A +V TF  L+ GLC   R+ EAA L  ++   GC P+V+TY  L+ GLC
Sbjct: 234 LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293

Query: 128 RTGHT--------------IVALNLFKEMTNGNGEIGVVFK-----------PNTVTYSI 162
           RT                 +V LN         G++    +           P+  TYSI
Sbjct: 294 RTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSI 353

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ GLCK G    A  +  +M+ +   PN+VTY++L+H FC    W++A+ +L +M+ +G
Sbjct: 354 LMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLL-------------------------DLMVQCD 257
              N    N I+  LCK+GK+D A+RL+                         DLM + +
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473

Query: 258 ----------VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
                     V  N  TYNTL+      G+      L   M   GC+ D  SYN LI   
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V+ +++L  E+  KGIKP   +YN L + L +  +   AL+L  EM    +  D 
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TY T I+GLC   +V +T+A
Sbjct: 594 VTYNTLINGLC---KVGWTHA 611



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 191/412 (46%), Gaps = 39/412 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N++L  LA+   +   L L++R+    + P  +T+ +     C++G+      +
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+ V + ++I  L A+  + EAA L  ++   GC  +V T+N L+ GLC 
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259

Query: 129 TGHTIVALNLF-KEMTNGNGEIGVVFKPNTVTYSIIIDGLCK------------------ 169
            G    A  L  + MT G         P+ VTY  ++ GLC+                  
Sbjct: 260 LGRVREAARLVDRMMTQG-------CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN 312

Query: 170 -------------EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
                        EG + +A EL+  M  +   P+V TY+ L+HG C    +  A  +L 
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM ++G  PN+V+ + +++  C+NG  D+A  +LD M+      N+  YN ++   C  G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K+++   L   M+S GCK D  +YN +I   C N  +EEA  ++  L  +G+    +TYN
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           TL H L    + +  L+L  EM  +    D  +Y   I  LC    V  + A
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 191/399 (47%), Gaps = 37/399 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V++FN L+  L           L  R+ + G  P + TY  L+   C+  Q      + G
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLG 306

Query: 71  R-----------ILRSCFA--------------------PNVVTFTSLIKGLCAESRIVE 99
           R           ++R C                      P+V T++ L+ GLC   R   
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  +  +++  GC PN++TY+TL++  CR G    A  +  +M      +   F  N+  
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM------LAKGFSMNSQG 420

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ II  LCK+G +D+A  L  +MK +   P++ TY ++I+  C+ +   EA+ +   ++
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++GV  N ++ N +++ L +NG+     RL   M+    + +  +YN L+   C  G ++
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R   L   M + G K ++FSYN+LIN  CK  +V +AL L  E+  +G+ P +VTYNTL 
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +GL ++     AL L  ++   +V  D  TY   I   C
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 639



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           ++ GCL + K       L++ + S G  PD++TYSIL++  CK+G+      +   +   
Sbjct: 319 VIRGCLTEGK-LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEK 377

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
             APN+VT+++L+   C      +A A+  ++ A G   N   YN +I  LC+ G    A
Sbjct: 378 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQA 437

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             L +EM +         KP+  TY+ +I  LC    +++A+ +F  +  E +  N +TY
Sbjct: 438 TRLVQEMKSQG------CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LIH       W E   L  EM+  G Q +V+S N ++  LCK G +D +  LL+ MV 
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             ++PN F+YN L++  C  GK+    EL   M + G   D  +YN LING CK      
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           AL+L  +LP + + P +VTYN L     ++R  + A  L 
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLL 651



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L  N   +    +F+ L   G+  +  TY+ LI+   + G+   G  +
Sbjct: 451 PDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRL 510

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +V+++  LIK LC E  +  + AL  ++   G +PN  +YN LIN LC+
Sbjct: 511 ASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCK 570

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L KEM N          P+ VTY+ +I+GLCK G+   A  L  ++  EN+
Sbjct: 571 AGKVRDALELSKEMLNQG------LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           +P++VTY  LI   C     ++A  LL + +  G+ PN
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPN 662



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L +N  +   L L   +   G   D+ +Y+ LI   CK G V     +   +
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN  ++  LI  LC   ++ +A  L  ++   G  P+++TYNTLINGLC+ G T
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             ALNL +++ N N        P+ VTY+I+I   CK   +D A  L  +     + PN 
Sbjct: 610 HAALNLLEKLPNEN------VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNE 663

Query: 193 VTYTSLIHGF 202
            T+  ++  F
Sbjct: 664 RTWGMMVQNF 673



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 1/182 (0%)

Query: 175 KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +A  L  QM     ++P+  +Y  ++     A+   +A  L   M+   V P   +  V 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
              LC+ G+  +A  LL  M +    P+A  Y T++      G +     L   M  MGC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  ++N L+ G C    V EA  L + +  +G  P+VVTY  L  GL   RQA+ A  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 354 LF 355
           + 
Sbjct: 304 ML 305



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +H     V S+N L+  L K  + D  ++L + + + G+ P+ ++Y++LIN  CK G+V 
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVR 575

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +   +L     P++VT+ +LI GLC       A  L  KL      P+++TYN LI
Sbjct: 576 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           +  C+      A  L  +  +G    G+V  PN  T+ +++    ++
Sbjct: 636 SWHCKVRLLDDAAMLLDKAISG----GIV--PNERTWGMMVQNFVRQ 676



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 5/176 (2%)

Query: 213 GLLIEMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           G  + ++DQ      V P+  S NV+++ L +     +A  L   M++  V P  FT+  
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                C  G+      L   M   GC  D   Y  +I+       V EA  L +E+   G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               V T+N L  GL  + +   A +L   M          TY   + GLC   Q 
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N +L  L   K +  V  L   +  +   P++ T++ LI   C+ G       +  
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM   +  +      + VT++I++D  C+ G VD+  EL  QM      P
Sbjct: 336 RWKEAEELLSEMFQKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+TYT++I+GFC     +EA  LL  M   G +PN VS  +++  LC  G+  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + EEAL L N +  KGI P  + Y+++   L    +  + +++F  ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 371 RTFIDGLCVR 380
              I  LC R
Sbjct: 570 NAVISSLCKR 579



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 194/372 (52%), Gaps = 9/372 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP    ++++L    ++  +   + + + +++ G   D    ++++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++       ++V++ +++KGLC   R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR G       +  +M+    E G    P+   Y+ IIDG+CKEG ++ A E+  +M  
Sbjct: 261 LCRNGLFERVHEVLAQMS----EHGCT--PDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PNVV Y +++ G C A  W EA+ LL EM  +    + V+ N++++  C+NG +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              LL+ M+     P+  TY T+++GFC  G I+    L  SM S GCK +  SY I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C      +A  L +++  +G  P  VT+NTL + L +    E+A++L  +M  N  + 
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 366 DTCTYRTFIDGL 377
           D  +Y T IDGL
Sbjct: 495 DLISYSTVIDGL 506



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+G L +N  ++ V  +  +++  G  PD+  Y+ +I+  CK G + +   I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV + +++KGLC+  R  EA  L +++    C  + +T+N L++  C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L ++M +          P+ +TY+ +I+G CKEG +D+A  L   M     
Sbjct: 369 NGLVDRVIELLEQMLSHG------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+YT ++ G C A  W +A+ L+ +M+ QG  PN V+ N ++N LCK G ++ A  
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+     P+  +Y+T++DG    GK     EL   M + G   +   Y+ +     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V + + +++ +    I+   V YN +   L +  + +RA+  F  M  N    +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 603 TYTMLIKGL 611



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + +     L   +       D  T++IL++ FC+ G V     +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + + GC+PN ++Y  ++ GLC 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  +M            PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 439 AGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A    EA  LL  MV++G+ PN +  + I   L + G+++   +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C   + +R  + F  M S GC  ++ +Y +LI G  
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 309 KNKEVEEALSLYNELPFKG 327
                +EA  L +EL  +G
Sbjct: 613 SEGLAKEAQELLSELCSRG 631



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 9/331 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y+ ++  +C+ GQ++    +   +      PN  TF  +++GLC   RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              GC P    Y+ ++   CR+G    ++ + + M      +      +T   +++++ +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL------DTGNCNLVLNAI 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C++G VD+A  L  ++ +     ++V+Y +++ G C A  W + + L+ EMV     PN+
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++  LC+NG  +    +L  M +    P+   Y T++DG C  G +    E+   
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S G K +   YN ++ G C  +  +EA  L +E+  K      VT+N L     +   
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +R ++L  +M  +    D  TY T I+G C
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFC 402



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 47/328 (14%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           +LI+ LC+  R  EAA              V+ YN ++ G CR G    A  L       
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAA---GVVAYNAMVAGYCRAGQLAAARRLAAA---- 104

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                V   PN  T+  ++ GLC  G +  A E+  +M ++   P    Y  ++   C +
Sbjct: 105 -----VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRS 159

Query: 206 NDW-----------------------------------NEAKGLLIEMVDQGVQPNVVSS 230
             +                                   +EA GLL ++   G + ++VS 
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++  LC   +  +   L+D MV+ D  PN  T+NTL+   C  G   RV E+   M  
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNT+  GL    + + 
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A +L  EM   D   D  T+   +D  C
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFC 367



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 38/188 (20%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV Y +++ G+C A    +            V PN  +   ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M      P    Y+ +++  C +G       +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V+EA+ L  +L F G +  +V+YN +                                 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAV--------------------------------- 222

Query: 372 TFIDGLCV 379
             + GLC+
Sbjct: 223 --LKGLCM 228


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N +L  L   K +  V  L   +  +   P++ T++ LI   C+ G       +  
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM   +  +      + VT++I++D  C+ G VD+  EL  QM      P
Sbjct: 336 RWKEAEELLSEMFQKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+TYT++I+GFC     +EA  LL  M   G +PN VS  +++  LC  G+  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + EEAL L N +  KGI P  + Y+++   L    +  + +++F  ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 371 RTFIDGLCVR 380
              I  LC R
Sbjct: 570 NAVISSLCKR 579



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 194/372 (52%), Gaps = 9/372 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP    ++++L    ++  +   + + + +++ G   D    ++++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++       ++V++ +++KGLC   R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR G       +  +M+    E G    P+   Y+ IIDG+CKEG ++ A E+  +M  
Sbjct: 261 LCRNGLFERVHEVLAQMS----EHGCT--PDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PNVV Y +++ G C A  W EA+ LL EM  +    + V+ N++++  C+NG +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              LL+ M+     P+  TY T+++GFC  G I+    L  SM S GCK +  SY I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C      +A  L +++  +G  P  VT+NTL + L +    E+A++L  +M  N  + 
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 366 DTCTYRTFIDGL 377
           D  +Y T IDGL
Sbjct: 495 DLISYSTVIDGL 506



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+G L +N  ++ V  +  +++  G  PD+  Y+ +I+  CK G + +   I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV + +++KGLC+  R  EA  L +++    C  + +T+N L++  C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L ++M +          P+ +TY+ +I+G CKEG +D+A  L   M     
Sbjct: 369 NGLVDRVIELLEQMLSHG------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+YT ++ G C A  W +A+ L+ +M+ QG  PN V+ N ++N LCK G ++ A  
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+     P+  +Y+T++DG    GK     EL   M + G   +   Y+ +     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V + + +++ +    I+   V YN +   L +  + +RA+  F  M  N    +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 603 TYTMLIKGL 611



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + +     L   +       D  T++IL++ FC+ G V     +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + + GC+PN ++Y  ++ GLC 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  +M            PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 439 AGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A    EA  LL  MV++G+ PN +  + I   L + G+++   +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C   + +R  + F  M S GC  ++ +Y +LI G  
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 309 KNKEVEEALSLYNELPFKG 327
                +EA  L +EL  +G
Sbjct: 613 SEGLAKEAQELLSELCSRG 631



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 9/331 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y+ ++  +C+ GQ++    +   +      PN  TF  +++GLC   RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              GC P    Y+ ++   CR+G    ++ + + M      +      +T   +++++ +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL------DTGNCNLVLNAI 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C++G VD+A  L  ++ +     ++V+Y +++ G C A  W + + L+ EMV     PN+
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++  LC+NG  +    +L  M +    P+   Y T++DG C  G +    E+   
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S G K +   YN ++ G C  +  +EA  L +E+  K      VT+N L     +   
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +R ++L  +M  +    D  TY T I+G C
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFC 402



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 47/328 (14%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           +LI+ LC+  R  EAA              V+ YN ++ G CR G    A  L       
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAA---GVVAYNAMVAGYCRAGQLAAARRLAAA---- 104

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                V   PN  T+  ++ GLC  G +  A E+  +M ++   P    Y  ++   C +
Sbjct: 105 -----VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRS 159

Query: 206 NDW-----------------------------------NEAKGLLIEMVDQGVQPNVVSS 230
             +                                   +EA GLL ++   G + ++VS 
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++  LC   +  +   L+D MV+ D  PN  T+NTL+   C  G   RV E+   M  
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNT+  GL    + + 
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A +L  EM   D   D  T+   +D  C
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFC 367



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 38/188 (20%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV Y +++ G+C A    +            V PN  +   ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M      P    Y+ +++  C +G       +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V+EA+ L  +L F G +  +V+YN +                                 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAV--------------------------------- 222

Query: 372 TFIDGLCV 379
             + GLC+
Sbjct: 223 --LKGLCM 228


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 185/364 (50%), Gaps = 14/364 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++ M  SP  V    ++ GC  KN   +     F ++  +GL  + YT+++LIN   K G
Sbjct: 188 LQDMGLSPNVVIYTTLIDGC-CKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKG 246

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               GF +F ++  +   PN+ T+  L+   C E +I  A  LF +++  G E NV+TYN
Sbjct: 247 LKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYN 306

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI G+CR      A  L  +M            PN +TY+ +I G C  G +DKA  L 
Sbjct: 307 TLIGGMCREERVWEAEKLVDQMKKA------AVSPNLITYNTLIGGFCDVGNLDKASSLL 360

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            Q+K   L+P++VTY  LI G+  A +W     L  EM  +G+ P+ V+  V+++   + 
Sbjct: 361 DQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRL 420

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            +M+ A ++   M +  + P+ + Y  L+ G C+ G +    +LF SM  M  +  D  Y
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF-----HGLFEIRQAERALKLF 355
           N +I+GYCK      AL L  E+  KG+ P V +Y+++       G +E  +AE  L   
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWE--EAEVLLDKM 538

Query: 356 VEMQ 359
           +E+Q
Sbjct: 539 IELQ 542



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +N + D    L   L  +GL P++  Y+ LI+  CK G +    + F 
Sbjct: 162 VYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD 221

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++       N  TFT LI GL  +    +   LF K+K  G  PN+ TYN L+N  C  G
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A +LF EM     E GV  + N VTY+ +I G+C+E  V +A++L  QMK   ++P
Sbjct: 282 KICRAFDLFDEMR----ERGV--EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY +LI GFC   + ++A  LL ++   G+ P++V+ N+++    K G     + L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+  T   L+D +    ++ +  +++ SME  G   D + Y +LI+G C  
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             ++E+  L+  +    ++P+ V YNT+ HG  +   + RAL+L  EM+   +  +  +Y
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASY 515

Query: 371 RTFIDGLC 378
            + I  LC
Sbjct: 516 SSIIGVLC 523



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 180/365 (49%), Gaps = 7/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN LLG L ++  ++     F  L     F D+Y++ I+I   C+ G +   F + G + 
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               +PNVV +T+LI G C    I  A   F K+   G   N  T+  LINGL + G   
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
              +LF++M     +I  +F PN  TY+ +++  C EG + +A +LF +M+   +  NVV
Sbjct: 250 DGFDLFEKM-----KINGLF-PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +LI G C      EA+ L+ +M    V PN+++ N ++   C  G +D AS LLD +
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P+  TYN L++G+   G    V +L   ME  G      +  +LI+ Y + +E+
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  +Y+ +   G+ P V  Y  L HGL      + + KLF  M    V      Y T 
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483

Query: 374 IDGLC 378
           I G C
Sbjct: 484 IHGYC 488



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 19/389 (4%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGL------FPDLYTYSILINC 55
           ++ +PS      +  ++    K++  D  L  F  +   GL      F  L    +  NC
Sbjct: 84  QNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNC 143

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K         +F   L+     +V +F  +IKG C    + ++  L   L+  G  PN
Sbjct: 144 FEKAW-------LFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPN 196

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V+ Y TLI+G C+ G    A   F +M    GE+G+V   N  T++++I+GL K+G    
Sbjct: 197 VVIYTTLIDGCCKNGDIERARLFFDKM----GEMGLV--ANQYTFTVLINGLFKKGLKKD 250

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
             +LF +MK   L PN+ TY  L++ +C       A  L  EM ++GV+ NVV+ N ++ 
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            +C+  ++  A +L+D M +  V PN  TYNTL+ GFC  G +++   L   ++S G   
Sbjct: 311 GMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSP 370

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
              +YNILI GY K    +    L  E+  +GI P+ VT   L      +++ E+A +++
Sbjct: 371 SLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY 430

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             M+   +  D   Y   I GLC++  ++
Sbjct: 431 SSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 168/326 (51%), Gaps = 6/326 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F +L+  L K         LF+++   GLFP+LYTY+ L+N +C  G++   F +F  +
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM 293

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  NVVT+ +LI G+C E R+ EA  L  ++K     PN+ITYNTLI G C  G+ 
Sbjct: 294 RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNL 353

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L  ++ + NG       P+ VTY+I+I+G  K G      +L  +M+   ++P+ 
Sbjct: 354 DKASSLLDQLKS-NG-----LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSK 407

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT T LI  +    +  +A  +   M   G+ P+V    V+++ LC  G M  +S+L   
Sbjct: 408 VTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRS 467

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +  V P+   YNT++ G+C      R   L   ME+ G   +  SY+ +I   CK+ +
Sbjct: 468 MGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTL 338
            EEA  L +++    +KP+    N +
Sbjct: 528 WEEAEVLLDKMIELQLKPSASILNMI 553


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 10/369 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ ++  LAK       L +F+ + S    P L TY++LIN  C  G+      +F  +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 73  LRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
            R     P+  T+ +LI GLC+      A  L ++++      NV TY+++I  L +   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              +  + +EM      +     P+   ++ ++ G  +   ++KA+E++  M      P+
Sbjct: 132 PEESYKVLEEM------MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            V+Y  LIHG       +E+  +L EM     G  PNV++ + +++ LC+ G+++ A  +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M++   +PN +TY TL+ G C   K+ + +ELF  M       D  +YN LI GYCK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 310 NKEVEEALSLYNELP-FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++EA  LY E+    G++PT+VT+NTL  G  ++ +  RA +L  EM    +AADTC
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 369 TYRTFIDGL 377
           TYR  I GL
Sbjct: 366 TYRILIAGL 374



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 193/384 (50%), Gaps = 10/384 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLN-SIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N+L+        +   L LF+ +     + PD +TY+ LI+  C  G       
Sbjct: 43  PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +     A NV T++S+IK L  E++  E+  +  ++ A GC P+V  +N ++ G  
Sbjct: 103 LLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFA 162

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMKY 185
           R+ +   A  +++ M          +KP+ V+Y I+I GL K G +D++ ++   + M+ 
Sbjct: 163 RSNNMEKAREVYQHMVESG------YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PNV+T+++LIHG C   +  +A  +   M++ G +PN  +   ++  LC+  K+  
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES-MGCKHDDFSYNILI 304
           A  L + M Q  + P+A  YN+L+ G+C  G ++  ++L+  M    G +    ++N LI
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+CK  ++  A  L  E+  KG+     TY  L  GL    + + AL+++ +M+     
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
            D  +  +F+ GLC    +   YA
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYA 420



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 179/359 (49%), Gaps = 9/359 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +++ ++  L K    +    + + + + G  PD++ ++ ++  F +   +     ++ 
Sbjct: 116 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 175

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCR 128
            ++ S + P+ V++  LI GL    ++ E+  + +++  +A G  PNVIT++TLI+GLCR
Sbjct: 176 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCR 235

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    AL +F  M     E G   KPN  TY+ +I GLC+   V +A+ELF +M    +
Sbjct: 236 TGELEKALEVFGSML----EAGC--KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+ V Y SLI G+C     +EA+ L  EM    G+QP +V+ N +++  CK GK+  A+
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+  M    +  +  TY  L+ G     K++   E++  M       D  S    + G 
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           CK   +++A +++      G  P   T+  L   L ++ + E A KL    +  D+ A 
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 151/296 (51%), Gaps = 7/296 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +++ L     + +A  +F  +K+  C P+++TYN LIN  C  G    AL+LF+ M    
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                  +P+  TY+ +I GLC  G  + A++L  +M+ +N+  NV TY+S+I       
Sbjct: 76  -----RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              E+  +L EM+  G  P+V + N +M    ++  M+ A  +   MV+   +P+  +Y+
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190

Query: 267 TLMDGFCLTGKINRVKELF--VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            L+ G    GK++   ++   ++M + G   +  +++ LI+G C+  E+E+AL ++  + 
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             G KP   TY TL  GL    +  +A +LF +M    +  D   Y + I G C R
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 144/288 (50%), Gaps = 9/288 (3%)

Query: 2   RHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFC 57
           +HM  S   P   S++IL+  LAK    D  L +   +   + G  P++ T+S LI+  C
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC 234

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           + G++     +FG +L +   PN  T+T+LI GLC   ++++A  LF K+      P+ +
Sbjct: 235 RTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            YN+LI G C+ G    A  L++EM+ G G      +P  VT++ +IDG CK G + +A 
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAG-----LQPTIVTFNTLIDGFCKLGKLGRAN 349

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           EL  +M  + L  +  TY  LI G   A   +EA  +  +M ++    + VS    +  L
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           CK G +D A  + +   +    PN  T+  L +     G++   ++L 
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 145/269 (53%), Gaps = 9/269 (3%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            Y+ ++  L + G    AL +F+ M + +        P+ VTY+++I+  C  G   KA 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSES------CVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 178 ELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +LF  MK E  + P+  TY +LI G C + +   A+ LL EM D+ +  NV + + I+  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           L K  K + + ++L+ M+     P+ F +N +M GF  +  + + +E++  M   G K D
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKL 354
           + SY+ILI+G  K  +++E+L + +E+  +  G  P V+T++TL HGL    + E+AL++
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           F  M       +  TY T I GLC   +V
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKV 274



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 54/132 (40%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+    K         L   + + GL  D  TY ILI    +  ++     +
Sbjct: 327 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEV 386

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++    F  + V+  S + GLC    I +A A+F   +  G  PN  T+  L   L +
Sbjct: 387 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 446

Query: 129 TGHTIVALNLFK 140
            G    A  L +
Sbjct: 447 LGRVEDAQKLME 458


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 192/376 (51%), Gaps = 9/376 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   P PP    ++++L    +   + + + + + L++ G   D+   ++++N  C  G 
Sbjct: 151 RGCAPIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +   +      P+VV++ +++KGLC   R      L  ++    C PN++T+NT
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+ LCR G          E+     E G    P+   Y+ IIDG+CKEG +  A E+  
Sbjct: 268 LISYLCRNG----LFERVHEVLAQMAEHGCT--PDIRMYATIIDGICKEGHLKVAHEILN 321

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M    L PNVV Y +L+ G C A  W E + LL EM D+    + V+ N++++  C+NG
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            +D    LL+ M+     P+  TY T+++GFC  G I+    L  SM + GCK +  SY 
Sbjct: 382 LVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           I++ G C  +   +A  L +++  +G     +T+NTL + L +    E+A++L  +M  N
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 362 DVAADTCTYRTFIDGL 377
             + D  +Y T IDGL
Sbjct: 502 GCSPDLISYSTVIDGL 517



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 186/372 (50%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N +L  L   K +  V  L + +  +   P++ T++ LI+  C+ G       +
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNTL+ GLC 
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    L  EM + +  +      + VT++I++D  C+ G VD+  EL  QM     
Sbjct: 345 AERWEETEELLAEMFDKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGC 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT++I+GFC     +EA  LL  M   G +PN +S  +++  LC   +  +A  
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+Q     N  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +EAL L N +  KG+ P  + Y+++   L    +  + +++F  +Q   + +D  
Sbjct: 519 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 578

Query: 369 TYRTFIDGLCVR 380
            Y   I  LC R
Sbjct: 579 LYNAVISSLCKR 590



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 8/371 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + +FN L+  L +N  ++ V  +  ++   G  PD+  Y+ +I+  CK G + +   
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHE 318

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+      PNVV + +L+KGLC+  R  E   L  ++    C  + +T+N L++  C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           + G     + L ++M  +G         P+ +TY+ +I+G CKEG +D+A  L   M   
Sbjct: 379 QNGLVDRVIELLEQMLVHG-------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN ++YT ++ G C A  W +A+ L+ +M+ QG   N ++ N ++N LCK G ++ A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             LL  M+     P+  +Y+T++DG    GK +   EL   M + G   +   Y+ + + 
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
             +   + + + +++ +    I+   V YN +   L +  + ERA++    M  +    +
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 367 TCTYRTFIDGL 377
             TY   I GL
Sbjct: 612 ESTYTILIRGL 622



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 158/340 (46%), Gaps = 6/340 (1%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           ++ + P+ YTY  ++   C  G+++    +   + R   AP    +  +++  C      
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A  +   L A GC  +V   N ++N +C  G    AL+L +++ +   E      P+ V
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCE------PDVV 228

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+ ++ GLC        +EL  +M      PN+VT+ +LI   C    +     +L +M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            + G  P++     I++ +CK G +  A  +L+ M    ++PN   YNTL+ G C   + 
Sbjct: 289 AEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              +EL   M    C  DD ++NIL++ +C+N  V+  + L  ++   G  P V+TY T+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTV 408

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G  +    + A+ L   M       +T +Y   + GLC
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 131/332 (39%), Gaps = 47/332 (14%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           V  +SLI+ LCA  R  EAA   +          V+ YN ++ G CR G    A  L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA- 114

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                    V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++  
Sbjct: 115 --------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 166

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA--------------- 246
            C    +  A  +L ++  +G   +V + N+++N +C  G +D A               
Sbjct: 167 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPD 226

Query: 247 --------------------SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
                                 L++ MV+    PN  T+NTL+   C  G   RV E+  
Sbjct: 227 VVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   GC  D   Y  +I+G CK   ++ A  + N +P  G+KP VV YNTL  GL    
Sbjct: 287 QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E   +L  EM   D   D  T+   +D  C
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N +L  L   K +D V  L   +  +G  P++ T++ LI   C+ G        
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P++  + ++I G+C +     A  + +++ ++G +PNV+ YNT++ GLC 
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM   +  +      + VT++I++D  C+ G VD+  EL  QM     
Sbjct: 331 AERWEEAEDLLAEMFQEDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 384

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT++I+GFC     +EA  LL  M   G +PN +S  +++  LC+  +  +A  
Sbjct: 385 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQE 444

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  
Sbjct: 445 LISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 504

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + EEAL L N +  KGI P  + Y+++   L    + ++ +++F  +Q   V +D  
Sbjct: 505 KAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAA 564

Query: 369 TYRTFIDGLCVR 380
            Y   I  LC R
Sbjct: 565 LYNAVISSLCKR 576



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 196/370 (52%), Gaps = 10/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           PP+   +++L    +   + + +   + L++ G   D    +++++  C+ G V  G  +
Sbjct: 143 PPMC--HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVEL 200

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P++V++ +++KGLC   R  +   L  ++   GC PNV T+NTLI  LCR
Sbjct: 201 LRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCR 260

Query: 129 TGHTIVALNLFKEMTNGNGEIGV-VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G       LF+++     ++      P+   Y+ IIDG+CK+G  + A ++  +M    
Sbjct: 261 NG-------LFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNVV Y +++ G C A  W EA+ LL EM  +    + V+ N++++  C+NG +D   
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M++    P+  TY T+++GFC  G ++    L  +M + GCK +  SY I++ G 
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ +   +A  L + +  +G  P  VT+NTL + + +    E+A++L  +M  N  + D 
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDL 493

Query: 368 CTYRTFIDGL 377
            +Y T IDGL
Sbjct: 494 ISYSTVIDGL 503



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V++FN L+  L +N  ++ V     ++   G  PDL  Y+ +I+  CK G   +   
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+      PNVV + +++KGLC+  R  EA  L  ++    C  + +T+N L++  C
Sbjct: 305 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + L ++M     E G +  P+ +TY+ +I+G CKEG VD+A  L   M    
Sbjct: 365 QNGLVDRVIELLEQML----EHGCI--PDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN ++YT ++ G C A  W +A+ L+  M+ QG  PN V+ N ++N +CK G ++ A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M+     P+  +Y+T++DG    GK     EL   M + G   +   Y+ + +  
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +    ++ + +++ +    ++     YN +   L +  + +RA+  F  M  N    + 
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY   I GL     VR
Sbjct: 599 STYTILIRGLASEGLVR 615



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 159/315 (50%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + ++    L   +       D  T++IL++ FC+ G V     +
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 375

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  + EA  L   + A GC+PN I+Y  ++ GLCR
Sbjct: 376 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 435

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  L   M            PN VT++ +I+ +CK+G V++A EL  QM     
Sbjct: 436 AERWVDAQELISHMIQQG------CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A    EA  LL  M+++G+ PN +  + + + L + G+ D   +
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    VR +A  YN ++   C   + +R  + F  M S GC  ++ +Y ILI G  
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 609

Query: 309 KNKEVEEALSLYNEL 323
               V EA  L +EL
Sbjct: 610 SEGLVREAQDLLSEL 624



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 44/379 (11%)

Query: 35  KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAE 94
           + L++ G    +  Y+ +I  +C+ GQV+    +   +      PN  T+  +++ LCA 
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
             I +A  +  ++   GC       + ++   CR G    A+   + +      +     
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTL----- 176

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            ++   ++++  +C++G VD+  EL  ++      P++V+Y +++ G C A  W++ + L
Sbjct: 177 -DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDN----------------------------- 245
           ++EMV  G  PNV + N ++  LC+NG  +                              
Sbjct: 236 MVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK 295

Query: 246 ------ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
                 A+ +L  M    ++PN   YNT++ G C   +    ++L   M    C  DD +
Sbjct: 296 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 355

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +NIL++ +C+N  V+  + L  ++   G  P V+TY T+ +G  +    + A+ L   M 
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 +T +Y   + GLC
Sbjct: 416 ACGCKPNTISYTIVLKGLC 434



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 133/331 (40%), Gaps = 49/331 (14%)

Query: 84  FTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            ++LI+ LCA  R  +AA AL T   A G    V+ YN +I G CR G    A  L    
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAG----VVAYNAMIAGYCRAGQVAAARRLAAA- 101

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                   V   PN  TY  I+  LC  G +  A  +  +M              ++   
Sbjct: 102 --------VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAA 153

Query: 203 CHANDWNE---------AKGLLIEM---------------VDQGV-----------QPNV 227
           C    +           AKG  ++                VD+GV           +P++
Sbjct: 154 CRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDI 213

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           VS N ++  LC   + D+   L+  MV+    PN  T+NTL+   C  G   +V E    
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQ 273

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   GC  D   Y  +I+G CK+   E A  + + +P  G+KP VV YNT+  GL    +
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            E A  L  EM   D   D  T+   +D  C
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N +L  L   K +  V  L   +  +   P++ T++ LI   C+ G       +  
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM   +  +      + VT++I++D  C+ G VD+  EL  QM      P
Sbjct: 336 RWKEAEELLSEMFQKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+TYT++I+GFC     +EA  LL  M   G +PN VS  +++  LC  G+  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + EEAL L N +  KGI P  + Y+++   L    +  + +++F  ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 371 RTFIDGLCVR 380
              I  LC R
Sbjct: 570 NAVISSLCKR 579



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 194/372 (52%), Gaps = 9/372 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP    ++++L    ++  +   + + + +++ G   D    ++++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++       ++V++ +++KGLC   R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR G       +  +M+    E G    P+   Y+ IIDG+CKEG ++ A E+  +M  
Sbjct: 261 LCRNGLFERVHEVLAQMS----EHGCT--PDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PNVV Y +++ G C A  W EA+ LL EM  +    + V+ N++++  C+NG +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              LL+ M+     P+  TY T+++GFC  G I+    L  SM S GCK +  SY I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C      +A  L +++  +G  P  VT+NTL + L +    E+A++L  +M  N  + 
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 366 DTCTYRTFIDGL 377
           D  +Y T IDGL
Sbjct: 495 DLISYSTVIDGL 506



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+G L +N  ++ V  +  +++  G  PD+  Y+ +I+  CK G + +   I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV + +++KGLC+  R  EA  L +++    C  + +T+N L++  C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L ++M +          P+ +TY+ +I+G CKEG +D+A  L   M     
Sbjct: 369 NGLVDRVIELLEQMLSHG------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+YT ++ G C A  W +A+ L+ +M+ QG  PN V+ N ++N LCK G ++ A  
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+     P+  +Y+T++DG    GK     EL   M + G   +   Y+ +     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V + + +++ +    I+   V YN +   L +  + +RA+  F  M  N    +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 603 TYTMLIKGL 611



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + +     L   +       D  T++IL++ FC+ G V     +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + + GC+PN ++Y  ++ GLC 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  +M            PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 439 AGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A    EA  LL  MV++G+ PN +  + I   L + G+++   +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C   + +R  + F  M S GC  ++ +Y +LI G  
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 309 KNKEVEEALSLYNELPFKG 327
                +EA  L +EL  +G
Sbjct: 613 SEGLAKEAQELLSELCSRG 631



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 9/331 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y+ ++  +C+ GQ++    +   +      PN  TF  +++GLC   RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              GC P    Y+ ++   CR+G    ++ + + M      +      +T   +++++ +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL------DTGNCNLVLNAI 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C++G VD+A  L  ++ +     ++V+Y +++ G C A  W + + L+ EMV     PN+
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++  LC+NG  +    +L  M +    P+   Y T++DG C  G +    E+   
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S G K +   YN ++ G C  +  +EA  L +E+  K      VT+N L     +   
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +R ++L  +M  +    D  TY T I+G C
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFC 402



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 47/328 (14%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           +LI+ LC+  R  EAA              V+ YN ++ G CR G    A  L       
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAA---GVVAYNAMVAGYCRAGQLAAARRLAAA---- 104

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                V   PN  T+  ++ GLC  G +  A E+  +M ++   P    Y  ++   C +
Sbjct: 105 -----VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRS 159

Query: 206 NDW-----------------------------------NEAKGLLIEMVDQGVQPNVVSS 230
             +                                   +EA GLL ++   G + ++VS 
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++  LC   +  +   L+D MV+ D  PN  T+NTL+   C  G   RV E+   M  
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNT+  GL    + + 
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A +L  EM   D   D  T+   +D  C
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFC 367



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 46/202 (22%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV Y +++ G+C A    +            V PN  +   ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M      P    Y+ +++  C +G       +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V+EA+ L  +L F G +  +V+YN +                                 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAV--------------------------------- 222

Query: 372 TFIDGLCVRPQVRFTYARRKGN 393
             + GLC+        A+R G+
Sbjct: 223 --LKGLCM--------AKRWGD 234


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N +L  L   K +  V  L   +  +   P++ T++ LI   C+ G       +  
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P++  + ++I G+C E  +  A  +  ++ ++G +PNV+ YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM   +  +      + VT++I++D  C+ G VD+  EL  QM      P
Sbjct: 336 RWKEAEELLSEMFQKDCPL------DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V+TYT++I+GFC     +EA  LL  M   G +PN VS  +++  LC  G+  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+Q    PN  T+NTL++  C  G + +  EL   M   GC  D  SY+ +I+G  K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + EEAL L N +  KGI P  + Y+++   L    +  + +++F  ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 371 RTFIDGLCVR 380
              I  LC R
Sbjct: 570 NAVISSLCKR 579



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 194/372 (52%), Gaps = 9/372 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP    ++++L    ++  +   + + + +++ G   D    ++++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++       ++V++ +++KGLC   R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LCR G       +  +M+    E G    P+   Y+ IIDG+CKEG ++ A E+  +M  
Sbjct: 261 LCRNGLFERVHEVLAQMS----EHGCT--PDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L PNVV Y +++ G C A  W EA+ LL EM  +    + V+ N++++  C+NG +D 
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
              LL+ M+     P+  TY T+++GFC  G I+    L  SM S GCK +  SY I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C      +A  L +++  +G  P  VT+NTL + L +    E+A++L  +M  N  + 
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494

Query: 366 DTCTYRTFIDGL 377
           D  +Y T IDGL
Sbjct: 495 DLISYSTVIDGL 506



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+G L +N  ++ V  +  +++  G  PD+  Y+ +I+  CK G + +   I
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      PNVV + +++KGLC+  R  EA  L +++    C  + +T+N L++  C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L ++M +          P+ +TY+ +I+G CKEG +D+A  L   M     
Sbjct: 369 NGLVDRVIELLEQMLSHG------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+YT ++ G C A  W +A+ L+ +M+ QG  PN V+ N ++N LCK G ++ A  
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+     P+  +Y+T++DG    GK     EL   M + G   +   Y+ +     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V + + +++ +    I+   V YN +   L +  + +RA+  F  M  N    +  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 369 TYRTFIDGL 377
           TY   I GL
Sbjct: 603 TYTMLIKGL 611



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + +     L   +       D  T++IL++ FC+ G V     +
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + + GC+PN ++Y  ++ GLC 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L  +M            PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 439 AGRWVDAEELMSQMIQQG------CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A    EA  LL  MV++G+ PN +  + I   L + G+++   +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C   + +R  + F  M S GC  ++ +Y +LI G  
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 309 KNKEVEEALSLYNELPFKG 327
                +EA  L +EL  +G
Sbjct: 613 SEGLAKEAQELLSELCSRG 631



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 9/331 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y+ ++  +C+ GQ++    +   +      PN  TF  +++GLC   RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
              GC P    Y+ ++   CR+G    ++ + + M      +      +T   +++++ +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL------DTGNCNLVLNAI 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C++G VD+A  L  ++ +     ++V+Y +++ G C A  W + + L+ EMV     PN+
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N ++  LC+NG  +    +L  M +    P+   Y T++DG C  G +    E+   
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M S G K +   YN ++ G C  +  +EA  L +E+  K      VT+N L     +   
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +R ++L  +M  +    D  TY T I+G C
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFC 402



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 47/328 (14%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           +LI+ LC+  R  EAA              V+ YN ++ G CR G    A  L       
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAA---GVVAYNAMVAGYCRAGQLAAARRLAAA---- 104

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                V   PN  T+  ++ GLC  G +  A E+  +M ++   P    Y  ++   C +
Sbjct: 105 -----VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRS 159

Query: 206 NDW-----------------------------------NEAKGLLIEMVDQGVQPNVVSS 230
             +                                   +EA GLL ++   G + ++VS 
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSY 219

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++  LC   +  +   L+D MV+ D  PN  T+NTL+   C  G   RV E+   M  
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE 279

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            GC  D   Y  +I+G CK   +E A  + N +P  G+KP VV YNT+  GL    + + 
Sbjct: 280 HGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE 339

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A +L  EM   D   D  T+   +D  C
Sbjct: 340 AEELLSEMFQKDCPLDDVTFNILVDFFC 367



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 38/188 (20%)

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VV Y +++ G+C A    +            V PN  +   ++  LC  G++ +A  +LD
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M      P    Y+ +++  C +G       +  +M + GC  D  + N+++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            V+EA+ L  +L F G +  +V+YN +                                 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAV--------------------------------- 222

Query: 372 TFIDGLCV 379
             + GLC+
Sbjct: 223 --LKGLCM 228


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 183/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + J
Sbjct: 101 HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJ 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + D+
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DJY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 71  DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQ 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDSAFEHRK 341



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 12/278 (4%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIIDG 166
           Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I  
Sbjct: 22  YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 81

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
             + GF+  A E +   +         T   ++        +    G   E+++ G   +
Sbjct: 82  YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 141

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           +   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L  
Sbjct: 142 LYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  +  
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 173/326 (53%), Gaps = 9/326 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SFN ++  + +    D   +L +R++  G+ PD+YTY  LI   C++G++     +F 
Sbjct: 275 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 334

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      PN V FT LI   C +        L  +++  G  P+ +TYN ++NGLCR  
Sbjct: 335 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +  EM +         +P+TVTY+ +IDG CKE  +D A E+   M  E +  
Sbjct: 395 DLKSASGIVVEMRSAG------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + VTYT+LI G   A    +A+ +L EM++ G++P+  +  ++++  C+ G +    RLL
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 508

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M     +P   TYN +M+GFC  G++     L  +M ++G   DD +YNIL++G+CK+
Sbjct: 509 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568

Query: 311 ---KEVEEALSLYNELPFKGIKPTVV 333
               ++EE  S    +P  G+  ++V
Sbjct: 569 GKVTDIEELKSAKGTVPDLGVYTSIV 594



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           + + +L   GL P+   +++L+    ++G+++    +F  +        VV+F ++I G+
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +  A  L  ++   G  P+V TY  LI GLCR G    A  +F++M  G G    
Sbjct: 286 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC-GRG---- 340

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             KPN V ++I+ID  CK+G  +   EL  +M+   + P+ VTY ++++G C A D   A
Sbjct: 341 -MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 399

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            G+++EM   G++P+ V+   +++  CK  ++D A  +   MV   V  +  TY  L+ G
Sbjct: 400 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 459

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               G+    + +   M   G + D+ +Y ++I+ +C+  +V+  L L  E+  KG KP 
Sbjct: 460 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 519

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           VVTYN + +G  ++ Q + A  L   M    V+ D  TY   +DG C   +V
Sbjct: 520 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    FN+L+  L +     +  ++F  + S G+   + +++ +I+  C+ G +     
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R+  +   P+V T+ +LI+GLC   RI +A  +F K+   G +PN + +  LI+  C
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     L L +EM     E GV  +P+ VTY+ I++GLC+   +  A  + ++M+   
Sbjct: 357 KKGDAETMLELHREMR----ERGV--RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VTYT+LI G+C   + + A  +   MV +GV  + V+   +++ L K G+  +A 
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  M++  + P+  TY  ++D FC  G +     L   M++ G K    +YN+++NG+
Sbjct: 471 RVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGF 530

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           CK  +++ A  L N +   G+ P  +TYN L  G
Sbjct: 531 CKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 564



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 6/286 (2%)

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA A + +L   G  P    +N L+  L R G    A N+F EM +         +   V
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG------VRRTVV 276

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +++ +I G+C+ G +D A+ L  +M    + P+V TY +LI G C      +A+G+  +M
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +G++PN V   ++++  CK G  +    L   M +  VRP+A TYN +++G C    +
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                + V M S G + D  +Y  LI+GYCK +E++ A+ +   +  +G+    VTY  L
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             GL +  ++  A ++  EM    +  D  TY   ID  C +  V+
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 502



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 9/227 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L + +   +   +   + S GL PD  TY+ LI+ +CK  ++ +   I
Sbjct: 378 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 437

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      + VT+T+LI GL    R  +A  +  ++   G EP+  TY  +I+  CR
Sbjct: 438 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 497

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L L KEM N         KP  VTY++I++G CK G +  A  L   M    +
Sbjct: 498 KGDVKTGLRLLKEMQNKG------RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGV 551

Query: 189 NPNVVTYTSLIHGFC---HANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +P+ +TY  L+ G C      D  E K     + D GV  ++V   V
Sbjct: 552 SPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIV 598


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N  +G L +    D  L + K +   GL PD +TY++L++ FCK  +     +I
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   PN  T+T+LI G   E  I EA  +  ++   G + NV+TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF EM     E      P+T TY+++IDG  K   + KA EL  +MK   L
Sbjct: 394 AGEMAKAMSLFNEMLMAGIE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+ LI G CH++D  +A  +L +M+  GV+PNV     ++    +  + + A  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M+   V P+ F YN L+ G C   K+   K L V M   G K +  +Y   IN Y 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ E++ A   + ++   GI P  V Y  L  G  ++     AL  F  M    +  D  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 369 TYRTFIDGL 377
            Y   I  L
Sbjct: 628 AYSAIIHSL 636



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 185/353 (52%), Gaps = 7/353 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           S+F    S G FP L   + L+    K   + L + ++G ++ +   P+V T+T++IK  
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +++   + ++++   C+PN+ TYN  I GLC+TG    AL + K M         
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG----- 306

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  TY++++DG CK+    +AK +F  M    LNPN  TYT+LI GF    +  EA
Sbjct: 307 -LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +  EM+ +G++ NVV+ N ++  + K G+M  A  L + M+   + P+ +TYN L+DG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +  +  + +  EL   M++       F+Y++LI+G C + ++++A  + +++   G+KP 
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           V  Y TL     +  + E A++L   M  N V  D   Y   I GLC   +V 
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 186/372 (50%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L + K  +    L   +   G+ P+ +TY   IN + K G++ +    
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L S   PN V +T LIKG C     VEA + F  +   G  P++  Y+ +I+ L +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A+ +F +      + GVV  P+   Y+ +I G CKEG ++KA +L+ +M +  +
Sbjct: 639 NGKTKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 189 NPNVVTYTSLI--HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           NPN+V Y +LI  +G+C + +  EA  L  EM+ +G+ P+     ++++   K G ++ A
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L     Q  V   +  +N+L+D FC  GK+   +ELF  M       +  +Y ILI+ 
Sbjct: 753 LSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K + +EEA  L+ ++  + I P  +TY +L     +I    + + LF +M+   +A D
Sbjct: 812 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 871

Query: 367 TCTYRTFIDGLC 378
              Y       C
Sbjct: 872 AIAYGVMASAYC 883



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 9/349 (2%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LS FK +   GL PD+  YS +I+   K G+      +F + L++   P+V  + SLI 
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN--GLCRTGHTIVALNLFKEMTNGNG 147
           G C E  I +A+ L+ ++   G  PN++ YNTLIN  G C++G+   A  LF EM     
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM----- 724

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            I     P+   Y I+IDG  KEG ++KA  LF + + +++  ++  + SLI  FC    
Sbjct: 725 -ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGK 782

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             EA+ L  +MVD+ + PN+V+  ++++   K   M+ A +L   M   ++ PN  TY +
Sbjct: 783 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 842

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+  +   G   ++  LF  ME+ G   D  +Y ++ + YCK  +  EAL L N+   +G
Sbjct: 843 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 902

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           IK     ++ L   L + +Q    L+L  EM   +++  + T  T + G
Sbjct: 903 IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 169/339 (49%), Gaps = 14/339 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+L+TY+  I   C+ G V     +   ++     P+  T+T L+ G C + R  EA  +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSI 162
           F  + + G  PN  TY  LI+G  + G+   AL +  EM T G        K N VTY+ 
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG-------LKLNVVTYNA 386

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G+ K G + KA  LF +M    + P+  TY  LI G+  ++D  +A  LL EM  + 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P+  + +V+++ LC +  +  A+ +LD M++  V+PN F Y TL+  +    +     
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT---LF 339
           EL   M + G   D F YN LI G C+ K+VEEA  L  ++  KGIKP   TY     L+
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               EI+ AER  K   +M  + +  +   Y   I G C
Sbjct: 567 SKSGEIQVAERYFK---DMLSSGIVPNNVIYTILIKGHC 602



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 164/362 (45%), Gaps = 42/362 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ ++  L+KN      + +F +    G+ PD++ Y+ LI+ FCK G +     +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 69  FGRILRSCFAPNVVTFTSLIK--GLCAESRIVEAAALFTKLKAFGCEPN----------- 115
           +  +L +   PN+V + +LI   G C    + EA  LF ++ + G  P+           
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743

Query: 116 -----------------------VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
                                  +  +N+LI+  C+ G  I A  LF +M +        
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK------ 797

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN VTY+I+ID   K   +++A++LFL M+  N+ PN +TYTSL+  +    +  +  
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  +M  +G+  + ++  V+ +  CK GK   A +LL+  +   ++     ++ L+   
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +I+ V EL   M          + N L+ G+ K+   +EA  +   +   G  PT 
Sbjct: 918 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977

Query: 333 VT 334
           ++
Sbjct: 978 LS 979



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 159 TYSIIIDGLCKEGFVDKAK---ELFLQMKYENLN--------------PNVVTYTSLIHG 201
           +YSI+   LC  G + +A    E  LQ +   L                N+  +   I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F      NEA  + I  + +G  P ++  N +M +L K   M    ++   MV+  + P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            +TY  ++   C  G + + K +   ME   CK + F+YN  I G C+   V+EAL +  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            +  KG+ P   TY  L  G  + ++++ A  +F  M  + +  +  TY   IDG
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDG 355


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 208/423 (49%), Gaps = 48/423 (11%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+H    P  VS +N +L  L K    +    L   + + GLFP+  T++IL++ +CK+G
Sbjct: 74  MKHFSCFPDNVS-YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLG 132

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +   + R+   P+V T+T+LI GLC + +I EA  L  +++     P+V+TYN
Sbjct: 133 WLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYN 192

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LING      ++    L  EM  G G      KPN VTY++++    KEG +D A    
Sbjct: 193 MLINGCFECSSSLKGFELIDEM-EGKG-----VKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M+    +P+ VT+ +L +G+C A   +EA  ++ EM  +G++ N V+ N I++ LC  
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 241 GKMDNASRLL-------------------------------DLMVQCDVRPNAFTYNTLM 269
            K+D+A +LL                               D M + ++ P+  TY T++
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMI 366

Query: 270 DGFCLTGK----INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            G C +GK    I++  EL  S    G   D  +YN +I GYC+  +V++A    N++  
Sbjct: 367 GGLCRSGKTDQSIDKCNELLES----GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVK 422

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           K  KP + T N L  GL      ++ALKLF        A D  T+ T I GLC   + RF
Sbjct: 423 KSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC--EEGRF 480

Query: 386 TYA 388
             A
Sbjct: 481 EEA 483



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 12/346 (3%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQ---VSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
            KRL+   L P+L T + LI    +      V L   IF  +++     N  TF  LI G
Sbjct: 1   MKRLH---LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICG 57

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C E+++ EA  L  K+K F C P+ ++YNT+++ LC+ G    A +L  +M N NG   
Sbjct: 58  CCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NG--- 113

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               PN  T++I++ G CK G++ +A E+   M   N+ P+V TYT+LI G C     +E
Sbjct: 114 --LFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDE 171

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  EM +  + P+VV+ N+++N   +         L+D M    V+PNA TYN ++ 
Sbjct: 172 AFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVK 231

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            +   GK++        ME  G   D  ++N L NGYCK   + EA  + +E+  KG+K 
Sbjct: 232 WYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKM 291

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             VT NT+ H L   R+ + A KL           D  +Y T I G
Sbjct: 292 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 194/382 (50%), Gaps = 16/382 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVL---SLFKRLNSIGLFPDLYTYSILINCFC 57
           M+ +H  P  ++  N L+  L +     +V    ++F  +  +G+  +  T++ILI   C
Sbjct: 1   MKRLHLKPNLLT-LNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCC 59

Query: 58  KMGQVSLGFVIFGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
              ++S    + G++   SCF P+ V++ +++  LC + ++ EA  L   +K  G  PN 
Sbjct: 60  IENKLSEAIGLIGKMKHFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
            T+N L++G C+ G    A  +   M   N        P+  TY+ +I GLCK+G +D+A
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNN------VLPDVRTYTTLIGGLCKDGKIDEA 172

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             L  +M+   L P+VVTY  LI+G    +   +   L+ EM  +GV+PN V+ NV++  
Sbjct: 173 FRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKW 232

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
             K GKMDNA   L  M +    P+  T+NTL +G+C  G+++    +   M   G K +
Sbjct: 233 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMN 292

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             + N +++  C  +++++A  L +    +G     V+Y TL  G F++ ++      + 
Sbjct: 293 SVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWD 348

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
           EM+  ++     TY T I GLC
Sbjct: 349 EMKEKEIIPSIITYGTMIGGLC 370



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 60/390 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K    D   +  +++   G  PD  T++ L N +CK G++S  F +
Sbjct: 221 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRM 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT----------------------- 105
              + R     N VT  +++  LC E ++ +A  L +                       
Sbjct: 281 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 340

Query: 106 --------KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                   ++K     P++ITY T+I GLCR+G T  +++   E+     E G+V  P+ 
Sbjct: 341 VGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELL----ESGLV--PDQ 394

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            TY+ II G C+EG VDKA     +M  ++  P++ T   L+ G C     ++A  L   
Sbjct: 395 TTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKT 454

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
            + +G   + V+ N I++ LC+ G+ + A  LL  M +  + P+ +T+N ++      G+
Sbjct: 455 WISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGR 514

Query: 278 INRVKELFVSMESMGCKHDD-----------------------FSYNILINGYCKNKEVE 314
           +   +E    +   G   D                         +++  IN  C   + +
Sbjct: 515 MKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYK 574

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +A+ +  E   KGI     TY +L  GL +
Sbjct: 575 DAMHMIQESTQKGIILHKSTYISLMEGLIK 604


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+ +L CL +      V+ +F+     GLF D   Y+IL +  CK+G+V     +   + 
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                 ++  +T+LI G   + + +EA +LF +++  G +P+V+ YN L  G  R     
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A++L   M +   E      PN+ T+ III+GLC  G V++A+E F  +K E++  +V 
Sbjct: 488 EAMDLLNYMESQGVE------PNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVE 541

Query: 194 TYTSLIHGFCHA------NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            YT+L++G+C A      ++  EA  LL  M++  ++P+ V  + I   LC NG M+ A 
Sbjct: 542 IYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAH 601

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L +L +     P+A TY  +++G+C T  +    ELF  M+  G   D  +Y I+INGY
Sbjct: 602 TLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGY 661

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           CK   + EA  L+ ++  +GIKP V+ Y  +  GL      E A +L+ EM
Sbjct: 662 CKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFA 78
            C+++N   + +  L +   ++ + P++ +++ LIN   K  +V +   +F R       
Sbjct: 163 ACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLI 222

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
            N  T+T +IK LC +        +F ++K  G + +   Y T I GLC+   + +   +
Sbjct: 223 FNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAV 282

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
            ++    N  +      +   Y+ +I G C E  +D+A+ +FL+M+ + L P+V  Y +L
Sbjct: 283 LQDYRTRNAHV------HKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCAL 336

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +HG+C++ ++++A  +   M+ +G++ N V  + I++ L + G+      + +   +  +
Sbjct: 337 VHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGL 396

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
             +   YN L D  C  GK++    +   ++SM    D   Y  LINGY    +  EA S
Sbjct: 397 FIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQS 456

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L+ E+  +G KP VV YN L  G F  R    A+ L   M+   V  ++ T++  I+GLC
Sbjct: 457 LFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLC 516

Query: 379 VRPQVR 384
              +V 
Sbjct: 517 SAGKVE 522



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 198/475 (41%), Gaps = 105/475 (22%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SFN L+  L K+   D  L LF R  S GL  + YTY+I+I   CK G       +
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 69  FGRILRS-------CFAPNV----------------------------VTFTSLIKGLCA 93
           F  +  +       C+A  +                              +T++I+G C 
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN------- 146
           E+++ EA ++F +++  G  P+V  Y  L++G C + +   AL ++K M +         
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367

Query: 147 --------GEIGVV---------FKPNTV-----TYSIIIDGLCKEGFVDKAKELFLQMK 184
                    E+G           FK + +      Y+I+ D LCK G VD A  +  ++K
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              L+ ++  YT+LI+G+       EA+ L  EM ++G +P+VV+ NV+     +N    
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL+ M    V PN+ T+  +++G C  GK+   +E F  ++    +     Y  L+
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547

Query: 305 NGYC------KNKEVEEAL-----------------------------------SLYNEL 323
           NGYC      K+ E++EA                                    +L+N  
Sbjct: 548 NGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLF 607

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              G  P  VTY  + +G  +      A +LF +M+   +  D  TY   I+G C
Sbjct: 608 IHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYC 662



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 160/351 (45%), Gaps = 20/351 (5%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
           T+ IL   +      SL +  F ++  +  F+ N+ T+TS+I+ LC  +   +  +LF  
Sbjct: 61  TFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLD 120

Query: 107 L----KAFGCEPNVITYNTLINGL--CRTGHTI-----------VALNLFKEMTNG--NG 147
           +    K   C    + +++L  G+      H +           V+ N+F E  +     
Sbjct: 121 IIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQT 180

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
              VV  PN ++++ +I+ L K   VD A  LF++ K   L  N  TYT +I   C   D
Sbjct: 181 RKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGD 240

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           W     +  EM + GV  +       +  LCKN + D    +L      +   + + Y  
Sbjct: 241 WENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTA 300

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++ GFC   K++  + +F+ ME  G   D + Y  L++GYC ++  ++AL++Y  +  +G
Sbjct: 301 VIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRG 360

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           IK   V ++ + H L E+ +A   + +F E + + +  D   Y    D LC
Sbjct: 361 IKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALC 411



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 12/260 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L     +N+     + L   + S G+ P+  T+ I+I   C  G+V      
Sbjct: 468 PDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEF 527

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIV------EAAALFTKLKAFGCEPNVITYNTL 122
           F  +       +V  +T+L+ G C  + I       EA  L   +     +P+ + Y+ +
Sbjct: 528 FNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKI 587

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
              LC  G+   A  LF      N  I   F P+ VTY+I+I+G CK   + +A ELF  
Sbjct: 588 FTALCCNGNMEGAHTLF------NLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKD 641

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK   + P+ VTYT +I+G+C  N   EA  L  +M ++G++P+V++  VI+  L  +G 
Sbjct: 642 MKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGH 701

Query: 243 MDNASRLLDLMVQCDVRPNA 262
            + A +L + M+   + P A
Sbjct: 702 TEIAFQLYNEMIDMGMTPGA 721



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M PS    S     L C   N + +   +LF      G  PD  TY+I+IN +CK   + 
Sbjct: 577 MKPSKVMYSKIFTALCC---NGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLP 633

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  +      P+ VT+T +I G C  + + EA  LF  +K  G +P+VI Y  +I
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
            GL  +GHT +A  L+ EM +     G   K
Sbjct: 694 KGLLNSGHTEIAFQLYNEMIDMGMTPGATLK 724



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 23/242 (9%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEA 211
           F+PNT  + I+      +     A   F Q+K ++  + N+ TYTS+I   C+ N   + 
Sbjct: 57  FEPNT--FKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKL 114

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L ++++D   Q      NV+ + L +                 DV  + + +N   +G
Sbjct: 115 DSLFLDIIDHSKQDPCFEINVLFDSLFEGVN--------------DVNEDHYLFNAF-NG 159

Query: 272 F---CLTGK--INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           F   C++    +  +  L  + +++    +  S+N LIN   K+ EV+ AL L+      
Sbjct: 160 FVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSF 219

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G+     TY  +   L +    E  +++F EM+   V  D+  Y TFI+GLC   +    
Sbjct: 220 GLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLG 279

Query: 387 YA 388
           YA
Sbjct: 280 YA 281


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N+LL  L +        +L   + S  + PD +TYSIL +   + G    
Sbjct: 79  HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 138

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +FG+ L++       T + L+ GLC + ++  A  +   L   G  P  + YNTLIN
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 198

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+TG    A + F +M + +       KP+ +TY+ +I+GLCK   +  A++L ++M+
Sbjct: 199 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +NP V T+ +LI  +       +   +L EM + G++PNVVS   I+N  CKNGK+ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M   DV PNA  YN ++D +   G  ++   L   M+S G      +YN+LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++ EA  + N L    + P  V+YNTL          ++AL L   M    + 
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 365 ADTCTYRTFIDGL 377
           +   TY   I GL
Sbjct: 433 STVRTYHQLISGL 445



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  + +       + +F  +    + P+  TY+ +I+   K G +  G
Sbjct: 10  APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 69

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  +++     PN +T+  L+ GLC   R+ E +AL  ++ +    P+  TY+ L +G
Sbjct: 70  FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G +   L+LF +       IG        T SI+++GLCK+G V  A+E+   +  
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   +   A     +M  + ++P+ ++ N ++N LCK  ++ N
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M    V P   T+NTL+D +  TG++ +   +   M+  G K +  SY  ++N
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++  K + P    YN +     E    ++A  L  +M+ N ++ 
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   I GLC + Q+
Sbjct: 364 SIVTYNLLIKGLCNQSQI 381



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL   L++N     +LSLF +    G+    YT SIL+N  CK G+VS+   +
Sbjct: 118 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 177

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   P  V + +LI G C    +  A + F ++K+   +P+ ITYN LINGLC+
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM + NG       P   T++ +ID   + G ++K   +  +M+   L
Sbjct: 238 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 291

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y S+++ FC      EA  +L +M  + V PN    N I++   ++G  D A  
Sbjct: 292 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 351

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M    + P+  TYN L+ G C   +I+  +E+  S+ +     D  SYN LI+  C
Sbjct: 352 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 411

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +++AL L   +   GIK TV TY+ L  GL    +      L+ +M  N+V     
Sbjct: 412 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471

Query: 369 TYRTFIDG 376
            +   ++ 
Sbjct: 472 IHNIMVEA 479



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K+        + + L + GL P    Y+ LIN +C+ G++   F  FG++  
Sbjct: 159 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 218

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+ +T+ +LI GLC   RI  A  L  +++  G  P V T+NTLI+   RTG    
Sbjct: 219 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 278

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              +  EM   NG      KPN V+Y  I++  CK G + +A  +   M ++++ PN   
Sbjct: 279 CFIVLSEMQE-NG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 332

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I  +      ++A  L+ +M   G+ P++V+ N+++  LC   ++  A  +++ + 
Sbjct: 333 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 392

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+A +YNTL+   C  G I++  +L   M   G K    +Y+ LI+G      + 
Sbjct: 393 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 452

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           E   LY ++    + P+   +N +     +     +A  L  EM
Sbjct: 453 EMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 142/297 (47%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ + + G
Sbjct: 216 MKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 274

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F++   +  +   PNVV++ S++   C   +I EA A+   +      PN   YN
Sbjct: 275 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 334

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+     G    A  L ++M + NG       P+ VTY+++I GLC +  + +A+E+ 
Sbjct: 335 AIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQISEAEEII 388

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +    L P+ V+Y +LI   C+  + ++A  L   M   G++  V + + +++ L   
Sbjct: 389 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 448

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G+++    L   M+Q +V P+   +N +++ +   G   + ++L   M      HDD
Sbjct: 449 GRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 505



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%)

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D    PN  S NV++  + + G+  +A  + D M +  V PN  TYNT++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M   G K +  +YN+L++G C+   + E  +L +E+  + + P   TY+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            GL     ++  L LF +   N V     T    ++GLC   +V   
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 174


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N  +G L +    D  L + K +   GL PD +TY++L++ FCK  +     +I
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   PN  T+T+LI G   E  I EA  +  ++   G + NV+TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++LF EM     E      P+T TY+++IDG  K   + KA EL  +MK   L
Sbjct: 394 AGEMAKAMSLFNEMLMAGLE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+ LI G CH++D  +A  +L +M+  GV+PNV     ++    +  + + A  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M+   V P+ F YN L+ G C   K+   K L V M   G K +  +Y   IN Y 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ E++ A   + ++   GI P  V Y  L  G  ++     AL  F  M    +  D  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 369 TYRTFIDGL 377
            Y   I  L
Sbjct: 628 AYSAIIHSL 636



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 185/353 (52%), Gaps = 7/353 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           S+F    S G FP L   + L+    K   + L + ++G ++ +   P+V T+T++IK  
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C    +++   + ++++   C+PN+ TYN  I GLC+TG    AL + K M         
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG----- 306

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  TY++++DG CK+    +AK +F  M    LNPN  TYT+LI GF    +  EA
Sbjct: 307 -LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +  EM+ +G++ NVV+ N ++  + K G+M  A  L + M+   + P+ +TYN L+DG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +  +  + +  EL   M++       F+Y++LI+G C + ++++A  + +++   G+KP 
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           V  Y TL     +  + E A++L   M  N V  D   Y   I GLC   +V 
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 10/382 (2%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R + PSP    ++++L+  L  +        +  ++   G+ P+++ Y  LI  + +  +
Sbjct: 445 RKLTPSP---FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
             +   +   ++ +   P++  +  LI GLC   ++ EA  L   +   G +PN  TY  
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
            IN   ++G   VA   FK+M +     G+V  PN V Y+I+I G C  G   +A   F 
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSS----GIV--PNNVIYTILIKGHCDVGNTVEALSTFK 615

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M  + L P++  Y+++IH         EA G+ ++ +  GV P+V   N +++  CK G
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
            ++ AS+L D M+   + PN   YNTL++G C  G++ + +ELF  +E      D  +Y+
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +I+GYCK+  + EA  L++E+  KGI P    Y  L  G  +    E+AL LF E Q  
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
            V +    + + ID  C   +V
Sbjct: 796 SVGS-LSAFNSLIDSFCKHGKV 816



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 193/368 (52%), Gaps = 7/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ ++  L+KN      + +F +    G+ PD++ Y+ LI+ FCK G +     +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L +   PN+V + +LI GLC    + +A  LF +++     P+V+TY+T+I+G C+
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   A  LF EM      I     P+   Y I+IDG  KEG ++KA  LF + + +++
Sbjct: 744 SGNLTEAFKLFDEM------ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 797

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++  + SLI  FC      EA+ L  +MVD+ + PN+V+  ++++   K   M+ A +
Sbjct: 798 G-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 856

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M   ++ PN  TY +L+  +   G   ++  LF  ME+ G   D  +Y ++ + YC
Sbjct: 857 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +  EAL L N+   +GIK     ++ L   L + +Q    L+L  EM   +++  + 
Sbjct: 917 KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSK 976

Query: 369 TYRTFIDG 376
           T  T + G
Sbjct: 977 TCNTLLLG 984



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 184/370 (49%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++   +   +K+         FK + S G+ P+   Y+ILI   C +G        
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P++  ++++I  L    +  EA  +F K    G  P+V  YN+LI+G C+
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK 673

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L+ EM + NG       PN V Y+ +I+GLCK G V KA+ELF +++ ++L
Sbjct: 674 EGDIEKASQLYDEMLH-NG-----INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY+++I G+C + +  EA  L  EM+ +G+ P+     ++++   K G ++ A  
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L     Q  V   +  +N+L+D FC  GK+   +ELF  M       +  +Y ILI+ Y 
Sbjct: 788 LFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 846

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + +EEA  L+ ++  + I P  +TY +L     +I    + + LF +M+   +A D  
Sbjct: 847 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAI 906

Query: 369 TYRTFIDGLC 378
            Y       C
Sbjct: 907 AYGVMASAYC 916



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 169/339 (49%), Gaps = 14/339 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+L+TY+  I   C+ G V     +   ++     P+  T+T L+ G C + R  EA  +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSI 162
           F  + + G  PN  TY  LI+G  + G+   AL +  EM T G        K N VTY+ 
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG-------LKLNVVTYNA 386

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G+ K G + KA  LF +M    L P+  TY  LI G+  ++D  +A  LL EM  + 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P+  + +V+++ LC +  +  A+ +LD M++  V+PN F Y TL+  +    +     
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT---LF 339
           EL   M + G   D F YN LI G C+ K+VEEA  L  ++  KGIKP   TY     L+
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               EI+ AER  K   +M  + +  +   Y   I G C
Sbjct: 567 SKSGEIQVAERYFK---DMLSSGIVPNNVIYTILIKGHC 602



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 11/328 (3%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P +  +N L+  L K         LF  +    L PD+ TYS +I+ +CK G ++  F +
Sbjct: 694  PNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF--TKLKAFGCEPNVITYNTLINGL 126
            F  ++    +P+   +  LI G   E  + +A +LF   + K+ G   ++  +N+LI+  
Sbjct: 754  FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSF 810

Query: 127  CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            C+ G  I A  LF +M +          PN VTY+I+ID   K   +++A++LFL M+  
Sbjct: 811  CKHGKVIEARELFDDMVDKK------LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 864

Query: 187  NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            N+ PN +TYTSL+  +    +  +   L  +M  +G+  + ++  V+ +  CK GK   A
Sbjct: 865  NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 924

Query: 247  SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +LL+  +   ++     ++ L+   C   +I+ V EL   M          + N L+ G
Sbjct: 925  LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 984

Query: 307  YCKNKEVEEALSLYNELPFKGIKPTVVT 334
            + K+   +EA  +   +   G  PT ++
Sbjct: 985  FYKSGNEDEASKVLGVMQRLGWVPTSLS 1012



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 159 TYSIIIDGLCKEGFVDKAK---ELFLQMKYENLN--------------PNVVTYTSLIHG 201
           +YSI+   LC  G + +A    E  LQ +   L                N+  +   I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F      NEA  + I  + +G  P ++  N +M +L K   M    ++   MV+  + P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            +TY  ++   C  G + + K +   ME   CK + F+YN  I G C+   V+EAL +  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            +  KG+ P   TY  L  G  + ++++ A  +F  M  + +  +  TY   IDG
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDG 355


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 193/368 (52%), Gaps = 32/368 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + +FNI++    K         + K +++ G+ P + TY+ LI+ +CK GQV   +  
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++++  +P+VVTF  LI G C E  I  A  +F +++  G   NV+TYN+L++G
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305

Query: 126 LCRTGHTIVALNLFKEMT---------------NGNGEIGVV--------------FKPN 156
           LCR G    ++ L +EM                NG  + G++               KPN
Sbjct: 306 LCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            +TY+ ++DG  + G + +A      M  + ++PNV TY  LI GF  + DW    GLL 
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM ++GV+ +VV+ NV++  LC  G++  A +LLD MV+  + P    YNT+++GFC  G
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG 485

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
                 E+ + ME    + +  +YN+ +  +CK  +++EA  + NE+  KG+ P  +TY 
Sbjct: 486 DAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 545

Query: 337 TLFHGLFE 344
            +  G+ E
Sbjct: 546 IINSGMIE 553



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 188/373 (50%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL  L +    D     F+      + PDL+T++I+I+ FCK GQ+     +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI---VEAAALFTKLKAFGCEPNVITYNTLING 125
              I     AP+V T+ +LI G C   ++       AL  ++   G  P+V+T+N LING
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+  +   A+ +F+EM             N VTY+ ++ GLC+EG V+ + +L  +M+ 
Sbjct: 271 YCKEPNITAAIKVFQEMRQQG------IPANVVTYNSLVSGLCREGKVEDSIKLVEEMEE 324

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L   + T  S+++GFC      EA+G +  +  +G++PNV++ N +++   + GKM  
Sbjct: 325 LGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKE 384

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+   D M    + PN  TYN L+ GF  +     V  L   M+  G K D  +YN+LI 
Sbjct: 385 AAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIG 444

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             C   EV +A+ L +E+   G++P  V YNT+ +G  E   A+ A ++ + M+     A
Sbjct: 445 ALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRA 504

Query: 366 DTCTYRTFIDGLC 378
           +  TY  F+   C
Sbjct: 505 NVVTYNVFLKYFC 517



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 9/311 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           + P+  +  +L+  L    R+  A   F         P++ T+N +I+G C+TG    A 
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAG 208

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK---AKELFLQMKYENLNPNVV 193
           ++ K ++      GV   P+  TY+ +IDG CK G V K      L  +M    ++P+VV
Sbjct: 209 DVAKNIS----AWGVA--PSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVV 262

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+  LI+G+C   +   A  +  EM  QG+  NVV+ N +++ LC+ GK++++ +L++ M
Sbjct: 263 TFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEM 322

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +     T N++++GFC  G +   +     +   G K +  +YN L++GY +  ++
Sbjct: 323 EELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKM 382

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA +  + +  KGI P V TYN L  G    R       L  EM+   V AD  TY   
Sbjct: 383 KEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVL 442

Query: 374 IDGLCVRPQVR 384
           I  LC + +VR
Sbjct: 443 IGALCCKGEVR 453



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 148/346 (42%), Gaps = 85/346 (24%)

Query: 9   PPVSSFNILL------GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V+++N L+      G + K  H D   +L K +   G+ PD+ T+++LIN +CK   +
Sbjct: 221 PSVATYNTLIDGYCKRGQVGKMYHVD---ALLKEMIQAGISPDVVTFNVLINGYCKEPNI 277

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------- 97
           +    +F  + +     NVVT+ SL+ GLC E ++                         
Sbjct: 278 TAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSV 337

Query: 98  ----------VEAAALFTKLKAFGCEPNVITYNTLINGLCR------------------- 128
                     VEA      +   G +PNVITYNTL++G  R                   
Sbjct: 338 LNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGI 397

Query: 129 -----------TGHTIV-----ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
                      TG T          L  EM     E GV  K + VTY+++I  LC +G 
Sbjct: 398 SPNVKTYNCLITGFTTSRDWRSVSGLLDEMK----EKGV--KADVVTYNVLIGALCCKGE 451

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V KA +L  +M    L P  V Y ++I+GFC   D   A  + + M  +  + NVV+ NV
Sbjct: 452 VRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNV 511

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
            +   CK GKMD A+ +L+ M++  + PN  TY  +  G    G +
Sbjct: 512 FLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYV 557



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+ P++ TY+ L++ + ++G++         +     +PNV T+  LI G          
Sbjct: 361 GMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSV 420

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
           + L  ++K  G + +V+TYN LI  LC  G    A+ L  EM     E+G   +P  V Y
Sbjct: 421 SGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMV----EVG--LEPKHVAY 474

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + II+G C++G    A E+ L+M+      NVVTY   +  FC     +EA  +L EM++
Sbjct: 475 NTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLE 534

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +G+ PN ++  +I + + + G + + S
Sbjct: 535 KGLVPNRITYEIINSGMIEKGYVPDIS 561



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 38/90 (42%)

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           FS N L+    +   V+ A   +     + + P + T+N +  G  +  Q  +A  +   
Sbjct: 154 FSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKN 213

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +    VA    TY T IDG C R QV   Y
Sbjct: 214 ISAWGVAPSVATYNTLIDGYCKRGQVGKMY 243


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L+L++ + + G+ P + +++ ++  FCK G++S        +L+    P+++++ +LI G
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C    I EA  L  +L+      N++TYNTLI+GLCR G    AL L ++M N      
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG---- 442

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ VTY+++++G CK G +  AKE F +M +  L P+   YT+ I G     D  +
Sbjct: 443 --IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L  EM+ +G  P+V++ NV +N LCK G ++ A  LL  M++    P+  TY + M 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
                G +   +E+F  M S G      +Y +LI+ +  N  ++ A++ + E+  KG+ P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V+TYN L +G  ++R+ ++A K F+EMQ   +  +  TY   I+  C
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 189/367 (51%), Gaps = 8/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L         L +++ +   G+ P + TY+ +++ FCK G+V     +
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             ++  R C+ P+ VTF  LI GL  +  + +A  L  ++   G   +  TYN LI G C
Sbjct: 260 VPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYC 318

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + AL L++EM       GV   P   +++ I+ G CKEG +  A++    M  +N
Sbjct: 319 KKGLLVEALALWEEMVTR----GV--SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN 372

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P++++Y +LI+GFC   +  EA  LL E+  + +  N+V+ N +++ LC+ G ++ A 
Sbjct: 373 LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETAL 432

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L + M+   + P+  TY  L++G C  G +   KE F  M  +G   D F+Y   I G 
Sbjct: 433 KLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGE 492

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +  +A  L  E+  KG  P V+TYN   +GL ++   E A +L  +M  +    D 
Sbjct: 493 LKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDH 552

Query: 368 CTYRTFI 374
            TY +F+
Sbjct: 553 VTYTSFM 559



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 179/364 (49%), Gaps = 31/364 (8%)

Query: 9   PPVSSFN-ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V+S N I+ G   + K  D    L   L    L PD+ +Y+ LI  FC++G +   F+
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKK-NLMPDIISYNTLIYGFCRLGNIGEAFI 398

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +     + N+VT+ +LI GLC    +  A  L   +   G  P+V+TY  L+NG C
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458

Query: 128 RTGHTIVALNLFKEMTN---------------GNGEIGVV--------------FKPNTV 158
           + G+ ++A   F EM +               G  ++G                F P+ +
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVI 518

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY++ ++GLCK G +++A EL  +M  +   P+ VTYTS +H         E + +  +M
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G  P VV+  V+++    NG++D A      M +  V PN  TYN L++GFC   K+
Sbjct: 579 LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++  + F+ M+  G   + ++Y ILIN  C   + +EAL LY ++  K I+P   T+  L
Sbjct: 639 DQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGAL 698

Query: 339 FHGL 342
              L
Sbjct: 699 LKKL 702



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 170/314 (54%), Gaps = 12/314 (3%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++F +++R+ F P+V     ++K L  ++ +V+A  ++  +  +G  P V TYNT+++ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    AL+L  +M     E G    P+ VT++++I+GL K+G + +AK L  +M  
Sbjct: 247 FCKGGEVQRALDLVPKMQ----ERGCY--PSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L  +  TY  LI G+C      EA  L  EMV +GV P V S N IM   CK GKM +
Sbjct: 301 AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF---SYNI 302
           A + L  M++ ++ P+  +YNTL+ GFC  G I    E F+ ++ +  ++  F   +YN 
Sbjct: 361 ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG---EAFILLDELRFRNLSFNIVTYNT 417

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G C+  ++E AL L  ++  +GI P VVTY  L +G  ++     A + F EM    
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 363 VAADTCTYRTFIDG 376
           +A D   Y   I G
Sbjct: 478 LAPDQFAYTARIVG 491



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 6/304 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N L+  L +    +T L L + + + G+ PD+ TY++L+N  CK+G + +    F 
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L    AP+   +T+ I G        +A  L  ++   G  P+VITYN  +NGLC+ G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  L ++M   +G +     P+ VTY+  +    + G + + +E+F  M      P
Sbjct: 532 NLEEAGELLQKMIR-DGHV-----PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            VVTYT LIH        + A    +EM ++GV PNV++ NV++N  CK  KMD A +  
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  + PN +TY  L++  C  GK      L+  M     + D  ++  L+    K+
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKD 705

Query: 311 KEVE 314
            +V+
Sbjct: 706 YKVQ 709



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 6/265 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+V   N ++  L      + AL +++ M    GE G+  +P   TY+ ++   CK G V
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMM----GEYGI--RPTVTTYNTMLHSFCKGGEV 253

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
            +A +L  +M+     P+ VT+  LI+G     +  +AKGL+ EM   G++ +  + N +
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +   CK G +  A  L + MV   V P   ++NT+M GFC  GK++  ++    M     
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  SYN LI G+C+   + EA  L +EL F+ +   +VTYNTL  GL  +   E ALK
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALK 433

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
           L  +M    +  D  TY   ++G C
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGAC 458



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 6/224 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ TY++ +N  CK+G +     +  +++R    P+ VT+TS +        + E 
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREG 571

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +F  + + G  P V+TY  LI+     G    A+  F EM     E GVV  PN +TY
Sbjct: 572 REIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQ----EKGVV--PNVITY 625

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +++I+G CK   +D+A + F++M+ + + PN  TYT LI+  C+   W EA  L  +M+ 
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           + ++P+  +   ++ +L K+ K+     +  L++  D   +A T
Sbjct: 686 KRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 6/192 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N+ +  L K  + +    L +++   G  PD  TY+  ++   + G +  G  
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +L     P VVT+T LI       R+  A A F +++  G  PNVITYN LING C
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A   F EM     E G+   PN  TY+I+I+  C  G   +A  L+ QM  + 
Sbjct: 634 KVRKMDQACKFFIEMQ----EKGIF--PNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687

Query: 188 LNPNVVTYTSLI 199
           + P+  T+ +L+
Sbjct: 688 IRPDSCTHGALL 699



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+    K +  D     F  +   G+FP+ YTY+ILIN  C MG+      +
Sbjct: 620 PNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRL 679

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRI 97
           + ++L     P+  T  +L+K L  + ++
Sbjct: 680 YAQMLGKRIRPDSCTHGALLKKLDKDYKV 708



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +AL +Y  +   GI+PTV TYNT+ H   +  + +RAL L  +MQ         T+   I
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 375 DGLCVRPQVR 384
           +GL  + +++
Sbjct: 280 NGLSKKGELQ 289


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+S N+ L  L   K Y+  L LF  +   GL PD + Y   I    K+G +     +
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R   +P V  +  +I GLC E R+ +A  LF ++      PN ITYNTLI+G C+
Sbjct: 205 MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A N+ + M   N E      P  +T++ +++GLC+   +++A+ +  +M+    
Sbjct: 265 VGQLEEAFNIRERMKVENVE------PTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGF 318

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT+L  G     + + +  L  E V +GVQ    + ++++N LCK G M+ A  
Sbjct: 319 VPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEE 378

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L   ++  + P    +NT+++G+C  G IN+       ME++G + +  +YN L+  +C
Sbjct: 379 VLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFC 438

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + K +EEA     ++  KG+ P V TYNTL  G       +R  ++  EM+   +  +  
Sbjct: 439 EMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVI 498

Query: 369 TYRTFIDGLC 378
           +Y   I+ LC
Sbjct: 499 SYGCLINCLC 508



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+++G L K K       LF  +    + P+  TY+ LI+ +CK+GQ+   F I
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P ++TF SL+ GLC    + EA  +  +++ +G  P+  TY TL +G  +
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   ++ L +E      +I         T SI+++ LCKEG ++KA+E+  +     L
Sbjct: 335 CGNVDASITLSEEAVRKGVQI------LDYTCSILLNALCKEGNMEKAEEVLKKFLENGL 388

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  V + ++++G+C   D N+A   + +M   G++PN V+ N ++ + C+   M+ A +
Sbjct: 389 APVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEK 448

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  MV+  V PN  TYNTL+DG+  +   +R  ++   ME  G K +  SY  LIN  C
Sbjct: 449 CIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLC 508

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  + EA  +  ++  +G+ P    YN L  G     + + A + F EM   ++     
Sbjct: 509 KDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLV 568

Query: 369 TYRTFIDGLCVRPQV 383
           TY   I+GLC + +V
Sbjct: 569 TYNILINGLCKKGKV 583



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 41/368 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY------------------- 49
           P + +FN LL  L + +  +    + + +   G  PD +TY                   
Sbjct: 285 PTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITL 344

Query: 50  ----------------SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                           SIL+N  CK G +     +  + L +  AP  V F +++ G C 
Sbjct: 345 SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQ 404

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              I +A     K++A G  PN +TYN+L+   C   +   A    K+M     E GV+ 
Sbjct: 405 VGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV----EKGVL- 459

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN  TY+ +IDG  +    D+  ++  +M+ + L PNV++Y  LI+  C   +  EA+ 
Sbjct: 460 -PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L +MV +GV PN    N++++  C  GK+ +A R  D MV  ++ P   TYN L++G C
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+   + L   +   G   D  +YN LI+GY     V++AL LY  +   GIKPT+ 
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638

Query: 334 TYNTLFHG 341
           TY+ L  G
Sbjct: 639 TYHRLIAG 646



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 9/360 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    ++  +D    + + +   GL P++ +Y  LINC CK   +    VI
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G ++     PN   +  LI G C   ++ +A   F ++ A    P ++TYN LINGLC+
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A NL  E+T      G+ F  + +TY+ +I G    G V KA EL+  MK   +
Sbjct: 580 KGKVMEAENLASEITRK----GLSF--DVITYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + TY  LI G C        + +  EM+   + P+ V  N +++   ++G +  A  
Sbjct: 634 KPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    ++P+  TYN L+ G    G++++VK L   M+  G      +Y+ILI G+C
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K K+ + A   Y E+   G  P+V   + L  GL E  ++  A  +  EM  N    D C
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM--NMKGKDDC 810



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 183/398 (45%), Gaps = 40/398 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K  + +    + K+    GL P    ++ ++N +C++G ++  +    ++  
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN VT+ SL+K  C    + EA     K+   G  PNV TYNTLI+G  R+     
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              + +EM           KPN ++Y  +I+ LCK+  + +A+ +   M +  + PN   
Sbjct: 481 CFQILEEMEKKG------LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQI 534

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  LI G C A    +A     EMV + + P +V+ N+++N LCK GK+  A  L   + 
Sbjct: 535 YNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEIT 594

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH------------------- 295
           +  +  +  TYN+L+ G+   G + +  EL+ +M+  G K                    
Sbjct: 595 RKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL 654

Query: 296 ---------------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                          D   YN LI+ Y ++ +V++A SL++ +  +GI+P  +TYN L  
Sbjct: 655 VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLIL 714

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G F+  +  +   L  +M+   +   T TY   I G C
Sbjct: 715 GHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    + K+ +      K++   G+ P++ TY+ LI+ + +       F I
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    PNV+++  LI  LC ++ I+EA  +   +   G  PN   YN LI+G C 
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCI 544

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F EM      +     P  VTY+I+I+GLCK+G V +A+ L  ++  + L
Sbjct: 545 AGKLKDAFRFFDEM------VAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + +V+TY SLI G+  A +  +A  L   M   G++P + + + ++    K G +    +
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEK 657

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+Q ++ P+   YN L+  +   G + +   L  +ME+ G + D  +YN LI G+ 
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + +  +L N++  +G+ P   TY+ L  G  +++  + A   + EM  N       
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777

Query: 369 TYRTFIDGL 377
                I GL
Sbjct: 778 ICDNLITGL 786



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 147/304 (48%), Gaps = 13/304 (4%)

Query: 79  PNVVTFTSLIKGLCAESRIV-EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           P    F+ ++  +C+ES++V E+A L+  +K  G  P+V + N  +  L  T      L 
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF E+           +P+   Y   I    K G + +A EL   MK   ++P V  Y  
Sbjct: 169 LFSEIVESG------LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNV 222

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I G C      +A+ L  EM+D+ V PN ++ N +++  CK G+++ A  + + M   +
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P   T+N+L++G C    +   + +   ME  G   D F+Y  L +G+ K   V+ ++
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +L  E   KG++    T + L + L +   + +AE  LK F+E   N +A     + T +
Sbjct: 343 TLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLE---NGLAPVGVFFNTIV 399

Query: 375 DGLC 378
           +G C
Sbjct: 400 NGYC 403



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 1/126 (0%)

Query: 260 PNAFTYNTLMDGFCLTGK-INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           P    ++ ++   C   K ++   EL++ M+  G      S N+ +      K  E+ L 
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L++E+   G++P    Y        ++   +RA++L   M+   V+     Y   I GLC
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228

Query: 379 VRPQVR 384
              +++
Sbjct: 229 KEKRMK 234


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 199/380 (52%), Gaps = 16/380 (4%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-- 72
           N LL  LA+  +++ +  L +++  + + P++ T+ ILIN  CK  +V     +  ++  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 73  ------LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF-GCEPNVITYNTLING 125
                 +     P+VV + +LI GLC   R  E   L  ++++  GC P+ ITYN LI+G
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G       LF EM   N E GV   PN VT + ++ G+C+ G V  A   F++ + 
Sbjct: 429 FCKAGEIEKGKELFDEM---NKE-GVA--PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR 482

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             +  + VTYT+LI+ FC+ N++ +A  L  EM+  G  P+ +    +++   + G+M +
Sbjct: 483 RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS +L  + +  +RP+   YNTL+ GFC T K +RV E+   ME  G K D  +YN LI 
Sbjct: 543 ASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIA 602

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVA 364
              KN +++ A  +  ++   G+ PTV TY  + +          A+++F +M+  + V 
Sbjct: 603 YASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVP 662

Query: 365 ADTCTYRTFIDGLCVRPQVR 384
            +T  Y   I+ LC   +V+
Sbjct: 663 PNTVIYNILINSLCKNNKVK 682



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 15/379 (3%)

Query: 11  VSSFNI--LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           +SSF +  L+  L +N+  +    LF  +  +G   +    + L+    + G  +    +
Sbjct: 268 ISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNEL 327

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK--------AFGCEPNVITYN 120
             +++     PNVVTF  LI  +C   R+ +A  +  K+         +   EP+V+ YN
Sbjct: 328 MEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYN 387

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+GLC+ G     L L + M +  G       P+T+TY+ +IDG CK G ++K KELF
Sbjct: 388 TLIDGLCKVGRQQEGLGLMERMRSQKG-----CAPDTITYNCLIDGFCKAGEIEKGKELF 442

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  E + PNVVT  +L+ G C     + A    +E   +G++ + V+   ++N  C  
Sbjct: 443 DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
              + A  L + M++    P+A  Y TL+ GF   G++     +   ++ +G + D   Y
Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCY 562

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI G+C+  +      +  E+   G+KP  +TYNTL     +    + A K+  +M  
Sbjct: 563 NTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIK 622

Query: 361 NDVAADTCTYRTFIDGLCV 379
             V     TY   I+  C+
Sbjct: 623 AGVVPTVATYGAVINAYCL 641



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D +++L  +    G+    +    LI   C+  + + G+ +F  +++           SL
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG-- 145
           + GL  E        L  K+     +PNV+T+  LIN +C+      AL + ++M+ G  
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPNVVTYTSLIHGFCH 204
           +G I V  +P+ V Y+ +IDGLCK G   +   L  +M+ +    P+ +TY  LI GFC 
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A +  + K L  EM  +GV PNVV+ N ++  +C+ G++ +A        +  ++ +A T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y  L++ FC      +  ELF  M   GC  D   Y  LI+G+ +   + +A  +  EL 
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             GI+P  V YNTL  G     +  R  ++  EM+   +  DT TY T I
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 34/391 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V  +N L+  L K       L L +R+ S  G  PD  TY+ LI+ FCK G++  G  
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  + +   APNVVT  +L+ G+C   R+  A   F + +  G + + +TY  LIN  C
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVF----------------------------KPNTV 158
              +   A+ LF EM  +G     +V+                            +P+TV
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+ +I G C+     +  E+  +M+   L P+ +TY +LI       D   A+ ++ +M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +  GV P V +   ++N  C NG  + A  +  D+     V PN   YN L++  C   K
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +     L   M+  G   +  +YN +  G    K++E+     + +      P  +T   
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           L   L  + + ER LK FV   G +V++ T 
Sbjct: 741 LTEWLSAVGEIER-LKKFV--AGCEVSSSTA 768



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 131/313 (41%), Gaps = 49/313 (15%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAA-ALFTKLKAFGCEPNVI-TY--NTLINGLCRTGHTIV 134
           P  V   S +      S +VE +  LF  L     +P+V  TY  N  ++ L R+G    
Sbjct: 154 PLTVNAASFLLRASGRSELVEESLILFNDL-----DPSVKNTYLRNVWLSILLRSGRVKD 208

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL +  EM   N +     +PN  T  I+   L K    ++ +EL  + +  NL   V+ 
Sbjct: 209 ALKVIDEMFESNDDSNC--RPNDATGDILFSFLLKR---ERNEELLSEDEIVNL---VLK 260

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           +    HG   ++ W    G LI                    LC+N K +    L   M+
Sbjct: 261 FGE--HGVLISSFW---MGRLI------------------TRLCRNRKTNRGWDLFTEMI 297

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +      +   N+L+ G    G  NR+ EL   M  M  + +  ++ ILIN  CK + V+
Sbjct: 298 KLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVD 357

Query: 315 EALSLYNELP--------FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND-VAA 365
           +AL +  ++            ++P VV YNTL  GL ++ + +  L L   M+     A 
Sbjct: 358 DALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAP 417

Query: 366 DTCTYRTFIDGLC 378
           DT TY   IDG C
Sbjct: 418 DTITYNCLIDGFC 430


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N+LL  L +        +L   + S  + PD +TYSIL +   + G    
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +FG+ L++       T + L+ GLC + ++  A  +   L   G  P  + YNTLIN
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+TG    A + F +M + +       KP+ +TY+ +I+GLCK   +  A++L ++M+
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +NP V T+ +LI  +       +   +L EM + G++PNVVS   I+N  CKNGK+ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M   DV PNA  YN ++D +   G  ++   L   M+S G      +YN+LI
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++ EA  + N L    + P  V+YNTL          ++AL L   M    + 
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 365 ADTCTYRTFIDGL 377
           +   TY   I GL
Sbjct: 481 STVRTYHQLISGL 493



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  + +       + +F  +    + P+  TY+ +I+   K G +  G
Sbjct: 58  APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  +++     PN +T+  L+ GLC   R+ E +AL  ++ +    P+  TY+ L +G
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G +   L+LF +       IG        T SI+++GLCK+G V  A+E+   +  
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEVLQSLVN 231

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   +   A     +M  + ++P+ ++ N ++N LCK  ++ N
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 291

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M    V P   T+NTL+D +  TG++ +   +   M+  G K +  SY  ++N
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++  K + P    YN +     E    ++A  L  +M+ N ++ 
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   I GLC + Q+
Sbjct: 412 SIVTYNLLIKGLCNQSQI 429



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL   L++N     +LSLF +    G+    YT SIL+N  CK G+VS+   +
Sbjct: 166 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 225

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   P  V + +LI G C    +  A + F ++K+   +P+ ITYN LINGLC+
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM + NG       P   T++ +ID   + G ++K   +  +M+   L
Sbjct: 286 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 339

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y S+++ FC      EA  +L +M  + V PN    N I++   ++G  D A  
Sbjct: 340 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 399

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M    + P+  TYN L+ G C   +I+  +E+  S+ +     D  SYN LI+  C
Sbjct: 400 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 459

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +++AL L   +   GIK TV TY+ L  GL    +      L+ +M  N+V     
Sbjct: 460 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519

Query: 369 TYRTFID 375
            +   ++
Sbjct: 520 IHNIMVE 526



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 170/360 (47%), Gaps = 10/360 (2%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAP 79
           L+  +H D V   F  L S G  PD + ++  +      G +     +  R+ R     P
Sbjct: 3   LSLGRHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N  ++  +I G+    R  +A  +F ++      PN ITYNT+I+G  + G       L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 140 KEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
            +M  +G        KPN +TY++++ GLC+ G + +   L  +M  + + P+  TY+ L
Sbjct: 122 DQMVCHG-------LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 174

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
             G     D      L  + +  GV     + ++++N LCK+GK+  A  +L  +V   +
Sbjct: 175 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 234

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            P    YNTL++G+C TG++      F  M+S   K D  +YN LING CK + +  A  
Sbjct: 235 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 294

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  E+   G+ PTV T+NTL        Q E+   +  EMQ N +  +  +Y + ++  C
Sbjct: 295 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 354



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K+        + + L + GL P    Y+ LIN +C+ G++   F  FG++  
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 266

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+ +T+ +LI GLC   RI  A  L  +++  G  P V T+NTLI+   RTG    
Sbjct: 267 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              +  EM   NG      KPN V+Y  I++  CK G + +A  +   M ++++ PN   
Sbjct: 327 CFIVLSEMQE-NG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 380

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I  +      ++A  L+ +M   G+ P++V+ N+++  LC   ++  A  +++ + 
Sbjct: 381 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 440

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+A +YNTL+   C  G I++  +L   M   G K    +Y+ LI+G      + 
Sbjct: 441 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 500

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           E   LY ++    + P+   +N +     +     +A  L  EM
Sbjct: 501 EMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 142/297 (47%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ + + G
Sbjct: 264 MKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F++   +  +   PNVV++ S++   C   +I EA A+   +      PN   YN
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+     G    A  L ++M + NG       P+ VTY+++I GLC +  + +A+E+ 
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQISEAEEII 436

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +    L P+ V+Y +LI   C+  + ++A  L   M   G++  V + + +++ L   
Sbjct: 437 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 496

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G+++    L   M+Q +V P+   +N +++ +   G   + ++L   M      HDD
Sbjct: 497 GRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 553


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 181/333 (54%), Gaps = 8/333 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S+N LL  L K K      ++F  + S   + PD+ +YSILI+ FCK+ ++     ++ +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           ++     PNV T+ + + GL  + RI +A  ++ ++ + GC P+VITY+TLI+G      
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  LF+ M      I    +PN VTY+ ++ GLCKE   D+A ELF +M     +P+
Sbjct: 243 HDQAHELFEAM------ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTYT+L++GFC+     +A  +  EMV +G  P+VV+ N ++    + GK   A +L  
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES-MGCKHDDFSYNILINGYCKN 310
           +MV  + +P+  ++N ++DG     +++   E+F  ME   GC  D  +YN LI G C  
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           + + EA+ ++ E+    + P    +N L   ++
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 193/362 (53%), Gaps = 10/362 (2%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR--SCFA 78
           L K    D+ LSL + +   G  PD+ T+S+LIN  CK  ++         + R  S  A
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
            +  ++ SL+  LC   ++ +A A+F T +      P+V++Y+ LI+G C+      A  
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L+K+M + N        PN  TY+  ++GL ++G +  A+ ++ +M     +P+V+TY++
Sbjct: 179 LYKQMIDLN------CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LIHGF  A   ++A  L   M+ +G +PN V+ N +++ LCK  K D A  L   MV+  
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             P+  TY TL+ GFC  GKI +  E+F  M S G   D  +YN L+ G+ +  +  EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDG 376
            L+  +  +  KP  V++N +  GL + ++ + A+++F  M Q +  + D  TY + I G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 377 LC 378
           LC
Sbjct: 413 LC 414



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 183/373 (49%), Gaps = 10/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI--GLFPDLYTYSILINCFCKMGQVSLGF 66
           P +++ ++L+  L K           + +N          ++Y+ L+N  CK  +V   F
Sbjct: 82  PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAF 141

Query: 67  VIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            IF  ++      P+VV+++ LI G C    +  A  L+ ++    C PNV TYN  +NG
Sbjct: 142 AIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 201

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G    A  +++EM      I     P+ +TYS +I G       D+A ELF  M  
Sbjct: 202 LMRKGRIADAQGVYEEM------ISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMIS 255

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN VTY  L+HG C  +  +EA  L  +MV++G  P+ V+   ++   C  GK++ 
Sbjct: 256 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQ 315

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  + D MV     P+   YN L+ GF   GK    ++LF  M S  CK D  S+NI+I+
Sbjct: 316 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMID 375

Query: 306 GYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           G  K K +++A+ ++  +    G  P +VTYN+L  GL   ++   A+K+F E+    ++
Sbjct: 376 GLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 435

Query: 365 ADTCTYRTFIDGL 377
            D   +   ++ +
Sbjct: 436 PDPHAFNVLLEAM 448



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 15/332 (4%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL---- 107
           +I   CK G+V     +   +++  + P++ T + LI  LC   +I EA      +    
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 108 --KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
             +A  C     +YN+L+N LC+      A  +F  M +   E  VV  P+ V+YSI+ID
Sbjct: 115 STRASSC----FSYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYSILID 165

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           G CK   + +A++L+ QM   N  PNV TY + ++G        +A+G+  EM+  G  P
Sbjct: 166 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSP 225

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +V++ + +++      K D A  L + M+    RPNA TYN L+ G C   K +   ELF
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   GC  D  +Y  L+ G+C   ++E+A+ +++E+  KG  P VV YN L  G F  
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +   A +LF  M   +   DT ++   IDGL
Sbjct: 346 GKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 7/269 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N  L  L +         +++ + S G  PD+ TYS LI+ F    +      +
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN VT+  L+ GLC ES+  EA  LF K+   GC+P+ +TY TL+ G C 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +F EM +   +      P+ V Y+ ++ G  + G   +A++LF  M     
Sbjct: 310 VGKIEQAVEVFDEMVSKGHD------PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+ V++  +I G   A   ++A  +   M  D G  P++V+ N ++  LC   ++  A 
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           ++   + +  + P+   +N L++     G
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 41/264 (15%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV---TYTSLIHGFCHANDWNEAK 212
           N V ++  + GLCK G +++A E    M+    +       T  S+I   C A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD--------------------- 251
            LL  M+ +G  P++ + ++++NELCK  K+  A   L                      
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 252 -----------------LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
                            ++ +  V P+  +Y+ L+DGFC   ++ R ++L+  M  + C 
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +YN  +NG  +   + +A  +Y E+   G  P V+TY+TL HG    R+ ++A +L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F  M       +  TY   + GLC
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLC 273



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL    +         LF+ + S    PD  +++I+I+   K  ++     +
Sbjct: 330 PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEV 389

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F R+ +   C +P++VT+ SLI GLC E R+ EA  +F ++      P+   +N L+  +
Sbjct: 390 FERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448

Query: 127 CRTGH 131
              GH
Sbjct: 449 YAAGH 453


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    +       L+LF R+   G+ P + TY+ L+  +CK G +     +
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKL 458

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +    F PNVVT+ +L++G  A+     A AL  ++K  G   N  TYN LING+C 
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM 518

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                    + K  M+ G       F P  +TY+ II+G  K G +  A  ++ QM+ + 
Sbjct: 519 VDRVCEVDGMLKSFMSEG-------FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN++TYTS I G+C     + A  +L ++  +G+QP++V+ N ++N  C+ G M +A 
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL ++++  + PN   YN+L+ G+     +  V + + SM   G   D  +Y  LI+G+
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGF 691

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K+  V  AL LY+E+  KG  P   T+  L HGL      + A KL  EM+  DV  + 
Sbjct: 692 SKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNV 751

Query: 368 CTYRTFIDG 376
             Y   I+G
Sbjct: 752 FIYNMLING 760



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 172/336 (51%), Gaps = 7/336 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V+   ++ G +AK K +D   +L   +   G+  + YTY++LIN  C + +V     
Sbjct: 469 PNVVTYITLMRGYIAK-KDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +    +   F P ++T+ S+I G      +  A  ++ +++  G  PN+ITY + I+G C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           RTG + +AL +  ++           +P+ V Y+ +I+G C+EG +  A +L + +  + 
Sbjct: 588 RTGCSDMALKMLNDVRRRG------LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN V Y SLI G+ + N   E       M+  G+  +  +   +++   K+G +  A 
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M+     P+AFT+  L  G C +G I+  K+L   M  +  + + F YN+LINGY
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
            ++ +++EA  L++E+   GI+P   TY+ L    F
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 168/354 (47%), Gaps = 7/354 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L +++   GL P  +  S+++       +      +F  +  S   P+V T+ +LI   C
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHC 412

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              ++ EA  LF ++K  G +P++ TYN+L+ G C+ G    A+ L+ EM          
Sbjct: 413 QAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG------ 466

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           FKPN VTY  ++ G   +   D A  L  +MK   ++ N  TY  LI+G C  +   E  
Sbjct: 467 FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVD 526

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           G+L   + +G  P +++ N I+N   K G M +A  +   M +  + PN  TY + +DG+
Sbjct: 527 GMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C TG  +   ++   +   G + D  +YN LING+C+   +  AL L   L   G+ P  
Sbjct: 587 CRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           V YN+L  G   +   +   K +  M    + ADT TY T IDG      V F 
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 7/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S   LL   A+       L+LF  +   G   D + +  L++   K G       +
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   P+   +   I  LC       A  +  ++K  G +    TY T+++ L +
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    AL +  EM +   ++ V+        + ++ G C    V  A  LF +   + +
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVA------TTLMRGYCLRQEVGNALNLFKETLKDGI 328

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  V Y  LI G        +A  L  +M  QG+ P+    ++++  L  + +  +A  
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVC 388

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    + P+ FTYN L+   C   K+     LF  M+  G K    +YN L+ GYC
Sbjct: 389 LFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC 447

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA+ LY+E+P +G KP VVTY TL  G    +  + A  L  EM+ N V+ +  
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507

Query: 369 TYRTFIDGLCVRPQV 383
           TY   I+G+C+  +V
Sbjct: 508 TYNVLINGICMVDRV 522



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 7/355 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           +  + + G+ PD+ + + L+    +         +F  +    +  +   F +L+     
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E    +A  LF ++     +P+   Y   I  LC+ G    AL + +EM     E+G  F
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK----EVG--F 258

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                TY  ++D L K G +++A  +  +M+      +V+  T+L+ G+C   +   A  
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  E +  G+ P  V   V++    + G    A  L   M    + P+ F  + ++ G  
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              +      LF  M   G   D F+YN LI+ +C+  ++ EAL+L++ +   G+KP++ 
Sbjct: 379 NDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           TYN+L  G  +    + A+KL+ EM       +  TY T + G   +      YA
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 7/285 (2%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A   +  + A G  P++ +   L+    R      AL LF EM  G G     ++ +   
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEM-RGRG-----YRVDAWM 194

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           +  ++    KEG  + A  LF +M    ++P+   Y   I   C   D   A  +L EM 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G      +   +++ L K G+M+ A R+ D M     + +     TLM G+CL  ++ 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF      G       Y +LI G  +    ++A  L  ++  +G+ P+    + + 
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            GL   R+ + A+ LF EM  + +  D  TY   I   C   ++R
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLR 418


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++  L K  +YD  L  ++++ +    P L TY++L++  CK  +V     +
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++R    P+++ ++SLI GL    R+ EA  L   + A G  P  + Y +++ GLC+
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+   +EM        V       TYS I+ G    G V++A  +  +M   + 
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVD------TYSFIVTGYIGMGKVEEAFAVMEEMADRDC 277

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ ++YT  I          EA+ +   MV++G +P++ +  +I++  CK G M  A+ 
Sbjct: 278 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 337

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L LM +  V+PN + Y  +MDGF  + ++    EL+  +   G      +YN +IN  C
Sbjct: 338 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 397

Query: 309 KNKEVEEALSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           K K+++EAL L  E+  +   ++P++VTY+ + HGL ++   ERA  L  EM  N V  D
Sbjct: 398 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 457

Query: 367 TCTYRTFIDGLC 378
             TY + I  L 
Sbjct: 458 CFTYTSLIQTLA 469



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 50/415 (12%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P VSSFNILL   A    ++ V +L + + + G+  +  T+ ++++  C    +    
Sbjct: 25  SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAV 84

Query: 67  VIFG-------RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
             F        R+  +  AP+ VT+T+++ GL            + K+ A  CEP ++TY
Sbjct: 85  SYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTY 144

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
             L++GLC+      A ++F+EM           KP+ + YS +IDGL K G VD+A++L
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKG------HKPDIIAYSSLIDGLSKAGRVDEARKL 198

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK--------------------------- 212
              M      P  V YTS++ G C      EA                            
Sbjct: 199 VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 258

Query: 213 --------GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                    ++ EM D+   P+ +S  + +  L   G+ + A ++ + MV+   +P+  T
Sbjct: 259 MGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 318

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y  ++D FC  G +     +   M+    K + + Y ++++G+ K+  +EEAL LY  + 
Sbjct: 319 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 378

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ--GNDVAADTCTYRTFIDGL 377
             GI P+ VTYNT+ + L ++++ + AL+L  EMQ    ++     TY   I GL
Sbjct: 379 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 433



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 156/330 (47%), Gaps = 8/330 (2%)

Query: 52  LINCFCKMGQVS--LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
           L+    + GQ+S  LGF        S   PNV +F  L++G  A        AL  ++KA
Sbjct: 3   LLLALVRGGQLSDALGF-----FQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI-GVVFKPNTVTYSIIIDGLC 168
            G   N  T+  +++ LC       A++ F   T     +   +  P++VTY+ I+DGL 
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           K G  D   E + +M      P ++TYT L+ G C A+    A  +  EM+ +G +P+++
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + + +++ L K G++D A +L+DLM+     P A  Y +++ G C  G+I    +    M
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
                +    +Y+ ++ GY    +VEEA ++  E+  +   P  ++Y      L+ I + 
Sbjct: 238 RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 297

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E A K+F  M       D  TY   ID  C
Sbjct: 298 EEAEKVFETMVEKGCKPDMHTYGIIIDNFC 327



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 165/334 (49%), Gaps = 10/334 (2%)

Query: 8   PPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PPP + ++  ++  L K       +   + +    L P + TYS ++  +  MG+V   F
Sbjct: 207 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAF 266

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +     AP+ +++T  I+ L +  R  EA  +F  +   GC+P++ TY  +I+  
Sbjct: 267 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 326

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A ++ + M           KPN   Y++I+DG  K   +++A EL+ ++  +
Sbjct: 327 CKEGSMAAATHVLRLMDKA------AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD 380

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--DQGVQPNVVSSNVIMNELCKNGKMD 244
            + P+ VTY ++I+  C     +EA  LL EM    + ++P++V+ ++I++ L K G  +
Sbjct: 381 GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 440

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL  M+   V P+ FTY +L+      GK++R  EL   M   G   DD +Y  L+
Sbjct: 441 RAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 500

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              C++ +V+ A  L  E+   G  P   T+  +
Sbjct: 501 QILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 16/276 (5%)

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N+L+  L R G    AL  F+           + +PN  +++I++ G       +    L
Sbjct: 1   NSLLLALVRGGQLSDALGFFQ---------SSISEPNVSSFNILLRGFAARDDFEVVNAL 51

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ-------PNVVSSNV 232
             +MK   +  N  T+  ++   C   D ++A        ++  +       P+ V+   
Sbjct: 52  LREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTA 111

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           I++ L K G  D      + MV     P   TY  L+DG C   K+ R  ++F  M   G
Sbjct: 112 IVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKG 171

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K D  +Y+ LI+G  K   V+EA  L + +  +G  PT V Y ++  GL +  + + A+
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAV 231

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           K   EM+   +     TY   + G     +V   +A
Sbjct: 232 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFA 267


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 82  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 141

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLIN 201

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 202 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   ++N  CK G +D
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLD 315

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 375

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V     L  E+   G  P+VVTYN L +G
Sbjct: 376 NEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 100 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 159

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M           +P+  TYS++I+GLCKE  +D A 
Sbjct: 160 SYNTLMNGYIRXGDLDEGFXLKSXMLASG------VQPDVYTYSVLINGLCKESKMDDAN 213

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL++G C  G ++   E    M     + D+
Sbjct: 274 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDE 333

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +        KL  E
Sbjct: 334 VAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKE 393

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 394 MQRDGHVPSVVTYNVLMNG 412



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +G  +    + A +    M   ++  D   Y   I G C
Sbjct: 306 NGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXC 344



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 6/334 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 52  DIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 111

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLM 165

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 166 NGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 225

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 226 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 285

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LING CK  +++ A      +  + I+   V Y  L  G  +
Sbjct: 286 IDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQ 345

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++  A K+  EM    +  D  TY   I+  C
Sbjct: 346 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFC 379



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D    L   M+   
Sbjct: 129 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASG 188

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 189 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 248

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T I+G 
Sbjct: 249 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGC 308

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 309 CKEGDLDSAFEHRK 322



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC     + A +L + + +  G G    VF          + +   +S +I 
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 280


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N+LL  L +        +L   + S  + PD +TYSIL +   + G    
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +FG+ L++       T + L+ GLC + ++  A  +   L   G  P  + YNTLIN
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+TG    A + F +M + +       KP+ +TY+ +I+GLCK   +  A++L ++M+
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +NP V T+ +LI  +       +   +L EM + G++PNVVS   I+N  CKNGK+ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M   DV PNA  YN ++D +   G  ++   L   M+S G      +YN+LI
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++ EA  + N L    + P  V+YNTL          ++AL L   M    + 
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 365 ADTCTYRTFIDGL 377
           +   TY   I GL
Sbjct: 618 STVRTYHQLISGL 630



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  + +       + +F  +    + P+  TY+ +I+   K G +  G
Sbjct: 195 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 254

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  +++     PN +T+  L+ GLC   R+ E +AL  ++ +    P+  TY+ L +G
Sbjct: 255 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 314

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G +   L+LF +       IG        T SI+++GLCK+G V  A+E+   +  
Sbjct: 315 LSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEVLQSLVN 368

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   +   A     +M  + ++P+ ++ N ++N LCK  ++ N
Sbjct: 369 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 428

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M    V P   T+NTL+D +  TG++ +   +   M+  G K +  SY  ++N
Sbjct: 429 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 488

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++  K + P    YN +     E    ++A  L  +M+ N ++ 
Sbjct: 489 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 548

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   I GLC + Q+
Sbjct: 549 SIVTYNLLIKGLCNQSQI 566



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL   L++N     +LSLF +    G+    YT SIL+N  CK G+VS+   +
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   P  V + +LI G C    +  A + F ++K+   +P+ ITYN LINGLC+
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM + NG       P   T++ +ID   + G ++K   +  +M+   L
Sbjct: 423 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 476

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y S+++ FC      EA  +L +M  + V PN    N I++   ++G  D A  
Sbjct: 477 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 536

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L++ M    + P+  TYN L+ G C   +I+  +E+  S+ +     D  SYN LI+  C
Sbjct: 537 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 596

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +++AL L   +   GIK TV TY+ L  GL    +      L+ +M  N+V     
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656

Query: 369 TYRTFIDG 376
            +   ++ 
Sbjct: 657 IHNIMVEA 664



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 175/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +SS N+LL  L     +  V   F  L S G  PD + ++  +      G +     +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R+ R     PN  ++  +I G+    R  +A  +F ++      PN ITYNT+I+G  
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 128 RTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           + G       L  +M  +G        KPN +TY++++ GLC+ G + +   L  +M  +
Sbjct: 247 KGGDLEAGFRLRDQMVCHG-------LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 299

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+  TY+ L  G     D      L  + +  GV     + ++++N LCK+GK+  A
Sbjct: 300 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 359

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L  +V   + P    YNTL++G+C TG++      F  M+S   K D  +YN LING
Sbjct: 360 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 419

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK + +  A  L  E+   G+ PTV T+NTL        Q E+   +  EMQ N +  +
Sbjct: 420 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 479

Query: 367 TCTYRTFIDGLC 378
             +Y + ++  C
Sbjct: 480 VVSYGSIVNAFC 491



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K+        + + L + GL P    Y+ LIN +C+ G++   F  FG++  
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+ +T+ +LI GLC   RI  A  L  +++  G  P V T+NTLI+   RTG    
Sbjct: 404 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              +  EM   NG      KPN V+Y  I++  CK G + +A  +   M ++++ PN   
Sbjct: 464 CFIVLSEMQE-NG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 517

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I  +      ++A  L+ +M   G+ P++V+ N+++  LC   ++  A  +++ + 
Sbjct: 518 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 577

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+A +YNTL+   C  G I++  +L   M   G K    +Y+ LI+G      + 
Sbjct: 578 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 637

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           E   LY ++    + P+   +N +     +     +A  L  EM
Sbjct: 638 EMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 142/297 (47%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ + + G
Sbjct: 401 MKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F++   +  +   PNVV++ S++   C   +I EA A+   +      PN   YN
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+     G    A  L ++M + NG       P+ VTY+++I GLC +  + +A+E+ 
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQISEAEEII 573

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +    L P+ V+Y +LI   C+  + ++A  L   M   G++  V + + +++ L   
Sbjct: 574 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 633

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G+++    L   M+Q +V P+   +N +++ +   G   + ++L   M      HDD
Sbjct: 634 GRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 690


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 182/342 (53%), Gaps = 15/342 (4%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +N LL  L K K      ++F  + S   F PD+ +YSILI+ FCK+ ++     ++ ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PNV T+ + + GL  + RI +A  ++ ++ A GC P+VITY+TLI+G       
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF+ M      I    +PN VTY+ ++ GLCKE   D+A ELF +M     +P+ 
Sbjct: 569 DQAHELFETM------ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT+L++GFC+     +A  +  EMV +G  P+VV+ N ++    + GK   A +L  +
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES-MGCKHDDFSYNILINGYCKNK 311
           MV    +P+  ++N ++DG     +++   E+F  ME   GC  D  +YN LI G C  +
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGL-------FEIR 346
            + EA+ ++ E+    + P    +N L   +       FEIR
Sbjct: 743 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIR 784



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 198/427 (46%), Gaps = 52/427 (12%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILIN------- 54
           R++ PS     S   ++  L K    D+ LSL + +   G  PD+ T+S+LIN       
Sbjct: 368 RNIQPSSGTCHS---VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK 424

Query: 55  ------------------------------CFCKMGQVSLGFVIFGRIL-RSCFAPNVVT 83
                                           CK  +V   F IF  ++    F P+VV+
Sbjct: 425 IQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVS 484

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           ++ LI G C    +  A  L+ ++    C PNV TYN  +NGL R G    A  +++EM 
Sbjct: 485 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM- 543

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                +     P+ +TYS +I G       D+A ELF  M      PN VTY  L+HG C
Sbjct: 544 -----VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             +  +EA  L  +MV++G  P+ V+   ++   C  GK++ A  + D MV     P+  
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            YN L+ GF   GK    K+LF  M S  CK D  S+NI+I+G  K K +++A+ ++  +
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 324 PFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID----GLC 378
               G  P +VTYN+L  GL   ++   A+K+F E+    ++ D   +   ++    G+ 
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIV 778

Query: 379 VRPQVRF 385
            + ++RF
Sbjct: 779 YQFEIRF 785



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 181/379 (47%), Gaps = 9/379 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+    S  PV  +++L+  L ++   D        +    + P   T   +I   CK G
Sbjct: 331 MQESLSSSQPV--YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAG 388

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVIT 118
           +V     +   +++  + P++ T + LI  LC   +I EA      +  K      +  +
Sbjct: 389 RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFS 448

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           YN+L+N LC+      A  +F  M +        F P+ V+YSI+IDG CK   + +A++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERS-----FVPDVVSYSILIDGFCKIDELGRAEK 503

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L+ QM   N  PNV TY + ++G        +A+G+  EMV  G  P+V++ + +++   
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
              K D A  L + M+    RPNA TYN L+ G C   K +   ELF  M   GC  D  
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  L+ G+C   ++E+A+ +++E+  KG  P VV YN L  G F   +   A +LF  M
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683

Query: 359 QGNDVAADTCTYRTFIDGL 377
                  DT ++   IDGL
Sbjct: 684 VSRQCKPDTVSHNIMIDGL 702



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 182/433 (42%), Gaps = 67/433 (15%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ +L+      ++ D  +  F  +   G  P    Y  +  C    G+      +FGR 
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    A  ++   +L+     + + +EA+ LF  +   GC+P+   Y+ ++   C+  + 
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 133 IVALNLFKEMT----------------NG---NGEIGVVFKP----------NTVTYSII 163
             A  LF EM                 +G   +G+I   F+           +   Y ++
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDML 345

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I  L + G +DKA+E  L++   N+ P+  T  S+I   C A   + A  LL  M+ +G 
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-------------------CDVR----- 259
            P++ + ++++NELCK  K+  A   L  M +                   C  +     
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQA 465

Query: 260 --------------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
                         P+  +Y+ L+DGFC   ++ R ++L+  M  + C  +  +YN  +N
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 525

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G  +   + +A  +Y E+   G  P V+TY+TL HG    R+ ++A +LF  M       
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585

Query: 366 DTCTYRTFIDGLC 378
           +  TY   + GLC
Sbjct: 586 NAVTYNCLLHGLC 598



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 176/421 (41%), Gaps = 79/421 (18%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L+ F+ L +     D++TY+ L++   +   +     +F +++     PN  T+  L++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG------------------- 130
             C E    EA   F ++   G +P+   Y  +   L  TG                   
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232

Query: 131 ----------------HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
                             I A  LF+ M           KP+   YS ++   CK   +D
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSG------CKPDATIYSYMVLAHCKLENLD 286

Query: 175 KAKELFLQMKYENLNP-NVVTYTSLIHGFC------------------------------ 203
           +A +LFL+M  E+  P N V +T+ + G C                              
Sbjct: 287 EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLI 346

Query: 204 ----HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
                +   ++A+   +E+  + +QP+  + + ++ ELCK G++D+A  LL+ M++    
Sbjct: 347 RLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMES--MGCKHDDFSYNILINGYCKNKEVEEAL 317
           P+  T++ L++  C   KI   +E    M+          FSYN L+N  CK K+V +A 
Sbjct: 407 PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466

Query: 318 SLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++++ +   +   P VV+Y+ L  G  +I +  RA KL+ +M   +   +  TY  F++G
Sbjct: 467 AIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 526

Query: 377 L 377
           L
Sbjct: 527 L 527



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 15/212 (7%)

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           +A   F  ++  N   +V TY  L+       D  +A  +  +MV QGV PN  +  V++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF-------VS 287
              C     D A R    MV    +P++  Y  + +    TGK      +F       V+
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +E M          +L+N   ++K + EA  L+  +   G KP    Y+ +     ++  
Sbjct: 232 VEMM------LKKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLEN 284

Query: 348 AERALKLFVEMQGNDVAA-DTCTYRTFIDGLC 378
            + A KLF+EM     A  +   +  F+ GLC
Sbjct: 285 LDEAFKLFLEMAVESKAPLNNVAWTAFLSGLC 316


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 196/376 (52%), Gaps = 9/376 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R+M P+   +++   L+G L K   +   + L+ RL   G   +L T + LI+  CK G
Sbjct: 449 LRNMRPNDGLLTT---LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +  ++L   F  + +T+ +LI G C E ++ E   L  ++   G EP+  TYN
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G+CR G    A+NL+ E  + +        PN  TY ++IDG CK   +++ ++LF
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRD------LVPNVYTYGVMIDGYCKADKIEEGEKLF 619

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++  +NL  N V Y +LI  +C   +  EA  L  +M  +G+ P   + + +++ +C  
Sbjct: 620 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 679

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+M++A  L+D M +  + PN   Y  L+ G+C  G++++V  +   M S     +  +Y
Sbjct: 680 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 739

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            ++I+GY K+ +++ A  L +E+  KGI P  VTYN L +G  +  + E   K+   M  
Sbjct: 740 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQ 799

Query: 361 NDVAADTCTYRTFIDG 376
             +  D  TY T + G
Sbjct: 800 EGLPLDEITYTTLVHG 815



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 187/405 (46%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   LL  L K    +    +F+ +   G+ PD+Y +S  IN FCK G+V     +
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   +PNVVT+ +LI GLC    + EA     K+   G    +ITY+ LINGL +
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ KE           F PN V Y+ +IDG CK G +  A  +   M  + +
Sbjct: 329 LEKFNEANSVLKETLEKG------FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPN VT  S+I GFC      +A+ +L EM+ +G   N  +   I++ LC N + ++A R
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442

Query: 249 LLDLMVQCDVRPNA-----------------------------------FTYNTLMDGFC 273
            L  M+  ++RPN                                     T N L+ G C
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            TG +     L   M   G   D  +YN LI+G CK  +VEE   L  E+  +GI+P   
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN L HG+  I + + A+ L+ E +  D+  +  TY   IDG C
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 189/401 (47%), Gaps = 41/401 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++++L+  L K + ++   S+ K     G  P+   Y+ LI+ +CKMG +     I G +
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN VT  S+I+G C   ++ +A  +  ++ + G   N   + T+I+ LC     
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL   +EM   N       +PN    + ++ GLCKEG    A EL+ ++  +    N+
Sbjct: 438 ESALRFLREMLLRN------MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491

Query: 193 VTYTSLIHGFCHANDWNEAKGLLI-----------------------------------E 217
           VT  +LIHG C   +  EA  LL                                    E
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV QG++P+  + N++++ +C+ GK+D A  L +     D+ PN +TY  ++DG+C   K
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           I   ++LF  + +   + +   YN LI  YC+N    EA  L++++  KGI PT  TY++
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L HG+  I + E A  L  EM+   +  +   Y   I G C
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 181/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F  ++  L  N  +++ L   + +    + P+    + L+   CK G+ S    ++ R+
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L   F  N+VT  +LI GLC    + EA  L  K+   G   + ITYNTLI+G C+ G  
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                L  EM     E      P+T TY+++I G+C+ G +D+A  L+ + K  +L PNV
Sbjct: 543 EEGFKLRGEMVKQGIE------PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY  +I G+C A+   E + L  E++ Q ++ N V  N ++   C+NG    A +L D 
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P   TY++L+ G C  G++   K L   M   G   +   Y  LI GYCK  +
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++ +++  E+    I P  +TY  +  G  +    + A KL  EM G  +  DT TY  
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776

Query: 373 FIDGLCVRPQVR 384
             +G C   ++ 
Sbjct: 777 LTNGFCKEGKIE 788



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+    K    +    L   +   G+ PD +TY++LI+  C++G++     ++   
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PNV T+  +I G C   +I E   LFT+L     E N + YNTLI   CR G+T
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A  L  +M +          P T TYS +I G+C  G ++ AK L  +M+ E L PNV
Sbjct: 648 VEAFKLHDDMRSKG------IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V YT+LI G+C     ++   +L EM    + PN ++  V+++   K+G M  A++LL  
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           MV   + P+  TYN L +GFC  GKI    ++   M   G   D+ +Y  L++G+
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 199/390 (51%), Gaps = 18/390 (4%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDT-----VLSLFKRLNSIGLFPDLYTYSILINC 55
           +R ++  P      N ++ C   +  Y+         LF ++  +G+FP + T++ L++ 
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC-------AESRIVEAAALFTKLK 108
            CK G +  G  +  ++L++   PN+ TF   I+GLC       A S++VEA     K+ 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             G EP+  TYNT+I G  + G    A  + K+           F P+  TY  +I G+C
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKG------FVPDEFTYCSLIIGVC 339

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G +D A  LF +   + L P++V Y +LI G        +A  L+ +M  +G+ P++ 
Sbjct: 340 QDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N+++N LCK G + +A+ LL+  +     P+ FT+NTL+DG+C   K++    +  SM
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S G   D  +YN ++NG CK  + E+ +  +  +  KG  P ++TYN L   L + R+ 
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             AL L  E++   +  D  ++ T I G C
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFC 549



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 189/379 (49%), Gaps = 16/379 (4%)

Query: 9   PPVSSFNILLGCL--------AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           P + +FNI +  L        A +K  +    L K +N  GL PD +TY+ +I  + K+G
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNK-GLEPDDFTYNTIIYGYSKVG 307

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++     I        F P+  T+ SLI G+C +  I  A ALF +    G +P+++ YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GL + G  + AL L  +M+           P+  TY+++I+GLCK G V  A  L 
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEG------MSPDIWTYNLVINGLCKMGCVSDANNLL 421

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
                +   P++ T+ +LI G+C     + A G+L  M   GV P+V++ N I+N LCK 
Sbjct: 422 NAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKA 481

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            K ++      ++++    PN  TYN L++  C   K+    +L   + + G   D  S+
Sbjct: 482 AKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF 541

Query: 301 NILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
             +I+G+C N +++EA  L+  +  +  I  TV TYN + +   E    + A KLF EM 
Sbjct: 542 GTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMG 601

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 D+ TYR  IDG C
Sbjct: 602 DKGCDPDSYTYRVMIDGFC 620



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 181/370 (48%), Gaps = 12/370 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L++       L L   ++  G+ PD++TY+++IN  CKMG VS    +
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +   + P++ TF +LI G C   ++  A  +   + + G  P+VITYN+++NGLC+
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +  FK +     E G +  PN +TY+I+I+ LCK   V +A +L  +++   L
Sbjct: 481 AAKPEDVMETFKMIM----EKGCL--PNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+ V++ ++I GFC+  D +EA  L   M  Q  +   V + N+++N   +   MD A 
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +L   M      P+++TY  ++DGFC  G +N   +  +    +G      ++  +IN  
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    V EA+ + + +   G+ P  V   T+F      ++A  A K+ VE          
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEAVV--TIFDA---DKKAVAAPKIIVEDLLKKSHITY 709

Query: 368 CTYRTFIDGL 377
             Y    DG+
Sbjct: 710 YAYELLYDGI 719



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 172/357 (48%), Gaps = 13/357 (3%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           + +F+R++     P +++Y+ ++N   + G  +    ++ R+     AP+V TFT  IK 
Sbjct: 96  VDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKS 155

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C   R + A  L   + + GCE N + Y T+I+G     + + A  LF +M      +G
Sbjct: 156 FCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKML----RLG 211

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN- 209
           +   P+  T++ ++  LCK+G + + ++L  ++    + PN+ T+   I G C       
Sbjct: 212 IF--PHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269

Query: 210 ------EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
                 EA+  L +MV++G++P+  + N I+    K GK+ +ASR+L         P+ F
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TY +L+ G C  G I+    LF      G K     YN LI G  +   V +AL L N++
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             +G+ P + TYN + +GL ++     A  L           D  T+ T IDG C R
Sbjct: 390 SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKR 446



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 48/338 (14%)

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL---------------- 126
            + S ++    + ++ EA  +F ++  + CEP++ +YN ++N L                
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 127 -------------------CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
                              CRT   + AL L   M +   E+      N V Y  +I G 
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL------NAVVYCTVISGF 191

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
            +E +  +A ELF +M    + P++ T+  L+H  C      E + LL +++  GV PN+
Sbjct: 192 YEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251

Query: 228 VSSNVIMNELCKNG-------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            + N+ +  LC+ G       K+  A   L  MV   + P+ FTYNT++ G+   GKI  
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +    +  G   D+F+Y  LI G C++ +++ AL+L+ E   KG+KP++V YNTL  
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +     +AL+L  +M    ++ D  TY   I+GLC
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 7/225 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N +L  L K    + V+  FK +   G  P++ TY+ILI   CK  +V+ 
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTE 521

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLI 123
              +   I      P+ V+F ++I G C    + EA  LF ++ + +     V TYN +I
Sbjct: 522 ALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMI 581

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           N         +A  LF EM    G+ G    P++ TY ++IDG CK G V+   +  L+ 
Sbjct: 582 NAFSEKLDMDMAQKLFHEM----GDKGC--DPDSYTYRVMIDGFCKVGNVNSGYDFLLKE 635

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
                 P++ T+  +I+  C  +  +EA G++  MV  GV P  V
Sbjct: 636 IEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 8/248 (3%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
           AL++F  +   +G     FK   +TY  +I+ L   G  D  + + ++M+  N++ +++ 
Sbjct: 23  ALSIFNSVKKEDG-----FKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRL-NVDNSLLE 76

Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y S +  +       EA  +   M     +P++ S N IMN L + G  + A ++   
Sbjct: 77  GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+  T+   +  FC T +      L  +M S GC+ +   Y  +I+G+ +   
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             EA  L+N++   GI P + T+N L H L +    +   KL  ++  N V  +  T+  
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256

Query: 373 FIDGLCVR 380
           FI GLC +
Sbjct: 257 FIQGLCRK 264


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N+LL  L +        +L   + S  + PD +TYSIL +   + G    
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +FG+ L++       T + L+ GLC + ++  A  +   L   G  P  + YNTLIN
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+TG    A + F +M + +       KP+ +TY+ +I+GLCK   +  A++L ++M+
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +NP V T+ +LI  +       +   +L EM + G++PNVVS   I+N  CKNGK+ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M   DV PNA  YN ++D +   G  ++   L   M+S G      +YN+LI
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G C   ++ EA  + N L    + P  V+YNTL          ++AL L   M    + 
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613

Query: 365 ADTCTYRTFIDGL 377
           +   TY   I GL
Sbjct: 614 STVRTYHQLISGL 626



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +PPP + S+N+++  + +       + +F  +    + P+  TY+ +I+   K G +  G
Sbjct: 191 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 250

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +  +++     PN +T+  L+ GLC   R+ E +AL  ++ +    P+  TY+ L +G
Sbjct: 251 FSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 310

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R G +   L+LF +       IG        T SI+++GLCK+G V  A+E+   +  
Sbjct: 311 LSRNGDSKAMLSLFGKSLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEVLQSLVN 364

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L P  V Y +LI+G+C   +   A     +M  + ++P+ ++ N ++N LCK  ++ N
Sbjct: 365 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 424

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M    V P   T+NTL+D +  TG++ +   +   M+  G K +  SY  ++N
Sbjct: 425 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 484

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++  K + P    YN +     E    ++A  L  +M+ N ++ 
Sbjct: 485 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 544

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   I GLC + Q+
Sbjct: 545 SIVTYNLLIKGLCNQSQI 562



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 176/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +SS N+LL  L     +  V   F  L S G  PD + ++  +      G +     +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 69  FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R+ R     PN  ++  +I G+    R  +A  +F ++      PN ITYNT+I+G  
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 128 RTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           + G      +L  +M  +G        KPN +TY++++ GLC+ G + +   L  +M  +
Sbjct: 243 KGGDLEAGFSLRDQMVCHG-------LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 295

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + P+  TY+ L  G     D      L  + +  GV     + ++++N LCK+GK+  A
Sbjct: 296 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIA 355

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +L  +V   + P    YNTL++G+C TG++      F  M+S   K D  +YN LING
Sbjct: 356 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 415

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK + +  A  L  E+   G+ PTV T+NTL        Q E+   +  EMQ N +  +
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475

Query: 367 TCTYRTFIDGLC 378
             +Y + ++  C
Sbjct: 476 VVSYGSIVNAFC 487



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K+        + + L + GL P    Y+ LIN +C+ G++   F  FG++  
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+ +T+ +LI GLC   RI  A  L  +++  G  P V T+NTLI+   RTG    
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              +  EM   NG      KPN V+Y  I++  CK G + +A  +   M ++++ PN   
Sbjct: 460 CFIVLSEMQE-NG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 513

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I  +      ++A  L+ +M   G+ P++V+ N+++  LC   ++  A  +++ + 
Sbjct: 514 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS 573

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+A +YNTL+   C  G I++  +L   M   G K    +Y+ LI+G      + 
Sbjct: 574 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLI 633

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           E   LY ++    + P+   +N +     +     +A  L  EM
Sbjct: 634 EMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 7/297 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+  H  P  ++ +N L+  L K +       L   +   G+ P + T++ LI+ + + G
Sbjct: 397 MKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+   F++   +  +   PNVV++ S++   C   +I EA A+   +      PN   YN
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 515

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+     G    A  L ++M + NG       P+ VTY+++I GLC +  + +A+E+ 
Sbjct: 516 AIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQISEAEEII 569

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +    L P+ V+Y +LI   C+  + ++A  L   M   G++  V + + +++ L   
Sbjct: 570 NSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 629

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           G++     L   M+Q +V P+   +N +++ +   G   + ++L   M      HDD
Sbjct: 630 GRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 686


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 204/414 (49%), Gaps = 42/414 (10%)

Query: 2   RHMHPSPPP-----VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCF 56
           RH++    P     V  FN+L+    +N      + L + + + G  PD+ TY+ L+N F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           CK+G +     + G I      PNV+T+T+LI   C    + +A  ++ ++      P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV-------------FKP-------- 155
           +TY  ++NGLC++G    A ++F+EM     E+GVV             FK         
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREME----EVGVVPNRFSYATLIDSLFKEGNVAEAFV 178

Query: 156 ------------NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                       + V Y+ ++DGL K G  + A+++F  +  E+L PN VTY++LI G C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D N+ + LL EM ++ + PNV+  + I++   K G ++ A  ++  MVQ ++ PN F
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            Y TL+DG+    +     +LF  M+S G + ++F  +  +N   ++  +EEA  L+ ++
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +G+ P  V Y ++  G F+  +   A  +  EM       D   Y   I+GL
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 186/412 (45%), Gaps = 40/412 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +  L+  L K    +    +F+ L    L P+  TYS LI+  CK+G V+ G ++  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PNV+ ++S++ G   +  + EA  +  K+      PNV  Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +AL+LFKEM +         + N       ++ L + G +++A ELF  M    L P
Sbjct: 312 QRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ----------------------------- 221
           + V YTS++ GF  A   ++A  +  EM ++                             
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 222 -----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
                G+ P+  + N ++N  CK G + NA +LL+ M    ++PN+ T N L+   C  G
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +I +  +L   M  MG      ++  +++   K++  +  L ++++L   G+K  + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           TL      +    RA  +F +M G  + AD  TY   I G C+   ++  +A
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 28/396 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++    K    +  + + +++    + P+++ Y  LI+ + K  Q  +   +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N     S +  L    R+ EA  LF  + + G  P+ + Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV---------FK-------------------PNTVTY 160
            G    A N+ +EMT  +    VV         FK                   P++ T+
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I+  CKEG +  A +L  +MK   L PN +T   L+   C A +  +   LL +M+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G  P   +   +++   K+ + D    + D +V   V+ +  TYNTL+  FC  G I R
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +F  M   G   D  +YN LI+GYC +  +++A ++++++  +G+ P V TYN L  
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           GL   R  + A  L  +M+   +  +  TY   + G
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 19/360 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L K   Y++  S    +  +GL PD  T++ +IN +CK G +     +  
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN +T   L++ LCA   I +   L   +   G  P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              V L++  ++      +G+  K +  TY+ +I   C+ G + +A  +F  M  + +  
Sbjct: 521 RADVILHMHDQL------VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++TY +LIHG+C ++   +A  +  +M+ +GV PNV + N+++  L     +  A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + PNA TY+ L+ G    G +    +L+  M + G      +YN+LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI-RQAE-----------RALKLFVEM 358
           K++ +A  L  E+  +GI P   TY+ L  G +++ +Q E            A +LF EM
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 45/407 (11%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L ++   +    LFK + S GL PD   Y+ +++ F K G+ S  F I   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VV +  LI GL    +  E+ +  T ++  G  P+  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP---------- 190
           EM +         KPN++T +I++  LC  G ++K  +L   M     +P          
Sbjct: 461 EMKSYG------LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 191 -------------------------NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                                    ++ TY +LI  FC       A  +  +M+ +G+  
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++++ N +++  C +  +  A  +   M+   V PN  TYN L+ G      I     L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M+  G   +  +Y+IL++G+ K   ++E + LY E+  KG  P   TYN L     + 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDG---LCVRPQVRFTYAR 389
           ++  +A +L  EMQ   +  ++ TY   I G   L  +P++  +  R
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 116/219 (52%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++IDG C+ G + +A EL   MK E   P++VTY +L++GFC   D   AK L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
              ++PNV++   +++  CK+  +++A  + D M    + P+  TY  +M+G C +GK+ 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             K +F  ME +G   + FSY  LI+   K   V EA  L   +  +GI   VV Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+   A  A  +F  +    +  +  TY   IDG C
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 15/258 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           HP+P   ++   +L   +K++  D +L +  +L  +G+  DL TY+ LI+ FC++G +  
Sbjct: 503 HPTP---TTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  ++      +++T+ +LI G C  S + +A A+ +++   G  PNV TYN L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 125 GLCRTGHTIVALNLFKE---MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           GL        A  L KE   + N   E G+V  PN  TY I++ G  K G + +  +L+ 
Sbjct: 620 GLS-------AARLIKEAAGLVNQMKERGLV--PNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  +   P   TY  LI  F      ++AK L+ EM  +G+ PN  + ++++    K  
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 242 KMDNASRLLDLMVQCDVR 259
           K    ++ L    Q + +
Sbjct: 731 KQPELNKSLKRSYQAEAK 748



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%)

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +R L+     ++R +   +N L+DG+C  G+I+R  EL   M++ G   D  +YN L+NG
Sbjct: 2   TRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG 61

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  ++  A  L  E+    ++P V+TY TL     + +  E AL ++ EM    +  D
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY   ++GLC   +V 
Sbjct: 122 VVTYTCIMNGLCKSGKVE 139


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 196/406 (48%), Gaps = 41/406 (10%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++N +L  L K    +    L   + + GLFP+  T++IL+   C++G +     
Sbjct: 229 PPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAAN 288

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + ++   P+  T+  +I G C + RI EA  L  +++     P+V+TYNTLING  
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G +     L +EM  G G      KPN+VTY++++    K+G +D+  +   +M+   
Sbjct: 349 EHGSSEEGFKLIEEM-EGRG-----MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++VTY +LI   C     +EA  L+ EM  +G++ + V+ N ++  LC+  K+D A 
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462

Query: 248 -----------------------------------RLLDLMVQCDVRPNAFTYNTLMDGF 272
                                              RL D M + ++ P+  TYN+++ G 
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK N+  +    +   G   D+ +YN +I+GYC+  +VE+A   +N++  K  KP V
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VT NTL  GL +    E+ALKLF          D  +Y T I  LC
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLC 628



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 189/377 (50%), Gaps = 6/377 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            +SFNIL+        +   + +  ++   G  PD  TY+ +++  CK G+++    +  
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLL 256

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN  TF  L+ G C    + EAA +   +      P+  TYN +I+G C+ G
Sbjct: 257 DMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG 316

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ L +EM N      +   P+ VTY+ +I+G  + G  ++  +L  +M+   + P
Sbjct: 317 RIAEAMRLREEMEN------LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTY  ++  F      +E    + +M + G  P++V+ N +++  CK GKMD A RL+
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M +  ++ +  T NT++   C   K++   +L  S    G   D+ SY  LI GY K+
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           ++  +AL L++E+  K I P+++TYN++  GL ++ +  +A+    E+  + +  D  TY
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550

Query: 371 RTFIDGLCVRPQVRFTY 387
            T I G C   QV   +
Sbjct: 551 NTIIHGYCQEGQVEKAF 567



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 195/407 (47%), Gaps = 35/407 (8%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC---FCKMG 60
           +H S P     +I +G             +F R+  +G+ P L T + L+N    F    
Sbjct: 120 LHISKP---LLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSH 176

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            + L   +F   ++     N  +F  LI G C E+R  EA  +  K++ +GC P+ ITYN
Sbjct: 177 SIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYN 236

Query: 121 TLINGLCRTGHTIVALNLFKEMTN---------------GNGEIGVVFK----------- 154
           T+++GLC+ G    A +L  +M N               G   +G + +           
Sbjct: 237 TILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQN 296

Query: 155 ---PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+  TY+++I G CK+G + +A  L  +M+   L+P+VVTY +LI+G        E 
Sbjct: 297 SVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEG 356

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L+ EM  +G++PN V+ NV++    K GKMD   + +  M +    P+  TYNTL+  
Sbjct: 357 FKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISW 416

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  GK++    L   M   G K DD + N ++   C+ ++++EA  L      +G    
Sbjct: 417 HCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVD 476

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V+Y TL  G F+  +A +AL+L+ EM+  ++     TY + I GLC
Sbjct: 477 EVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLC 523



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K       + L + + ++ L PD+ TY+ LIN   + G    GF +
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN VT+  ++K    + ++ E      K++  GC P+++TYNTLI+  C+
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM    G  G+  K + VT + ++  LC+E  +D+A +L    +    
Sbjct: 420 VGKMDEAFRLMDEM----GRKGL--KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V+Y +LI G+      ++A  L  EM ++ + P++++ N ++  LC+ GK + A  
Sbjct: 474 FVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LD +++  + P+  TYNT++ G+C  G++ +  +    M     K D  + N L+ G C
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +E+AL L+N    KG     V+YNT+   L + ++   A  L  EM+   +  D  
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653

Query: 369 TYRTFIDGL 377
           TY   + GL
Sbjct: 654 TYNAILGGL 662



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K    D V    +++   G  PD+ TY+ LI+  CK+G++   F +
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R     + VT  ++++ LC E ++ EA  L    +  G   + ++Y TLI G  +
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+ EM     E  ++  P+ +TY+ +I GLC+ G  ++A +   ++    L
Sbjct: 490 HEKASQALRLWDEMK----EKEII--PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY ++IHG+C      +A     +MV++  +P+VV+ N ++  LCK G ++ A +
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  +      +A +YNT++   C   +     +L   ME      D ++YN ++ G  
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663

Query: 309 KNKEVEEALSLYNELPFKG 327
               +++A    +++  KG
Sbjct: 664 DAGRMKDAEEFISKIAEKG 682



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 29/253 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+    K++     L L+  +    + P + TY+ +I   C+MG+ +        +
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L S   P+ +T+ ++I G C E ++ +A     K+     +P+V+T NTL+ GLC+ G  
Sbjct: 539 LESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGML 598

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL LF    +   ++      + V+Y+ II  LCKE    +A +L  +M+ + L P+ 
Sbjct: 599 EKALKLFNTWISKGKDV------DAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDC 652

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGV-----------------------QPNVVS 229
            TY +++ G   A    +A+  + ++ ++G                         PN ++
Sbjct: 653 YTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIA 712

Query: 230 SNVIMNELCKNGK 242
            +  +NELC  G+
Sbjct: 713 YSNKINELCSQGR 725



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCK---NGKMDNASRLLDLMVQCDVRPNAFTY 265
           ++A  +   M   G+QP +++ N ++N L +   +  +  +  +    ++  V+ N  ++
Sbjct: 141 HQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSF 200

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N L+ G C+  +      +   M   GC  D+ +YN +++G CK   + EA  L  ++  
Sbjct: 201 NILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKN 260

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           KG+ P   T+N L  G   +   + A  +   M  N V  D  TY   I G C   Q R 
Sbjct: 261 KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC--KQGRI 318

Query: 386 TYARR 390
             A R
Sbjct: 319 AEAMR 323



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 81/215 (37%), Gaps = 52/215 (24%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L +    +  +     L   GL PD  TY+ +I+ +C+ GQV   F  
Sbjct: 510 PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT----------------------K 106
             +++   F P+VVT  +L+ GLC E  + +A  LF                       K
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK 629

Query: 107 LKAFG-------------CEPNVITYNTLINGLCRTGHTIVA-----------------L 136
            K FG               P+  TYN ++ GL   G    A                 L
Sbjct: 630 EKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFL 689

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
            L K       EI     PN + YS  I+ LC +G
Sbjct: 690 ELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQG 724


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 205/406 (50%), Gaps = 27/406 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+G L  + H +    LF ++ + G  P+ +T+ IL+  +C+ G  S G  +
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++      PN V + +LI   C E +  +A  L  K++  G  P+V T+N+ I+ LC 
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G  + A  +F++M   + E+G+   PN +TY +++ G CKEG +++AK L   MK    
Sbjct: 265 SGKILEASRIFRDMQI-DEELGLPH-PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+ +Y   + G        EA  +L EM+  G++P++ S N++M+ LCKNG + +A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+ LM++  + P+  TY+TL+ G+C  GK+     L   M S  C  + ++ N+L++   
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLW 442

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--- 365
           K   + EA +L  ++  KG     VT N + + L    Q ++A+++   M  +  AA   
Sbjct: 443 KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502

Query: 366 --------------------DTCTYRTFIDGLCVRPQVRFTYARRK 391
                               D  TY T I GLC     R   A++K
Sbjct: 503 LGNSFIGLVDDTISGKKCTPDLVTYSTIISGLC--KAGRLDDAKKK 546



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 10/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N+LL    +    + V  L+K +    + P+ YT+++LI   C  G +     +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++      PN  TF  L++G C      +   L  +++  G  PN + YNTLI+  C+
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  L  +M     E G+V  P+  T++  I  LC  G + +A  +F  M+ +  
Sbjct: 230 EGKTHDAEKLVDKMR----EDGLV--PHVETFNSRISALCGSGKILEASRIFRDMQIDEE 283

Query: 189 ----NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
               +PNV+TY  ++ GFC      EAK L+  M       N+ S N+ +  L +NGK+ 
Sbjct: 284 LGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLL 343

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +L  M+   + P+ ++YN +MDG C  G ++  + L   M   G   D  +Y+ L+
Sbjct: 344 EAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GYC   +V EA +L +E+      P   T N L H L++  +   A  L  +M      
Sbjct: 404 HGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG 463

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            DT T    I+ LC   Q+
Sbjct: 464 VDTVTCNIIINALCNNGQL 482



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 191/453 (42%), Gaps = 88/453 (19%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+NI L  L +N        + K +  IG+ PD+Y+Y+I+++  CK G +S   ++ G
Sbjct: 326 LESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMG 385

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R+   P+ VT+++L+ G C++ ++ EA  L  ++ +  C PN  T N L++ L + G
Sbjct: 386 LMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEG 445

Query: 131 HTIVALNLFKEMTN--------------------------------------------GN 146
               A NL ++M                                              GN
Sbjct: 446 RISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGN 505

Query: 147 GEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             IG+V          P+ VTYS II GLCK G +D AK+ F++M  + L P+   Y + 
Sbjct: 506 SFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTF 565

Query: 199 IHGFCHA-----------------------------------NDWNEAKGLLIEMVDQGV 223
           IH FC                                     N   E  GL+ EM ++GV
Sbjct: 566 IHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGV 625

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+V + N ++N LC+ G++++A  +LD M+Q  + PN  ++  L+  FC         E
Sbjct: 626 SPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHE 685

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +F    ++ C H +  Y ++ N      +V EA  L+     +        Y  L   L 
Sbjct: 686 VFEIALNV-CGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLC 744

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +  + E A  +   +       D  ++   IDG
Sbjct: 745 KDEKLEAASDVLHRLIDKGYQFDPASFMPVIDG 777



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 10/270 (3%)

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           +P++  YN L+    R     +   L+K+M      +     P   T++++I  LC  G 
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDM------VLARVSPEAYTFNLLIGLLCDSGH 162

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           ++ A+ELF +M      PN  T+  L+ G+C A   ++   LL +M   G+ PN V  N 
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---E 289
           +++  CK GK  +A +L+D M +  + P+  T+N+ +   C +GKI     +F  M   E
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 290 SMGCKHDD-FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            +G  H +  +Y +++ G+CK   +EEA +L + +        + +YN    GL    + 
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             A  +  EM G  +  D  +Y   +DGLC
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLC 372



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 7/286 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ ++  L K    D     F  + S GL PD   Y   I+ FC+ G++S  F +
Sbjct: 522 PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +      + T+ SLI GL ++++I E   L  +++  G  P+V TYN ++N LC 
Sbjct: 582 LKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCE 641

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A ++  EM            PN  ++ I+I   CK      + E+F ++     
Sbjct: 642 GGRINDAPSVLDEMLQKG------ISPNISSFRILIKAFCKACDFKASHEVF-EIALNVC 694

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                 YT + +         EAK L    +D+           +++ LCK+ K++ AS 
Sbjct: 695 GHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASD 754

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +L  ++    + +  ++  ++DGF   G  +   EL   M  M  +
Sbjct: 755 VLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASE 800



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 167 LCKEGFVDKAKELF--LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           L K GF +KA   F  L+  +    P++  Y  L+      N       L  +MV   V 
Sbjct: 85  LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P   + N+++  LC +G +++A  L D M      PN FT+  L+ G+C  G  ++  EL
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M +MG   ++  YN LI+ +CK  +  +A  L +++   G+ P V T+N+    L  
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 345 IRQAERALKLFVEMQGNDVAA----DTCTYRTFIDGLC 378
             +   A ++F +MQ ++       +  TY+  + G C
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFC 302



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 11/221 (4%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +++LG  +KN+ ++ +  L   +   G+ PD+ TY+ ++NC C+ G+++    +   +L+
Sbjct: 599 SLILGLGSKNQIFE-LYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQ 657

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
              +PN+ +F  LIK  C       +  +F ++    C      Y  + N L   G    
Sbjct: 658 KGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAE 716

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  LF+   + + +IG         Y  +ID LCK+  ++ A ++  ++  +    +  +
Sbjct: 717 AKELFETALDRSFDIG------NFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPAS 770

Query: 195 YTSLIHGFCHANDWNEAKGL---LIEMVDQGVQPNVVSSNV 232
           +  +I GF    + + A  L   ++EM  +  + N    NV
Sbjct: 771 FMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNV 811


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 175/332 (52%), Gaps = 6/332 (1%)

Query: 47  YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
           +TY+ L++  C  G V     +F  +     AP+   + +++ GLC   R  EA  L + 
Sbjct: 143 FTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSD 202

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
             A G EPNV+ YN LI+G C  G   +A+++F+ M + NG       PN  TY+ +I G
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM-DVNG-----CSPNVRTYTELISG 256

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            CK   +D+A  LF +M    L PNVVTYT+LI G C     + A  LL  M + G+ PN
Sbjct: 257 FCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPN 316

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
             + +V+++ LCK+ ++  A  LL  ++Q  ++ N   Y +L+DG C  G+      L  
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           ++ S G   D  +Y+ LI+G C+ KE+ EA+ + +++  KG++P+ VTY  +   L    
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A+ + K+  +M    +  D  TY  F+   C
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYC 468



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 176/370 (47%), Gaps = 10/370 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N  L  LA+++    + S   R+ +     +L TY+ LIN +C  G +         +L
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPA----RNLRTYTTLINAYCLAGDLPASKRHLSSLL 99

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+ FAP+   +TS + G C    +  A  LF  +   GC     TY  L++GLC  G   
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVR 159

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+++F  M   +G       P+   Y+ ++ GLC  G   +A+ L      E   PNVV
Sbjct: 160 EAMSVFAGM-QADG-----CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVV 213

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            Y +LI G+C+  D   A  +   M   G  PNV +   +++  CK+ K+D A  L   M
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V   + PN  TY  L+ G C  G+++    L  SME+ G   ++++ ++LI+  CK++ V
Sbjct: 274 VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERV 333

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L   L  KGIK   + Y +L  GL +  +   A +L   +       D  TY + 
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 374 IDGLCVRPQV 383
           IDGLC + ++
Sbjct: 394 IDGLCRQKEL 403



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 6/336 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+         +  + +F+R++  G  P++ TY+ LI+ FCK  ++    ++
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++ +   PNVVT+T+LI+G C++ ++  A  L   ++  G  PN  T + LI+ LC+
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L   +           K N + Y+ +IDGLCK G    A  L   +  +  
Sbjct: 330 HERVGEAQLLLGSLIQKG------IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+SLI G C   + +EA  +L +M+++GVQP+ V+  +I++EL +    D + +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD M+   ++P+ FTY   +  +C  G++   + + + M   G   +  +YN LI GY 
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
                 +A S +  +   G KP   +Y  L   L +
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  LL  L         +S+F  + + G  PD + Y+ +++  C  G+      +    
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   F PNVV + +LI G C    +  A  +F ++   GC PNV TY  LI+G C++   
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ LF  M +     G+V  PN VTY+ +I G C +G +D A  L   M+   L PN 
Sbjct: 264 DRAMMLFSRMVDA----GLV--PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T + LI   C      EA+ LL  ++ +G++ N +    +++ LCK G+   A RL+  
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +V     P+A TY++L+DG C   +++    +   M   G +    +Y I+I+   +   
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            + +  + +++   GIKP V TY           + E A  + + M  + V  +  TY  
Sbjct: 438 ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNA 497

Query: 373 FIDG 376
            I G
Sbjct: 498 LICG 501



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 184/420 (43%), Gaps = 57/420 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+     +   D    L + + + GL P+ +T S+LI+  CK  +V    ++
Sbjct: 280 PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLL 339

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +++     N + +TSLI GLC   R   A  L   L + G  P+  TY++LI+GLCR
Sbjct: 340 LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR 399

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +  +M     E GV  +P+ VTY+IIID L +E   D +K++  +M    +
Sbjct: 400 QKELSEAMLVLDDMM----EKGV--QPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM-------------- 234
            P+V TYT  +  +CH     +A+ +++ MVD GV PN+V+ N ++              
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513

Query: 235 ------------NE-------------------------LCKNGKMDNASRLLDLMVQCD 257
                       NE                         + K  +M     LL+ MV+  
Sbjct: 514 TFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQ 573

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           +      YN  +   C   +++  K L + M+S      +  Y  +I   C+ K + EAL
Sbjct: 574 LPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEAL 633

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  + +   G  P + +Y  +   L E    + A ++F +M   +   +   +R  IDGL
Sbjct: 634 TFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGL 693



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 22/346 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L + K     + +   +   G+ P   TY+I+I+   +         I
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ +   P+V T+T  ++  C E R+ +A  +   +   G  PN++TYN LI G   
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF----------VDKAKE 178
            G T  A + FK M   NG      KPN  +Y++++  L K+            + K  E
Sbjct: 505 LGLTSQAFSTFKHMV-ANG-----CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558

Query: 179 ------LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
                 L  +M    L   +  Y   +   C  +  +EAK LLIEM    + P+      
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           I+   C+   +  A   +D MV+    P   +Y  ++   C  G I   K++F  M S  
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE 678

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +++ ++ ILI+G  +   V E  SL + +  K  +P+   Y  L
Sbjct: 679 YNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 11/319 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P PV+ + I++  L +    D    +  ++ + G+ PD++TY+I +  +C  G++    
Sbjct: 419 QPSPVT-YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++     PN+VT+ +LI G        +A + F  + A GC+PN  +Y  L+  L
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL 537

Query: 127 CRTGHT------IVALNLFKEMTNGNGEIGVVFK---PNTV-TYSIIIDGLCKEGFVDKA 176
            +   +       V++    EM   +G +  + K   P+ +  Y+  +  LC+   +D+A
Sbjct: 538 IKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           K L ++M+  NL P+   YTS+I   C      EA   +  MV  G  P + S   I++ 
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISS 657

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LC+ G +  A ++   M+  +       +  L+DG    G +     L   ME    +  
Sbjct: 658 LCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717

Query: 297 DFSYNILINGYCKNKEVEE 315
           D  Y  L        +++E
Sbjct: 718 DALYARLTGKITDANDIQE 736



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 103/273 (37%), Gaps = 41/273 (15%)

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           N+ TY TLIN  C  G    +      +          F P++  Y+  + G C+ G + 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAG------FAPDSHAYTSFVVGYCRAGLLA 124

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            A  LF+ M          TYT+L+HG C A    EA  +   M   G  P+        
Sbjct: 125 HACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPD-------- 176

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
                                         Y T++ G C  G+    + L     + G +
Sbjct: 177 ---------------------------PHVYATMVHGLCGAGRTREAETLLSDAMAEGFE 209

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +   YN LI+GYC   ++E A+ ++  +   G  P V TY  L  G  + R+ +RA+ L
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           F  M    +  +  TY   I G C   Q+   Y
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 24/244 (9%)

Query: 1   MRHM--HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M HM  H   P + ++N L+   A         S FK + + G  P+  +Y++L+    K
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539

Query: 59  --------MGQVSLGFV--------IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
                      VS+  +        +   +++      +  +   +  LC   R+ EA  
Sbjct: 540 KESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKI 599

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L  ++++    P+   Y ++I   CR      AL     M          + P   +Y  
Sbjct: 600 LLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSG------YIPQLESYRH 653

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           II  LC+EG +  AK++F  M  +  N   + +  LI G        E   LL  M ++ 
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713

Query: 223 VQPN 226
            +P+
Sbjct: 714 YRPS 717


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  + K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 84  HKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRV 143

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 204 GLCKESKMDDANELFDEMLDK----GLV--PNGVTFTTLIDGHCKSGRVDLAMEIYKQML 257

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 258 SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 317

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S G K D  +Y ++I
Sbjct: 318 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMII 377

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V     L  E+   G  P+VVTYN L +G
Sbjct: 378 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 102 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVV 161

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 162 SFNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKMDDAN 215

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C +   + A  +  +M+ Q + P++++ N ++  L
Sbjct: 216 ELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 276 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 335

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +        KL  E
Sbjct: 336 VAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 396 MQRDGHVPSVVTYNVLMNG 414



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C +G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 346



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 126/235 (53%), Gaps = 10/235 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L    +P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQEN------IRLDDVAYTALISGLCQEGRYLDAEKVLR 359

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           +M    L P+  TYT +I+ FC   D W  +K LL EM   G  P+VV+ NV+MN
Sbjct: 360 EMLSAGLKPDTGTYTMIINEFCKKGDVWTGSK-LLKEMQRDGHVPSVVTYNVLMN 413



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+++ +++G  + 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWG------LRPSVVSFNTLMNGYIRL 173

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+D+G+ PN V+ 
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CK+G++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  +   
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 353

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 354 AEKVLREMLSAGLKPDTGTYTMIINEFCKKGDV 386



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 131 LMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 190

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CK+  V+ A+
Sbjct: 191 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAM 250

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 310

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 311 CKEGDLETAFEHRK 324



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 63

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 64  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPA 123

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G +  A  + + + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 124 SLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 183

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS 243

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 282


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 187/376 (49%), Gaps = 14/376 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            +S N LL  L + +    +  L   +    + P + T+ IL+N  CK  ++     +F 
Sbjct: 281 AASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD 340

Query: 71  RILRSC------FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLI 123
           R+            P+VV F +LI GLC   +  +  +L  ++K      PN +TYN LI
Sbjct: 341 RLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLI 400

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  + G+   A  LF++M     E GV  +PN +T + ++DGLCK G V +A E F +M
Sbjct: 401 DGFFKAGNFDRAHELFRQMN----EEGV--QPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K + L  N  TYT+LI  FC  N+ N A     EM+  G  P+ V    +++ LC  G+M
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           ++AS ++  +       +   YN L+ GFC   K+ RV EL   ME  G K D  +YN L
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGND 362
           I+   K  +   A  +  ++  +G++P+VVTY  + H     +  +  +K+F EM   + 
Sbjct: 575 ISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK 634

Query: 363 VAADTCTYRTFIDGLC 378
           V  +T  Y   ID LC
Sbjct: 635 VPPNTVIYNILIDALC 650



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 185/395 (46%), Gaps = 46/395 (11%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR--------SCFA--- 78
           V+ L  +L   G+FPD +  + L+   C   +  + + +   ++R        SC A   
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLT 289

Query: 79  ------------------------PNVVTFTSLIKGLCAESRIVEAAALFTKLKA----- 109
                                   P+VVTF  L+  LC   RI EA  +F +L+      
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSN 349

Query: 110 -FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             G EP+V+ +NTLI+GLC+ G     L+L +EM  GN     + +PNTVTY+ +IDG  
Sbjct: 350 WVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN-----INRPNTVTYNCLIDGFF 404

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           K G  D+A ELF QM  E + PNV+T  +L+ G C     + A     EM  +G++ N  
Sbjct: 405 KAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAA 464

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +   +++  C    ++ A +  + M+     P+A  Y +L+ G C+ G++N    +   +
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL 524

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +  G   D   YN+LI+G+CK K++E    L  E+   G+KP  +TYNTL   L +    
Sbjct: 525 KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             A K+  +M    +     TY   I   C +  V
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNV 619



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 190/412 (46%), Gaps = 49/412 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL------NSIGLFPDLYTYSILINCFCKMGQV 62
           P V +F IL+  L K +  D  L +F RL      N +G+ PD+  ++ LI+  CK+G+ 
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373

Query: 63  SLGFVIFGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
             G  +   + + +   PN VT+  LI G         A  LF ++   G +PNVIT NT
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           L++GLC+ G    A+  F EM  G G      K N  TY+ +I   C    +++A + F 
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEM-KGKG-----LKGNAATYTALISAFCGVNNINRAMQCFE 487

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAK----------------------------- 212
           +M     +P+ V Y SLI G C A   N+A                              
Sbjct: 488 EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547

Query: 213 ------GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
                  LL EM + GV+P+ ++ N +++ L K G    AS++++ M++  +RP+  TY 
Sbjct: 548 KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYG 607

Query: 267 TLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            ++  +C    ++   ++F  M S      +   YNILI+  C+N +V+ A+SL  ++  
Sbjct: 608 AIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKV 667

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           K ++P   TYN +  G+ + +   +A +L   M       D  T     + L
Sbjct: 668 KRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 198/449 (44%), Gaps = 74/449 (16%)

Query: 2   RHMHPSPPPV-SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSIL-------- 52
           +  HP+ P    S ++LL CL   +  +  L LF +L+     P L  + +L        
Sbjct: 131 KSTHPTLPLTPKSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQL-CHGLLRVLLKSGR 189

Query: 53  ----INCFCKMGQVSLGF-----VIFGRILRSCFA-------------------PNVVTF 84
               ++   +M Q + GF     ++FG ++RS  +                   P+    
Sbjct: 190 AGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKL 249

Query: 85  TSLIKGLCAESR----------------IVEAAA-------------------LFTKLKA 109
           T L+  LC + +                 V+AA+                   L  +++ 
Sbjct: 250 TQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEK 309

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
               P+V+T+  L+N LC+      AL +F  +    G   V  +P+ V ++ +IDGLCK
Sbjct: 310 RKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCK 369

Query: 170 EGFVDKAKELFLQMKYENLN-PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            G  +    L  +MK  N+N PN VTY  LI GF  A +++ A  L  +M ++GVQPNV+
Sbjct: 370 VGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVI 429

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           + N +++ LCK+G++  A    + M    ++ NA TY  L+  FC    INR  + F  M
Sbjct: 430 TLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEM 489

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S GC  D   Y  LI+G C    + +A  + ++L   G       YN L  G  + ++ 
Sbjct: 490 LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKL 549

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ER  +L  EM+   V  DT TY T I  L
Sbjct: 550 ERVYELLTEMEETGVKPDTITYNTLISYL 578



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 8/350 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    K  ++D    LF+++N  G+ P++ T + L++  CK G+V      
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N  T+T+LI   C  + I  A   F ++ + GC P+ + Y +LI+GLC 
Sbjct: 451 FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCI 510

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  ++          F  +   Y+++I G CK+  +++  EL  +M+   +
Sbjct: 511 AGRMNDASVVVSKLKLAG------FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY +LI       D+  A  ++ +M+ +G++P+VV+   I++  C    +D   +
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624

Query: 249 LLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +   M     V PN   YN L+D  C    ++R   L   M+    + +  +YN ++ G 
Sbjct: 625 IFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
              K + +A  L + +  +  +P  +T   L   L  + + E+ LK FVE
Sbjct: 685 RDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK-LKHFVE 733


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++L+    KN + +     +  + + G+   +Y+ + ++  + K       F +
Sbjct: 296 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   L S  A NV TF +L+  LC E ++ EA  L+ ++ A G  PNV++YN +I G CR
Sbjct: 356 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 414

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  ++KEM + NG     F PN VT++I++DG  K+G ++ A  +F +MK  N+
Sbjct: 415 KDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   T   +I G C A    E + L  + V QG  P  +  N I++   K G ++ AS 
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  + P+  TY +L+DGFC    I+   +L   M+  G K D  +Y  LI+G+C
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K ++++ A  L NEL   G+ P    YN++  G   +   E A+ L+ +M    +  D  
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 369 TYRTFIDGL 377
           TY + IDGL
Sbjct: 649 TYTSLIDGL 657



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 186/370 (50%), Gaps = 7/370 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  VS  NI+LG   K+ + +    ++K +   G  P+  T++IL++ + K G +   F
Sbjct: 399 SPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 457

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF R+  +   P   T   +IKGLC   R  E   LF K  + G  P  + YNT+I+G 
Sbjct: 458 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 517

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G+  +A N+++EM     E+G+   P+TVTY+ +IDG CK   +D A +L   MK +
Sbjct: 518 IKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  ++  Y +LI GFC   D   A  LL E+   G+ PN    N ++        ++ A
Sbjct: 572 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 631

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   MV   +  +  TY +L+DG   +G++    ++   M S G   DD ++ +LING
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C   + E A  +  ++  K + P+V+ YNTL  G F+    + A +L  EM    +  D
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751

Query: 367 TCTYRTFIDG 376
             TY   ++G
Sbjct: 752 NITYDILVNG 761



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 32/399 (8%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCF 77
           L CL  N  Y   LSL + + + G  P   T++ +I    K G V+    +   ++    
Sbjct: 202 LLCLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGK 259

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           + N+   TSL+KG C +  +  A  L  ++   G  PN +TY+ LI+G C+ G+   A  
Sbjct: 260 SMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFE 319

Query: 138 LFKEMTNGNGEIGVVFKPNTV-----------------------------TYSIIIDGLC 168
            + EM    G    V+  N++                             T++ ++  LC
Sbjct: 320 FYSEMKT-KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLC 378

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           KEG +++A  L+ ++  + ++PNVV+Y ++I G C  ++ N A  +  EM+D G  PN V
Sbjct: 379 KEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAV 438

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +  ++M+   K G ++NA  +   M   ++ P   T   ++ G C  G+    ++LF   
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 498

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
            S G       YN +I+G+ K   +  A ++Y E+   GI P+ VTY +L  G  +    
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           + ALKL  +M+   +  D   Y T IDG C R  ++  +
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 163/344 (47%), Gaps = 7/344 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F +  + G+  D   YSI ++  C          +   +  + + P   TFTS+I     
Sbjct: 181 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 240

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E  + EA  L   +   G   N+    +L+ G C  G+   AL L  E++    E G+V 
Sbjct: 241 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS----ESGLV- 295

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN VTYS++IDG CK G ++KA E + +MK + +  +V +  S++ G+     W  A  
Sbjct: 296 -PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 354

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +  + ++ G+  NV + N +++ LCK GKM+ A  L D ++   + PN  +YN ++ G C
Sbjct: 355 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               IN   +++  M   G   +  ++ IL++GY K  ++E A S+++ +    I PT  
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           T   +  GL +  ++     LF +            Y T IDG 
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 517



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 40/319 (12%)

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E  I+EA   F + KA G E +   Y+  ++ LC   ++  AL+L +EM          +
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG------W 224

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P   T++ +I    KEG V +A  L   M     + N+   TSL+ G+C   +   A  
Sbjct: 225 IPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA-------------------SRLLDLMV 254
           L+ E+ + G+ PN V+ +V+++  CKNG ++ A                   + +L+  +
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344

Query: 255 QCDVRPNA---------------FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +C    NA               FT+NTL+   C  GK+N    L+  + + G   +  S
Sbjct: 345 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 404

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN +I G+C+   +  A  +Y E+   G  P  VT+  L  G F+    E A  +F  M+
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 360 GNDVAADTCTYRTFIDGLC 378
             ++     T    I GLC
Sbjct: 465 DANILPTDTTLGIIIKGLC 483



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 1/210 (0%)

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           +EG + +A++ FLQ K   +  +   Y+  +H  C   +   A  LL EM   G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +   ++    K G +  A RL D MV C    N     +LM G+C+ G +     L   +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   +  +Y++LI+G CKN  +E+A   Y+E+  KGI+ +V + N++  G  + +  
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + A  +F +   + + A+  T+ T +  LC
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLC 378


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 204/414 (49%), Gaps = 42/414 (10%)

Query: 2   RHMHPSPPP-----VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCF 56
           RH++    P     V  FN+L+    +N      + L + + + G  PD+ TY+ L+N F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           CK+G +     + G I      PNV+T+T+LI   C    + +A  ++ ++      P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV-------------FKP-------- 155
           +TY  ++NGLC++G    A ++F+EM     E+GVV             FK         
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREME----EVGVVPNRFSYATLIDSLFKEGNVAEAFV 178

Query: 156 ------------NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                       + V Y+ ++DGL K G  + A+++F  +  E+L PN VTY++LI G C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D N+ + LL EM ++ + PNV+  + I++   K G ++ A  ++  MVQ ++ PN F
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            Y TL+DG+    +     +LF  M+S G + ++F  +  +N   ++  +EEA  L+ ++
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +G+ P  V Y ++  G F+  +   A  +  EM       D   Y   I+GL
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 40/412 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +  L+  L K    +    +F+ L    L P+  TYS LI+  CK+G V+ G ++  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PNV+ ++S++ G   +  + EA  +  K+      PNV  Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +AL+LFKEM +         + N       ++ L + G +++A ELF  M    L P
Sbjct: 312 QRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ----------------------------- 221
           + V YTS++ GF  A   ++A  +  EM ++                             
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 222 -----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
                G+ P+  + N ++N  CK G + NA +LL+ M    ++PN+ T N L+   C  G
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +I +  +L   M  MG      ++  +++   K++  +  L  +++L   G+K  + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYN 545

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           TL      +    RA  +F +M G  + AD  TY   I G C+   ++  +A
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 28/396 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++    K    +  + + +++    + P+++ Y  LI+ + K  Q  +   +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N     S +  L    R+ EA  LF  + + G  P+ + Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV---------FK-------------------PNTVTY 160
            G    A N+ +EMT  +    VV         FK                   P++ T+
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I+  CKEG +  A +L  +MK   L PN +T   L+   C A +  +   LL +M+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G  P   +   +++   K+ + D      D +V   V+ +  TYNTL+  FC  G I R
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +F  M   G   D  +YN LI+GYC +  +++A ++++++  +G+ P V TYN L  
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           GL   R  + A  L  +M+   +  +  TY   + G
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 177/360 (49%), Gaps = 19/360 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L K   Y++  S    +  +GL PD  T++ +IN +CK G +     +  
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN +T   L++ LCA   I +   L   +   G  P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              V L+   ++      +G+  K +  TY+ +I   C+ G + +A  +F  M  + +  
Sbjct: 521 RADVILHXHDQL------VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++TY +LIHG+C ++   +A  +  +M+ +GV PNV + N+++  L     +  A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + PNA TY+ L+ G    G +    +L+  M + G      +YN+LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI-RQAE-----------RALKLFVEM 358
           K++ +A  L  E+  +GI P   TY+ L  G +++ +Q E            A +LF EM
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 45/407 (11%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L ++   +    LFK + S GL PD   Y+ +++ F K G+ S  F I   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VV +  LI GL    +  E+ +  T ++  G  P+  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP---------- 190
           EM +         KPN++T +I++  LC  G ++K  +L   M     +P          
Sbjct: 461 EMKSYG------LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 191 -------------------------NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                                    ++ TY +LI  FC       A  +  +M+ +G+  
Sbjct: 515 ASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++++ N +++  C +  +  A  +   M+   V PN  TYN L+ G      I     L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M+  G   +  +Y+IL++G+ K   ++E + LY E+  KG  P   TYN L     + 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDG---LCVRPQVRFTYAR 389
           ++  +A +L  EMQ   +  ++ TY   I G   L  +P++  +  R
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 116/219 (52%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++IDG C+ G + +A EL   MK E   P++VTY +L++GFC   D   AK L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
              ++PNV++   +++  CK+  +++A  + D M    + P+  TY  +M+G C +GK+ 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             K +F  ME +G   + FSY  LI+   K   V EA  L   +  +GI   VV Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+   A  A  +F  +    +  +  TY   IDG C
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 15/258 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           HP+P   ++   +L   +K++  D +L    +L  +G+  DL TY+ LI+ FC++G +  
Sbjct: 503 HPTP---TTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  ++      +++T+ +LI G C  S + +A A+ +++   G  PNV TYN L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 125 GLCRTGHTIVALNLFKE---MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           GL        A  L KE   + N   E G+V  PN  TY I++ G  K G + +  +L+ 
Sbjct: 620 GLS-------AARLIKEAAGLVNQMKERGLV--PNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  +   P   TY  LI  F      ++AK L+ EM  +G+ PN  + ++++    K  
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 242 KMDNASRLLDLMVQCDVR 259
           K    ++ L    Q + +
Sbjct: 731 KQPELNKSLKRSYQAEAK 748



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%)

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +R L+     ++R +   +N L+DG+C  G+I+R  EL   M++ G   D  +YN L+NG
Sbjct: 2   TRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG 61

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  ++  A  L  E+    ++P V+TY TL     + +  E AL ++ EM    +  D
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY   ++GLC   +V 
Sbjct: 122 VVTYTCIMNGLCKSGKVE 139


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 202/413 (48%), Gaps = 70/413 (16%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  ++  LAKNK     ++L +++ + G  P + TY+ L+N  CKMG++     +  
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I+ +   P+VVT+TSLI GL  E R  EA  LF ++ + G   + + Y  LI GL +TG
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378

Query: 131 HTIVALNLFKEMTNGN------------------GEIGV---VFK--------PNTVTYS 161
               A +++K MT+                    G IG    +FK        PN V YS
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 438

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I GLCK   +D A E+  QMK     P+ +TY  LI G C + D   A+    EM++ 
Sbjct: 439 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 498

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI--- 278
           G +P+V + N++++ LCK G  D A  +LD     D+  + F Y++L+DG C +GK+   
Sbjct: 499 GCKPDVYTYNILISGLCKAGNTDAACGVLD-----DMSSSRFVYSSLVDGLCKSGKLEGG 553

Query: 279 ----------------------------NRVKE---LFVSMESMGCKHDDFSYNILINGY 307
                                       NRV E   LF ++   G  H  ++YN +I+  
Sbjct: 554 CMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP-YAYNSIISAL 612

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            K+ +V E  ++Y E+  +  KP  VTYN L +G+    + +RA   ++EM G
Sbjct: 613 IKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTG 664



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 12/370 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N++L  L K+      +  F+ +    +     T+SILIN   K G +     +
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSL 246

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                 +    ++ T+T+++  L    +I EA AL  K+ A GC P + TYN L+NGLC+
Sbjct: 247 AQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK 306

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L +++ + NG       P+ VTY+ +IDGL KE    +A +LF +M    L
Sbjct: 307 MGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGL 360

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V YT+LI G        +A  +   M   G  P+VV+ + +++ L K G++  A R
Sbjct: 361 ALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 420

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M    + PN   Y+ L+ G C   K++   E+   M+   C  D  +YNILI+G C
Sbjct: 421 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 480

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +VE A + ++E+   G KP V TYN L  GL +    + A  +      +D+++   
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL-----DDMSSSRF 535

Query: 369 TYRTFIDGLC 378
            Y + +DGLC
Sbjct: 536 VYSSLVDGLC 545



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 180/357 (50%), Gaps = 11/357 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++F+IL+  L K        SL +   + G   D++TY+ ++N   K  ++     
Sbjct: 221 PVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVA 280

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  +I  +   P + T+ +L+ GLC   R+ EA  L  K+   GC P+V+TY +LI+GL 
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   +  A  LFKEM +     G+    +TV Y+ +I GL + G + +A  ++  M    
Sbjct: 341 KEKRSFEAYKLFKEMASR----GLAL--DTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VVT +++I G   A     A  +   M  +G+ PN V  + +++ LCK  KMD A 
Sbjct: 395 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 454

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M +    P+  TYN L+DG C +G +   +  F  M   GCK D ++YNILI+G 
Sbjct: 455 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           CK    + A  + +++       +   Y++L  GL +  + E    LF EM+ + VA
Sbjct: 515 CKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA 566



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLG 65
           P V ++N+L+   CLA+    +   ++ + +    G+ P L T++++++  CK G+V   
Sbjct: 152 PDVETWNVLITGYCLAREP--EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
              F  + RS    +  TF+ LI GL     +++A +L  +    GC  ++ TY  ++N 
Sbjct: 210 MDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L +      A+ L +++T  NG       P   TY+ +++GLCK G +++A +L  ++  
Sbjct: 269 LAKNKKIQEAVALMEKIT-ANG-----CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 322

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+VVTYTSLI G        EA  L  EM  +G+  + V    ++  L + GK+  
Sbjct: 323 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQ 382

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           AS +   M      P+  T +T++DG    G+I     +F SME+ G   ++  Y+ LI+
Sbjct: 383 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 442

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK ++++ AL +  ++      P  +TYN L  GL +    E A   F EM       
Sbjct: 443 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 502

Query: 366 DTCTYRTFIDGLC 378
           D  TY   I GLC
Sbjct: 503 DVYTYNILISGLC 515



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 10/380 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + N LL   A+ K +    +L K   +    PD+ T+++LI  +C   +    F +  
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI- 177

Query: 71  RILRSCF--APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           R +   F  AP++ T   ++ GLC   +++ A   F  ++      +  T++ LINGL +
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVK 236

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  I A +L +E T     I +       TY+ I++ L K   + +A  L  ++     
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDI------HTYTAIVNWLAKNKKIQEAVALMEKITANGC 290

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + TY +L++G C      EA  LL ++VD G  P+VV+   +++ L K  +   A +
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M    +  +   Y  L+ G   TGKI +   ++ +M S GC  D  + + +I+G  
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   +  A+ ++  +  +G+ P  V Y+ L HGL + R+ + AL++  +M+      DT 
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470

Query: 369 TYRTFIDGLCVRPQVRFTYA 388
           TY   IDGLC    V    A
Sbjct: 471 TYNILIDGLCKSGDVEAARA 490



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 14/288 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V + + ++  L+K       + +FK + + GL P+   YS LI+  CK  ++  
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++ ++   P+ +T+  LI GLC    +  A A F ++   GC+P+V TYN LI+
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G+T  A  +  +M++           +   YS ++DGLCK G ++    LF +M+
Sbjct: 513 GLCKAGNTDAACGVLDDMSS-----------SRFVYSSLVDGLCKSGKLEGGCMLFHEME 561

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +  N  T T LI   C AN  +EA  L   +  +G+ P+  + N I++ L K+GK++
Sbjct: 562 RSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 619

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
               +   M +   +P+  TYN L++G     +++R    ++ M   G
Sbjct: 620 EGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 136/301 (45%), Gaps = 6/301 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F  +V T  +L+       R  EA  L     A    P+V T+N LI G C       A 
Sbjct: 115 FQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAF 174

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            + +EM     + GV   P+  T+++++ GLCK G V  A + F  ++  ++  +  T++
Sbjct: 175 AVIREMEE---DFGVA--PSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFS 228

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LI+G   A    +A  L  E    G   ++ +   I+N L KN K+  A  L++ +   
Sbjct: 229 ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN 288

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P   TYN L++G C  G++    +L   +   GC  D  +Y  LI+G  K K   EA
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 348

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L+ E+  +G+    V Y  L  GL +  +  +A  ++  M  +    D  T  T IDG
Sbjct: 349 YKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 408

Query: 377 L 377
           L
Sbjct: 409 L 409



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 2/168 (1%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G Q +V + N +++   +  +   A  LL   +    RP+  T+N L+ G+CL  +    
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 282 KELFVSMES-MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
             +   ME   G      ++N++++G CK+ +V  A+  + E   + +  +  T++ L +
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILIN 232

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           GL +     +A  L  E   N    D  TY   ++ L    +++   A
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVA 280



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 283 ELFVSMES--MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           ELF  + S   G +H   + N L++ + + K   EA +L         +P V T+N L  
Sbjct: 103 ELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLIT 162

Query: 341 GLFEIRQAERALKLFVEMQGN-DVAADTCTYRTFIDGLCVRPQV 383
           G    R+ E A  +  EM+ +  VA    T+   + GLC   +V
Sbjct: 163 GYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKV 206


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 204/414 (49%), Gaps = 42/414 (10%)

Query: 2   RHMHPSPPP-----VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCF 56
           RH++    P     V  FN+L+    +N      + L + + + G  PD+ TY+ L+N F
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           CK+G +     + G I      PNV+T+T+LI   C    + +A  ++ ++      P+V
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV-------------FKP-------- 155
           +TY  ++NGLC++G    A ++F+EM     E+GVV             FK         
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREME----EVGVVPNRFSYATLIDSLFKEGNVAEAFV 178

Query: 156 ------------NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                       + V Y+ ++DGL K G  + A+++F  +  E+L PN VTY++LI G C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D N+ + LL EM ++ + PNV+  + I++   K G ++ A  ++  MVQ ++ PN F
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            Y TL+DG+    +     +LF  M+S G + ++F  +  +N   ++  +EEA  L+ ++
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             +G+ P  V Y ++  G F+  +   A  +  EM       D   Y   I+GL
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 186/412 (45%), Gaps = 40/412 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +  L+  L K    +    +F+ L    L P+  TYS LI+  CK+G V+ G ++  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PNV+ ++S++ G   +  + EA  +  K+      PNV  Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +AL+LFKEM +         + N       ++ L + G +++A ELF  M    L P
Sbjct: 312 QRGIALDLFKEMKSRG------LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ----------------------------- 221
           + V YTS++ GF  A   ++A  +  EM ++                             
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 222 -----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
                G+ P+  + N ++N  CK G + NA +LL+ M    ++PN+ T N L+   C  G
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +I +  +L   M  MG      ++  +++   K++  +  L ++++L   G+K  + TYN
Sbjct: 486 EIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           TL      +    RA  +F +M G  + AD  TY   I G C+   ++  +A
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 28/396 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ ++    K    +  + + +++    + P+++ Y  LI+ + K  Q  +   +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       N     S +  L    R+ EA  LF  + + G  P+ + Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV---------FK-------------------PNTVTY 160
            G    A N+ +EMT  +    VV         FK                   P++ T+
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I+  CKEG +  A +L  +MK   L PN +T   L+   C A +  +   LL +M+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G  P   +   +++   K+ + D    + D +V   V+ +  TYNTL+  FC  G I R
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +F  M   G   D  +YN LI+GYC +  +++A ++++++  +G+ P V TYN L  
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           GL   R  + A  L  +M+   +  +  TY   + G
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 19/360 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L K   Y++  S    +  +GL PD  T++ +IN +CK G +     +  
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN +T   L++ LCA   I +   L   +   G  P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              V L++  ++      +G+  K +  TY+ +I   C+ G + +A  +F  M  + +  
Sbjct: 521 RADVILHMHDQL------VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++TY +LIHG+C ++   +A  +  +M+ +GV PNV + N+++  L     +  A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + PNA TY+ L+ G    G +    +L+  M + G      +YN+LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI-RQAE-----------RALKLFVEM 358
           K++ +A  L  E+  +GI P   TY+ L  G +++ +Q E            A +LF EM
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 45/407 (11%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L ++   +    LFK + S GL PD   Y+ +++ F K G+ S  F I   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           VV +  LI GL    +  E+ +  T ++  G  P+  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP---------- 190
           EM +         KPN++T +I++  LC  G ++K  +L   M     +P          
Sbjct: 461 EMKSYG------LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 191 -------------------------NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                                    ++ TY +LI  FC       A  +  +M+ +G+  
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++++ N +++  C +  +  A  +   M+   V PN  TYN L+ G      I     L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M+  G   +  +Y+IL++G+ K   ++E + LY E+  KG  P   TYN L     + 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDG---LCVRPQVRFTYAR 389
           ++  +A +L  EMQ   +  ++ TY   I G   L  +P++  +  R
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 116/219 (52%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++IDG C+ G + +A EL   MK E   P++VTY +L++GFC   D   AK L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
              ++PNV++   +++  CK+  +++A  + D M    + P+  TY  +M+G C +GK+ 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             K +F  ME +G   + FSY  LI+   K   V EA  L   +  +GI   VV Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            GLF+   A  A  +F  +    +  +  TY   IDG C
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 15/258 (5%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           HP+P   ++   +L   +K++  D +L +  +L  +G+  DL TY+ LI+ FC++G +  
Sbjct: 503 HPTP---TTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  ++      +++T+ +LI G C  S + +A A+ +++   G  PNV TYN L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 125 GLCRTGHTIVALNLFKE---MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           GL        A  L KE   + N   E G+V  PN  TY I++ G  K G + +  +L+ 
Sbjct: 620 GLS-------AARLIKEAAGLVNQMKERGLV--PNATTYDILVSGHGKIGNMKECVKLYC 670

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M  +   P   TY  LI  F      ++AK L+ EM  +G+ PN  + ++++    K  
Sbjct: 671 EMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLS 730

Query: 242 KMDNASRLLDLMVQCDVR 259
           K    ++ L    Q + +
Sbjct: 731 KQPELNKSLKRSYQAEAK 748



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%)

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           +R L+     ++R +   +N L+DG+C  G+I+R  EL   M++ G   D  +YN L+NG
Sbjct: 2   TRHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG 61

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  ++  A  L  E+    ++P V+TY TL     + +  E AL ++ EM    +  D
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 367 TCTYRTFIDGLCVRPQVR 384
             TY   ++GLC   +V 
Sbjct: 122 VVTYTCIMNGLCKSGKVE 139


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++L+    KN + +     +  + + G+   +Y+ + ++  + K       F +
Sbjct: 178 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 237

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   L S  A NV TF +L+  LC E ++ EA  L+ ++ A G  PNV++YN +I G CR
Sbjct: 238 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  ++KEM + NG     F PN VT++I++DG  K+G ++ A  +F +MK  N+
Sbjct: 297 KDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   T   +I G C A    E + L  + V QG  P  +  N I++   K G ++ AS 
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  + P+  TY +L+DGFC    I+   +L   M+  G K D  +Y  LI+G+C
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K ++++ A  L NEL   G+ P    YN++  G   +   E A+ L+ +M    +  D  
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530

Query: 369 TYRTFIDGL 377
           TY + IDGL
Sbjct: 531 TYTSLIDGL 539



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 186/370 (50%), Gaps = 7/370 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP  VS  NI+LG   K+ + +    ++K +   G  P+  T++IL++ + K G +   F
Sbjct: 281 SPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 339

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF R+  +   P   T   +IKGLC   R  E   LF K  + G  P  + YNT+I+G 
Sbjct: 340 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 399

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G+  +A N+++EM     E+G+   P+TVTY+ +IDG CK   +D A +L   MK +
Sbjct: 400 IKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  ++  Y +LI GFC   D   A  LL E+   G+ PN    N ++        ++ A
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   MV   +  +  TY +L+DG   +G++    ++   M S G   DD ++ +LING
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C   + E A  +  ++  K + P+V+ YNTL  G F+    + A +L  EM    +  D
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633

Query: 367 TCTYRTFIDG 376
             TY   ++G
Sbjct: 634 NITYDILVNG 643



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 185/397 (46%), Gaps = 32/397 (8%)

Query: 20  CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAP 79
           CL  N  Y   LSL + + + G  P   T++ +I    K G V+    +   ++    + 
Sbjct: 86  CLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 143

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N+   TSL+KG C +  +  A  L  ++   G  PN +TY+ LI+G C+ G+   A   +
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 203

Query: 140 KEMTNGNGEIGVVFKPNTV-----------------------------TYSIIIDGLCKE 170
            EM    G    V+  N++                             T++ ++  LCKE
Sbjct: 204 SEMKT-KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKE 262

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++A  L+ ++  + ++PNVV+Y ++I G C  ++ N A  +  EM+D G  PN V+ 
Sbjct: 263 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 322

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            ++M+   K G ++NA  +   M   ++ P   T   ++ G C  G+    ++LF    S
Sbjct: 323 TILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS 382

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G       YN +I+G+ K   +  A ++Y E+   GI P+ VTY +L  G  +    + 
Sbjct: 383 QGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDL 442

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           ALKL  +M+   +  D   Y T IDG C R  ++  +
Sbjct: 443 ALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 163/343 (47%), Gaps = 7/343 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F +  + G+  D   YSI ++  C          +   +  + + P   TFTS+I     
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E  + EA  L   +   G   N+    +L+ G C  G+   AL L  E++    E G+V 
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS----ESGLV- 177

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN VTYS++IDG CK G ++KA E + +MK + +  +V +  S++ G+     W  A  
Sbjct: 178 -PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +  + ++ G+  NV + N +++ LCK GKM+ A  L D ++   + PN  +YN ++ G C
Sbjct: 237 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               IN   +++  M   G   +  ++ IL++GY K  ++E A S+++ +    I PT  
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           T   +  GL +  ++     LF +            Y T IDG
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDG 398



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 157/369 (42%), Gaps = 40/369 (10%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +   +IL+    +         +  ++L      +  T   +++    E  I+EA   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F + KA G E +   Y+  ++ LC   ++  AL+L +EM          + P   T++ +
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG------WIPPEGTFTSV 116

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I    KEG V +A  L   M     + N+   TSL+ G+C   +   A  L+ E+ + G+
Sbjct: 117 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 176

Query: 224 QPNVVSSNVIMNELCKNGKMDNA-------------------SRLLDLMVQCDVRPNA-- 262
            PN V+ +V+++  CKNG ++ A                   + +L+  ++C    NA  
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 263 -------------FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
                        FT+NTL+   C  GK+N    L+  + + G   +  SYN +I G+C+
Sbjct: 237 MFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +  A  +Y E+   G  P  VT+  L  G F+    E A  +F  M+  ++     T
Sbjct: 297 KDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTT 356

Query: 370 YRTFIDGLC 378
               I GLC
Sbjct: 357 LGIIIKGLC 365



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/162 (19%), Positives = 69/162 (42%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P++   N+++  + +      A  L + M+   V  + FT + ++      G I   +
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           + F+  ++ G + D  +Y+I ++  C       ALSL  E+   G  P   T+ ++    
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +      AL+L  +M     + +     + + G C++  +R
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 162


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++  +    K + +D    +F+ +       +  TY+++I+  C+ G V   F  
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    +P+  T+ +L+ GLC  SR+ EA AL  ++   G +PN++ Y TL++G  +
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A ++ KEM      I    +PN + Y  +I GLCK G + +A +L  +M    L
Sbjct: 361 EGKTAEAFDILKEM------ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL 414

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  L+ G    +D + A  LL EM + G+ PNV S  +++N LC+NG+   A  
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGN 474

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M+   ++PNAF Y  L+ G    G I+   E    M       D F YN LI G  
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               +EEA   Y ++  +G+ P   TY+ L HG  +    E+A +L  +M  + +  +  
Sbjct: 535 TVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNAD 594

Query: 369 TYRTFIDG 376
           TY   ++G
Sbjct: 595 TYTDLLEG 602



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 188/413 (45%), Gaps = 42/413 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    +    D    L   + + G+ P++Y+Y I+IN  C+ G+      +
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     PN   +  LI G   E  I  A     K+      P++  YN+LI GL  
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   + ++     + G+V  P+  TYS +I G CK G ++KA +L  QM    L
Sbjct: 536 VGRMEEAEEYYAQVQ----KRGLV--PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN-----VVSSNVIMNE------- 236
            PN  TYT L+ G+  +ND+ +   +L  M+  G +P+     +V  N+  +E       
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 649

Query: 237 -----------------------LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                  LCK   M+ A  LLD M +  + P    YN L+DGFC
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G I+R + +F S+ + G   +  +Y  LI+G CKN ++ +A  LY E+  +GI P   
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            YN L  G  +    E+AL L  EM  N   A+   + T + G C R +++ T
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMF-NRGYANVSLFNTLVHGFCKRGKLQET 821



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 163/364 (44%), Gaps = 6/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N LL  L +    + +  L   +   G+ PD+YTYS  I   CK         +F  + R
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR 271

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
              A N VT+  +I GLC    + EA     ++  +G  P+  TY  L+NGLC+      
Sbjct: 272 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKE 331

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  L  EM+          KPN V Y  ++DG  KEG   +A ++  +M    + PN + 
Sbjct: 332 AKALLDEMSCSG------LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIM 385

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y +LI G C       A  LL EM+  G++P+  + N +M    +    D A  LL+ M 
Sbjct: 386 YDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMR 445

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + PN ++Y  +++G C  G+      L   M S G K + F Y  LI G+ K   + 
Sbjct: 446 NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A     ++    + P +  YN+L  GL  + + E A + + ++Q   +  D  TY   I
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565

Query: 375 DGLC 378
            G C
Sbjct: 566 HGYC 569



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 183/405 (45%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K        +L   ++  GL P++  Y  L++ F K G+ +  F I
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI 370

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL------ 122
              ++ +   PN + + +LI+GLC   ++  A+ L  ++   G  P+  TYN L      
Sbjct: 371 LKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQ 430

Query: 123 -----------------------------INGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                                        INGLC+ G +  A NL +EM      I    
Sbjct: 431 QHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM------ISEGL 484

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KPN   Y+ +I G  KEG +  A E   +M   N++P++  Y SLI G        EA+ 
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              ++  +G+ P+  + + +++  CK G ++ A +LL  M+   ++PNA TY  L++G+ 
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +    +V  +  SM   G K D+  Y I+I    +++ +E A  +  E+   G+ P + 
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            Y++L  GL +I   E+A+ L  EM    +      Y   IDG C
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 183/401 (45%), Gaps = 42/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+ I++  L +N       +L + + S GL P+ + Y+ LI    K G +SL    
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ ++   P++  + SLIKGL    R+ EA   + +++  G  P+  TY+ LI+G C+
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM----- 183
           TG+   A  L ++M N         KPN  TY+ +++G  K    +K   +   M     
Sbjct: 571 TGNLEKADQLLRQMLNSG------LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 184 ---------------KYENLN---------------PNVVTYTSLIHGFCHANDWNEAKG 213
                          + EN+                P++  Y+SLI G C   D  +A G
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL EM  +G++P +V  N +++  C++G +  A  + D ++   + PN  TY  L+DG C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I    +L+  M   G   D F YN+L  G     ++E+AL L  E+  +G    V 
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVS 803

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            +NTL HG  +  + +   KL   M   ++  +  T    +
Sbjct: 804 LFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 160/337 (47%), Gaps = 14/337 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P      +L++ + K G V     +   +     AP       L+K L       +A  L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR----ADAMEL 226

Query: 104 FTKLKAF----GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
             KLK F    G  P+V TY+T I   C+      A  +F+EM   +  +      N VT
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAM------NEVT 280

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I GLC+ G V++A     +M    L+P+  TY +L++G C  +   EAK LL EM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G++PN+V    +++   K GK   A  +L  M+   V+PN   Y+ L+ G C  G++ 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R  +L   M  +G + D F+YN L+ G+ +  + + A  L NE+   GI P V +Y  + 
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +GL +  +++ A  L  EM    +  +   Y   I G
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 497



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 139/301 (46%), Gaps = 6/301 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           +P+      L+        +  AA +   +   G  P     N L+  L R      A+ 
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD----AME 225

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L  ++       G++  P+  TYS  I+  CK    D AK++F +M+  +   N VTY  
Sbjct: 226 LLWKLKGFMEGAGIL--PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV 283

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           +I G C +    EA G   EMVD G+ P+  +   +MN LCK  ++  A  LLD M    
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG 343

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++PN   Y TL+DGF   GK     ++   M S G + +   Y+ LI G CK  ++  A 
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L  E+   G++P   TYN L  G F+    + A +L  EM+ + +  +  +Y   I+GL
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463

Query: 378 C 378
           C
Sbjct: 464 C 464



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 7/282 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL    K+  Y+ V S+ + +   G  PD + Y I+I    +   + + F++
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   P++  ++SLI GLC  + + +A  L  ++   G EP ++ YN LI+G CR
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 710

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A N+F  +       G+V  PN VTY+ +IDG CK G +  A +L+ +M    +
Sbjct: 711 SGDISRARNVFDSILAK----GLV--PNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  L  G   A D  +A  L  EM ++G   NV   N +++  CK GK+    +
Sbjct: 765 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEK 823

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           LL +M+  ++ PNA T   ++  F   GK+     +F  ++ 
Sbjct: 824 LLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 58/245 (23%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEM-------------VDQGVQ----------PN 226
           P+   +  L    C A+ + +A GLL +M             + + +Q          P+
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQ------------------------------- 255
               +V+++   K G + NA++++ +M                                 
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232

Query: 256 ----CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
                 + P+ +TY+T ++  C     +  K++F  M    C  ++ +YN++I+G C++ 
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            VEEA     E+   G+ P   TY  L +GL +  + + A  L  EM  + +  +   Y 
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352

Query: 372 TFIDG 376
           T +DG
Sbjct: 353 TLVDG 357


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 190/373 (50%), Gaps = 9/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHY--DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + + N +L  L+++        L +F+ L  + L P+ YT+++L++  C  G ++   
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                +     +P+ VT+ +L+   C +  + EA AL  ++K  G  P   TYNTL++  
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KY 185
            R G    A  + + MT         F+P+  TY+++  GLC+ G VD+A  L  +M + 
Sbjct: 289 ARLGWIKQATKVVESMT------AYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERL 342

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+VVTY +L+         ++A  LL EM D+GV+P +V+ N+++  LCK GK++ 
Sbjct: 343 STALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A   L+ + +  + P+  TYNTL+D +C  G + +   L   M   G K D F+ N ++ 
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             CK K  E+A  L +  P +G  P  V+Y T+    F+    E AL+L+ +M    +  
Sbjct: 463 NLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIP 522

Query: 366 DTCTYRTFIDGLC 378
              TY T I GLC
Sbjct: 523 SISTYNTLIKGLC 535



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 184/408 (45%), Gaps = 65/408 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P   ++N L+   A+         + + + + G  PDL TY++L    C+ G+V   F  
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL 335

Query: 67  --------------VIFGRILRSCFA--------------------PNVVTFTSLIKGLC 92
                         V +  ++ +CF                     P +VT   ++K LC
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E ++ EA     K+   G  P+VITYNTLI+  C+ G+   A  L  EM     ++   
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 153 -----------------------------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                                        F P+ V+Y  ++    KE   + A  L+ QM
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L P++ TY +LI G C      EA   L E+V++G+ P+  + N+I++  CK G +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +NA R  + MV+   +P+  T NTLM+G CL GK+++  +LF S    G K D  +YN L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           I   CK  +V+ AL  ++++  KG++P   TYN +   L E  ++E A
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 192/434 (44%), Gaps = 71/434 (16%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN+L+            L+    +   GL PD  TY+ L+N  C+ G +     +  R+
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            R   AP   T+ +L+        I +A  +   + A+G EP++ TYN L  GLC+ G  
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329

Query: 133 IVALNLFKEMTNGNGEIGVVF------------------------------KPNTVTYSI 162
             A  L  EM   +  +  V                               KP  VT++I
Sbjct: 330 DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++  LCKEG +++A     ++  E L P+V+TY +LI  +C A +  +A  L+ EMV +G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 223 VQPNVVSSNVIMNELCKNGKMDNAS----------------------------------- 247
           ++ +  + N ++  LCK  + ++A                                    
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCKHDDFSYNILI 304
           RL D M++  + P+  TYNTL+ G C   ++ R+KE    +  +   G   D+ +YNI+I
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLC---RMERLKEAIDKLNELVEKGLVPDETTYNIII 566

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + YCK  ++E A   +N++     KP VVT NTL +GL    + ++ALKLF         
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626

Query: 365 ADTCTYRTFIDGLC 378
            D  TY T I  +C
Sbjct: 627 VDVITYNTLIQSMC 640



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 43/416 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + NI++  L K    +  L   +++   GL PD+ TY+ LI+ +CK G V+  F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      +  T  +++  LC   R  +A  L       G  P+ ++Y T++    +
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL L+ +M      I     P+  TY+ +I GLC+   + +A +   ++  + L
Sbjct: 502 EYNPEPALRLWDQM------IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +IH +C   D   A     +MV+   +P+VV+ N +MN LC +GK+D A +
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  V+   + +  TYNTL+   C  G ++     F  ME  G + D F+YN++++   
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675

Query: 309 KNKEVEEALSLYNELPFKG----------IKPTVV------------------------- 333
           +    EEA ++ ++L   G          +KP+                           
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 334 -TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            TY    +GL    Q + A  +  EM    +  D+ TY T ++GL  R Q R T+A
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKR-QKRQTHA 790



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 10/283 (3%)

Query: 100 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTI--VALNLFKEMTNGNGEIGVVFKPN 156
           AA L   L+   G  P++   N +++ L R+  T+   +L++F+ +      I +   PN
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL------IELRLHPN 207

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T+++++   C +G +  A      M+   L+P+ VTY +L++  C      EA+ LL 
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M   G+ P   + N +++   + G +  A+++++ M      P+  TYN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327

Query: 277 KINRVKELFVSMESMGCKHDD-FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           K++    L   ME +     D  +YN L++   K +   +AL L  E+  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N +   L +  + E AL    ++    +A D  TY T ID  C
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 193/368 (52%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +    +    L   L   G  P++  Y+ LI+  CK G++     +F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +     N  T+T LI GL       +   ++ K++  G  PN+ TYN ++N  C+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDG 282

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A  LF EM     E GV    N VTY+ +I GLC+E   ++A ++  QMK + +NP
Sbjct: 283 RTKDAFKLFDEMR----ERGV--SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY +LI GFC      +A  L  ++  +G+ P++V+ N++++  CK G    A +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++P+  TY  L+D F     + +  +L   ME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIK 456

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++ EA  L+  +  K ++P  V YNT+  G  +   + RAL+LF EM+  ++  +  +Y
Sbjct: 457 GQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 371 RTFIDGLC 378
           R  I+ LC
Sbjct: 517 RYMIEVLC 524



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 191/376 (50%), Gaps = 19/376 (5%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + +++    +++  D+ +S F  +   G  P         NCF  +    +G   F +  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPG-------SNCFNNLLTFVVGSSSFNQWW 149

Query: 74  RSCFAP------NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           R           +V +F  +IKG C    I ++  L  +L+ FG  PNV+ Y TLI+G C
Sbjct: 150 RFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A +LF EM    G+ G+V   N  TY+++I GL K G   +  E++ +M+ + 
Sbjct: 210 KRGEIEKAKDLFFEM----GKFGLV--ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN+ TY  +++  C      +A  L  EM ++GV  N+V+ N ++  LC+  K + A+
Sbjct: 264 VFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +++D M    + PN  TYNTL+DGFC  GK+ +   L   ++S G      +YNIL++G+
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +   A  +  E+  +GIKP+ +TY  L      +   E+A++L   M+   +  D 
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 368 CTYRTFIDGLCVRPQV 383
            TY   I G C++ Q+
Sbjct: 444 HTYSVLIHGFCIKGQM 459



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 174/319 (54%), Gaps = 6/319 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ +L+  L KN        +++++   G+FP+LYTY+ ++N  CK G+    F +F  +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                + N+VT+ +LI GLC E +  EA  +  ++K+ G  PN+ITYNTLI+G C  G  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKL 354

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L +++ +          P+ VTY+I++ G CK+G    A ++  +M+   + P+ 
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TYT LI  F   ++  +A  L   M + G+ P+V + +V+++  C  G+M+ ASRL  L
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV   + PN   YNT++ G+C  G   R   LF  ME      +  SY  +I   CK ++
Sbjct: 469 MVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 313 VEEALSLYNELPFKGIKPT 331
            +EA  L  ++   GI P+
Sbjct: 529 SKEAEGLVEKMIDTGIDPS 547



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 181/358 (50%), Gaps = 7/358 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R    SP  V    ++ GC  K    +    LF  +   GL  + +TY++LI+   K G
Sbjct: 189 LREFGFSPNVVIYTTLIDGC-CKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               GF ++ ++      PN+ T+  ++   C + R  +A  LF +++  G   N++TYN
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLCR      A  +  +M +          PN +TY+ +IDG C  G + KA  L 
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSDG------INPNLITYNTLIDGFCGVGKLGKALSLC 361

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +K   L+P++VTY  L+ GFC   D + A  ++ EM ++G++P+ ++  ++++   + 
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             M+ A +L   M +  + P+  TY+ L+ GFC+ G++N    LF  M +   + +   Y
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           N ++ GYCK      AL L+ E+  K + P V +Y  +   L + R+++ A  L  +M
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 34/250 (13%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G  +  F   +  L    + E        Y  +I+ +  +   + +     EMVD+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKG 124

Query: 223 VQP----------------------------------NVVSSNVIMNELCKNGKMDNASR 248
             P                                  +V S  +++   C+ G+++ +  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +    PN   Y TL+DG C  G+I + K+LF  M   G   ++++Y +LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++   +Y ++   G+ P + TYN + +   +  + + A KLF EM+   V+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIV 304

Query: 369 TYRTFIDGLC 378
           TY T I GLC
Sbjct: 305 TYNTLIGGLC 314



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 39/156 (25%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P   ++ IL+   A+  + +  + L   +  +GL PD++TYS+LI+ FC  GQ++     
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 64  --------------------LGFVIFGRILRSC----------FAPNVVTFTSLIKGLCA 93
                               LG+   G   R+             PNV ++  +I+ LC 
Sbjct: 466 FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
           E +  EA  L  K+   G +P+    ++++N + R 
Sbjct: 526 ERKSKEAEGLVEKMIDTGIDPS----DSILNLISRA 557


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 197/410 (48%), Gaps = 46/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-----PDLYTYSILINCFCKMGQVS 63
           P V S N LL    + + +    + F  L S G F     P+L TY+I++   C  G + 
Sbjct: 118 PGVRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIMLRSLCVRGDLD 176

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  +     AP+ +T+++L+ G    +R+  A  L  ++ ++  +P+ + YN L+
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALL 236

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G  R G    A+ +++++    G       PN  TY++++DGLCK G   +A +++ +M
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVRDPGA-----SPNLATYNVMLDGLCKLGMFKEAGDVWERM 291

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              N  P+++TY ++IHG C + D + A  +  EM+  G+ P+VV  N ++   C  G++
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRV 351

Query: 244 DNASRLLDLMVQCDVR-----------------------------------PNAFTYNTL 268
             A +  D M    +R                                   P+  T++T+
Sbjct: 352 GEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTM 411

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G C  G  N+  ++     + G + D+FSY+ +I+G CK+  +++A+ LY ++     
Sbjct: 412 IHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSF 471

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KP    YN L +G  +  +   A++++ +M  ND +  T TY T I GLC
Sbjct: 472 KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLC 521



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 209/406 (51%), Gaps = 45/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    +N LLG   +N  ++  + ++++L    G  P+L TY+++++  CK+G       
Sbjct: 227 PDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGD 286

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R++ +   P+++T+ ++I GLC  + +  AA +++++   G  P+V+ YN+L+ G C
Sbjct: 287 VWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFC 346

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYE 186
             G    A   +  M+       V    N  +Y+I++ GL   G VDKA +L+ L  K +
Sbjct: 347 HAGRVGEAWKFWDSMS-------VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDD 399

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           +L+P++VT++++IHG C     N++  +L E    G + +  S + +++ LCK+G++D+A
Sbjct: 400 SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDA 459

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L + +     +PN+  YN L++GFC   K +    ++  M    C     +YN LI+G
Sbjct: 460 VKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHG 519

Query: 307 YCK-----------------------------------NKEVEEALSLYNELPFKGIKPT 331
            CK                                   +K+++ AL+L+N++  KG++  
Sbjct: 520 LCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTD 579

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDG 376
           VV +N L HGL    + + A +L  EM + N+   +  TY T +DG
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 171/336 (50%), Gaps = 8/336 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLN-SIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V+S+NI+L  L      D    L++ L     L PD+ T+S +I+  C+ G  +    I 
Sbjct: 369 VTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                S    +  +++S+I GLC + R+ +A  L+ K+     +PN   YN LING C+ 
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQA 488

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A+ ++ +M   +        P T+TY+ +I GLCK     +A     +M  +   
Sbjct: 489 SKFSDAIRVYSQMAEND------CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCM 542

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            +V TY SLI G C     + A  L  +++D+G+Q +VV  N++++ LC  GK+D AS+L
Sbjct: 543 LDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQL 602

Query: 250 LDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  M + +   PN  TYNTLMDGF  TG  ++   L++++   G   D  SYN  I G C
Sbjct: 603 LSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLC 662

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
                 E + L NE+   GI PT +T+N L   + +
Sbjct: 663 SCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 192/439 (43%), Gaps = 77/439 (17%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P ++++N++L  L K   +     +++R+ +    PD+ TY  +I+  C+   V    
Sbjct: 261 ASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAA 320

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE------------- 113
            ++  ++++   P+VV + SL+KG C   R+ EA   +  +   G               
Sbjct: 321 RVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLF 380

Query: 114 ----------------------PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
                                 P+++T++T+I+GLC  G    +L + +E      E+  
Sbjct: 381 DGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL-- 438

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
               +  +YS +I GLCK+G +D A +L+ ++  ++  PN   Y +LI+GFC A+ +++A
Sbjct: 439 ----DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +  +M +    P  ++ N +++ LCK  K   ASR    M++     +  TY +L+ G
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK----- 326
            C   KI+    L+  +   G + D   +NILI+G C   +V+EA  L +E+  K     
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614

Query: 327 -------------------------------GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
                                          G+ P +++YNT   GL    +    ++L 
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLL 674

Query: 356 VEMQGNDVAADTCTYRTFI 374
            EM  + +     T+   +
Sbjct: 675 NEMLASGIIPTAITWNILV 693



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 5/280 (1%)

Query: 100 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           A A F +L +F GC P V ++N L++   R      A   F  +++G    G    PN  
Sbjct: 103 ALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG--AFGRRIAPNLQ 160

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+I++  LC  G +D+A  LF  ++   L P+ +TY++L+ GF   N  + A  LL EM
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTYNTLMDGFCLTGK 277
               VQP+ V  N ++    +NG+ + A R+ + +V+     PN  TYN ++DG C  G 
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGM 280

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                +++  M +   + D  +Y  +I+G C++ +V+ A  +Y+E+   G+ P VV YN+
Sbjct: 281 FKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNS 340

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L  G     +   A K +  M  + +  +  +Y   + GL
Sbjct: 341 LLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGL 379



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 7/268 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S++ ++  L K+   D  + L+++++     P+ + Y+ LIN FC+  + S    ++ ++
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +  +P  +T+ +LI GLC   + +EA+    ++   GC  +V TY +LI GLCR    
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPN 191
             AL L+ ++ +         + + V ++I+I GLC  G VD+A +L  +MK +N   PN
Sbjct: 562 DGALALWNQILDKG------LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPN 615

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVTY +L+ GF     +++A  L + +++ G+ P+++S N  +  LC   +     +LL+
Sbjct: 616 VVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLN 675

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            M+   + P A T+N L+      G I 
Sbjct: 676 EMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC----DVRPNAFTYNTLMDGFCLTGK 277
           G  P V S N +++   +  +  +A      +        + PN  TYN ++   C+ G 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++R   LF S+   G   D  +Y+ L++G+ KN  ++ AL L +E+P   ++P  V YN 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAA-DTCTYRTFIDGLC 378
           L  G F   + E+A++++ ++  +  A+ +  TY   +DGLC
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 196/436 (44%), Gaps = 76/436 (17%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF  LL  L K    D    ++ ++ + G+ P L T++ +IN  CK G+V    +I   I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            R    PN  T+TSLI G C    +  A A+F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+++ +EM     E      P   TY+I +  LC  G   +A EL  +MK     PN+
Sbjct: 289 EEAMDMLEEMVQKGIE------PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-- 250
            T+T+LI G      +  A GL  +M+  G+ P  V+ N ++N+LC  G+ + A  +   
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 251 ---------------------------------DLMVQCDVRPNAFTYNTLMDGFCLTGK 277
                                            D M++    PN  TYNTL+ G+C  G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N    L   M+  G K D ++Y  LI+G+ +  ++E A SL+  +   GI P  VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 338 LFHGLFEIRQAERALKLFVEM--QGNDVAADT---------------------------- 367
           +  G F + + + AL LF +M   GN  ++ T                            
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 368 -----CTYRTFIDGLC 378
                 TY +FIDGLC
Sbjct: 583 LLPNVITYTSFIDGLC 598



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     ++T  ++FK + S G  P   TY+ +I CFC MG +    VI
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L++  +PNV+T+ +LI G C +  +  A  L   +K  G +P+  TY  LI+G  R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  M     E G+   PN VTY+ IIDG      VD A  LF +M     
Sbjct: 495 GGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +I GF   N  +EA+    +MV QG+ PNV++    ++ LC+NG+   A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK--ELFVSMESMGCKHDDFSYNILING 306
           +   M + +  PN +TY++L+ G C  G+    +   L   +   GC+ +  +Y  L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C      EA  L   +  KG++P+   Y  L  G  +  + E AL +F  M        
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 367 TCTYRTFIDGLC 378
              Y+  I  LC
Sbjct: 729 LSDYKALICALC 740



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 189/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L      +  + + + +   G+ P +YTY+I +   C  G  S    +
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVEL 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++ +    PN+ TFT+LI GL  + +   A  L+ K+ A G  P  +TYN LIN LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +FK M + +G +     P+T TY+ II   C  G + KA  +F +M     
Sbjct: 390 EGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+TY +LI+G+C   + N A  LL  M   G++P+  +   +++   + GK+++A+ 
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  + PN  TY  ++DG+    K++    LF  M   G      +YN++I+G+ 
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA +   ++  +G+ P V+TY +   GL    +   A K+F EM+  +   +  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 369 TYRTFIDGLC 378
           TY + I GLC
Sbjct: 624 TYSSLIYGLC 633



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 8/366 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N L+    K  + +  + L + +   GL PD +TY+ LI+ F + G++    
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++    +PN VT+T++I G    +++ +A ALF K+   G  P+  TYN +I+G 
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            +T     A N   +M            PN +TY+  IDGLC+ G    A ++F +M+  
Sbjct: 563 SKTNSISEAENFCGKMVKQG------LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAK--GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           N  PN+ TY+SLI+G C      +A+   LL  +   G +PNV +   ++  LC  G+  
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +L+  M +  ++P+   Y  L+ G C   K+     +F SM+++G +     Y  LI
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
              CK   +EEA  ++  +  K      V +  L  GL +  + +  LKL   M+  +  
Sbjct: 737 CALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCT 796

Query: 365 ADTCTY 370
            +  TY
Sbjct: 797 LNFQTY 802



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 183/403 (45%), Gaps = 36/403 (8%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+ P   P    NIL      +K+ D+VL  F  ++    F         ++CF  M   
Sbjct: 71  HLSPKLKPHHVVNIL----QTHKNTDSVLRFFFWISRRKFFKHD------MSCFVSM--- 117

Query: 63  SLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA---FGCEPNVIT 118
                   R++R   FAP       +IK    E  +       +++ +   FG    + +
Sbjct: 118 ------LNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY--TLCS 169

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           + TL+  L +     +A +++ +M N         +P+ +T++ +I+ LCK+G V +AK 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSG------IRPSLLTFNTMINILCKKGRVQEAKL 223

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +   +   +  PN  TYTSLI G C  ++ + A  +   MV  G  PN V+ + ++N LC
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G+++ A  +L+ MVQ  + P  +TY   +   C  G  +   EL   M+  GC  +  
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++  LI+G  ++ + E A+ LY+++   G+ PT VTYN L + L    + E A  +F  M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 359 QGNDVAADTCTYRTFIDGLCV-----RPQVRFTYARRKGNSGN 396
             +     T TY   I   C+     +  V F    + G+S N
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 8/278 (2%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D  L+LF ++   G  P   TY+++I+ F K   +S      G++++    PNV+T+TS 
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA--LNLFKEMTNG 145
           I GLC   R   A  +F +++     PN+ TY++LI GLC+ G    A   NL   +T+ 
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
             E      PN  TY+ ++ GLC EG   +A +L + M+ + L P+   Y +L+ G C  
Sbjct: 654 GCE------PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
                A  +   M   G Q ++     ++  LCK   ++ A  +   M++     +   +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAW 767

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             L+DG    G+ +   +L   MES  C  +  +Y +L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 44/263 (16%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQVSLG 65
           G L  ++ Y+ ++S F + NSI             GL P++ TY+  I+  C+ G+  L 
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA--LFTKLKAFGCEPNVITYNTLI 123
           F IF  + +  + PN+ T++SLI GLC E R  +A    L  +L  +GCEPNV TY TL+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666

Query: 124 NGLCRTGHTIVALNLFKEMTNGN-------------GE---------IGVVFKPNTV--- 158
            GLC  G    A  L   M                 GE         + + +  +T+   
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726

Query: 159 ----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                Y  +I  LCKE F+++A+ +F  M  ++ N + V +T L+ G     + +    L
Sbjct: 727 LHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKL 786

Query: 215 LIEMVDQGVQPNVVSSNVIMNEL 237
           L  M  +    N  +  ++  EL
Sbjct: 787 LHVMESRNCTLNFQTYVMLAREL 809



 Score = 38.1 bits (87), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  LL    KN   ++ L++F  ++++G    L  Y  LI   CK   +     I
Sbjct: 692 PSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCI 751

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  +L   +  + V +T L+ GL  E        L   +++  C  N  TY  L   L
Sbjct: 752 FQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 193/410 (47%), Gaps = 47/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS+FN LL  L +  +   +  LF  +    + PD+ TY IL+N  CK G V     +
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 69  FGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLIN 124
             R+    S    ++V   +++ GLC   R+ +A     +   +  GC PN +TYN L +
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             CR G   +A  + + M       GV   PN +T + I+ GLC+ G V  A + F + +
Sbjct: 249 ACCRVGDIDMACQIVERMEKE----GVT--PNVITMNTIVGGLCRVGRVGAALDFFREKR 302

Query: 185 YENLNP--NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV-------------- 228
              L    N VTY++L+  F H N+   A  L  EM DQG  P+ V              
Sbjct: 303 TTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGR 362

Query: 229 ---------------------SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
                                + N+++   C+  ++  A +L + M    ++P+ +TYNT
Sbjct: 363 LVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNT 422

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+   C  G  + V EL  +M   GC+    ++  L++GYCK  + +EAL ++  +    
Sbjct: 423 LLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEAR 482

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           I+P  V YNTL   L + R+ + A+KLF EM+ N+V A+  TY   + GL
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGL 532



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 11/362 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR +H   P   ++N L     +    D    + +R+   G+ P++ T + ++   C++G
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVG 289

Query: 61  QVSLGFVIFGRILRSCFAP---NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +V      F R  R+ +     N VT+++L+      + +  A  LF ++   G  P+ +
Sbjct: 290 RVGAALDFF-REKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAV 348

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            Y T+I+GL + G  + A N+   M          FK +   Y+I+I G C++  + +A 
Sbjct: 349 MYFTMISGLTQAGRLVDACNIAASMKKAG------FKLDRKAYNILIGGFCRKKRLHEAH 402

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +LF +MK   L P+V TY +L+   C A D++    LL  M+D G QP+VV+   +++  
Sbjct: 403 QLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGY 462

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK GK D A ++   M +  ++PN   YNTL+D  C + +++   +LF  M       + 
Sbjct: 463 CKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANV 522

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +YN L+ G       E+A  L +++  +   P  VT + L   L EI + ER LK F+E
Sbjct: 523 TTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETER-LKCFME 581

Query: 358 MQ 359
            +
Sbjct: 582 QR 583



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 13/341 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLF--KRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V + N ++G L +       L  F  KR   +    +  TYS L++ F     V+L  
Sbjct: 273 PNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAM 332

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +    + P+ V + ++I GL    R+V+A  +   +K  G + +   YN LI G 
Sbjct: 333 ELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGF 392

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR      A  LF+EM       G   +P+  TY+ ++  LCK G      EL   M  +
Sbjct: 393 CRKKRLHEAHQLFEEMK------GAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD 446

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+VVT+ +L+HG+C A   +EA  +   M +  +QPN V  N +++ LCK+ ++D A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVA 506

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L D M + +V  N  TYN L+ G        +  EL   M+   C  D  + ++L+  
Sbjct: 507 IKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEW 566

Query: 307 YCKNKEVEEALSLYNELPFKG-----IKPTVVTYNTLFHGL 342
             +  E E       +   KG     +KP  V   + +  L
Sbjct: 567 LPEIGETERLKCFMEQRDEKGGAKLTMKPPFVGTRSEYRQL 607



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 32/391 (8%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+P   ++  IL   L  +      LSL +   S GL  +LY           +G+ S  
Sbjct: 27  PTPNTPNATAILADLLHGHTPSTATLSLLR--ASPGLASELYGL---------IGEPSHA 75

Query: 66  FV------IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAFGCEPNVIT 118
           F       +     R C  P   +  S  K L   S   +AA+ L   L A    P+V T
Sbjct: 76  FTPASLATLHSLAARHCIPPPSASLLS--KLLARFSSPADAASFLRDSLAAGAPAPDVST 133

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N+L++ L R G+      LF  M   +       KP+ VTY I+++ LCK G V  A +
Sbjct: 134 FNSLLSALGRAGNLRGMTELFTSMREAS------VKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 179 LFLQMKY--ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--GVQPNVVSSNVIM 234
           +  +M     ++  ++V   +++ G C      +A   + E + Q  G  PN V+ N + 
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES--MG 292
           +  C+ G +D A ++++ M +  V PN  T NT++ G C  G++    + F    +  + 
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + +  +Y+ L++ +     V  A+ L++E+  +G  P  V Y T+  GL +  +   A 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +   M+      D   Y   I G C + ++
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRL 398


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 196/436 (44%), Gaps = 76/436 (17%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF  LL  L K    D    ++ ++ + G+ P L T++ +IN  CK G+V    +I   I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            R    PN  T+TSLI G C    +  A A+F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+++ +EM     E      P   TY+I +  LC  G   +A EL  +MK     PN+
Sbjct: 289 EEAMDMLEEMVQKGIE------PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-- 250
            T+T+LI G      +  A GL  +M+  G+ P  V+ N ++N+LC  G+ + A  +   
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 251 ---------------------------------DLMVQCDVRPNAFTYNTLMDGFCLTGK 277
                                            D M++    PN  TYNTL+ G+C  G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +N    L   M+  G K D ++Y  LI+G+ +  ++E A SL+  +   GI P  VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 338 LFHGLFEIRQAERALKLFVEM--QGNDVAADT---------------------------- 367
           +  G F + + + AL LF +M   GN  ++ T                            
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 368 -----CTYRTFIDGLC 378
                 TY +FIDGLC
Sbjct: 583 LLPNVITYTSFIDGLC 598



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L     ++T  ++FK + S G  P   TY+ +I CFC MG +    VI
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L++  +PNV+T+ +LI G C +  +  A  L   +K  G +P+  TY  LI+G  R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF  M     E G+   PN VTY+ IIDG      VD A  LF +M     
Sbjct: 495 GGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +I GF   N  +EA+    +MV QG+ PNV++    ++ LC+NG+   A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK--ELFVSMESMGCKHDDFSYNILING 306
           +   M + +  PN +TY++L+ G C  G+    +   L   +   GC+ +  +Y  L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            C      EA  L   +  KG++P+   Y  L  G  +  + E AL +F  M        
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 367 TCTYRTFIDGLC 378
              Y+  I  LC
Sbjct: 729 LSDYKALICALC 740



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 189/370 (51%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L      +  + + + +   G+ P +YTY+I +   C  G  S    +
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVEL 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++ +    PN+ TFT+LI GL  + +   A  L+ K+ A G  P  +TYN LIN LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +FK M + +G +     P+T TY+ II   C  G + KA  +F +M     
Sbjct: 390 EGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV+TY +LI+G+C   + N A  LL  M   G++P+  +   +++   + GK+++A+ 
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  + PN  TY  ++DG+    K++    LF  M   G      +YN++I+G+ 
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + EA +   ++  +G+ P V+TY +   GL    +   A K+F EM+  +   +  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 369 TYRTFIDGLC 378
           TY + I GLC
Sbjct: 624 TYSSLIYGLC 633



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 8/366 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N L+    K  + +  + L + +   GL PD +TY+ LI+ F + G++    
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  ++    +PN VT+T++I G    +++ +A ALF K+   G  P+  TYN +I+G 
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            +T     A N   +M            PN +TY+  IDGLC+ G    A ++F +M+  
Sbjct: 563 SKTNSISEAENFCGKMVKQG------LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAK--GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           N  PN+ TY+SLI+G C      +A+   LL  +   G +PNV +   ++  LC  G+  
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +L+  M +  ++P+   Y  L+ G C   K+     +F SM+++G +     Y  LI
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
              CK   +EEA  ++  +  K      V +  L  GL +  + +  LKL   M+  +  
Sbjct: 737 CALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCT 796

Query: 365 ADTCTY 370
            +  TY
Sbjct: 797 LNFQTY 802



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 183/403 (45%), Gaps = 36/403 (8%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+ P   P    NIL      +K+ D+VL  F  ++    F         ++CF  M   
Sbjct: 71  HLSPKLKPHHVVNIL----QTHKNTDSVLRFFFWISRRKFFKHD------MSCFVSM--- 117

Query: 63  SLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA---FGCEPNVIT 118
                   R++R   FAP       +IK    E  +       +++ +   FG    + +
Sbjct: 118 ------LNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGY--TLCS 169

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           + TL+  L +     +A +++ +M N         +P+ +T++ +I+ LCK+G V +AK 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSG------IRPSLLTFNTMINILCKKGRVQEAKL 223

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +   +   +  PN  TYTSLI G C  ++ + A  +   MV  G  PN V+ + ++N LC
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G+++ A  +L+ MVQ  + P  +TY   +   C  G  +   EL   M+  GC  +  
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++  LI+G  ++ + E A+ LY+++   G+ PT VTYN L + L    + E A  +F  M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 359 QGNDVAADTCTYRTFIDGLCV-----RPQVRFTYARRKGNSGN 396
             +     T TY   I   C+     +  V F    + G+S N
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 8/278 (2%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D  L+LF ++   G  P   TY+++I+ F K   +S      G++++    PNV+T+TS 
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA--LNLFKEMTNG 145
           I GLC   R   A  +F +++     PN+ TY++LI GLC+ G    A   NL   +T+ 
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
             E      PN  TY+ ++ GLC EG   +A +L + M+ + L P+   Y +L+ G C  
Sbjct: 654 GCE------PNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
                A  +   M   G Q ++     ++  LCK   ++ A  +   M++     +   +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVW 767

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             L+DG    G+ +   +L   MES  C  +  +Y +L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 44/263 (16%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSI-------------GLFPDLYTYSILINCFCKMGQVSLG 65
           G L  ++ Y+ ++S F + NSI             GL P++ TY+  I+  C+ G+  L 
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA--LFTKLKAFGCEPNVITYNTLI 123
           F IF  + +  + PN+ T++SLI GLC E R  +A    L  +L  +GCEPNV TY TL+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666

Query: 124 NGLCRTGHTIVALNLFKEMTNGN-------------GE---------IGVVFKPNTV--- 158
            GLC  G    A  L   M                 GE         + + +  +T+   
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726

Query: 159 ----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                Y  +I  LCKE F+++A+ +F  M  ++ N + V +T L+ G     + +    L
Sbjct: 727 LHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKL 786

Query: 215 LIEMVDQGVQPNVVSSNVIMNEL 237
           L  M  +    N  +  ++  EL
Sbjct: 787 LHVMESRNCTLNFQTYVMLAREL 809



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 48/118 (40%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  LL    KN   ++ L++F  ++++G    L  Y  LI   CK   +     I
Sbjct: 692 PSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCI 751

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  +L   +  + V +T L+ GL  E        L   +++  C  N  TY  L   L
Sbjct: 752 FQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 183/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRI 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN+VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKIDDANELFDEMLVK----GLV--PNSVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK+G +D
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q + R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKIDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+  +  +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 122/223 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  K+D+A+ L D M+   + PN+ T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            G  +    + A +    M   +   D   Y   I GLC   Q
Sbjct: 325 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQ 367



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DLY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 71  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 245 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK+ +++ A      +  +  +   V Y  L  GL  
Sbjct: 305 IDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCR 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             Q+  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 EGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   KI+   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKDGDLDTAFEHRK 341



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 169/312 (54%), Gaps = 6/312 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN L+  + K    ++  +L   +   G+ PD+YTY   +   CK G++     
Sbjct: 276 PPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVE 335

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      PN V FT+LI   C E  +     L  ++   G + +++ YN L NGLC
Sbjct: 336 MFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLC 395

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R      A ++ +EM N NG      KP+ VTY+ +IDG CKEG +D A E+  +M  E 
Sbjct: 396 RVRDLKAANDIVEEMRN-NG-----LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEG 449

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  + VTYT+LI G   +    +++ +L EM++ G++P+  +  ++++  CKN  +    
Sbjct: 450 VALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF 509

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL  M     +P   TYN +M+GFC+ G++     L  +M ++G   DD +YNIL++G+
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569

Query: 308 CKNKEVEEALSL 319
           CK+ +V +A  L
Sbjct: 570 CKHGKVRDAEEL 581



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 179/353 (50%), Gaps = 6/353 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           + + +L   G+ P+   +++L+    + G+++    +F  +LR    P VVTF +L+ G+
Sbjct: 230 AFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGM 289

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  S +  A AL   +   G  P+V TY   + GLC+ G    A+ +F+EM     E GV
Sbjct: 290 CKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR----ERGV 345

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PNTV ++ +ID  CKEG V    EL  +M    +  ++V Y +L +G C   D   A
Sbjct: 346 --NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             ++ EM + G++P+ V+   +++  CK G++D A  +   M    V  +  TY TL+ G
Sbjct: 404 NDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
              +G+    + +   M   G + D+ +Y ++I+ +CKN +V+    L  E+  KG KP 
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPG 523

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           VVTYN + +G   + Q + A  L   M    V  D  TY   +DG C   +VR
Sbjct: 524 VVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVR 576



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 103/206 (50%)

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           V +A   +LQ+    + P    +  L+     +     A+ +  EM+ +GV P VV+ N 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +M+ +CK   +++A+ L  LM +  V P+ +TY   M G C  G+I    E+F  M   G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              +   +  LI+ +CK   V   L L+ E+  +GIK  +V YN L +GL  +R  + A 
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
            +  EM+ N +  D  TY T IDG C
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFC 430


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 190/438 (43%), Gaps = 60/438 (13%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H    PP   +F+I    L +    D  L++ + +   G  PD   Y  +I+  C  G
Sbjct: 162 MVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQG 221

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            V+    +   +     + +V TF  ++ GLC   R+ EAA L  ++   GC PN ITY 
Sbjct: 222 GVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYG 281

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGN-----------------GEIGVVFK--------P 155
            L+ GLC       A  +   +   N                  E   +++        P
Sbjct: 282 FLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPP 341

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  TYSI+I GLCK G +  A +L  +M+ +   P++VTYT L+H FC    W+  + +L
Sbjct: 342 DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAML 401

Query: 216 -----------------------------------IEMVDQGVQPNVVSSNVIMNELCKN 240
                                               EM  QG +P++ + N I+  LC N
Sbjct: 402 EVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            +M+ A  L + ++   V  NA TYNTL+      G       L   M   GC  D  SY
Sbjct: 462 NQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSY 521

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI   C++  V+ ++ L +E+  KGIKP  V+YN L   L + R+   AL+L  EM  
Sbjct: 522 NGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLN 581

Query: 361 NDVAADTCTYRTFIDGLC 378
            ++  D  TY T I+GLC
Sbjct: 582 QELTPDIVTYNTLINGLC 599



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 38/408 (9%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQ 61
           H     P   S+N +L   A+   +  VLSL++R+ +   + P  +T+SI     C++G+
Sbjct: 128 HRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGR 187

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                 +   + R    P+ V + ++I  LCA+  + EAA L  ++   GC  +V T+N 
Sbjct: 188 ADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFND 247

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK---- 177
           +++GLC  G    A  L   M       G V  PN +TY  ++ GLC    V++A+    
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIR----GCV--PNAITYGFLLKGLCLASQVEEARTMLG 301

Query: 178 ---------------------------ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
                                      EL+  M  +   P+  TY+ LIHG C       
Sbjct: 302 RVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGS 361

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LL EM D+G  P++V+  ++++  C+NG  DN   +L++M    +  N   YN ++ 
Sbjct: 362 AMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMIC 421

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C   +++        M+S G K D  +YN +I   C N ++EEA  L+  L  +G+  
Sbjct: 422 AVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVA 481

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +TYNTL H L      + A+ L  +M  +  + D  +Y   I  LC
Sbjct: 482 NAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 168/363 (46%), Gaps = 43/363 (11%)

Query: 14  FNILLG-CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN ++G CL   K  +    L++ + S G  PD +TYSILI+  CK+G++     +   +
Sbjct: 311 FNTVIGRCLLDGKLKEAA-ELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               FAP++VT+T L+   C         A+   +   G   N+  YN +I  +C+    
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+   +EM +        +KP+  TY+ II  LC    +++A+ LF  + +E +  N 
Sbjct: 430 DDAMRFMQEMKSQG------YKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANA 483

Query: 193 VTYTSLIHGFCHANDWNEAKGL-----------------------------------LIE 217
           +TY +LIH       W +A  L                                   L E
Sbjct: 484 ITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSE 543

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M ++G++PN VS N++++ELCK  ++ +A  L   M+  ++ P+  TYNTL++G C  G 
Sbjct: 544 MAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGW 603

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   + +     D  +YNILI+ +CK + + +A  L N     GI P   T+  
Sbjct: 604 MHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGI 663

Query: 338 LFH 340
           +  
Sbjct: 664 MVQ 666



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 149/301 (49%), Gaps = 6/301 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ ILL    +N  +D + ++ + ++  GL  +L  Y+ +I   CK  ++      
Sbjct: 376 PSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRF 435

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    + P++ T+ ++I  LC  +++ EA  LF  L   G   N ITYNTLI+ L R
Sbjct: 436 MQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLR 495

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L  +M      + +V      +Y+ +I  LC++G VD++  L  +M  + +
Sbjct: 496 NGSWQDAISLANDMVLHGCSLDIV------SYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V+Y  LI   C      +A  L  EM++Q + P++V+ N ++N LCK G M  A  
Sbjct: 550 KPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALN 609

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ +   DV  +  TYN L+   C    ++    L     + G   ++ ++ I++  + 
Sbjct: 610 LLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFV 669

Query: 309 K 309
           +
Sbjct: 670 R 670



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 6/179 (3%)

Query: 211 AKGLLIEMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFT 264
           A G  + ++DQ      V P+  S N ++    +     +   L   MV  D V P  FT
Sbjct: 115 APGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFT 174

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           ++      C  G+ +    +  SM   GC  D   Y  +I+  C    V EA +L +E+ 
Sbjct: 175 FSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMF 234

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             G    V T+N + HGL  + +   A +L   M       +  TY   + GLC+  QV
Sbjct: 235 LMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 10/163 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N L+  L ++ + D  + L   +   G+ P+  +Y++LI+  CK  +V     +  
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC--R 128
            +L     P++VT+ +LI GLC    +  A  L  KL       ++ITYN LI+  C  R
Sbjct: 578 EMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             H    L L + +T+G         PN  T+ I++    ++ 
Sbjct: 638 LLHDASML-LNRAVTSG-------ITPNERTWGIMVQNFVRKS 672



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD------FSYNILINGYCKNK 311
           V P+  +YNT++  F        V  L+  M      H D      F+++I     C+  
Sbjct: 132 VSPSFRSYNTVLAAFARADCHTDVLSLYRRM-----VHRDRVPPTTFTFSIAARALCRLG 186

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
             +EAL++   +   G  P  V Y T+ H L        A  L  EM     +AD  T+ 
Sbjct: 187 RADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFN 246

Query: 372 TFIDGLCVRPQVR 384
             + GLC   ++R
Sbjct: 247 DIVHGLCTLGRLR 259



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K       L+L ++L++  +  D+ TY+ILI+  CK   +    ++
Sbjct: 586 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASML 645

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAES 95
             R + S   PN  T+  +++    +S
Sbjct: 646 LNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 181/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ +
Sbjct: 95  HKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWI 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + +   L   + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A +LF EM +     G+V  PN VT++ +IDG CK G VD A E + QM 
Sbjct: 215 GLCKESKMNEANDLFNEMLDK----GLV--PNGVTFTTLIDGHCKNGKVDSAMETYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +   P+++TY +LI+G C   D  +A+ LL EM  +G++P+ ++   +++  CK G +D
Sbjct: 269 SQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLD 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  L + MV+  +R +   Y  L+ G C  G+    +++   M S+G K D+ +Y ++I
Sbjct: 329 SAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK ++V+ A  L  E+  +G  P VVT
Sbjct: 389 NEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G     L+   ++ N     GV  +P+  TYS++I+GLCKE  +++A 
Sbjct: 173 SFNTLMNGYIRLGD----LDQGFKLKNAMHASGV--QPDVYTYSVLINGLCKESKMNEAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +LF +M  + L PN VT+T+LI G C     + A     +M+ Q   P++++ N ++  L
Sbjct: 227 DLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  LLD M    ++P+  TY TL+DG C  G ++   EL  +M     + DD
Sbjct: 287 CKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +    + A KL  E
Sbjct: 347 VAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LIN + + G V      F             T   +++ L            +
Sbjct: 65  DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+  +L   M    + P+V TY+ LI+G C  +  NEA  L  EM+D+G+ 
Sbjct: 179 NGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNGK+D+A      M+     P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A  L   +  + I+   V Y  L  GL +
Sbjct: 299 LDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +A  A K+  EM    +  D  TY   I+  C +  V+
Sbjct: 359 EGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVK 398



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 8/228 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    +    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V      + ++L  CF P+++T+ +LI GLC +  + +A  L  +++  G +P+ ITY T
Sbjct: 257 VDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A  L + M   +       + + V Y+ +I GLC+EG    A+++  
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKES------IRLDDVAYTALISGLCQEGRATDAEKMLR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D   A  LL EM  QG  P VV+
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 183/366 (50%), Gaps = 8/366 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ IL+    K    D  +   K +  +GL  DL  Y+ LI  FC  G++  G  +F  +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    +P  +T+ +LI+G C   ++ EA+ +F  +   G  PNV TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L   M   + E      PN VTY+III+ LCK+G V  A E+   MK     P+ 
Sbjct: 334 KEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +TY  L+ G C   D +EA  LL  M+       P+V+S N +++ LCK  ++  A  + 
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           DL+V+     +  T N L++     G +N+  EL+  +       +  +Y  +I+G+CK 
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +  A  L  ++    ++P+V  YN L   L +    ++A +LF EMQ ++   D  ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567

Query: 371 RTFIDG 376
              IDG
Sbjct: 568 NIMIDG 573



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 189/371 (50%), Gaps = 10/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NILL  L +N      +SL + +    L PD+++Y+ +I  FC+  ++     +  
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S  + ++VT+  LI   C   ++ EA     ++K  G E +++ Y +LI G C  G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 131 HTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                  LF E +  G+        P  +TY+ +I G CK G + +A E+F  M    + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV TYT LI G C      EA  LL  M+++  +PN V+ N+I+N+LCK+G + +A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILINGY 307
           ++LM +   RP+  TYN L+ G C  G ++   +L   M  +S     D  SYN LI+G 
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   + +AL +Y+ L  K      VT N L +   +     +A++L+ ++  + +  ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 368 CTYRTFIDGLC 378
            TY   IDG C
Sbjct: 495 DTYTAMIDGFC 505



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 8/366 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N L+  L ++++++   S ++++     F +  + S L+ C+ +M +    F +   +L+
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
             FA NV     L+KGLC      +A +L  +++     P+V +YNT+I G C       
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL L  EM  G+G        + VT+ I+ID  CK G +D+A     +MK+  L  ++V 
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           YTSLI GFC   + +  K L  E++++G  P  ++ N ++   CK G++  AS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  VRPN +TY  L+DG C  GK     +L   M     + +  +YNI+IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRT 372
           +A+ +   +  +  +P  +TYN L  GL      + A KL   M  +      D  +Y  
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 373 FIDGLC 378
            I GLC
Sbjct: 430 LIHGLC 435



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 8/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  TY+I+IN  CK G V+    I   + +    P+ +T+  L+ GLCA+  + EA+ L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409

Query: 104 -FTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
            +  LK     +P+VI+YN LI+GLC+      AL+++  +    G        + VT +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTN 463

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+++   K G V+KA EL+ Q+    +  N  TYT++I GFC     N AKGLL +M   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            +QP+V   N +++ LCK G +D A RL + M + +  P+  ++N ++DG    G I   
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           + L V M   G   D F+Y+ LIN + K   ++EA+S ++++   G +P     +++   
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                + ++  +L  ++   D+  D     T +D +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V+ + L+  +        A G+L  M+ +G   NV + N+++  LC+N +   A  LL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  + P+ F+YNT++ GFC   ++ +  EL   M+  GC     ++ ILI+ +CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +++EA+    E+ F G++  +V Y +L  G  +  + +R   LF E+     +    TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 371 RTFIDGLCVRPQVR 384
            T I G C   Q++
Sbjct: 286 NTLIRGFCKLGQLK 299



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 7/237 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NILL    K    +  + L+K+++   +  +  TY+ +I+ FCK G +++   +  ++  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S   P+V  +  L+  LC E  + +A  LF +++     P+V+++N +I+G  + G    
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A +L   M+           P+  TYS +I+   K G++D+A   F +M      P+   
Sbjct: 583 AESLLVGMSRAG------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC-KNGKMDNASRLL 250
             S++       + ++   L+ ++VD+ +  +   +  +M+ +C  +  MD A RLL
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 15/203 (7%)

Query: 188 LNPNVVTYTSLIHGFCHAN--------DWN----EAKGLLIEMVDQGVQPNVVSSNVIMN 235
           LNP V  Y+ L++ F            D N     A  +  + VD G       +N +M 
Sbjct: 24  LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNN-LMA 80

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           +L ++   + A      M++ D   N  + + L++ +    K      +   M   G   
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           + +++NIL+ G C+N E  +A+SL  E+    + P V +YNT+  G  E ++ E+AL+L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
            EM+G+  +    T+   ID  C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFC 223



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L K    D    LF+ +     FPD+ +++I+I+   K G +     +
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+  +P++ T++ LI        + EA + F K+   G EP+    ++++     
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646

Query: 129 TGHTIVALNLFKEMTNGN 146
            G T     L K++ + +
Sbjct: 647 QGETDKLTELVKKLVDKD 664


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 188/370 (50%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  ++  L   K       L +++   GL P++  YS LI  +   G++     +
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S  AP++  + ++I  L    ++ EA+    +++  G +P+ +T+   I G  +
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A   F EM +          PN   Y+++I+G  K G + +A  +F  +    +
Sbjct: 467 TGKMTEAAKYFDEMLDHG------LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T ++ IHG        EA  +  E+ ++G+ P+V + + +++  CK G+++ A  
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M    + PN F YN L+DG C +G I R ++LF  M   G + D  +Y+ +I+GYC
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K++ V EA SL++E+P KG++P    YN L HG  +    E+A+ LF EM     A  T 
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TL 699

Query: 369 TYRTFIDGLC 378
           ++ T IDG C
Sbjct: 700 SFNTLIDGYC 709



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 7/354 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            LS+F+ L+++G+ PD+ T S  I+   K G+V     +F  +      P+V T++SLI 
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C +  + +A  L  ++   G  PN+  YN L++GLC++G    A  LF    +G  E 
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF----DGMPEK 623

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+  +P++VTYS +IDG CK   V +A  LF +M  + + P+   Y +L+HG C   D  
Sbjct: 624 GL--EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 681

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  L  EM+ +G     +S N +++  CK+ K+  AS+L   M+   + P+  TY T++
Sbjct: 682 KAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           D  C  GK+     LF  M+      D  +Y  L+ GY K  +  E  +L+ ++  KG+K
Sbjct: 741 DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 800

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           P  VTY  + +   +      A KL  E+ G  +      +   I  LC R  +
Sbjct: 801 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 854



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 44/412 (10%)

Query: 2   RHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           RH+H     P V + +  +  L KN      L +F  L   GL PD++TYS LI+ FCK 
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G+V   F +   +     APN+  + +L+ GLC    I  A  LF  +   G EP+ +TY
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           +T+I+G C++ +   A +LF EM +     GV  +P++  Y+ ++ G CKEG ++KA  L
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSK----GV--QPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +M  +      +++ +LI G+C +    EA  L  EM+ + + P+ V+   +++  CK
Sbjct: 687 FREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            GKM+ A+ L   M + ++  +  TY +LM G+   G+ + V  LF  M + G K D+ +
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 300 Y-----------------------------------NILINGYCKNKEVEEALSLYNELP 324
           Y                                   ++LI   CK +++ EA  L +E+ 
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 865

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             G+KP++   +TL     E  + + A ++F  ++   +  DT T    ++G
Sbjct: 866 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 8/380 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +     I
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266

Query: 69  FGRILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              ++ SC  P N++T+  LI GLC   ++ +AA +   +   GC+PN  T+  LI G C
Sbjct: 267 -KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R  +   AL L  EM   N        P+ V+Y  +I+GLC    +  A +L  +M +  
Sbjct: 326 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PNVV Y++LI G+       EA+ LL  M   GV P++   N I++ L K GKM+ AS
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             L  +    ++P+A T+   + G+  TGK+    + F  M   G   ++  Y +LING+
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   + EALS++  L   G+ P V T +   HGL +  + + ALK+F E++   +  D 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            TY + I G C + +V   +
Sbjct: 560 FTYSSLISGFCKQGEVEKAF 579



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 6/381 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++N+L+  L K    +    + K + ++G  P+  T+ +LI  +C+   +     
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +    P+ V++ ++I GLC    +  A  L  K+   G +PNV+ Y+TLI G  
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L   M+      GV   P+   Y+ II  L K G +++A    L+++   
Sbjct: 396 SEGRIEEARRLLDGMSCS----GVA--PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VT+ + I G+       EA     EM+D G+ PN     V++N   K G +  A 
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   +    V P+  T +  + G    G++    ++F  ++  G   D F+Y+ LI+G+
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  EVE+A  L++E+  KGI P +  YN L  GL +    +RA KLF  M    +  D+
Sbjct: 570 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 629

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TY T IDG C    V   ++
Sbjct: 630 VTYSTMIDGYCKSENVAEAFS 650



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 19/308 (6%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
            T +I+   + S I+++  LF      G  P  + ++ LI+   R G    A N+F    
Sbjct: 127 LTQMIRTPYSSSSILDSV-LFWFRNYGGSSP--VVFDILIDSYKRMGMLDEAANVFFVAK 183

Query: 144 NGN--------------GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           N +              GE G+V  PNT TY+II  GLC+   +++AK  F +M+   L 
Sbjct: 184 NDSILISLIRCNSLRSMGEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 241

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+    ++LI GF    D +E   +   MV  G+  N+++ NV+++ LCK GKM+ A+ +
Sbjct: 242 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 301

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  M+    +PN+ T+  L++G+C    + R  EL   ME         SY  +ING C 
Sbjct: 302 LKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 361

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            K++  A  L  ++ F G+KP VV Y+TL  G     + E A +L   M  + VA D   
Sbjct: 362 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421

Query: 370 YRTFIDGL 377
           Y   I  L
Sbjct: 422 YNAIISCL 429



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 6/242 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SFN L+    K+        LF+ + +  + PD  TY+ +I+  CK G++    ++F  +
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  + VT+TSL+ G     +  E  ALF K+ A G +P+ +TY  +I   C+  + 
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 819

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A  L  E+      +G         + ++I  LCK   + +A +L  +M    L P++
Sbjct: 820 VEAFKLRDEV------VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 873

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
              ++L+  F  A   +EA  +   +   G+ P+  +   ++N    +   ++A  L+  
Sbjct: 874 AACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQ 933

Query: 253 MV 254
           +V
Sbjct: 934 LV 935


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G +D A +++ QM 
Sbjct: 215 GLCKESRMDEANGLFGEMLD-NGLV-----PNGVTFTTLIDGHCKNGRLDLAMDIYRQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  +P+VVTY +LI+G C   D  +A+ LL EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + M++  +R +   Y  L+ G C  G+    +++   M  +G K DD +Y +++
Sbjct: 329 TAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIM 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V++A  L  E+   G  P VVT
Sbjct: 389 NEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 149/293 (50%), Gaps = 6/293 (2%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL   +  ++  F  L+   C E  +  A ++F  +  +G  P+V+++NTL+NG  +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L     N     GV  +P+  TYS++I+GLCKE  +D+A  LF +M    L
Sbjct: 184 LGDLDEGFRL----KNAMRASGV--QPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGL 237

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VT+T+LI G C     + A  +  +M++QG  P+VV+ N ++  LCK G +  A  
Sbjct: 238 VPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARY 297

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M +  ++P+  TY TL+DG C  G +    EL   M     + DD  Y  LI G C
Sbjct: 298 LLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLC 357

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           +     +A  +  E+   G+KP   TY  + +   +    ++A +L  EMQ N
Sbjct: 358 QEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRN 410



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 161/340 (47%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      F    +  F     T  ++++ L            +
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  K G +D+   L   M+   + P+V TY+ LI+G C  +  +EA GL  EM+D G+ 
Sbjct: 179 NGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+     P+  TYNTL+ G C  G + + + L
Sbjct: 239 PNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E A  L   +  + I+   V Y  L  GL +
Sbjct: 299 LDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +A  A K+  EM    +  D  TY   ++  C +  V+
Sbjct: 359 EGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVK 398



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   +++    LF  M   G   +  ++  LI+G+CKN  ++ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  +G  P VVTYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 DIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  R+
Sbjct: 322 CKEGDLETAFELRE 335


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 197/393 (50%), Gaps = 40/393 (10%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D+ L+LF ++   GLFP+  TYS+LI   C  G +     ++ ++  +   P+V    SL
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 88  IKG----------------------------------LCAESRIVEAAALFTKLKAFGCE 113
           ++G                                  LC   ++ EA +L   +   G  
Sbjct: 402 LRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 461

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PNV++YN +I G CR G+  +A ++F +M      +    KPN VTYSI+IDG  K+G  
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDM------LARDLKPNVVTYSILIDGNFKKGDS 515

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +KA +LF QM   N+ P   T+ ++I+G C     +EA+  L   +++G  P+ ++ N I
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 575

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++   K G +D+A  +   M +  V PN  TY +L++GFC + +I+   +    M   G 
Sbjct: 576 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 635

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D  +Y+ LI+G+CK +++E A  L+ EL   G+ P  + YN++  G  ++   E AL 
Sbjct: 636 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 695

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            + +M  + +  D  TY T IDGL    ++ F 
Sbjct: 696 WYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 728



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 190/365 (52%), Gaps = 14/365 (3%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           ++  CL K    +     F+     G+  D   YSI+I   CK    +LG  +   +   
Sbjct: 226 MVRACL-KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKER 284

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
            + P+  TFTS+I    A+  +VEA  L  ++   G   N++   +L+ G C  G+   A
Sbjct: 285 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 344

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           LNLF ++T    E G+   PN VTYS++I+G C  G ++KA EL+ QMK   + P+V   
Sbjct: 345 LNLFNKIT----EDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            SL+ G+  A  W EA  L  E VD GV  N+ + N++M+ LCK GKMD A  LLD MV 
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + PN  +YN ++ G C  G ++    +F  M +   K +  +Y+ILI+G  K  + E+
Sbjct: 458 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA---LKLFVEMQGNDVAADTCTYRT 372
           AL L++++    I PT  T+NT+ +GL ++ Q   A   LK F+E           TY +
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE---EGFIPSCMTYNS 574

Query: 373 FIDGL 377
            +DG 
Sbjct: 575 IVDGF 579



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 189/372 (50%), Gaps = 14/372 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++    +  + D   S+F  + +  L P++ TYSILI+   K G       +
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 521

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L    AP   TF ++I GLC   ++ EA          G  P+ +TYN++++G  +
Sbjct: 522 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 581

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL +++EM     E GV   PN VTY+ +I+G CK   +D A +   +M+ + L
Sbjct: 582 EGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 635

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA-- 246
             +V  Y++LI GFC   D   A+ L  E+++ G+ PN +  N +++       M+ A  
Sbjct: 636 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 695

Query: 247 --SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
              ++++  + CD+     TY TL+DG    G++    +L++ M S G   D  ++++L+
Sbjct: 696 WYKKMINDRIPCDLG----TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NG C   ++E A  +  E+  K + P+V+ YNTL  G F     + A  L  EM    + 
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811

Query: 365 ADTCTYRTFIDG 376
            D  TY   I+G
Sbjct: 812 PDDVTYDILING 823



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 194/380 (51%), Gaps = 8/380 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+     P   +  ++++ C+A+    +  L L + + + G   +L   + L+  +C  G
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEA-LRLKEEMINCGKPMNLVVATSLMKGYCAQG 339

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F +I      PN VT++ LI+G C    I +A+ L+T++K  G  P+V   N
Sbjct: 340 NLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 399

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +L+ G  +      A  LF E      + GV    N  TY+I++  LCK G +D+A  L 
Sbjct: 400 SLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + + PNVV+Y  +I G C   + + A  +  +M+ + ++PNVV+ +++++   K 
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G  + A  L D M+  ++ P  FT+NT+++G C  G+++  ++   +    G      +Y
Sbjct: 513 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTY 572

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +++G+ K   ++ AL++Y E+   G+ P VVTY +L +G  +  + + ALK   EM+ 
Sbjct: 573 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 632

Query: 361 NDVAADTCTYRTFIDGLCVR 380
             +  D   Y   IDG C R
Sbjct: 633 KGLELDVTAYSALIDGFCKR 652



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V + N LL    K   ++    LF      G+  +++TY+I+++  CK G++     
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACS 450

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++     PNVV++  +I G C +  +  A+++F+ + A   +PNV+TY+ LI+G  
Sbjct: 451 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G +  AL+LF +M + N        P   T++ II+GLCK G + +A++       E 
Sbjct: 511 KKGDSEKALDLFDQMLSLN------IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ +TY S++ GF    + + A  +  EM + GV PNVV+   ++N  CK+ ++D A 
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +  D M +  +  +   Y+ L+DGFC    +   ++LF  +  +G   +   YN +I+G+
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                +E AL  Y ++    I   + TY TL  GL +  +   A  L++EM    +  D 
Sbjct: 685 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 744

Query: 368 CTYRTFIDGLCVRPQVR 384
            T+   ++GLC + Q+ 
Sbjct: 745 ITFHVLVNGLCNKGQLE 761



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 9/344 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+    K    +  L LF ++ S+ + P  +T++ +IN  CK+GQ+S     
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               L   F P+ +T+ S++ G   E  I  A A++ ++  FG  PNV+TY +LING C+
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +    +AL    EM     E+ V        YS +IDG CK   ++ A++LF ++    L
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVT------AYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN + Y S+I GF   N+   A     +M++  +  ++ +   +++ L K G++  AS 
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + P+  T++ L++G C  G++   +++   M+          YN LI GY 
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           +   ++EA +L++E+  +G+ P  VTY+ L +G F   + +R+L
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKF---KGDRSL 831



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 158/398 (39%), Gaps = 29/398 (7%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKM-- 59
            +H    P+S  +++   L       + L  FKR  +  G    +  Y +L++   +   
Sbjct: 50  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 109

Query: 60  --------------GQVSLGFVIFGRILRSC-----FAPNVVTFTSLIKGLCAESRIVEA 100
                         G      V+F   L +C     F  +   F  L+      +RI  A
Sbjct: 110 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 169

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              F  +      P V   N L+  L R        +L+ +M    G  G  F     T 
Sbjct: 170 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV-LRGIYGDHF-----TV 223

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            +++    KEG V++A+E F + K   +  +   Y+ +I   C   + N    LL EM +
Sbjct: 224 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE 283

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  P+  +   ++      G M  A RL + M+ C    N     +LM G+C  G ++ 
Sbjct: 284 RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 343

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              LF  +   G   +  +Y++LI G C +  +E+A  LY ++   GI P+V   N+L  
Sbjct: 344 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 403

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  +    E A KLF E     V A+  TY   +  LC
Sbjct: 404 GYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLC 440



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++  L+  L K         L+  + S G+ PD+ T+ +L+N  C  GQ+     
Sbjct: 706 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 765

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           I   + R    P+V+ + +LI G   E  + EA  L  ++   G  P+ +TY+ LING
Sbjct: 766 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 8/373 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SFN+++  L +  + D  + +F+ ++      D YTYS L++  C  G++     +   +
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN V F  LI  LC +  +  A+ L   +   GC PN +TYN+L++GLC  G  
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++L   M      +     PN +T+  ++DG  K G       + + ++ +    N 
Sbjct: 297 DKAMSLLNRM------VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNE 350

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            +Y+SLI G            L  EMV++G +PN +  + +++ LC+ GK D A   L  
Sbjct: 351 FSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIE 410

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M      PN+FTY++LM G+   G I++   ++  M    C H +  Y+ILING CKN +
Sbjct: 411 MKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGK 470

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAADTCTY 370
           ++EAL ++ ++  +GIK  VV Y+++ HG    +  E+ +KLF +M      +  D  TY
Sbjct: 471 LKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTY 530

Query: 371 RTFIDGLCVRPQV 383
              ++  C +  V
Sbjct: 531 NILLNAFCTKNSV 543



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 172/337 (51%), Gaps = 9/337 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P PV+ FN+L+  L K         L   +   G  P+  TY+ L++  C  G++     
Sbjct: 243 PNPVA-FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMS 301

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R++ +   PN +TF +L+ G     R ++   +   L+  G   N  +Y++LI+GL 
Sbjct: 302 LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF 361

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + L+KEM     E G   KPNT+ YS +IDGLC+EG  D+AKE  ++MK + 
Sbjct: 362 KEGKGEHGMQLWKEMV----EKGC--KPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG 415

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN  TY+SL+ G+  A D ++A  +  EM D     + V  ++++N LCKNGK+  A 
Sbjct: 416 HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 475

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILIN 305
            +   M+   ++ +   Y++++ GFC    + +  +LF  M   +   + D  +YNIL+N
Sbjct: 476 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 535

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            +C    V  A+ + N +  +G  P  +T +     L
Sbjct: 536 AFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 182/360 (50%), Gaps = 14/360 (3%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV----TFTSLIKGLCAESRIVEA 100
           DL  YS++ N        SL F    ++L      N V    +F  + K         +A
Sbjct: 65  DLSFYSLIENF-----SNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKA 119

Query: 101 AALFTKLKA-FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
             LF ++ A F C+  V ++NT++N + + G   +AL  +  + + N    +  +PN ++
Sbjct: 120 LDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI--QPNGLS 177

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++++I  LC+ G VD+A E+F  M   N   +  TY++L+HG C+    +EA  LL EM 
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G  PN V+ NV+++ LCK G +  AS+L+D M      PN  TYN+L+ G CL GK++
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +   L   M +  C  +D ++  L++G+ K+    + + +   L  KG +    +Y++L 
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 357

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
            GLF+  + E  ++L+ EM       +T  Y   IDGLC   +P     Y     N G+T
Sbjct: 358 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 417



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 178/371 (47%), Gaps = 11/371 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           SF I+     K       L LF R+ +       + +++ ++N   + G   L    +  
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161

Query: 72  ILRSC----FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ S       PN ++F  +IK LC    + +A  +F  +    C  +  TY+TL++GLC
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC 221

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A++L  EM     ++   F PN V ++++I  LCK+G + +A +L   M  + 
Sbjct: 222 NEGRIDEAVSLLDEM-----QVEGTF-PNPVAFNVLISALCKKGDLSRASKLVDNMFLKG 275

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VTY SL+HG C     ++A  LL  MV     PN ++   +++   K+G+  +  
Sbjct: 276 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGV 335

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R+L  + +   R N F+Y++L+ G    GK     +L+  M   GCK +   Y+ LI+G 
Sbjct: 336 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 395

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+  + +EA     E+  KG  P   TY++L  G FE     +A+ ++ EM  ND     
Sbjct: 396 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 455

Query: 368 CTYRTFIDGLC 378
             Y   I+GLC
Sbjct: 456 VCYSILINGLC 466



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 177/387 (45%), Gaps = 73/387 (18%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+  L      D  +SL   +   G FP+   +++LI+  CK G +S    +   +
Sbjct: 212 TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 271

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN VT+ SL+ GLC + ++ +A +L  ++ A  C PN IT+ TL++G  + G  
Sbjct: 272 FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRA 331

Query: 133 I------VALN-----------------LFKEMTNGNGEIGVVF---------KPNTVTY 160
           +      V+L                  LFKE   G GE G+           KPNT+ Y
Sbjct: 332 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKE---GKGEHGMQLWKEMVEKGCKPNTIVY 388

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +IDGLC+EG  D+AKE  ++MK +   PN  TY+SL+ G+  A D ++A  +  EM D
Sbjct: 389 SALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTD 448

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNA----SRLLDLMVQCDV------------------ 258
                + V  ++++N LCKNGK+  A     ++L   ++ DV                  
Sbjct: 449 NDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQ 508

Query: 259 ---------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                          +P+  TYN L++ FC    ++R  ++  +M   GC  D  + +I 
Sbjct: 509 GMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIF 568

Query: 304 INGYCKNKE-VEEALSLYNELPFKGIK 329
           +     N +  ++     +EL  + IK
Sbjct: 569 LKTLRDNMDPPQDGREFLDELVVRLIK 595



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S++ L+  L K    +  + L+K +   G  P+   YS LI+  C+ G+          +
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN  T++SL+ G      I +A  ++ ++    C  + + Y+ LINGLC+ G  
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN--LNP 190
             AL ++K+M +         K + V YS +I G C    V++  +LF QM   N  L P
Sbjct: 472 KEALIVWKQMLSRG------IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 525

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--------------- 235
           +VVTY  L++ FC  N  + A  +L  M+DQG  P+ ++ ++ +                
Sbjct: 526 DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREF 585

Query: 236 ------ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                  L K  +   AS ++++M+Q  + P   T+   +   C   K+ +
Sbjct: 586 LDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRK 636


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 186/399 (46%), Gaps = 29/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L +    + + SL   +    L P++  Y+ +I+  CK    S   V+
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+ +TF++LI GLC E R+ EA  L  +   +   PN+ +Y +LI+G C 
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
            G  IVA NL  EM        VV                               P+   
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I GLCK+  +  A+ L  +M  +N++P+   YT+LI GF      +EA+ +   M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+VV  N ++   C+ G M+ A   +  M +    P+ FTY TL+ G+   G I+
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M    C+ +  +Y+ LINGYCK  + + A  L+  +  +G+ P V+TY  L 
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             LF+  +  RA   F  M  N  + +  T  + + GLC
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 177/346 (51%), Gaps = 6/346 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L L +     G  P+   Y++LI+ +C+ G V  G ++ G +      P VVT+ +L+  
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSW 338

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           L  +  + + A+L ++++     PNV  YN++I+ LC+      AL + K+M  G  +  
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD-- 396

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ +T+S +I GLC+EG V +A+ L  +     LNPN+ +YTSLIHGFC   +   
Sbjct: 397 ----PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LL+EM+++G  P+VV+   +++ L   G++  A  + + M    + P+A  YN L+ 
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G C    +   + L   M       D + Y  LI+G+ +N+ ++EA  ++  +  KGI P
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            VV YN +  G  +      A++    M+      D  TY T I G
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGG 618



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+    +       + L   + + GL P + TY  L++   + G +     +   + 
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PNV  + S+I  LC      +A  +  ++ A GC+P+ IT++TLI+GLC+ G   
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQ 416

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L +E T           PN  +Y+ +I G C  G V  A  L ++M      P+VV
Sbjct: 417 EAERLLRETTRWE------LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+ +LIHG   A   +EA  +  +M  + + P+    NV+++ LCK   +  A  L++ M
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++ +V P+ + Y TL+DGF     ++  +++F  ME  G   D   YN +I GYC+   +
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA+   + +   G  P   TY TL  G  +      AL L  +M       +   Y + 
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 374 IDGLC 378
           I+G C
Sbjct: 651 INGYC 655



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 164/349 (46%), Gaps = 23/349 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L         L + +++ +  L PD   Y++LI+  CK   +     +
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+   +T+LI G      + EA  +F  ++  G  P+V+ YN +I G C+
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+     M     ++G +  P+  TY+ +I G  K+G +  A  L   M     
Sbjct: 587 FGMMNEAVECMSTMR----KVGRI--PDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRC 640

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV Y+SLI+G+C   D + A+ L   M  QG+ PNV++  +++  L K  K+  A+ 
Sbjct: 641 QPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAM 700

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFC----------------LTGKINRVKELFVSMESMG 292
             + M+     PN +T ++L+ G C                L GK   + ++F ++ +  
Sbjct: 701 YFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGK-GALLDIFRALVNDR 759

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           C   + +YN +I   C +  + EAL L N++  KG KP   T+ +L +G
Sbjct: 760 CDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYG 808



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 171/420 (40%), Gaps = 56/420 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+ L+  L +         L +      L P+L +Y+ LI+ FC  G+V +   +
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVTF +LI GL    ++ EA  +  K+ A    P+   YN LI+GLC+
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A NL +EM   N        P+   Y+ +IDG  +   +D+A+++F  M+ + +
Sbjct: 517 KKMLPAARNLIEEMLEQN------VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGI 570

Query: 189 NPNVV-----------------------------------TYTSLIHGFCHANDWNEAKG 213
           +P+VV                                   TYT+LI G+    + + A  
Sbjct: 571 HPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M+ +  QPNVV+ + ++N  CK G  D A  L   M    + PN  TY  L+    
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLF 690

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV---------------EEALS 318
              K+ R    F  M    C  +D++ + L+ G C +                     L 
Sbjct: 691 KKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLD 750

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++  L      P    YN +   L        AL L  +M       D+ T+ + + G C
Sbjct: 751 IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFC 810



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 104/222 (46%)

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           +++ GLC EG V+K  +L          PN V Y  LI G+C   D      LL EM  +
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P VV+   +M+ L + G ++  + LL  M +  + PN   YN+++D  C     ++ 
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +   M + GC  D  +++ LI+G C+   V+EA  L  E     + P + +Y +L HG
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                +   A  L VEM       D  T+   I GL V  QV
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQV 485



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 21/279 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+    +N+  D    +F+ +   G+ PD+  Y+ +I  +C+ G ++        + 
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    P+  T+T+LI G   +  I  A +L   +    C+PNV+ Y++LING C+ G T 
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF  M +          PN +TY+I+I  L K+  V +A   F  M     +PN  
Sbjct: 662 AAECLFGSMESQG------LFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDY 715

Query: 194 TYTSLIHGFCHA----------NDWN-EAKGLLIE----MVDQGVQPNVVSSNVIMNELC 238
           T  SL+ G C++          +  N   KG L++    +V+    P   + N I+  LC
Sbjct: 716 TLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLC 775

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
            +  +  A  L + M     +P++ T+ +L+ GFC  GK
Sbjct: 776 IHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 9/216 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+G  AK  +    LSL   +      P++  YS LIN +CK+G       +
Sbjct: 607 PDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECL 666

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +      PNV+T+T LI  L  + ++V AA  F  +    C PN  T ++L+ GLC 
Sbjct: 667 FGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCN 726

Query: 129 TGHTIVALNLFKEMT-NGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKEL 179
           +  +I++ +    +  +G G +  +F+        P    Y+ II  LC    + +A +L
Sbjct: 727 SMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDL 786

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
             +M  +   P+  T+ SL++GFC      E + +L
Sbjct: 787 KNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 4/267 (1%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           ++ L+  L R G         ++M+       V   P       ++      G   KA E
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAV---PTRACLGALVATYADAGMEAKAAE 209

Query: 179 LFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +  + + +    P       L+        W++A+ L  EM+ +    +  S+ V++  L
Sbjct: 210 MCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGL 269

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C  G ++   +L++        PNA  YN L+DG+C  G + R   L   ME+ G     
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  L++   +  ++E+  SL +E+  + + P V  YN++   L + R A +AL +  +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
           M       D  T+ T I GLC   +V+
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQ 416


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 197/393 (50%), Gaps = 40/393 (10%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D+ L+LF ++   GLFP+  TYS+LI   C  G +     ++ ++  +   P+V    SL
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 88  IKG----------------------------------LCAESRIVEAAALFTKLKAFGCE 113
           ++G                                  LC   ++ EA +L   +   G  
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 501

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PNV++YN +I G CR G+  +A ++F +M      +    KPN VTYSI+IDG  K+G  
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDM------LARDLKPNVVTYSILIDGNFKKGDS 555

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +KA +LF QM   N+ P   T+ ++I+G C     +EA+  L   +++G  P+ ++ N I
Sbjct: 556 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 615

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++   K G +D+A  +   M +  V PN  TY +L++GFC + +I+   +    M   G 
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 675

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           + D  +Y+ LI+G+CK +++E A  L+ EL   G+ P  + YN++  G  ++   E AL 
Sbjct: 676 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 735

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            + +M  + +  D  TY T IDGL    ++ F 
Sbjct: 736 WYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 14/362 (3%)

Query: 19  GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFA 78
            CL K    +     F+     G+  D   YSI+I   CK    +LG  +   +    + 
Sbjct: 269 ACL-KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 327

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+  TFTS+I    A+  +VEA  L  ++   G   N++   +L+ G C  G+   ALNL
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F ++T    E G+   PN VTYS++I+G C  G ++KA EL+ QMK   + P+V    SL
Sbjct: 388 FNKIT----EDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           + G+  A  W EA  L  E VD GV  N+ + N++M+ LCK GKMD A  LLD MV   +
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN  +YN ++ G C  G ++    +F  M +   K +  +Y+ILI+G  K  + E+AL 
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA---LKLFVEMQGNDVAADTCTYRTFID 375
           L++++    I PT  T+NT+ +GL ++ Q   A   LK F+E           TY + +D
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE---EGFIPSCMTYNSIVD 617

Query: 376 GL 377
           G 
Sbjct: 618 GF 619



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 189/372 (50%), Gaps = 14/372 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N ++    +  + D   S+F  + +  L P++ TYSILI+   K G       +
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 561

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L    AP   TF ++I GLC   ++ EA          G  P+ +TYN++++G  +
Sbjct: 562 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 621

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL +++EM     E GV   PN VTY+ +I+G CK   +D A +   +M+ + L
Sbjct: 622 EGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 675

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA-- 246
             +V  Y++LI GFC   D   A+ L  E+++ G+ PN +  N +++       M+ A  
Sbjct: 676 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 735

Query: 247 --SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
              ++++  + CD+     TY TL+DG    G++    +L++ M S G   D  ++++L+
Sbjct: 736 WYKKMINDRIPCDLG----TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           NG C   ++E A  +  E+  K + P+V+ YNTL  G F     + A  L  EM    + 
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851

Query: 365 ADTCTYRTFIDG 376
            D  TY   I+G
Sbjct: 852 PDDVTYDILING 863



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 194/380 (51%), Gaps = 8/380 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+     P   +  ++++ C+A+    +  L L + + + G   +L   + L+  +C  G
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEA-LRLKEEMINCGKPMNLVVATSLMKGYCAQG 379

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +F +I      PN VT++ LI+G C    I +A+ L+T++K  G  P+V   N
Sbjct: 380 NLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVN 439

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +L+ G  +      A  LF E      + GV    N  TY+I++  LCK G +D+A  L 
Sbjct: 440 SLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M  + + PNVV+Y  +I G C   + + A  +  +M+ + ++PNVV+ +++++   K 
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G  + A  L D M+  ++ P  FT+NT+++G C  G+++  ++   +    G      +Y
Sbjct: 553 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTY 612

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +++G+ K   ++ AL++Y E+   G+ P VVTY +L +G  +  + + ALK   EM+ 
Sbjct: 613 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 672

Query: 361 NDVAADTCTYRTFIDGLCVR 380
             +  D   Y   IDG C R
Sbjct: 673 KGLELDVTAYSALIDGFCKR 692



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V + N LL    K   ++    LF      G+  +++TY+I+++  CK G++     
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACS 490

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++     PNVV++  +I G C +  +  A+++F+ + A   +PNV+TY+ LI+G  
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G +  AL+LF +M + N        P   T++ II+GLCK G + +A++       E 
Sbjct: 551 KKGDSEKALDLFDQMLSLN------IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+ +TY S++ GF    + + A  +  EM + GV PNVV+   ++N  CK+ ++D A 
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +  D M +  +  +   Y+ L+DGFC    +   ++LF  +  +G   +   YN +I+G+
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                +E AL  Y ++    I   + TY TL  GL +  +   A  L++EM    +  D 
Sbjct: 725 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 784

Query: 368 CTYRTFIDGLCVRPQVR 384
            T+   ++GLC + Q+ 
Sbjct: 785 ITFHVLVNGLCNKGQLE 801



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 9/344 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+    K    +  L LF ++ S+ + P  +T++ +IN  CK+GQ+S     
Sbjct: 537 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               L   F P+ +T+ S++ G   E  I  A A++ ++  FG  PNV+TY +LING C+
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +    +AL    EM     E+ V        YS +IDG CK   ++ A++LF ++    L
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVT------AYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN + Y S+I GF   N+   A     +M++  +  ++ +   +++ L K G++  AS 
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+   + P+  T++ L++G C  G++   +++   M+          YN LI GY 
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 830

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           +   ++EA +L++E+  +G+ P  VTY+ L +G F   + +R+L
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKF---KGDRSL 871



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 158/398 (39%), Gaps = 29/398 (7%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKM-- 59
            +H    P+S  +++   L       + L  FKR  +  G    +  Y +L++   +   
Sbjct: 90  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 149

Query: 60  --------------GQVSLGFVIFGRILRSC-----FAPNVVTFTSLIKGLCAESRIVEA 100
                         G      V+F   L +C     F  +   F  L+      +RI  A
Sbjct: 150 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 209

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              F  +      P V   N L+  L R        +L+ +M    G  G  F     T 
Sbjct: 210 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV-LRGIYGDHF-----TV 263

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            +++    KEG V++A+E F + K   +  +   Y+ +I   C   + N    LL EM +
Sbjct: 264 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE 323

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  P+  +   ++      G M  A RL + M+ C    N     +LM G+C  G ++ 
Sbjct: 324 RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 383

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              LF  +   G   +  +Y++LI G C +  +E+A  LY ++   GI P+V   N+L  
Sbjct: 384 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 443

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  +    E A KLF E     V A+  TY   +  LC
Sbjct: 444 GYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLC 480



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++  L+  L K         L+  + S G+ PD+ T+ +L+N  C  GQ+     
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 805

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           I   + R    P+V+ + +LI G   E  + EA  L  ++   G  P+ +TY+ LING
Sbjct: 806 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 84  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRI 143

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 203

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN+VT++ +IDG CK G VD A E++ QM 
Sbjct: 204 GLCKESKIDDANELFDEMLVK----GLV--PNSVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK+G +D
Sbjct: 258 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 317

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q + R +   Y  L+ G C  G     +++   M S+G K D  +Y ++I
Sbjct: 318 TAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMII 377

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 378 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 102 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVV 161

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 162 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKIDDAN 215

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 216 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 276 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 335

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 336 VVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 395

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 396 MQRDGHVPSVVTYNVLMNG 414



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  K+D+A+ L D M+   + PN+ T+ TL+DG C  G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   +   D   Y   I GLC
Sbjct: 308 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC 346



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DLY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 54  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG------LRPSVVSYNTLM 167

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 168 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV 227

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 228 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 287

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK+ +++ A      +  +  +   V Y  L  GL  
Sbjct: 288 IDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCR 347

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              +  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 348 EGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 386



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 131 LMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 190

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   KI+   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 191 VQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAM 250

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGC 310

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 311 CKDGDLDTAFEHRK 324



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLIT 63

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 64  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 123

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 124 SLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 183

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 184 SAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKN 243

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 282


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 191/375 (50%), Gaps = 13/375 (3%)

Query: 9   PPVSSFNILLGCLAKNKHY--DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + + N +L  L+++        L +F+ L  + L P+ YT+++L++  C  G ++   
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                +     +P+ VT+ +L+   C +  + EA AL  ++K  G  P   TYNTL++  
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A  + + MT         F+P+  TY+++  GLC+ G VD+A  L  +M  E
Sbjct: 289 ARLGWIKQATKVVESMT------AYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM--E 340

Query: 187 NLN---PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
            L    P+VVTY +L+         ++A  LL EM D+GV+P +V+ N+++  LCK GK+
Sbjct: 341 RLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           + A   L+ + +  + P+  TYNTL+D +C  G + +   L   M   G K D F+ N +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           +   CK K  E+A  L +  P +G  P  V+Y T+    F+    E AL+L+ +M    +
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 364 AADTCTYRTFIDGLC 378
                TY T I GLC
Sbjct: 521 IPSISTYNTLIKGLC 535



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 183/408 (44%), Gaps = 65/408 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P   ++N L+   A+         + + + + G  PDL TY++L    C+ G+V   F  
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRL 335

Query: 67  --------------VIFGRILRSCFA--------------------PNVVTFTSLIKGLC 92
                         V +  ++ +CF                     P +VT   ++K LC
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E ++ EA     K+   G  P+VITYNTLI+  C+ G+   A  L  EM     ++   
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 153 -----------------------------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
                                        F P+ V+Y  ++    KE   + A  L+ QM
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
               L P++ TY +LI G C      EA   L E V++G+ P+  + N+I++  CK G +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +NA R  + MV+   +P+  T NTLM+G CL GK+++  +LF S    G K D  +YN L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           I   CK  +V+ AL  ++++  KG++P   TYN +   L E  ++E A
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 197/409 (48%), Gaps = 48/409 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N LL    +        +L  R+   G+ P   TY+ L++ F ++G +     +
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE-PNVITYNTLINGLC 127
              +    F P++ T+  L  GLC   ++ EA  L  +++  G   P+V+TYNTL++   
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   +  AL L +EM +     GV  KP  VT++I++  LCKEG +++A     ++  E 
Sbjct: 361 KWRCSSDALRLLEEMRDK----GV--KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG 414

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V+TY +LI  +C A +  +A  L+ EMV +G++ +  + N ++  LCK  + ++A 
Sbjct: 415 LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAE 474

Query: 248 -----------------------------------RLLDLMVQCDVRPNAFTYNTLMDGF 272
                                              RL D M++  + P+  TYNTL+ G 
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGL 534

Query: 273 CLTGKINRVKELFVSMESM---GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           C   ++ R+KE    +      G   D+ +YNI+I+ YCK  ++E A   +N++     K
Sbjct: 535 C---RMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P VVT NTL +GL    + ++ALKLF          D  TY T I  +C
Sbjct: 592 PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 43/416 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + NI++  L K    +  L   +++   GL PD+ TY+ LI+ +CK G V+  F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      +  T  +++  LC   R  +A  L       G  P+ ++Y T++    +
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   AL L+ +M      I     P+  TY+ +I GLC+   + +A +   +   + L
Sbjct: 502 EYNPEPALRLWDQM------IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGL 555

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY  +IH +C   D   A     +MV+   +P+VV+ N +MN LC +GK+D A +
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +  V+   + +  TYNTL+   C  G ++     F  ME  G + D F+YN++++   
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675

Query: 309 KNKEVEEALSLYNELPFKG----------IKPTVV------------------------- 333
           +    EEA ++ ++L   G          +KP+                           
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 334 -TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            TY    +GL    Q + A  +  EM    +  D  TY T ++GL  R Q R T+A
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKR-QKRQTHA 790



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 10/283 (3%)

Query: 100 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTI--VALNLFKEMTNGNGEIGVVFKPN 156
           AA L   L+   G  P++   N +++ L R+  T+   +L++F+ +      I +   PN
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL------IELRLHPN 207

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T+++++   C +G +  A      M+   L+P+ VTY +L++  C      EA+ LL 
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M   G+ P   + N +++   + G +  A+++++ M      P+  TYN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 277 KINRVKELFVSMESMGCKHDD-FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           K++    L   ME +G    D  +YN L++   K +   +AL L  E+  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N +   L +  + E AL    ++    +A D  TY T ID  C
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL    + K  D V  + K + + G+ P + TY+IL++       ++    +F  + 
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               + +V  ++S+I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  +M      +G+    N + ++ +IDG C++  VDKA E+ + M+   +  +V 
Sbjct: 301 AAEMLVTDMQVRG--VGI----NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L  G   AN  +EAK LL  M+++GV+PN VS   +++  C  G M  A RL   M
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+  TYN +MDG+   G I   +     ME  G   D +SY  L++G+C N +V
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + AL L+ E+  +G KP +V Y  L  GL +  ++E A +L+  M G+ +  D   Y   
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 374 IDGL 377
           +  L
Sbjct: 535 VGSL 538



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 179/382 (46%), Gaps = 22/382 (5%)

Query: 26  HYDTVLSLFKRLNSIGLFPDLYT---YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           H DT   L K+  +    PD  T    S++++ +CK G+V+    +   + R     N +
Sbjct: 122 HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            + SL+     E      A +   ++  G EP V TY  L++GL           +F+EM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + N    V F      YS +I+  C+ G V +A E+F +     + PN  TY +LI+GF
Sbjct: 240 KSKNLSGDVYF------YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 293

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C       A+ L+ +M  +GV  N +  N +++  C+   +D A  +  +M +  +  + 
Sbjct: 294 CKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 353

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
           +TYNTL  G     +++  K L   M   G + +  SY  LI+ +C   ++ EA  L+ E
Sbjct: 354 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413

Query: 323 LPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +   G +P++VTYN +  G  +   IR+AER  K   EM+   +  D  +Y   + G CV
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKK---EMEKKGLVPDIYSYAALVHGHCV 470

Query: 380 RPQVR-----FTYARRKGNSGN 396
             +V      F   +++G+  N
Sbjct: 471 NGKVDVALRLFEEMKQRGSKPN 492



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTS---LIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           G +     +  +   SC  P+ VT  S   ++ G C   R+  A  L  ++   G + N 
Sbjct: 121 GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN+L++   R         + K M N         +P   TY+I++DGL     + K 
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEG------IEPTVGTYTILVDGLSAARDITKV 232

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +F +MK +NL+ +V  Y+S+I+ +C A +   A  +  E V  G++PN  +   ++N 
Sbjct: 233 EAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 292

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+M+ A  L+  M    V  N   +NT++DG+C    +++  E+ + ME MG + D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN L  G  +   ++EA +L   +  KG++P  V+Y TL            A +LF 
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFR 412

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           EM GN       TY   +DG   +  +R
Sbjct: 413 EMAGNGAEPSLVTYNVMMDGYIKKGSIR 440



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 29/333 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L+  +    V ++F+ + S  L  D+Y YS +IN +C+ G V     +
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   + +   PN  T+ +LI G C   ++  A  L T ++  G   N I +NT+I+G CR
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
                 AL +   M     E+ V                               +PN V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I   C EG + +A+ LF +M      P++VTY  ++ G+       EA+    EM 
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P++ S   +++  C NGK+D A RL + M Q   +PN   Y  L+ G    G+  
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
              +L+ +M   G   DD  Y+ L+     +K+
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    +    D  L +   +  +G+  D+YTY+ L     +  ++     +   ++
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN V++T+LI   C E  +VEA  LF ++   G EP+++TYN +++G  + G   
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A    KEM       G+V  P+  +Y+ ++ G C  G VD A  LF +MK     PN+V
Sbjct: 441 EAERFKKEMEKK----GLV--PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV 494

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            YT+LI G        EA  L   M+  G+ P+    + ++  L  + K +   R
Sbjct: 495 AYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 11/366 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDL--YTYSILINCFCKMGQVSLGFVIFGRI 72
           N LL  L K + +     +F R   +G   D    TY+ LI  FCK G +   F +   +
Sbjct: 73  NCLLRTLVKARRHHQAYQIF-RDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                +P+VVT +S+++ LC    +  A   F +  +  C P+ + +N L++GLC+    
Sbjct: 132 KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQL 189

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  + +EM+    E G+V  P+ VTY+ +IDGLCK   +++A++L   M    + PN+
Sbjct: 190 SEARQMIEEMS----ERGIV--PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LI+G+C       A  L+  M+  G  P+VV+ N +++  C+  K+D A  +L L
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL 303

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    PN  TYN L+ G C  G+ N   EL   M+  G   D  +YN LI  +C+N +
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  + N +  +G+ P  ++Y TL   L +  + + A  L   M       +  T+ +
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 373 FIDGLC 378
            ++GLC
Sbjct: 424 LMEGLC 429



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 187/402 (46%), Gaps = 43/402 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + + ++  L    +    +  F+   S+   PD   ++IL++  CK  Q+S    +
Sbjct: 138 PDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQLSEARQM 195

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+ SLI GLC   R+ EA  L   +      PN++TYNTLI G C+
Sbjct: 196 IEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCK 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG T +A  L + M            P+ VT++ +I G C++  +DKA E+   MK    
Sbjct: 256 TGCTGLAHQLIERMIQSGTH------PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-------- 240
            PN+VTY  LI G C A   NEA  LL EM  +G+ P++++ N ++   C+N        
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ 369

Query: 241 ---------------------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                       + D A  LLD M      PN FT+N+LM+G C
Sbjct: 370 IQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLC 429

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            + +++  + L   M  +GC     +Y +L+ G CK   V++A  +   +  +GI+P V 
Sbjct: 430 CSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVS 489

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +  T+ H L    + + AL  F ++   +  A   +Y+  ++
Sbjct: 490 SSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 180/368 (48%), Gaps = 12/368 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+G   K    +    L   +   G  PD+ T+S ++   C  G +S     F   
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    AP+ V F  L+ GLC  +++ EA  +  ++   G  P+V+TYN+LI+GLC++   
Sbjct: 167 VEC--APDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L + M           +PN VTY+ +I G CK G    A +L  +M     +P+V
Sbjct: 225 EEARQLLETMVKRK------VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+ SLI GFC  +  ++A  +L  M      PN+V+ NV+++ LC  G+ + A  LL  
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+  TYN+L+  FC   +I +  ++   M   G   D  SY  L     K++ 
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ--GNDVAADTCTY 370
            +EA +L + +   G  P + T+N+L  GL   R+ + A  L   M+  G D AA   TY
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAAS--TY 456

Query: 371 RTFIDGLC 378
              + GLC
Sbjct: 457 EVLVTGLC 464



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 9/309 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           N  T   L++ L    R  +A  +F  +L    C+ N ITYNTLI G C+ G    A  L
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             EM            P+ VT+S I+  LC  G + +A + F +       P+ V +  L
Sbjct: 128 LAEMKERG------HSPDVVTHSSIVQALCNTGNLSRAMQYFRESV--ECAPDSVLFNIL 179

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +HG C AN  +EA+ ++ EM ++G+ P+VV+ N +++ LCK+ +M+ A +LL+ MV+  V
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           RPN  TYNTL+ G+C TG      +L   M   G   D  ++N LI+G+C+  ++++A  
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + +      P +VTYN L  GL +  +A  A +L  EM G  +  D  TY + I   C
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359

Query: 379 VRPQVRFTY 387
              Q+   +
Sbjct: 360 RNFQIEQAF 368



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 173/341 (50%), Gaps = 6/341 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K+   +    L + +    + P+L TY+ LI  +CK G   L   +
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+++S   P+VVTF SLI G C +S+I +A  +   +K   C PN++TYN LI+GLC 
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM +G G +     P+ +TY+ +I   C+   +++A ++   M    +
Sbjct: 326 AGRANEACELLSEM-DGRGIL-----PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ ++Y +L      +  ++EA  LL  M D G  PN+ + N +M  LC + ++D A  
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL +M +    P A TY  L+ G C  G+++  KE+ V M S G +    S   +++   
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           +  + + AL  ++++     K    +Y  L   +  +R+ +
Sbjct: 500 REGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVLREGK 540


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 172/335 (51%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ +I+ FCK  +V     +  R+ +  F P+VVT+  LI   C   R+  A  +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L    C+P VITY  LI      G    A+ L  EM +         +P+  TY+++
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG------LRPDRYTYNVV 257

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ++G+CKEG +D+A E   ++        V TY  L+    +   W   + L+ +M+ +G 
Sbjct: 258 VNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC 317

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN ++ + ++  LC++GK+D A  +L +M +  + P+ ++Y+ L+   C  GK++   E
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               M S G   D  SYN ++   CKN   +EAL+++ +L   G  P   +YNTLF  L+
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL + +EM  N +  D  TY + I  LC
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLC 472



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 30/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K    D    +  R+   G  PD+ TY+ILI  FC  G++ L   +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L+    P V+T+T LI+    +  I EA  L  ++ + G  P+  TYN ++NG+C+
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 129 TGHTIVALN-------------------LFKEMTN-GNGEIGVVF---------KPNTVT 159
            G    A                     L +++ N G  E G            +PN +T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           YS +I  LC++G +D+AK +   MK + L P+  +Y  LI   C     + A   L +M+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  P+++S N I+  LCKNG  D A  + + + +    PNA +YNTL      +G   
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPTVVTYNTL 338
           R   + + M S G   D+ +YN LI+  C++  V++A+ L  ++   +  +PTV++YNT+
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             GL ++++   A+++   M       +  TY   I G+
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 10/254 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            P P++ ++ L+  L ++   D   ++ K +    L PD Y+Y  LI+  C+ G+V L  
Sbjct: 318 EPNPIT-YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                ++     P+++++ S++  LC      EA  +F KL   GC PN  +YNTL   L
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 127 CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-K 184
             +G  I AL +  EM +NG         P+ +TY+ +I  LC++G VD+A EL + M +
Sbjct: 437 WSSGDKIRALGMILEMLSNG-------IDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            E   P V++Y +++ G C      +A  +L  MV++G  PN  +  +++  +   G   
Sbjct: 490 SEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRY 549

Query: 245 NASRLLDLMVQCDV 258
           +A  L +L+V  D 
Sbjct: 550 DAMELANLLVNMDA 563



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 7/292 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  ++  E+      +   G +P+VI    LI G         A+ +  E+   +G    
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHG---- 142

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             KP+   Y+ +I G CK   VD A ++  +MK     P+VVTY  LI  FC     + A
Sbjct: 143 --KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             ++ +++    +P V++  +++      G +D A +LLD M+   +RP+ +TYN +++G
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G ++R  E    +   GC     +YNIL+       + E    L +++  KG +P 
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +TY+TL   L    + + A  +   M+   +A D  +Y   I  LC   +V
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 7/267 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VS++NILL  L     ++    L   +   G  P+  TYS LI   C+ G++     +  
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLK 345

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +     AP+  ++  LI  LC E ++  A      + + G  P++++YN+++  LC+ G
Sbjct: 346 VMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG 405

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   ALN+F+++    GE+G    PN  +Y+ +   L   G   +A  + L+M    ++P
Sbjct: 406 NADEALNIFEKL----GEVGC--PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           + +TY SLI   C     ++A  LL++M + +  QP V+S N ++  LCK  ++ +A  +
Sbjct: 460 DEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEV 519

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           L  MV     PN  TY  L+ G    G
Sbjct: 520 LAAMVNEGCLPNETTYTLLIQGIGFAG 546



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 282 KELFVSMESMGCKHD------DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           ++ F   E+   KHD      D ++   +N  CK+ + +E+L     +  +G KP V+  
Sbjct: 56  QQQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILC 115

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             L  G F +++ E+A+++ +E+       D   Y   I G C   +V
Sbjct: 116 TKLIKGFFNMKKIEKAIQV-MEILEKHGKPDVFAYNAVISGFCKADRV 162


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 200/410 (48%), Gaps = 41/410 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F+ L+    K +  +TV SL + + S+GL P++YTY+I I    + G++     I
Sbjct: 227 PSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRI 286

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+VVT+T LI  LC   ++ +A  LF K+KA   +P+ +TY T+++    
Sbjct: 287 MKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSD 346

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        + EM   +G     + P+ +T++I+++ LCK G +D+A  L   M+ + +
Sbjct: 347 CGDLGRVKEFWSEM-EADG-----YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGV 400

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLL---------------IEMVD------------- 220
            PN+ TY +LI G    N  ++A  L                I  +D             
Sbjct: 401 LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALE 460

Query: 221 -------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                  +G+ PN+V+ N  +  L + G++  A  + + +    + P++ TYN +M  + 
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++   EL   M    C+ D    N LIN   K   V+EA  ++  L    + PTVV
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           TYNTL  GL +  Q +RA++LF  M GN    +T T+ T +D LC   +V
Sbjct: 581 TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 174/338 (51%), Gaps = 8/338 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F ++   G   + Y+Y+ LI+   + G       ++ R++     P++ TF++L+     
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIGVV 152
                   +L  ++++ G +PN+ TY   I  L R G    A  + K M + G G     
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCG----- 296

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+ VTY+++ID LC  G +D A ELF++MK  +  P+ VTY +++  F    D    K
Sbjct: 297 --PDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVK 354

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
               EM   G  P+V++  +++N LCK G +D A  LLD+M +  V PN  TYNTL+ G 
Sbjct: 355 EFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
               +++   +LF +ME++G     ++Y + I+ Y K+   ++AL  + ++  +GI P +
Sbjct: 415 LRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI 474

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           V  N   + L E+ +   A  +F  ++ N +A D+ TY
Sbjct: 475 VACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 41/386 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L      D  + LF ++ +    PD  TY  +++ F   G +      
Sbjct: 297 PDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEF 356

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +    +AP+V+TFT L+  LC    I EA  L   ++  G  PN+ TYNTLI+GL R
Sbjct: 357 WSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL+LF  M      +GVV  P   TY + ID   K G  DKA E F +MK   +
Sbjct: 417 VNRLDDALDLFNNMET----LGVV--PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 189 NPNVV-----------------------------------TYTSLIHGFCHANDWNEAKG 213
            PN+V                                   TY  ++  +  A   +EA  
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           LL +M +   +P+++  N ++N L K G++D A ++   +    + P   TYNTL+ G  
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G++ R  ELF SM   GC  +  ++N +++  CKN EV+ AL +  ++      P V+
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVL 650

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQ 359
           T+NT+ HGL   ++   A+ LF +M+
Sbjct: 651 TFNTIIHGLVIEKRVSDAIWLFHQMK 676



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 52   LINCFCKMGQVSLGFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            +I   CK  Q  +   +F R  +     P + ++  LI+G         A  LFT++K  
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 111  GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
            GC P+V TYN L++   ++G       L+++M      I    KPNT+T++III  L K 
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQM------ICSSCKPNTITHNIIIANLVKS 873

Query: 171  GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              +DKA +LF  +   + +P   TY  L+ G   +    EAK L  EMVD G +PN    
Sbjct: 874  NSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY 933

Query: 231  NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            N+++N   K G ++ A  L   MV+  +RP+  +Y +L+   C  G+++     F  ++ 
Sbjct: 934  NILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQ 993

Query: 291  MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
             G   D  +YN++I+G  ++  +EEAL+LY+E+  +GI P + TYN+L   L      E+
Sbjct: 994  TGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ 1053

Query: 351  ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
            A KL+ E+Q   +  +  TY   I G  +       YA  K
Sbjct: 1054 AGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYK 1094



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 7/355 (1%)

Query: 17   LLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
            ++  L K+K      S+F R    +G+ P L +Y+ LI  F  +    + + +F  +  +
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 76   CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              AP+V T+  L+       +I E   L+ ++    C+PN IT+N +I  L ++     A
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879

Query: 136  LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            L+LF ++ +G+      F P   TY  ++DGL K G +++AKELF +M      PN   Y
Sbjct: 880  LDLFYDLVSGD------FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY 933

Query: 196  TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
              LI+GF    D N A  L   MV +G++P++ S   ++  LC+ G++D+A    + + Q
Sbjct: 934  NILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQ 993

Query: 256  CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
              +  ++  YN ++DG   + +I     L+  M+S G   D F+YN LI        VE+
Sbjct: 994  TGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ 1053

Query: 316  ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            A  LY EL F G++P V TYN L  G      ++ A  ++  M     + +T T+
Sbjct: 1054 AGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 184/406 (45%), Gaps = 42/406 (10%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP   +FN +L CL KN   D  L +  ++ ++   PD+ T++ +I+      +VS    
Sbjct: 611  PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIW 670

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK--------------------- 106
            +F + ++    P+ VT  +L+ G+     + +A  +                        
Sbjct: 671  LFHQ-MKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI 729

Query: 107  LKAFGCEPNVITYNTLING---------------LCRTGHTIVALNLFKEMTNGNGEIGV 151
            L   G E  ++  + L+ G               LC+    +VA ++F   T    E+GV
Sbjct: 730  LTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK---ELGV 786

Query: 152  VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              KP   +Y+ +I+G       + A  LF +MK     P+V TY  L+     +   NE 
Sbjct: 787  --KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 212  KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
              L  +M+    +PN ++ N+I+  L K+  +D A  L   +V  D  P   TY  L+DG
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 272  FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               +G++   KELF  M   GC+ ++  YNILING+ K  +V  A  L+  +  +GI+P 
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 332  VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + +Y +L   L E  + + AL  F +++   +  D+  Y   IDGL
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 6/309 (1%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           V+F  +       ++ T+  + KGL     + +    F K++  G   N  +YN LI+ L
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLL 204

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            ++G    AL +++ M           KP+  T+S ++    K    +  K L  +M+  
Sbjct: 205 LQSGLCREALEMYRRMVLEG------LKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TYT  I     A   +EA  ++  M D G  P+VV+  V+++ LC  GK+D+A
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M     +P+  TY T++D F   G + RVKE +  ME+ G   D  ++ IL+N 
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   ++EA  L + +  +G+ P + TYNTL  GL  + + + AL LF  M+   V   
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 367 TCTYRTFID 375
             TY  FID
Sbjct: 439 AYTYILFID 447



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 172/330 (52%), Gaps = 6/330 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + S+N L+       + +   +LF  + + G  PD++TY++L++   K G+++  F +
Sbjct: 788  PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            + +++ S   PN +T   +I  L   + + +A  LF  L +    P   TY  L++GL +
Sbjct: 848  YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +G    A  LF+EM +         +PN   Y+I+I+G  K G V+ A ELF +M  E +
Sbjct: 908  SGRLEEAKELFEEMVDYG------CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P++ +YTSL+   C A   ++A     ++   G+  + ++ N++++ L ++ +++ A  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L D M    + P+ FTYN+L+    + G + +  +L+  ++ +G + + F+YN LI GY 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +   + A ++Y  +   G  P   T+  L
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 166/385 (43%), Gaps = 37/385 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N L+  L K    D    +F RL  + L P + TY+ LI    K GQV     +
Sbjct: 542 PDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMEL 601

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   PN +TF +++  LC    +  A  +  K+    C P+V+T+NT+I+GL  
Sbjct: 602 FASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVI 661

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ LF +M         +  P+ VT   ++ G+ K G ++ A ++         
Sbjct: 662 EKRVSDAIWLFHQMKK-------MLTPDCVTLCTLLPGVVKNGLMEDAFKI--------- 705

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV-SSNVIMNELCKNGK----- 242
                 +   +  +     W +  G +  +   G +  ++    ++   +CK+G      
Sbjct: 706 ---AEDFVHRLGVYVDRRFWEDLMGGI--LTQAGTEKTILFGDRLVCGRVCKDGSVLMPI 760

Query: 243 ----------MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
                     +   S  +    +  V+P   +YN L++GF           LF  M++ G
Sbjct: 761 IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           C  D F+YN+L++ + K+ ++ E   LY ++     KP  +T+N +   L +    ++AL
Sbjct: 821 CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGL 377
            LF ++   D +   CTY   +DGL
Sbjct: 881 DLFYDLVSGDFSPTPCTYGPLLDGL 905



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 6/297 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N+LL    K+   + +  L++++      P+  T++I+I    K   +     +
Sbjct: 823  PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  ++   F+P   T+  L+ GL    R+ EA  LF ++  +GC PN   YN LING  +
Sbjct: 883  FYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK 942

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            TG    A  LFK M           +P+  +Y+ ++  LC+ G VD A   F ++K   L
Sbjct: 943  TGDVNTACELFKRMVREG------IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              + + Y  +I G   ++   EA  L  EM  +G+ P++ + N ++  L   G ++ A +
Sbjct: 997  YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGK 1056

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            L + +    + PN FTYN L+ G+ ++G  +    ++  M   GC  +  ++  L N
Sbjct: 1057 LYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 9/251 (3%)

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G  +V  NL +           + K +  TY II  GL   G + +    F +M+   
Sbjct: 139 RVGDMVVVFNLMQNQ---------IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + N  +Y  LIH    +    EA  +   MV +G++P++ + + +M    K    +   
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M    ++PN +TY   +      G+I+    +   ME  GC  D  +Y +LI+  
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   ++++A+ L+ ++     KP  VTY T+     +     R  + + EM+ +  A D 
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 368 CTYRTFIDGLC 378
            T+   ++ LC
Sbjct: 370 ITFTILVNALC 380


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL    + K  D V  + K + + G+ P + TY+IL++       ++    +F  + 
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               + +V  ++S+I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 224

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  +M      +G+    N + ++ +IDG C++  VDKA E+ + M+   +  +V 
Sbjct: 225 AAEMLVTDMQVRG--VGI----NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 278

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L  G   AN  +EAK LL  M+++GV+PN VS   +++  C  G M  A RL   M
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+  TYN +MDG+   G I   +     ME  G   D +SY  L++G+C N +V
Sbjct: 339 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 398

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + AL L+ E+  +G KP +V Y  L  GL +  ++E A +L+  M G+ +  D   Y   
Sbjct: 399 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 458

Query: 374 IDGL 377
           +  L
Sbjct: 459 VGSL 462



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 169/391 (43%), Gaps = 46/391 (11%)

Query: 26  HYDTVLSLFKRLNSIGLFPDLYT---YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           H DT   L K+  +    PD  T    S++++ +CK G+V+    +   + R     N +
Sbjct: 46  HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 103

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            + SL+     E      A +   ++  G EP V TY  L++GL           +F+EM
Sbjct: 104 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 163

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + N    V F      YS +I+  C+ G V +A E+F +     + PN  TY +LI+GF
Sbjct: 164 KSKNLSGDVYF------YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 217

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN---------------------- 240
           C       A+ L+ +M  +GV  N +  N +++  C+                       
Sbjct: 218 CKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 277

Query: 241 -------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                         +MD A  LL +M++  VRPN  +Y TL+   C  G +   + LF  
Sbjct: 278 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 337

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G +    +YN++++GY K   + EA    NE+  KG+ P + +Y  L HG     +
Sbjct: 338 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 397

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + AL+LF EM+      +   Y   I GL 
Sbjct: 398 VDVALRLFEEMKQRGSKPNLVAYTALISGLA 428



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTS---LIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           G +     +  +   SC  P+ VT  S   ++ G C   R+  A  L  ++   G + N 
Sbjct: 45  GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN+L++   R         + K M N         +P   TY+I++DGL     + K 
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEG------IEPTVGTYTILVDGLSAARDITKV 156

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +F +MK +NL+ +V  Y+S+I+ +C A +   A  +  E V  G++PN  +   ++N 
Sbjct: 157 EAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 216

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+M+ A  L+  M    V  N   +NT++DG+C    +++  E+ + ME MG + D
Sbjct: 217 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 276

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN L  G  +   ++EA +L   +  KG++P  V+Y TL            A +LF 
Sbjct: 277 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFR 336

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           EM GN       TY   +DG   +  +R
Sbjct: 337 EMAGNGAEPSLVTYNVMMDGYIKKGSIR 364



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 29/333 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L+  +    V ++F+ + S  L  D+Y YS +IN +C+ G V     +
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   + +   PN  T+ +LI G C   ++  A  L T ++  G   N I +NT+I+G CR
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
                 AL +   M     E+ V                               +PN V+
Sbjct: 255 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 314

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I   C EG + +A+ LF +M      P++VTY  ++ G+       EA+    EM 
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P++ S   +++  C NGK+D A RL + M Q   +PN   Y  L+ G    G+  
Sbjct: 375 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 434

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
              +L+ +M   G   DD  Y+ L+     +K+
Sbjct: 435 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 467



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    +    D  L +   +  +G+  D+YTY+ L     +  ++     +   ++
Sbjct: 245 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN V++T+LI   C E  +VEA  LF ++   G EP+++TYN +++G  + G   
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A     EM     + G+V  P+  +Y+ ++ G C  G VD A  LF +MK     PN+V
Sbjct: 365 EAERFKNEME----KKGLV--PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV 418

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            YT+LI G        EA  L   M+  G+ P+    + ++  L  + K +   R
Sbjct: 419 AYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 473


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 192/405 (47%), Gaps = 29/405 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    KN + D    +F R+   G  P+  TYS LIN  C  G++     +
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P V  +T  I  LC   R  EA  L  K+K  GC PNV TY  LI+GL R
Sbjct: 295 LEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSR 354

Query: 129 TGHTIVALNLFKEM--------------------TNGNGEIGV-VFK--------PNTVT 159
            G   VA+ ++ +M                      G  E  + +F+        PNT T
Sbjct: 355 DGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTET 414

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++II G C  G++ KA  +F QM     +PNV+TY  +IH +      N A  LL  M 
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G++ +  +   +++   + GK+++A  L + MV+  + PN  TYN +++G+    K++
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF  M   G      +YN++I+G+ K   + EA +   ++  +G+ P V+TY +  
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            GL +  +   A K+F EM+  D   + CTY + IDGLC   Q  
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 181/376 (48%), Gaps = 42/376 (11%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           LNS G+ P+L+T++ +I   C  G+V    +I G I      P+  T+TSLI G C    
Sbjct: 194 LNS-GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           +  A  +F ++   GC+PN +TY+ LINGLC  G    A+++ +EM +   E      P 
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIE------PT 306

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
              Y+I I  LC  G   +A +L  +MK     PNV TYT+LI G      +  A G+  
Sbjct: 307 VHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYH 366

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+  G+ P  V+ + ++N+L   G+ + A  + + M+  D  PN  TYN ++ GFC  G
Sbjct: 367 KMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIG 426

Query: 277 KINRVKELFVSM--------------------------------ESM---GCKHDDFSYN 301
            I +   +F  M                                E M   G K D ++Y 
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI+G+ +  ++E A SL+NE+   GI P VVTYN + +G   + + + AL LF +M  +
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546

Query: 362 DVAADTCTYRTFIDGL 377
                + TY   I G 
Sbjct: 547 GNVPSSGTYNMMISGF 562



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 183/402 (45%), Gaps = 39/402 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  L+++  ++  + ++ ++ + GL P   TYS LIN     G+      I
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     PN  T+  +IKG C+   I +A A+F ++   G  PNVITYN +I+   +
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFK 459

Query: 129 TGHTIVALNLFKEMTNGNG--------------------------------EIGVVFKPN 156
            G+   A+ L  EM  GNG                                E G+   PN
Sbjct: 460 QGYMNNAMRLL-EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI--SPN 516

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+ II+G      VD A  LF +M      P+  TY  +I GF   N  +EA+    
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG 576

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +MV QG+ PNV++    ++ LCKNG+   A ++   M + D  PN  TY++L+DG C  G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           +    + L       GC+ +  +Y  L+ G C      EA  L   +  KG++P+   Y 
Sbjct: 637 QAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L  G  +  + E ALK+F  M           Y+  I  LC
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 172/332 (51%), Gaps = 6/332 (1%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           LY++S L+    K     LG  ++  +L S   PN+ TF ++IK LC + ++ EA  +  
Sbjct: 167 LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMG 226

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
            +  +G  P+  TY +LI G C+ G+  +A  +F  M     +      PN+VTYS +I+
Sbjct: 227 HIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCD------PNSVTYSALIN 280

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLC EG +++A ++  +M  + + P V  YT  I   C A    EA  LL +M  +G  P
Sbjct: 281 GLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGP 340

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           NV +   +++ L ++GK + A  +   M+   + P A TY+ L++   + G+      +F
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF 400

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M S     +  +YN++I G+C    +++A ++++++   G  P V+TYN + H  F+ 
Sbjct: 401 EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                A++L   M+GN +  DT TY   I G 
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 177/357 (49%), Gaps = 11/357 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PSP  V ++NI++    K  + +  + L + +   GL  D +TY+ LI+ F + G++   
Sbjct: 443 PSPN-VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHA 501

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +F  ++    +PNVVT+ ++I G    +++ +A ALF K+   G  P+  TYN +I+G
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISG 561

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             +T     A N   +M            PN +TY+  IDGLCK G    A ++F +MK 
Sbjct: 562 FSKTNRISEAENFCGKMVKQG------LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            +  PN+ TY+SLI G C      +A+ LL    D G +PNV +   ++  LC  G+   
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +L++ M +  ++P+   Y  L+ G C   ++    ++F SM + G +     Y  LI 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
             CK    ++A  ++  +  K      V +  L  GL +  + + +L+L   M+  +
Sbjct: 732 ALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 10/289 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N ++         D  L+LF ++   G  P   TY+++I+ F K  ++S 
Sbjct: 511 HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISE 570

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
                G++++    PNV+T+TS I GLC   R   A  +F ++K     PN+ TY++LI+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLID 630

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G    A  L  +            +PN  TY+ ++ GLC +G   +A +L   MK
Sbjct: 631 GLCQEGQAEDAERLLDDGC----------EPNVDTYTTLVRGLCGKGRCYEADQLVESMK 680

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+   Y +L+ G C   +   A  +   MV  G QP +     ++  LCK     
Sbjct: 681 KKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQ 740

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
            A  +   M++     +   +  L+DG    G+ +   EL   MES  C
Sbjct: 741 KAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNC 789



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 8/283 (2%)

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           R+++  +       FG    + +++TL+  L +     +  +++ EM N         +P
Sbjct: 149 RVIQVLSEINTTYDFGY--TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSG------IRP 200

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N  T++ +I  LC +G V +A+ +   + +    P+  TYTSLI G C   + + A  + 
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             MV  G  PN V+ + ++N LC  G+++ A  +L+ M+   + P    Y   +   C  
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+     +L   M+  GC  +  +Y  LI+G  ++ + E A+ +Y+++   G+ PT VTY
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + L + L+   + E AL +F  M  +D   +T TY   I G C
Sbjct: 381 SALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFC 423



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++   +K        +   ++   GL P++ TY+  I+  CK G+ SL F I
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKI 609

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +  + PN+ T++SLI GLC E +  +A  L       GCEPNV TY TL+ GLC 
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCG 665

Query: 129 TGHTIVALNLFKEMTNG-----------------------------NGEIGVVFKPNTVT 159
            G    A  L + M                                +  +   F+P    
Sbjct: 666 KGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  +I  LCK  F  KA+ +F  M  ++ N + V +T L+ G     + + +  LL  M 
Sbjct: 726 YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVME 785

Query: 220 DQGVQPNVVSSNVIMNELCKNG 241
            +    N  +  ++  EL   G
Sbjct: 786 SRNCTLNFQTRVMLARELSALG 807



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 7/159 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  LL    KN   ++ L +F  + + G  P L  Y  LI   CK         +
Sbjct: 686 PSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCM 745

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+  +  + V +T L+ GL  E     +  L   +++  C  N  T   L   L  
Sbjct: 746 FQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSA 805

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G +I       E+   + ++G+V +    T  ++ D +
Sbjct: 806 LGCSI-------EIPQISKQLGIVKEKQKQTADVLRDDI 837


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 194/370 (52%), Gaps = 9/370 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +N L+    +    + V  LF  +   G+ PD+ TYS +IN   +MG V +   +  
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302

Query: 71  RI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
           ++ LR C +PNV TFTSL+KG     R+ EA  L+ ++   G EPN + YNTLI+GLC  
Sbjct: 303 KMFLRGC-SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSY 361

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G  + A+++ ++M   NG    VF PN  TYS +IDG  K G +  A E++ +M      
Sbjct: 362 GKMVEAVSVSQKMER-NG----VF-PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNVV YT ++   C  + +N A  L+  M +    PN ++ N  +  LC +GK + A ++
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L+ M Q    PN  TYN ++DG     +     ++   +E M  K +  +YN +++G+C 
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTC 368
               + AL +  +L   G KP  +TYNT+ +   +  + + A++L   + +  +   D  
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595

Query: 369 TYRTFIDGLC 378
           TY + + G+C
Sbjct: 596 TYTSLLWGVC 605



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 34/403 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+LL  L KN   D    L   ++  G  PD  +Y+ +++  C++G+V     +  
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           RI    F P    + +LI G C E ++ E   LF ++   G +P+VITY+T+IN L   G
Sbjct: 238 RI--KSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 131 HTIVALNL---------------FKEMTNG--------------NGEIGVVFKPNTVTYS 161
           +  +AL +               F  +  G              N  I    +PNTV Y+
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I GLC  G + +A  +  +M+   + PN  TY++LI GF  A D   A  +  +M+  
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  PNVV    +++ LC+N   ++A  L++ M   +  PN  T+NT + G C +GK    
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            ++   M   GC  +  +YN +++G    K   EAL +  E+    IK  +VTYNT+  G
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
                  + AL++  ++       D+ TY T I   C + +V+
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVK 575



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 176/369 (47%), Gaps = 11/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L     +  +  ++  +   G+  ++YTY++L+   CK  +V     +
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V++T+++  +C   ++ EA  L  ++K+F     V  YN LING CR
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                    LF EM            P+ +TYS +I+ L + G V+ A  +  +M     
Sbjct: 256 EHKMEEVFELFNEMAVEG------IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGC 309

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNV T+TSL+ G+       EA  L   M+ +G +PN V+ N +++ LC  GKM  A  
Sbjct: 310 SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  V PN  TY+TL+DGF   G +    E++  M + GC  +   Y  +++  C
Sbjct: 370 VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLC 429

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +N     AL L   +      P  +T+NT   GL    + E A+K+  +M+    A +  
Sbjct: 430 RNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVT 489

Query: 369 TYRTFIDGL 377
           TY   +DGL
Sbjct: 490 TYNEVLDGL 498



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 15/368 (4%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFK--RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++  ++  L   +  D +  L +  +L  I    DL+   I+IN + + G        F 
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFV--IVINAYRRAGLAEQALKTFY 132

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           RI      P+V  +  ++  L +E++      ++  +K  G E NV TYN L+  LC+  
Sbjct: 133 RIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKND 192

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM+      G +  P+ V+Y+ ++  +C+ G V++A+EL +++K      
Sbjct: 193 RVDAARKLLAEMSYK----GCI--PDAVSYTTVVSSMCRLGKVEEARELSMRIK-----S 241

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            V  Y +LI+GFC  +   E   L  EM  +G+ P+V++ + ++N L + G ++ A  +L
Sbjct: 242 FVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVL 301

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M      PN  T+ +LM G+ + G++    +L+  M   G + +  +YN LI+G C  
Sbjct: 302 AKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSY 361

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++ EA+S+  ++   G+ P   TY+TL  G  +      A +++ +M  N    +   Y
Sbjct: 362 GKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVY 421

Query: 371 RTFIDGLC 378
              +D LC
Sbjct: 422 TCMVDVLC 429



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 42/338 (12%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   ++N L+  L         +S+ +++   G+FP+  TYS LI+ F K G +    
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I+ +++ +   PNVV +T ++  LC  S    A  L   +    C PN IT+NT I GL
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C +G T  A+ +  +M     + G    PN  TY+ ++DGL       +A ++  +++  
Sbjct: 464 CCSGKTEWAMKVLNQMR----QYGCA--PNVTTYNEVLDGLFNAKRTREALQIVGEIEEM 517

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  N+VTY +++ GFCHA  +  A  +  +++  G +P+ ++ N ++   CK G++  A
Sbjct: 518 EIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTA 577

Query: 247 SRLLD-LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            +L+D L  + +  P+ FTY +L+ G C     N +                        
Sbjct: 578 IQLVDRLTKKGEGYPDVFTYTSLLWGVC-----NWIG----------------------- 609

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
                  V+EA+   +++  +GI P   T+N L  GLF
Sbjct: 610 -------VDEAVVHLDKMINEGICPNRATWNALVRGLF 640



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 146/335 (43%), Gaps = 46/335 (13%)

Query: 77  FAPNVVTFTSLIKGL----------------------CAESRIV-------------EAA 101
           F    +T+T++IK L                      C E   V             +A 
Sbjct: 69  FKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
             F ++  FGC+P+V  YN +++ L       +   ++  M     E+      N  TY+
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIEL------NVYTYN 182

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           +++  LCK   VD A++L  +M Y+   P+ V+YT+++   C      EA+ L +     
Sbjct: 183 MLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMR---- 238

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            ++  V   N ++N  C+  KM+    L + M    + P+  TY+T+++     G +   
Sbjct: 239 -IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA 297

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +   M   GC  +  ++  L+ GY     + EAL L+N +  +G +P  V YNTL HG
Sbjct: 298 LAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 357

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           L    +   A+ +  +M+ N V  +  TY T IDG
Sbjct: 358 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 35/292 (11%)

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           N++  + ++N L    + ++AL+ FK + N N      FK   +TY+ +I  L  E  +D
Sbjct: 36  NLLKESEVLNKLKNEPNILLALHFFKSIANSNS-----FKHTPLTYTTMIKRLGYERDID 90

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
             + L   MK E ++ N   +  +I+ +  A    +A      + + G +P+V   N ++
Sbjct: 91  GIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVL 150

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + L    K    + + + M +  +  N +TYN L+   C   +++  ++L   M   GC 
Sbjct: 151 DALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCI 210

Query: 295 HDDFS------------------------------YNILINGYCKNKEVEEALSLYNELP 324
            D  S                              YN LING+C+  ++EE   L+NE+ 
Sbjct: 211 PDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMA 270

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            +GI P V+TY+T+ + L E+   E AL +  +M     + +  T+ + + G
Sbjct: 271 VEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKG 322


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN L+G L +N  ++ V  +  ++   G  PD+  Y+ +++  CK G + +   
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I  R+      PNVV + +++KGLC+  R  +A  L  ++    C  + +T+N L++  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     + L ++M     E G V  P+ +TY+ +I+G CKEG +D+A  L   M    
Sbjct: 377 QNGLVYRVIELLEQML----EHGCV--PDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN ++YT ++ G C A  W +A+ L+ +M++QG  PN V+ N ++N LCK G ++ A 
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M+     P+  +Y+T++DG    GK +   EL   M + G   +   Y+ + +  
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 550

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   +   + +++ +    I+   V YN +   L +    +RA++    M  +    + 
Sbjct: 551 SKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610

Query: 368 CTYRTFIDGL 377
            TY   I GL
Sbjct: 611 STYTILIRGL 620



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+N +L  L   K +  V  L + +  +G  P++ T++ LI   C+ G       +
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++     P++  + +++ G+C E  +  A  +  ++ ++G +PNV+ YNT++ GLC 
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM + +  +      + VT++I++D  C+ G V +  EL  QM     
Sbjct: 343 AERWEQAEELLAEMFDNDCPL------DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V+TYT++I+GFC     +EA  LL  M   G +PN +S  +++  LC   +  +A  
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M++    PN  T+NT+++  C  G + +  EL   M   GC  D  SY+ +I+G  
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + +EAL L N +  KG+ P  + Y+++   L +  +  R +++F  +Q   + +D  
Sbjct: 517 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAV 576

Query: 369 TYRTFIDGLCVR 380
            Y   I  LC R
Sbjct: 577 LYNAVISSLCKR 588



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 10/381 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKH--YDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           MR    +P P     IL    ++     + + + + + L+  G   D+   ++++N  C 
Sbjct: 141 MRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200

Query: 59  MGQVSLGFVIFGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
            G      +   R L + F   P+VV++ +++KGLC   R      L  ++   GC PNV
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           +T+NTLI  LCR G       +  +M +          P+   Y+ ++DG+CKEG ++ A
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHG------CTPDIRMYATVLDGVCKEGHLEVA 314

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
            E+  +M    L PNVV Y +++ G C A  W +A+ LL EM D     + V+ N++++ 
Sbjct: 315 HEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDF 374

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            C+NG +     LL+ M++    P+  TY T+++GFC  G I+    L  SM + GC+ +
Sbjct: 375 FCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPN 434

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY I++ G C  +   +A  L +++  +G  P  VT+NT+ + L +    E+A++L  
Sbjct: 435 TISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK 494

Query: 357 EMQGNDVAADTCTYRTFIDGL 377
           +M  N  + D  +Y T IDGL
Sbjct: 495 QMLLNGCSPDLISYSTVIDGL 515



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 6/319 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  L   + ++    L   +       D  T++IL++ FC+ G V     +
Sbjct: 328 PNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIEL 387

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + A GC PN I+Y  ++ GLC 
Sbjct: 388 LEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCS 447

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A +L  +M     E G    PN VT++ +I+ LCK+G V++A EL  QM     
Sbjct: 448 AERWVDAEDLMSQMI----EQGC--SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++++Y+++I G   A   +EA  LL  MV++G+ PN +  + I + L K G+++   +
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C  G  +R  E    M S GC  ++ +Y ILI G  
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLA 621

Query: 309 KNKEVEEALSLYNELPFKG 327
               V+EA  +  EL  KG
Sbjct: 622 SEGFVKEAQEMLTELCSKG 640



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 8/287 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FNIL+    +N     V+ L +++   G  PD+ TY+ +IN FCK G +    ++   +
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN +++T ++KGLC+  R V+A  L +++   GC PN +T+NT+IN LC+ G  
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 133 IVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
             A+ L K+M  NG         P+ ++YS +IDGL K G  D+A EL   M  + ++PN
Sbjct: 487 EQAIELLKQMLLNG-------CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            + Y+S+          N    +   + D  ++ + V  N +++ LCK G  D A   L 
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            MV     PN  TY  L+ G    G +   +E+   + S G     F
Sbjct: 600 YMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHF 646



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 14/300 (4%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + +++ G C   ++  A  L   +      PN  TY  ++  LC  G    AL++  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVPV---PPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD---KAKELFLQMKYENLNPNVVTYTSLIH 200
                      P    Y +I++  C  G       A  +   +       +V     +++
Sbjct: 143 RRG------CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLN 196

Query: 201 GFC-HANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
             C      +EA  LL ++    G  P+VVS N ++  LC   +      L++ MV+   
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN  T+NTL+   C  G   RV ++   M   GC  D   Y  +++G CK   +E A  
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + +P  G+KP VV YNT+  GL    + E+A +L  EM  ND   D  T+   +D  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ FCK G++ L
Sbjct: 99  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRL 158

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 159 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLIN 218

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+         LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 219 GLCKESKMDDXNELFDEMLD----XGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 272

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P++VTY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 273 SQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 332

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 333 TAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 392

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V     L  E+   G  P+VVTYN L +G
Sbjct: 393 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +   L   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 117 KLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV 176

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  + G       L K M       GV  +P+  TYS++I+GLCKE  +D   
Sbjct: 177 SFNTLMNGYIKLGDLNEXFRLKKAMQAS----GV--QPDVYTYSVLINGLCKESKMDDXN 230

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M    L PN VT+T+LI G C     + A  +  +M+ Q + P++V+ N ++  L
Sbjct: 231 ELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGL 290

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 291 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDD 350

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP + TY  + +   +        KL  E
Sbjct: 351 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 410

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 411 MQRDGYVPSVVTYNVLMNG 429



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+    D NE   L   M 
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+ + L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVD 262

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 323 DGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLC 361



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+++ +++G  K 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLMNGYIKL 188

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++   L   M+   + P+V TY+ LI+G C  +  ++   L  EM+D G+ PN V+ 
Sbjct: 189 GDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTF 248

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSM 308

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 309 KGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVD 368

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 369 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 401



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S II 
Sbjct: 19  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGIIT 78

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 79  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 138

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G++  A  + D + +  +RP+  ++NTLM+G+   G +N    L 
Sbjct: 139 SLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLK 198

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++   L++E+   G+ P  VT+ TL  G  + 
Sbjct: 199 KAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKN 258

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 259 GRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLK 297


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN  L  L +    +T L LF  + S G  PD+ +Y+I+I+  C   +      +
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + R++    +P+     +L+ GLC+  R+  A  L   +   G + N + YN LI+G CR
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +   M+      G V  P+ VTY+I+++  C+EG VD+A  L   M+   +
Sbjct: 237 MGRVDKAMKIKAFMS----RTGCV--PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ +Y  L+ GFC AN  + A  +++E +      +VVS N ++   CK  +      
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYE 350

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    +RP+  T+N L+D F   G  + VK+L   M  M    D   Y  +++  C
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN +V+ A S++ ++   G+ P V++YN L +G  +  +   A+ LF EMQ   +  D  
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470

Query: 369 TYRTFIDGL 377
           TY+  + GL
Sbjct: 471 TYKLIVGGL 479



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 9/359 (2%)

Query: 3   HMHPSP---PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           H  PS    P V S+ I++  L   K +D    +++RL   GL PD      L+   C  
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G+V L + +   +++     N + + +LI G C   R+ +A  +   +   GC P+++TY
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N L+N  C  G    A+ L + M     E      P+  +Y+ ++ G CK   VD+A  +
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMERSGVE------PDLYSYNELLKGFCKANMVDRAHLM 316

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
            ++        +VV+Y ++I  FC A    +   L  EM  +G++P++V+ N++++   +
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G      +LLD M +  V P+   Y  ++D  C  GK++    +F  M   G   D  S
Sbjct: 377 EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVIS 436

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           YN L+NG+CK   V +A+ L++E+  KG+ P  VTY  +  GL   ++   A +++ +M
Sbjct: 437 YNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 172/393 (43%), Gaps = 36/393 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCK----------- 58
            +N  +G L ++         ++R        L P  +TYS  I+  C            
Sbjct: 47  DYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP--FTYSRFISALCSAPNNINLPLIH 104

Query: 59  ---MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
              +   SLGFV           P++  F + +  LC ++R+  A  LF  + + G +P+
Sbjct: 105 SLLLDMDSLGFV-----------PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPD 153

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V++Y  +I+ LC       A  +++ + +          P+      ++ GLC  G VD 
Sbjct: 154 VVSYTIIIDALCNAKRFDEAAKVWRRLIDKG------LSPDYKACVALVVGLCSGGRVDL 207

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A EL + +    +  N + Y +LI GFC     ++A  +   M   G  P++V+ N+++N
Sbjct: 208 AYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLN 267

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             C+ G +D A RL++ M +  V P+ ++YN L+ GFC    ++R   + V         
Sbjct: 268 YCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC 327

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  SYN +I  +CK +   +   L+ E+  KGI+P +VT+N L              KL 
Sbjct: 328 DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLL 387

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            EM    V  D   Y   +D LC   +V   ++
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHS 420



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 164/343 (47%), Gaps = 8/343 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            Y   I+   K G ++    +F ++  S      V +   I  L   SR+  A   + + 
Sbjct: 12  AYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRH 71

Query: 108 ---KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
              + F   P   TY+  I+ LC   + I  L L   +      +G  F P+   ++  +
Sbjct: 72  VIPRGFSLLP--FTYSRFISALCSAPNNI-NLPLIHSLLLDMDSLG--FVPDIWAFNTYL 126

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           + LC++  ++ A ELF  M  +  +P+VV+YT +I   C+A  ++EA  +   ++D+G+ 
Sbjct: 127 NLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLS 186

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+  +   ++  LC  G++D A  L+  +++  V+ N+  YN L+DGFC  G++++  ++
Sbjct: 187 PDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKI 246

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   GC  D  +YNIL+N  C+   V+EA+ L   +   G++P + +YN L  G  +
Sbjct: 247 KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
               +RA  + VE        D  +Y T I   C   + R  Y
Sbjct: 307 ANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 134/264 (50%), Gaps = 6/264 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NILL    +    D  + L + +   G+ PDLY+Y+ L+  FCK   V    ++
Sbjct: 257 PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLM 316

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +++    +VV++ ++I   C   R  +   LF ++   G  P+++T+N LI+   R
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T V   L  EMT       +   P+ + Y+ ++D LCK G VD A  +F  M    +
Sbjct: 377 EGSTHVVKKLLDEMTK------MRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGV 430

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+V++Y +L++GFC  +   +A  L  EM  +G+ P+ V+  +I+  L +  K+  A R
Sbjct: 431 NPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACR 490

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF 272
           + D M++     N     TL++  
Sbjct: 491 VWDQMMERGFTLNRHLSETLVNAI 514


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL    + K  D V  + K + + G+ P + TY+IL++       ++    +F  + 
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               + +V  ++S+I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  +M      +G+    N + ++ +IDG C++  VDKA E+ + M+   +  +V 
Sbjct: 301 AAEMLVTDMQVRG--VGI----NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L  G   AN  +EAK LL  M+++GV+PN VS   +++  C  G M  A RL   M
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+  TYN +MDG+   G I   +     ME  G   D +SY  L++G+C N +V
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 474

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + AL L+ E+  +G KP +V Y  L  GL +  ++E A +L+  M G+ +  D   Y   
Sbjct: 475 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 534

Query: 374 IDGL 377
           +  L
Sbjct: 535 VGSL 538



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 169/391 (43%), Gaps = 46/391 (11%)

Query: 26  HYDTVLSLFKRLNSIGLFPDLYT---YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           H DT   L K+  +    PD  T    S++++ +CK G+V+    +   + R     N +
Sbjct: 122 HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            + SL+     E      A +   ++  G EP V TY  L++GL           +F+EM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            + N    V F      YS +I+  C+ G V +A E+F +     + PN  TY +LI+GF
Sbjct: 240 KSKNLSGDVYF------YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF 293

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN---------------------- 240
           C       A+ L+ +M  +GV  N +  N +++  C+                       
Sbjct: 294 CKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 353

Query: 241 -------------GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                         +MD A  LL +M++  VRPN  +Y TL+   C  G +   + LF  
Sbjct: 354 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G +    +YN++++GY K   + EA    NE+  KG+ P + +Y  L HG     +
Sbjct: 414 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 473

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + AL+LF EM+      +   Y   I GL 
Sbjct: 474 VDVALRLFEEMKQRGSKPNLVAYTALISGLA 504



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 11/328 (3%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTS---LIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           G +     +  +   SC  P+ VT  S   ++ G C   R+  A  L  ++   G + N 
Sbjct: 121 GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN+L++   R         + K M N         +P   TY+I++DGL     + K 
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEG------IEPTVGTYTILVDGLSAARDITKV 232

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +F +MK +NL+ +V  Y+S+I+ +C A +   A  +  E V  G++PN  +   ++N 
Sbjct: 233 EAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING 292

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+M+ A  L+  M    V  N   +NT++DG+C    +++  E+ + ME MG + D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN L  G  +   ++EA +L   +  KG++P  V+Y TL            A +LF 
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFR 412

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           EM GN       TY   +DG   +  +R
Sbjct: 413 EMAGNGAEPSLVTYNVMMDGYIKKGSIR 440



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 151/333 (45%), Gaps = 29/333 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L+  +    V ++F+ + S  L  D+Y YS +IN +C+ G V     +
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   + +   PN  T+ +LI G C   ++  A  L T ++  G   N I +NT+I+G CR
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
                 AL +   M     E+ V                               +PN V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I   C EG + +A+ LF +M      P++VTY  ++ G+       EA+    EM 
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P++ S   +++  C NGK+D A RL + M Q   +PN   Y  L+ G    G+  
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
              +L+ +M   G   DD  Y+ L+     +K+
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKK 543



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 6/235 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    +    D  L +   +  +G+  D+YTY+ L     +  ++     +   ++
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN V++T+LI   C E  +VEA  LF ++   G EP+++TYN +++G  + G +I
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG-SI 439

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                FK      G +     P+  +Y+ ++ G C  G VD A  LF +MK     PN+V
Sbjct: 440 REAERFKNEMEKKGLV-----PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV 494

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            YT+LI G        EA  L   M+  G+ P+    + ++  L  + K +   R
Sbjct: 495 AYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           + +L +++R+   G+ P LYT++ L+N       +     +F  +      P+VV++ ++
Sbjct: 207 EELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           IKG C      +A   FT ++    EP+ ITY TLI      G+    L+L++EM     
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME---- 322

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           E G+   P+   YS++I GLCK+G   +   +F  M  +    NV  YT+LI  +    +
Sbjct: 323 ERGLEIPPHA--YSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGN 380

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            NEA  L   M  +G +P+ V+  VI+N LCK+G++D A    +     +V  NA  Y++
Sbjct: 381 VNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSS 440

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+DG    G+++  ++ F  M   GC  D + YN LI+   K+ ++EEAL L+  +  +G
Sbjct: 441 LIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEG 500

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              TV TY  L  GLF+  + E ALKL+  M    +   T ++R    GLC+  +V
Sbjct: 501 CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKV 556



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 183/379 (48%), Gaps = 9/379 (2%)

Query: 2   RHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           R M  S   P + +FN LL  L  +   ++   +F+ +    + PD+ +Y+ +I  +CK 
Sbjct: 214 RRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKA 273

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G        F  + +    P+ +T+ +LI+   +E        L+ +++  G E     Y
Sbjct: 274 GNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAY 333

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           + +I GLC+ G T+   ++F+ M N  G      K N   Y+ +ID   K G V++A  L
Sbjct: 334 SLVIGGLCKDGRTVEGSSVFENM-NKKG-----CKANVAIYTALIDAYGKNGNVNEAINL 387

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
           F +MK E   P+ VTY  +++G C +   +EA        D  V  N +  + +++ L K
Sbjct: 388 FERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGK 447

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G++D A +  + MV+     +++ YN L+D    +GK+     LF  ME  GC    ++
Sbjct: 448 AGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYT 507

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y ILI+G  K    EEAL L++ +  KGI PT  ++  L  GL    +  RA K+  E+ 
Sbjct: 508 YTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELA 567

Query: 360 GNDVAADTCTYRTFIDGLC 378
              V  +T  +   I+ LC
Sbjct: 568 PMGVIPET-AFEDMINVLC 585



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 40/274 (14%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+ +  L+    KN + +  ++LF+R+   G  PD  TY +++N  CK G++      F 
Sbjct: 365 VAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE 424

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
               +  A N + ++SLI GL    R+ EA   F ++   GC  +   YN LI+ L ++G
Sbjct: 425 FCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSG 484

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL LFK M     +  V       TY+I+I GL KE   ++A +L+  M  + + P
Sbjct: 485 KMEEALVLFKRMEKEGCDQTVY------TYTILISGLFKEHRNEEALKLWDLMIDKGITP 538

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI----------------- 233
              ++ +L  G C +     A  +L E+   GV P     ++I                 
Sbjct: 539 TTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLAD 598

Query: 234 -----------------MNELCKNGKMDNASRLL 250
                            +N L K G  D A +L+
Sbjct: 599 GIVDRGREVPGRVRTILINALRKAGNADLAMKLM 632



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%)

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G V++   ++ +MK   + P++ T+  L++G  ++     A+ +   M    + P+VVS 
Sbjct: 204 GMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSY 263

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N ++   CK G    A      M + ++ P+  TY TL+      G  +    L+  ME 
Sbjct: 264 NTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE 323

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G +    +Y+++I G CK+    E  S++  +  KG K  V  Y  L     +      
Sbjct: 324 RGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNE 383

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A+ LF  M+G     D  TY   ++GLC
Sbjct: 384 AINLFERMKGEGFEPDDVTYGVIVNGLC 411



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 3/229 (1%)

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWN 209
           +   PN V + +  D +   G  D A   F    K +N    +  Y SLI     ++D++
Sbjct: 115 IKLSPNFVAFVLKSDAI--RGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFD 172

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
             + +  E  ++G    V ++N ++      G ++    +   M +  + P+ +T+N L+
Sbjct: 173 RVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLL 232

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G   +  I   + +F  ME      D  SYN +I GYCK    ++A+  + ++  + ++
Sbjct: 233 NGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLE 292

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P  +TY TL    +     +  L L+ EM+   +      Y   I GLC
Sbjct: 293 PDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLC 341


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 187/370 (50%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   +L  LAK +  D VL LF  + S+G+ PD+Y Y  +I  FC++   +    +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  S    NVV +  LI GLC   R+ EA  +   L   G   + +TY TL+ GLC+
Sbjct: 251 IQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                V   +  EM     E+G  F P     S +++GL ++G V  A +L  ++K    
Sbjct: 309 VQEFEVGAGVMDEMI----ELG--FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGA 362

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y +LI+  C    ++EA+ L  EM ++G+  N V+ +++++  C+ GK+D A  
Sbjct: 363 MPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIH 422

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   ++   + YN+L++G C  G ++     F  M   G K    SY  LI+GYC
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++ EA  LY+E+  KGI P   T+ TL   LF   +   A +LF EM   ++  +  
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542

Query: 369 TYRTFIDGLC 378
           TY   I+G C
Sbjct: 543 TYNVMIEGHC 552



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 178/371 (47%), Gaps = 9/371 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P+   +SS  ++ G   K K  D    L  R+  +G  P L+ Y+ LIN  CK G+    
Sbjct: 329 PTEAALSS--LVEGLRRKGKVVDA-FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEA 385

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++F  +       N VT++ LI   C   ++  A     K+   G +  V  YN+LING
Sbjct: 386 ELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLING 445

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G+   A++ F EM +         KP  V+Y+ +I G C +G + +A  L+ +M  
Sbjct: 446 HCKLGNLSAAVSFFDEMIDKG------LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + PN  T+T+LI     AN   +A  L  EM++Q + PN V+ NV++   CK G    
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL+ MVQ  + P+ +TY  L+   C TG++   K+    +     K ++  Y+ L++
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCK   + +AL +  E+  +G+   +V Y  L  G  + +       L   M    +  
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679

Query: 366 DTCTYRTFIDG 376
           D   Y + IDG
Sbjct: 680 DKVIYTSMIDG 690



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 179/384 (46%), Gaps = 6/384 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++ M  S   V  +N+L+  L KNK     + +   L   GL     TY  L+   CK+ 
Sbjct: 251 IQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +  +G  +   ++   F P     +SL++GL  + ++V+A  L  ++K  G  P++  YN
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYN 370

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LIN LC+ G    A  LFKEM    GE G+    N VTYSI+ID  C+ G +D A    
Sbjct: 371 ALINSLCKDGKFDEAELLFKEM----GEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    +   V  Y SLI+G C   + + A     EM+D+G++P VVS   +++  C  
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A RL   M    + PN +T+ TL+       ++     LF  M       ++ +Y
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N++I G+CK     +A  L N++  KG+ P   TY  L   L    +   A K   ++  
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
                +   Y   + G C   ++R
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLR 628



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 176/382 (46%), Gaps = 7/382 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  L +         LF  +    + P+  TY+++I   CK G     F +
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    P+  T+  LI  LC+  R+ EA      L     + N + Y+ L++G C+
Sbjct: 564 LNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCK 623

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL + +EM     ++      + V Y+++IDG  KE        L   M  + L
Sbjct: 624 EGRLRDALGVCREMVKRGVDM------DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V YTS+I G+  A    +A G+   M+D+G  PN+V+   ++NELCK G MD A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M+  +  PN  TY   +D     G + +  +L   M   G   +  SYNIL+ G+C
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFC 796

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VEEA  L +E+    I P  +TY+T+ +        + A++ +  M    +  DT 
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
            Y   I G C+  ++   +  R
Sbjct: 857 AYNFLIYGCCIAGELGKAFELR 878



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 178/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L K+  +D    LFK +   GL  +  TYSILI+ FC+ G++      
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHF 423

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G+++ +     V  + SLI G C    +  A + F ++   G +P V++Y +LI+G C 
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L+ EMT G G       PNT T++ +I  L +   +  A  LF +M  +N+
Sbjct: 484 KGKLHEAFRLYHEMT-GKG-----IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY  +I G C   +  +A  LL +MV +G+ P+  +   +++ LC  G++  A +
Sbjct: 538 MPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKK 597

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +D + +   + N   Y+ L+ G+C  G++     +   M   G   D   Y +LI+G  
Sbjct: 598 FIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTI 657

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K ++      L   +  + ++P  V Y ++  G  +    ++A  ++  M       +  
Sbjct: 658 KEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIV 717

Query: 369 TYRTFIDGLC 378
           TY T I+ LC
Sbjct: 718 TYTTLINELC 727



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++IL+    +    DT +    ++   G+   +Y Y+ LIN  CK+G +S     F  +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P VV++TSLI G C + ++ EA  L+ ++   G  PN  T+ TLI+ L R    
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF EM   N        PN VTY+++I+G CKEG   KA EL  QM  + L P+ 
Sbjct: 523 TDAFRLFDEMLEQN------MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY  LI   C      EAK  + ++  +  + N +  + +++  CK G++ +A  +   
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV+  V  +   Y  L+DG       + V  L  +M     + D   Y  +I+GY K   
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V++A  +++ +  +G  P +VTY TL + L +    ++A  L+ EM  ++   +  TY  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 373 FIDGL 377
           F+D L
Sbjct: 757 FLDHL 761



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 173/362 (47%), Gaps = 30/362 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K  +      L  ++   GL PD YTY  LI+  C  G+V      
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R  F  N + +++L+ G C E R+ +A  +  ++   G + +++ Y  LI+G  +
Sbjct: 599 IDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK 658

Query: 129 TGHTIVALNLFK---------------EMTNGNGEIGVVFK--------------PNTVT 159
              T     L K                M +G  + G V K              PN VT
Sbjct: 659 EQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVT 718

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I+ LCK G +DKA+ L+ +M   N  PN VTY   +          +A  L  +M+
Sbjct: 719 YTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML 778

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+  N VS N+++   CK G+++ A++LLD M+   + P+  TY+T++   C  G ++
Sbjct: 779 -KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLD 837

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E + +M + G K D  +YN LI G C   E+ +A  L +++  +G+KP   T+ +L 
Sbjct: 838 GAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLS 897

Query: 340 HG 341
           HG
Sbjct: 898 HG 899



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 20/212 (9%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQP--------------NVVS 229
           ++N N + +++  LIH   +AN +  A  LL  ++ + G+ P              + +S
Sbjct: 98  HKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFIS 157

Query: 230 S---NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           S   ++++    +  +M ++  +  LM QC++ P   T   +++G     +++ V  LF 
Sbjct: 158 SLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFG 217

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            + SMG + D + Y  +I  +C+ K   +A  +   +    +   VV YN L HGL + +
Sbjct: 218 EILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNK 275

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   A+++   +    + A   TY T + GLC
Sbjct: 276 RVWEAVEIKNGLIQKGLTASEVTYCTLVLGLC 307



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 33/261 (12%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +++ + ++I    +E  +  +  +F  M+   L P V T   +++G       +    L 
Sbjct: 157 SSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216

Query: 216 IEMVDQGVQP---------------------------------NVVSSNVIMNELCKNGK 242
            E++  G++P                                 NVV  NV+++ LCKN +
Sbjct: 217 GEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKR 276

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  + + ++Q  +  +  TY TL+ G C   +      +   M  +G    + + + 
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G  +  +V +A  L N +   G  P++  YN L + L +  + + A  LF EM    
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 363 VAADTCTYRTFIDGLCVRPQV 383
           + A+  TY   ID  C R ++
Sbjct: 397 LCANDVTYSILIDSFCRRGKL 417



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 50/116 (43%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NIL+    K    +    L   +    +FPD  TYS +I   C+ G +      +  +
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           L     P+ + +  LI G C    + +A  L   +   G +PN  T+ +L +G  R
Sbjct: 847 LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 195/382 (51%), Gaps = 9/382 (2%)

Query: 9   PPVSSFNIL-LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   SF  L LGC  + + ++   +L   +   G   D  T ++++  FC+ G+      
Sbjct: 179 PDARSFRALVLGCCQEGR-FEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPG 237

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +FGR++     PNVV +T+ + GLC    + +A  +  ++   G +PNV T+ +LI+GLC
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A  LF ++   +      +KPN  TY+++I G CKEG + +A+ L  +M  + 
Sbjct: 298 KIGWTERAFRLFLKLVKSSS-----YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN  TYT+LI G C    ++ A  L+ +M  +G  PN+ + N I+   CK GK+  A 
Sbjct: 353 LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAY 412

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L +     + P+  TY  L+   C  G I    +LF  M    C  D  +Y  +I  Y
Sbjct: 413 KVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMY 472

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ +++E++  L+++    G+ PT  TY ++  G   + ++  ALK+F  M  +    D 
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDP 532

Query: 368 CTYRTFIDGLCVRPQVRFTYAR 389
            TY   I GLC   + R   AR
Sbjct: 533 ITYGALISGLC--KESRLEEAR 552



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 180/386 (46%), Gaps = 23/386 (5%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            +++    +   +  V  LF R+  +G  P++  Y+  ++  CK G V   F +   ++ 
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI 133
               PNV T TSLI GLC       A  LF KL K+   +PNV TY  +I G C+ G   
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M     E G+   PNT TY+ +IDG C+ G  D+A EL  +MK E   PN+ 
Sbjct: 340 RAEMLLGRMV----EQGLA--PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIY 393

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I GFC      +A  +L     QG+ P+ V+  +++ E CK G +  A  L + M
Sbjct: 394 TYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM 453

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    P+  TY T++  +C   ++ + ++LF    S+G      +Y  +I GYC+  + 
Sbjct: 454 AENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKS 513

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN-----DVAADTC 368
             AL ++  +   G  P  +TY  L  GL +  + E A  LF  M        DV   T 
Sbjct: 514 TSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTL 573

Query: 369 TYR-----------TFIDGLCVRPQV 383
            Y            +F+DGL  R Q 
Sbjct: 574 AYEYCRRDKTTIAVSFLDGLDKRQQA 599



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 9/280 (3%)

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
            G  P+  ++  L+ G C+ G    A  L   M          F  ++ T ++++   C+
Sbjct: 175 MGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREG------FSLDSATCTVVVRAFCR 228

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +G       LF +M      PNVV YT+ + G C      +A  +L EMV +G++PNV +
Sbjct: 229 QGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYT 288

Query: 230 SNVIMNELCKNGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
              +++ LCK G  + A RL L L+     +PN  TY  ++ G+C  GK+ R + L   M
Sbjct: 289 HTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM 348

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
              G   +  +Y  LI+G+C+    + A  L N++  +G  P + TYN +  G  +  + 
Sbjct: 349 VEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKI 408

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           ++A K+        +  D  TY   I   C   Q   TYA
Sbjct: 409 QQAYKVLRMATSQGLCPDKVTYTMLITEHC--KQGHITYA 446



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 33/376 (8%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLFPDLY----TYSILINCFCKMGQVSLGFVIFGRIL 73
           L  +A N+     L+LF+RL++    PDL      Y+     F   G + +       ++
Sbjct: 64  LTSVADNEGSAAALALFRRLST---RPDLRHLMRLYATAATLFVARGNLPMAHEAARAMV 120

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN-GLCRTGHT 132
            +    N               R+ EA  +  +L++ G    V T N ++  GL +  H 
Sbjct: 121 AAFAETN---------------RLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHF 165

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A   F          G+  +P+  ++  ++ G C+EG  ++A  L   M  E  + + 
Sbjct: 166 AHARQAFD---------GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDS 216

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T T ++  FC    + +  GL   MV+ G  PNVV+    ++ LCK G +  A  +L+ 
Sbjct: 217 ATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEE 276

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNK 311
           MV   ++PN +T+ +L+DG C  G   R   LF+ + +S   K +  +Y ++I GYCK  
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++  A  L   +  +G+ P   TY TL  G       +RA +L  +M+      +  TY 
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYN 396

Query: 372 TFIDGLCVRPQVRFTY 387
             I G C + +++  Y
Sbjct: 397 AIIGGFCKKGKIQQAY 412



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+    K  H    L LF ++      PD+ TY+ +I  +C+  Q+     +
Sbjct: 425 PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQL 484

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F + L     P   T+TS+I G C   +   A  +F ++   GC P+ ITY  LI+GLC+
Sbjct: 485 FDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCK 544

Query: 129 TGHTIVALNLFKEMTN 144
                 A  LF+ M +
Sbjct: 545 ESRLEEARALFETMLD 560



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++    + +  +    LF +  SIGL P   TY+ +I  +C++G+ +    +
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++    P+ +T+ +LI GLC ESR+ EA ALF  +      P  +T  TL    CR
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCR 579

Query: 129 TGHTIVALNLF 139
              T +A++  
Sbjct: 580 RDKTTIAVSFL 590


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 178/337 (52%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL + FCK G + +
Sbjct: 101 HKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G  P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDXANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D N+A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N  CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +   L   +  ++  F  L    C E  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L K   + +G       P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFKL-KSAMHASG-----VXPDVYTYSVLINGLCKESKMDXAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G ++ A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + + + +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +  A    TY   ++G
Sbjct: 413 MQXDGHAPSVVTYNVLMNG 431



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 116/219 (52%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I+    CKEG +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M 
Sbjct: 145 FNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMH 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV P+V + +V++N LCK  KMD A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++ +A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L     P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTT 322

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQEN------IRLDDVAYTALISGLCQEGRSVDAEKMMR 376

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           +M    L P+  TYT +I+  C   D  +   LL EM   G  P+VV+ NV+MN
Sbjct: 377 EMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L +  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+  +L   M    + P+V TY+ LI+G C  +  + A  L  EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G +N+  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+ +C +  V
Sbjct: 371 AEKMMREMLSVGLKPDTGTYTMIINEVCKKGDV 403



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   +L   M    
Sbjct: 148 LXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +     +A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 23/298 (7%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN---------GNGEIGVV 152
           + FT L +    P   T+   +   C   H +    +F E  +         G G    V
Sbjct: 2   SFFTWLSS----PANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAV 57

Query: 153 F----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           F          + +   +S +I    + GF+  A E +   +         T   ++   
Sbjct: 58  FAAILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHL 117

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                +    G   E ++ G   ++   N++ +  CK G +  A  + D + +  +RP+ 
Sbjct: 118 MKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSV 177

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            +YNTLM+G+   G ++   +L  +M + G   D ++Y++LING CK  +++ A  L++E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDE 237

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           +  KG+ P  VT+ TL  G  +  + + A++++ +M    +  D  TY T I GLC +
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKEXKMDDANELFDEMLVK----GLV--PNXVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY  LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +B
Sbjct: 275 SQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLB 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 118/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A  +F  +    L P+VV+Y +L++G+    D +E   L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMX 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L  E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLC 363



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 71  DIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 131 KEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C     ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYN L+ G C  G + +  +L
Sbjct: 245 PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK   ++ A      +  + I+   V Y  L  GL +
Sbjct: 305 IXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQ 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +   A K+   M    +  D  TY   I+  C +  V
Sbjct: 365 EGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDV 403



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 99/193 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A  +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 148 LMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYN L +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARR 390
           C    +   +  R
Sbjct: 328 CKEGNLBTAFEHR 340



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLIX 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPX 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY   I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 199/410 (48%), Gaps = 41/410 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L K +  +TV+ L + + S+GL P++YT++I I    + G++   + I
Sbjct: 225 PSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+  +   P+VVT+T LI  LC   ++  A  LF K+KA   +P+ +TY TL++    
Sbjct: 285 LKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSD 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        + EM   +G     + P+ VT++I+ID LCK G VD+A      MK + +
Sbjct: 345 HGDLDAIKEFWSEM-EADG-----YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGV 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ------------------------ 224
            PN+ TY +LI G    N  +EA  L   M   G++                        
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 225 -----------PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                      PN+V+ N  +  L + G+++ A    + + +C + P+A TYN LM  + 
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++   +L   ME  GC  +    N LI+   K   V+EA  ++  +    + PTVV
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           TYNTL  GL +  + + A  LF  M  +D   +T ++ T +D LC   +V
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEV 628



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 176/330 (53%), Gaps = 15/330 (4%)

Query: 52   LINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAA-ALFTKLKA 109
            L+   CK G+    + +F ++ +S C  P++  + SLI GL  ++R+ E A  LF K+K 
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL-KARLTEMAWGLFYKMKN 816

Query: 110  FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF---KPNTVTYSIIIDG 166
             GC P+V TYN  ++ L ++G      +L++EM         +F   KPNT+T++I+I G
Sbjct: 817  AGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM---------LFRGCKPNTITHNIVIFG 867

Query: 167  LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
            L K   +DKA +L+  +   + +P   TY  LI G        EAK    EM+D G  PN
Sbjct: 868  LVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPN 927

Query: 227  VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
                N++MN   K G ++ A  L   MV+  +RP+  +Y+ ++D  C+ GK++     F 
Sbjct: 928  CPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFE 987

Query: 287  SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
             ++  G   D   YN++ING  +++ VEEALSL++E+  +GI P + TYN L   L    
Sbjct: 988  ELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAG 1047

Query: 347  QAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              E A K++ E+Q   +  +  TY   I G
Sbjct: 1048 MVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 174/338 (51%), Gaps = 8/338 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
            +++  +G   + Y+Y  LI+   K G       ++ R++     P++ T+++L+  L  
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIGVV 152
              I     L  ++++ G  PN+ T+   I  L R G    A  + K M + G G     
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCG----- 294

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+ VTY+++ID LC  G ++ AKELFL+MK  +  P+ VTY +L+  F    D +  K
Sbjct: 295 --PDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
               EM   G  P+VV+  ++++ LCK GK+D A   LD+M +  V PN  TYNTL+ G 
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
               +++   ELF SMES+G +   ++Y + I+ Y K+ E  +A+  + ++   GI P +
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           V  N   + L E  + E A + F  ++   +A D  TY
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 186/370 (50%), Gaps = 9/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL   + +   D +   +  + + G  PD+ T++ILI+  CK+G+V   F  
Sbjct: 330 PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGT 389

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +   APN+ T+ +LI GL   +R+ EA  LF  +++ G E    TY   I+   +
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +G +  A+  F++M TNG         PN V  +  +  L ++G +++AKE F  +K   
Sbjct: 450 SGESGKAIKTFEKMKTNG-------IVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +TY  L+  +  A   ++A  LL EM + G  P VV  N +++ L K  ++D A 
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++   M +  + P   TYNTL+ G    G++     LF  M +  C  +  S+N L++  
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CKN EV+ AL +   +      P V+TYNT+ +GL +  +   A  LF +M+   +  D 
Sbjct: 623 CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDY 681

Query: 368 CTYRTFIDGL 377
            T  T + G+
Sbjct: 682 VTLCTLLPGV 691



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 6/346 (1%)

Query: 25   KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
            K  D      K   S  + P L  Y+ LI+   K     + + +F ++  +   P+V T+
Sbjct: 767  KAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTY 826

Query: 85   TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
               +  L    +I E   L+ ++   GC+PN IT+N +I GL ++     A++L+ ++ +
Sbjct: 827  NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS 886

Query: 145  GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            G+      F P   TY  +IDGL K G +++AK+ F +M      PN   Y  L++GF  
Sbjct: 887  GD------FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940

Query: 205  ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
              D   A  L   MV +G++P++ S +++++ LC  GK+D+A    + +    + P+   
Sbjct: 941  QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000

Query: 265  YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
            YN +++G   + ++     LF  M + G   D ++YN LI        VEEA  +Y EL 
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060

Query: 325  FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             KG++P V TYN L  G       +RA  ++ +M       +T T+
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F I +  L +    D    + KR++  G  PD+ TY++LI+  C  G+++    +
Sbjct: 260 PNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKEL 319

Query: 69  FGRILRSC-----------------------------------FAPNVVTFTSLIKGLCA 93
           F ++  S                                    + P+VVTFT LI  LC 
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             ++ EA      +K  G  PN+ TYNTLI GL R      AL LF  M +      +  
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMES------LGL 433

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +    TY + ID   K G   KA + F +MK   + PN+V   + ++         EAK 
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
               +   G+ P+ ++ N++M    K G++D+A +LL  M +    P     N+L+D   
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              +++   ++F  M+ M       +YN L+ G  K   V+EA +L+  +      P  +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           ++NTL   L +  + + ALK+   M   +   D  TY T I GL    +V + +
Sbjct: 614 SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF 667



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 190/448 (42%), Gaps = 77/448 (17%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIG-------------------------- 41
            PP   SFN LL CL KN   D  L +  R+  +                           
Sbjct: 609  PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFW 668

Query: 42   --------LFPDLYTYSILINCFCKMGQVSLGFVI--------------------FGRIL 73
                    ++PD  T   L+    K G++   F +                     G IL
Sbjct: 669  LFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGIL 728

Query: 74   RSC-------FAPNVV---------TFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNV 116
                      FA ++V             L+K LC   + V+A  +F KL K+F   P++
Sbjct: 729  IEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSL 788

Query: 117  ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
              YN+LI+GL +   T +A  LF +M N          P+  TY++ +D L K G + + 
Sbjct: 789  EAYNSLIDGLLKARLTEMAWGLFYKMKNAG------CTPDVFTYNLFLDALGKSGKIKEL 842

Query: 177  KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
             +L+ +M +    PN +T+  +I G   +N  ++A  L  +++     P   +   +++ 
Sbjct: 843  FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902

Query: 237  LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            L K G+++ A +  + M+     PN   YN LM+GF   G +    ELF  M   G + D
Sbjct: 903  LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962

Query: 297  DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              SY+I+++  C   +V++AL  + EL   G+ P +V YN + +GL   ++ E AL LF 
Sbjct: 963  LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022

Query: 357  EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            EM+   +  D  TY   I  L +   V 
Sbjct: 1023 EMRNRGITPDLYTYNALILNLGIAGMVE 1050



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 6/309 (1%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           V+F  + +     ++ T+ ++ K L     + EA     K++  G   N  +Y  LI+ L
Sbjct: 143 VVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLL 202

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            ++G    AL +++ M +         KP+  TYS ++  L K   ++    L  +M+  
Sbjct: 203 LKSGFCREALKVYRRMVSEG------IKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ T+T  I     A   +EA G+L  M D G  P+VV+  V+++ LC  GK++NA
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M     +P+  TY TL+D F   G ++ +KE +  ME+ G   D  ++ ILI+ 
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK  +V+EA    + +  +G+ P + TYNTL  GL  + + + AL+LF  M+   +   
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 367 TCTYRTFID 375
             TY  FID
Sbjct: 437 AYTYILFID 445



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++N L+  L K +  +    LF ++ + G  PD++TY++ ++   K G++   F +
Sbjct: 786  PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  +L     PN +T   +I GL   + + +A  L+  L +    P   TY  LI+GL +
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A   F+EM +     G +  PN   Y+I+++G  K+G V+ A ELF +M  E +
Sbjct: 906  LGRLEEAKQFFEEMLD----YGCM--PNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P++ +Y+ ++   C     ++A     E+   G+ P++V  N+++N L ++ +++ A  
Sbjct: 960  RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L D M    + P+ +TYN L+    + G +    +++  ++  G + + F+YN LI G+ 
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +   + A ++Y ++   G +P   T+  L
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 6/297 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N+ L  L K+     +  L++ +   G  P+  T++I+I    K   +     +
Sbjct: 821  PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  ++   F+P   T+  LI GL    R+ EA   F ++  +GC PN   YN L+NG  +
Sbjct: 881  YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A  LF+ M           +P+  +YSI++D LC  G VD A   F ++K   L
Sbjct: 941  QGDVETACELFRRMVKEG------IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +P++V Y  +I+G   +    EA  L  EM ++G+ P++ + N ++  L   G ++ A +
Sbjct: 995  DPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK 1054

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            + + +    + PN FTYN L+ G  ++G  +R   ++  M   GC+ +  ++  L N
Sbjct: 1055 MYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 9/251 (3%)

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R    +V  NL ++          + K +  TY  I   L   G + +A     +M+   
Sbjct: 137 RVEDMVVVFNLMQKQ---------IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
              N  +Y  LIH    +    EA  +   MV +G++P++ + + +M  L K   ++   
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M    +RPN +T+   +      GKI+    +   M+  GC  D  +Y +LI+  
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   ++  A  L+ ++     KP  VTY TL     +    +   + + EM+ +    D 
Sbjct: 308 CNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDV 367

Query: 368 CTYRTFIDGLC 378
            T+   ID LC
Sbjct: 368 VTFTILIDALC 378


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 80/444 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N ++  L K K  D   S+ +++   G+ PDL+TYS++I+  CK   +     +
Sbjct: 243 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 302

Query: 69  FGRILRSCFAPNVVTFTSL-----IKGLCAES---------------------------- 95
             +++ +   PN +T+ SL     I G+  ES                            
Sbjct: 303 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 362

Query: 96  --RIVEAAALFTKLKAFGCEPNVITYNT-------------------------------- 121
             R  EA  +F  +   G +P++I+Y+T                                
Sbjct: 363 HGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPN 422

Query: 122 ------LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
                 LIN   R G    A+ +F++M N     G++  P+TVT++ +I  LC+ G +D 
Sbjct: 423 KHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDD 476

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIM 234
           A   F  M    + P+   Y  LI G C+  +  +AK L+ EM+++ + P  V   + I+
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 536

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           N LCK G++     ++D+MVQ   RPN  T+N+LM+G+CL G +     L  +M S+G +
Sbjct: 537 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 596

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            + + Y  L++GYCKN  +++AL+++ ++  KG+KPT V Y+ + HGLF+ R+   A K+
Sbjct: 597 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 656

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F EM  +       TY   + GLC
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGLC 680



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 5/345 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           +F  + + G+ P+ + ++ILIN + + G +    +IF  +      P+ VTF ++I  LC
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R+ +A   F  +   G  P+   Y  LI G C  G  + A  L  EM N +     +
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----I 524

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P    +S II+ LCKEG V + K++   M      PNVVT+ SL+ G+C   +  EA 
Sbjct: 525 PPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 584

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL  M   G++PN      +++  CKNG++D+A  +   M+   V+P +  Y+ ++ G 
Sbjct: 585 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 644

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
               +    K++F  M   G      +Y +++ G C+N   +EA  L  +L    +K  +
Sbjct: 645 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 704

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +T+N +   +F++ + + A +LF  +    +  +  TY   I  L
Sbjct: 705 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 749



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 14/386 (3%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           RH   SPP + ++NIL+ C  +    D  L++  RL   GL PD ++YS LI  F K G+
Sbjct: 170 RH---SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 225

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     +F  ++     P ++   S+IK LC    + +A ++  K+   G  P++ TY+ 
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +I+GLC++     A  + ++M     E G   +PN++TY+ +I G    G  +++  +F 
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK-- 239
           QM    + P V    S IH        NEAK +   MV +G +P+++S +   + +C   
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWY 399

Query: 240 -NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
                     + +LM+   + PN   +N L++ +   G +++   +F  M++ G   D  
Sbjct: 400 VTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 459

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           ++  +I+  C+   +++AL  +N +   G+ P+   Y  L  G     +  +A +L  EM
Sbjct: 460 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 519

Query: 359 QGNDVAADTCTY-RTFIDGLCVRPQV 383
              D+      Y  + I+ LC   +V
Sbjct: 520 MNKDIPPPGVKYFSSIINNLCKEGRV 545



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 42/348 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P    FNIL+   A+    D  + +F+ + + G+ PD  T++ +I+  C++G+       
Sbjct: 421 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 480

Query: 62  ----VSLGF----VIFGRILRSCF---------------------APNVVTFTSLIKGLC 92
               V +G      ++G +++ C                       P V  F+S+I  LC
Sbjct: 481 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 540

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
            E R+ E   +   +   G  PNV+T+N+L+ G C  G+   A  L   M +    IG+ 
Sbjct: 541 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI- 595

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +PN   Y  ++DG CK G +D A  +F  M ++ + P  V Y+ ++HG   A     AK
Sbjct: 596 -EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 654

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  EM++ G   ++ +  V++  LC+N   D A+ LL+ +   +V+ +  T+N ++   
Sbjct: 655 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 714

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              G+    KELF ++ + G   +  +Y+++I    K +  EEA +L+
Sbjct: 715 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 762



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 51/322 (15%)

Query: 100 AAALFTKLKAFGCE----PNVITYNTLINGLCRTGHTIVALNLF-KEMTNGNGEIGVVFK 154
           A  LF ++  + C     P + TYN LI+   R     + L +  + + NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+  +YS+I  G  K+G VDKA  LFL+M  + + P ++   S+I   C   + ++A+ +
Sbjct: 209 PDDFSYSLIY-GFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           + +MVD G+ P++ + ++I++ LCK+  MD A R+L+ MV+   RPN+ TYN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           +G  N    +F  M S G      + N  I+   K+    EA  +++ +  KG KP +++
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 335 YNT---------------LFHGLFEIR-----------------------QAERALKLFV 356
           Y+T               ++H +F +                          ++A+ +F 
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
           +MQ   +  DT T+ T I  LC
Sbjct: 448 DMQNKGMIPDTVTFATVISSLC 469



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P +  +S +IN  CK G+V+ G  I   ++++   PNVVTF SL++G C    + EA AL
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              + + G EPN   Y TL++G C+ G    AL +F++M +         KP +V YSII
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG------VKPTSVLYSII 640

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GL +      AK++F +M       ++ TY  ++ G C  N  +EA  LL ++    V
Sbjct: 641 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 700

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + ++++ N++++ + K G+   A  L D +    + PN  TY+ ++              
Sbjct: 701 KFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADN 760

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           LF+S+E  G   D    N ++       EV +A
Sbjct: 761 LFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 793



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 10/271 (3%)

Query: 9   PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P V +FN L+   CL  N   +   +L   + SIG+ P+ Y Y  L++ +CK G++    
Sbjct: 562 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 619

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  +L     P  V ++ ++ GL    R   A  +F ++   G   ++ TY  ++ GL
Sbjct: 620 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 679

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR   T  A  L +++   N       K + +T++I+I  + K G   +AKELF  +   
Sbjct: 680 CRNNCTDEANMLLEKLFAMN------VKFDIITFNIVISAMFKVGRRQEAKELFDAISTY 733

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+ TY+ +I        + EA  L I +   G   +    N I+  L    ++  A
Sbjct: 734 GLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 793

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           S  L ++ + ++   A T + L   F   GK
Sbjct: 794 SNYLSIIGENNLTLEASTISLLASLFSREGK 824


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 181/335 (54%), Gaps = 9/335 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+  L        V++LF+R     ++ PD+++++++I   C++GQV     +  R
Sbjct: 217 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 276

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTG 130
           +     +P+ VT   L+ GLC  + +     +  +L+  G C PNV+T+ ++I+G C+ G
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ ++ +M            PNTVTY+++I+G  K G +  A E++ QM      P
Sbjct: 337 KLEDAMAVYNDMVASG------IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 390

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT++SLI G+C     ++A  +  +M    +QPNV + ++I++ LCK  + D A  LL
Sbjct: 391 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLL 450

Query: 251 -DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +L ++ D+ P AF YN ++D  C  GK++    +   ME  GC+ D ++Y ILI GYC 
Sbjct: 451 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCM 510

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              + EA+  ++E+   G  P  +T N     L +
Sbjct: 511 KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 545



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + +       L L +R+N  G  PD  T++IL++  C+  +VS G  +
Sbjct: 249 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 308

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             R+ R   C  PNVVTFTS+I G C   ++ +A A++  + A G  PN +TYN LING 
Sbjct: 309 LRRLQRDGVCM-PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 367

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A+ ++++MT       +   P+ VT+S +IDG C+ G +D A  ++  M   
Sbjct: 368 GKVGDLGSAVEVYQQMTR------LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 421

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDN 245
            + PNV T++ +IH  C  N  +EA GLL E+ +   + P     N +++ LCK GK+D 
Sbjct: 422 RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 481

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +   M +   RP+ +TY  L+ G+C+  +I+     F  M   GC  D  + N  I+
Sbjct: 482 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 541



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 172/355 (48%), Gaps = 13/355 (3%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTS 86
           D   +L  + +  G   + Y Y+ L++     G+V     +F R ++   ++P+V +F  
Sbjct: 197 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 256

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +IKG+C   ++ +A  L  ++  FGC P+ +T+N L++GLCRT        + + +    
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                V  PN VT++ +I G CK G ++ A  ++  M    + PN VTY  LI+G+    
Sbjct: 317 -----VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVG 371

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D   A  +  +M      P+VV+ + +++  C+ G++D+A R+   M Q  ++PN +T++
Sbjct: 372 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 431

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHD----DFSYNILINGYCKNKEVEEALSLYNE 322
            ++   C   K NR  E    +  +  + D     F YN +I+  CK  +V+EA  +   
Sbjct: 432 IIIHSLC---KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 488

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  KG +P   TY  L  G     +   A+  F EM     + D+ T   FI  L
Sbjct: 489 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL 543



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 4   MHPSP----PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCK 58
           +H SP    P   S   ++  L ++      L LF ++ +  G  PD    S L++    
Sbjct: 133 LHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTC 192

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVI 117
              +     +  +            +  L+  L    R+ +  ALF + ++     P+V 
Sbjct: 193 ANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVW 252

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++N +I G+CR G    AL L + M     E G    P+TVT++I++DGLC+   V +  
Sbjct: 253 SFNVVIKGVCRVGQVQKALELVERMN----EFGC--SPDTVTHNILVDGLCRTNEVSRGH 306

Query: 178 ELFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           E+  +++ + +  PNVVT+TS+I G+C A    +A  +  +MV  G+ PN V+ NV++N 
Sbjct: 307 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 366

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
             K G + +A  +   M +    P+  T+++L+DG+C  G+++    ++  M     + +
Sbjct: 367 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 426

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            ++++I+I+  CK    +EA+ L NEL  +  I P    YN +   L +  + + A  + 
Sbjct: 427 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 486

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             M+      D  TY   I G C++ ++
Sbjct: 487 KGMEEKGCRPDKYTYTILIIGYCMKSRI 514


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 186/407 (45%), Gaps = 47/407 (11%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P  V ++N L+    +    D    L   + S+ + PD YTY+ LI   C  G+V    
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +LR    P+VVT+T L++ +C  S   +A  +  +++A GC PN++TYN +ING+
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGM 217

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR      A  +   +++        F+P+TV+Y+ ++ GLC     +  + LF +M   
Sbjct: 218 CREDRVDDARQILNRLSSYG------FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN 271

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N  PN VT+  L+  FC       A  +L  M + G   N    N+++N +CK G++D+A
Sbjct: 272 NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDA 331

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM------------------ 288
              L+ M      P+  +Y T++ G C  G+    KEL   M                  
Sbjct: 332 FEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICI 391

Query: 289 --------------ESM---GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
                         E M   GC     +YN L+NG+C    V+ AL L+N LP    +P 
Sbjct: 392 LCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPN 448

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +TY TL  GL    + + A +L  EM  ND   +  T+   +   C
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 186/369 (50%), Gaps = 9/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F++L+    +    +  + +  R++  G   +    +I+IN  CK G+V   F  
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEF 334

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P+ +++T+++KGLC   R  +A  L  ++    C PN +T+NT I  LC+
Sbjct: 335 LNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQ 394

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L ++M      +G+V      TY+ +++G C +G VD A ELF  +  E  
Sbjct: 395 KGLIDQAILLIEQMPEYGCSVGIV------TYNALVNGFCVQGRVDSALELFNSLPCE-- 446

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TYT+L+ G CHA   + A  LL EM+      NVV+ NV+++  C+ G ++ A  
Sbjct: 447 -PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M++    PN  T+NTL+DG           EL   + S G   D  +Y+ +++   
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   +EEA+ +++ +   G++P  V YN +   L +  + +RA+  F  M  N    +  
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625

Query: 369 TYRTFIDGL 377
           TY   I+GL
Sbjct: 626 TYVILIEGL 634



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 193/433 (44%), Gaps = 61/433 (14%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP   ++  L+  L         LSL   +      P + TY++L+   CK       
Sbjct: 132 PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN+VT+  +I G+C E R+ +A  +  +L ++G +P+ ++Y T++ G
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG 251

Query: 126 LCRTGHTIVALNLFKEMTNGN---GEI------------GVVFK--------------PN 156
           LC          LF EM   N    E+            G+V +               N
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           T   +I+I+ +CK+G VD A E    M     +P+ ++YT+++ G C A  W +AK LL 
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLN 371

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ--CDV---------------- 258
           EMV +   PN V+ N  +  LC+ G +D A  L++ M +  C V                
Sbjct: 372 EMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG 431

Query: 259 --------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                          PN  TY TL+ G C   +++   EL   M    C  +  ++N+L+
Sbjct: 432 RVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLV 491

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + +C+   VEEA+ L  ++   G  P ++T+NTL  G+ E   +E AL+L   +    ++
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551

Query: 365 ADTCTYRTFIDGL 377
            DT TY + +D L
Sbjct: 552 LDTITYSSIVDVL 564



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 172/339 (50%), Gaps = 9/339 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D++ Y+ L+  +C+ G++     +   +      P+  T+T LI+GLC   R+ +A +L 
Sbjct: 104 DVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             +    C+P+V+TY  L+  +C++     A+ +  EM            PN VTY++II
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG------CTPNIVTYNVII 214

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G+C+E  VD A+++  ++      P+ V+YT+++ G C A  W + + L  EMV+    
Sbjct: 215 NGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV 274

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+ ++++   C+ G ++ A  +LD M +     N    N +++  C  G+++   E 
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEF 334

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             +M S GC  D  SY  ++ G C+    E+A  L NE+  K   P  VT+NT    L +
Sbjct: 335 LNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQ 394

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               ++A+ L  +M     +    TY   ++G CV+ +V
Sbjct: 395 KGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRV 433



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  +L  L   K ++ V  LF  +      P+  T+ +L+  FC+ G V     +
Sbjct: 240 PDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEV 299

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+       N      +I  +C + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 300 LDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR 359

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM   N        PN VT++  I  LC++G +D+A  L  QM     
Sbjct: 360 AGRWEDAKELLNEMVRKN------CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGC 413

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +  +VTY +L++GFC     + A  L   +     +PN ++   ++  LC   ++D A+ 
Sbjct: 414 SVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAE 470

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+Q D   N  T+N L+  FC  G +    EL   M   GC  +  ++N L++G  
Sbjct: 471 LLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGIT 530

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++   EEAL L + L  KGI    +TY+++   L    + E A+++F  +Q   +     
Sbjct: 531 EDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAV 590

Query: 369 TYRTFIDGLCVR 380
            Y   +  LC R
Sbjct: 591 MYNKILSALCKR 602



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 148/336 (44%), Gaps = 44/336 (13%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
           AP+V   T LI+ LC   R  +AA +    +  G   +V  YNTL+ G CR G    A  
Sbjct: 67  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           L   M            P+  TY+ +I GLC  G V  A  L   M      P+VVTYT 
Sbjct: 127 LIASMP---------VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTV 177

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C ++ + +A  +L EM  +G  PN+V+ NVI+N +C+  ++D+A ++L+ +    
Sbjct: 178 LLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG 237

Query: 258 VRPNAFTYNTLMDG-----------------------------------FCLTGKINRVK 282
            +P+  +Y T++ G                                   FC  G + R  
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E+   M   GC  +    NI+IN  CK   V++A    N +   G  P  ++Y T+  GL
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               + E A +L  EM   +   +  T+ TFI  LC
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILC 393



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 44/349 (12%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI++  + K    D        + S G  PD  +Y+ ++   C+ G+      +   ++R
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN VTF + I  LC +  I +A  L  ++  +GC   ++TYN L+NG C  G    
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC-------------------------- 168
           AL LF  +           +PNT+TY+ ++ GLC                          
Sbjct: 436 ALELFNSLP---------CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486

Query: 169 ---------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
                    ++GFV++A EL  QM      PN++T+ +L+ G     +  EA  LL  +V
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV 546

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+  + ++ + I++ L +  +++ A ++   +    +RP A  YN ++   C   + +
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETD 606

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           R  + F  M S  C  ++ +Y ILI G  +   ++EA  + +EL  +G+
Sbjct: 607 RAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%)

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           +S +      +D  EA  L+     +G  P+V     ++  LC+ G+  +A+R+L     
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
                + F YNTL+ G+C  G+++  + L  SM       D ++Y  LI G C    V +
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGD 155

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           ALSL +++  +  +P+VVTY  L   + +     +A+K+  EM+      +  TY   I+
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 376 GLCVRPQV 383
           G+C   +V
Sbjct: 216 GMCREDRV 223



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 6/218 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++  LL  L   +  D    L   +       ++ T+++L++ FC+ G V   
Sbjct: 444 PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  +++     PN++TF +L+ G+  +    EA  L   L + G   + ITY+++++ 
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L R      A+ +F  + +      +  +P  V Y+ I+  LCK    D+A + F  M  
Sbjct: 564 LSREDRIEEAVQMFHAVQD------MGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVS 617

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            +  PN  TY  LI G        EA+ +L E+  +GV
Sbjct: 618 NSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+  SS   +  L     +  A+RL++        P+ +    L+   C  G+ +    +
Sbjct: 35  PSPASSR--LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARV 92

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             + E  G   D F+YN L+ GYC+   ++ A  L   +P   + P   TY  L  GL +
Sbjct: 93  LRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCD 149

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +   AL L  +M   +      TY   ++ +C
Sbjct: 150 RGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + +FN LL  + ++ + +  L L   L S G+  D  TYS +++   +  ++  
Sbjct: 513 HGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEE 572

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  +      P  V +  ++  LC       A   F  + +  C PN  TY  LI 
Sbjct: 573 AVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIE 632

Query: 125 GLCRTG 130
           GL R G
Sbjct: 633 GLAREG 638


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    PSP  V+ + +L+    KN +      L+ ++ +  + P ++  + LI  F K+ 
Sbjct: 375 MNENGPSPNRVT-YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVE 433

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
                  +F   + +C   N+ T+ SL+  LC E ++ EA  L+ K+   G  P  ++YN
Sbjct: 434 SREEASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYN 492

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           ++I G CR G+  +A ++F +M      +    KPN +TYSI++DG  K G  + A  +F
Sbjct: 493 SMILGHCRQGNLDMAASVFSDM------LDCGLKPNVITYSILMDGYFKNGDTEYAFYVF 546

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  EN+ P+  TY   I+G C     +EA+ +L + V++G  P  ++ N IM+   K 
Sbjct: 547 DRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKE 606

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G + +A      M +  V PN  TY TL++GFC     +   ++   M + G + D  +Y
Sbjct: 607 GSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAY 666

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             LI+G+CK +++E A  L++EL   G+ P  V YN+L  G   +   E AL L   M G
Sbjct: 667 GALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLG 726

Query: 361 NDVAADTCTYRTFIDGL 377
             ++ D  TY T IDGL
Sbjct: 727 EGISCDLQTYTTLIDGL 743



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 28/402 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            ++++I++    KN   +    L K +   G  P   T++ +I    K G +     +  
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++      NVV  T+L+KG C + ++V A   F K+   G  PN +TY  LI   C+ G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398

Query: 131 HTIVALNLFKEMTNGN---------------------GEIGVVFK-------PNTVTYSI 162
           +   A +L+ +M N N                      E   +F         N  TY+ 
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNS 458

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++  LCKEG + +A  L+ +M  + L P  V+Y S+I G C   + + A  +  +M+D G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++PNV++ +++M+   KNG  + A  + D MV  ++ P+ FTYN  ++G C  G+ +  +
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++       G      +YN +++G+ K   V  AL+ Y E+   G+ P V+TY TL +G 
Sbjct: 579 DMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGF 638

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +    + ALK+  EM+   +  D   Y   IDG C +  + 
Sbjct: 639 CKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 184/400 (46%), Gaps = 40/400 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + +I++    K+ + +     F    S G+  D   YSI+I  FCK   V L   +   +
Sbjct: 246 TVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDM 305

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
               + P+  TFTS+I     +  +VEA  L  ++ + G + NV+   TL+ G C+    
Sbjct: 306 RDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKL 365

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP-- 190
           + AL  F +M N NG       PN VTY+++I+  CK G + KA +L+ QMK +N+ P  
Sbjct: 366 VSALEFFDKM-NENGP-----SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 191 --------------------------------NVVTYTSLIHGFCHANDWNEAKGLLIEM 218
                                           N+ TY SL+   C     +EA  L  +M
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM 479

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D+G+ P  VS N ++   C+ G +D A+ +   M+ C ++PN  TY+ LMDG+   G  
Sbjct: 480 LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDT 539

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
                +F  M        DF+YNI ING CK     EA  +  +   KG  P  +TYN++
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             G  +      AL  + EM  + V+ +  TY T I+G C
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 182/374 (48%), Gaps = 15/374 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +P  VS  +++LG   +  + D   S+F  +   GL P++ TYSIL++ + K G     F
Sbjct: 485 APTKVSYNSMILGH-CRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F R++     P+  T+   I GLC   R  EA  +  K    G  P  +TYN++++G 
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    AL  ++EM     E GV   PN +TY+ +I+G CK    D A ++  +M+ +
Sbjct: 604 IKEGSVSSALTAYREMC----ESGV--SPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  ++  Y +LI GFC   D   A  L  E++D G+ PN V  N +++       M+ A
Sbjct: 658 GLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAA 717

Query: 247 ----SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
                R+L   + CD++    TY TL+DG    G++    +L+  M + G   D   Y +
Sbjct: 718 LNLQKRMLGEGISCDLQ----TYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTV 773

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LING C   ++E A  +  E+    I P V  YN L  G F+    + A +L  EM    
Sbjct: 774 LINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKG 833

Query: 363 VAADTCTYRTFIDG 376
           +  +  TY   I+G
Sbjct: 834 LTPNDTTYDILING 847



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL  L K        +L++++   GL P   +Y+ +I   C+ G + +   +F  +
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L     PNV+T++ L+ G         A  +F ++      P+  TYN  INGLC+ G T
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A ++ K+      E G  F P  +TY+ I+DG  KEG V  A   + +M    ++PNV
Sbjct: 575 SEAQDMLKKFV----EKG--FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TYT+LI+GFC  N+ + A  +  EM ++G++ ++ +   +++  CK   ++ AS L   
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           ++   + PN+  YN+L+ G+     +     L   M   G   D  +Y  LI+G  K   
Sbjct: 689 LLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGR 748

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  AL LY+E+  KGI P ++ Y  L +GL    Q E A K+  EM+ + +  +   Y  
Sbjct: 749 LVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNA 808

Query: 373 FIDG 376
            I G
Sbjct: 809 LIAG 812



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           +++TY+ L++  CK G++S    ++ ++L    AP  V++ S+I G C +  +  AA++F
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
           + +   G +PNVITY+ L++G  + G T  A  +F  M + N        P+  TY+I I
Sbjct: 512 SDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN------IVPSDFTYNIKI 565

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +GLCK G   +A+++  +   +   P  +TY S++ GF      + A     EM + GV 
Sbjct: 566 NGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVS 625

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PNV++   ++N  CKN   D A ++ + M    +  +   Y  L+DGFC    I     L
Sbjct: 626 PNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL 685

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  +   G   +   YN LI+GY     +E AL+L   +  +GI   + TY TL  GL +
Sbjct: 686 FSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLK 745

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +   AL L+ EM    +  D   Y   I+GLC + Q+ 
Sbjct: 746 EGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 43/348 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++IL+    KN   +    +F R+    + P  +TY+I IN  CK+G+ S    +
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDM 580

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             + +   F P  +T+ S++ G   E  +  A   + ++   G  PNVITY TLING C+
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +T +AL +  EM N   E+ +        Y  +IDG CK+  ++ A  LF ++    L
Sbjct: 641 NNNTDLALKMRNEMRNKGLELDIA------AYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 189 NPNVVTYTSLIHGFCHANDWNEA----------------------------KGLLI---- 216
           +PN V Y SLI G+ + N+   A                            +G L+    
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 217 ---EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              EM  +G+ P+++   V++N LC  G+++NA ++L  M +  + PN   YN L+ G  
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK--NKEVEEALSL 319
             G +     L   M   G   +D +Y+ILING  K  N  ++  LSL
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSL 862



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 161/398 (40%), Gaps = 65/398 (16%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+  Y+ L+N + K  +++     F R++ S   P +     L+  L     I EA  ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 105 TKL-----------------------------------KAFGCEPNVITYNTLINGLCRT 129
            K+                                   K+ G + +   Y+ +I   C+ 
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292

Query: 130 GHTIVALNLFKEMTNG---------NGEIGVVFKP--------------------NTVTY 160
               +A  L K+M +             IG   K                     N V  
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + ++ G CK+  +  A E F +M     +PN VTY  LI   C   +  +A  L  +M +
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           + + P V   N ++    K    + AS+L D  V CD+  N FTYN+L+   C  GK++ 
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSE 471

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L+  M   G      SYN +I G+C+   ++ A S+++++   G+KP V+TY+ L  
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMD 531

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G F+    E A  +F  M   ++     TY   I+GLC
Sbjct: 532 GYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++  L+  L K       L L+  +++ G+ PD+  Y++LIN  C  GQ+     I  
Sbjct: 733 LQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILA 792

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + R    PNV  + +LI G      + EA  L  ++   G  PN  TY+ LING  + G
Sbjct: 793 EMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852

Query: 131 HTIVALNLFKEMTNGNG 147
           ++ +   L  +  +G G
Sbjct: 853 NSALKSLLSLKFKDGKG 869


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 64/438 (14%)

Query: 1   MRHMHP-SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           +R   P  PPP+S +N+L  C  K    D V+ L+K +    + P  YT+++LI+  C+M
Sbjct: 107 LRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEM 166

Query: 60  G--------------------QVSLGFVIFGRI--------------LRSCFA-PNVVTF 84
           G                    + SLG ++ G                +RS  A PN V +
Sbjct: 167 GYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAY 226

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            ++I  LC E + VEA  L  K++  G  P+++T+N  I  LC++G  + A  +F++M  
Sbjct: 227 NTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI 286

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YENLNPNVVTYTSLIHGFC 203
            + E+G+  KPNTVTY+++++G C EG  ++A+ +F  MK  E L  ++ +Y   + G  
Sbjct: 287 -DEEMGLP-KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLGLV 342

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            +    EA  +L EM ++ ++PN+ S N++++ LCK G   +A  +L LM +  V P+  
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TY+TL+ G+C  GKI     +   M  +GC  + ++ NIL++   K     EA  L   +
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKL------------------FVEM-----QG 360
             +G     VT NT+ +GL +    ++A+++                  F+++      G
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 361 NDVAADTCTYRTFIDGLC 378
                D+ TY T I GLC
Sbjct: 523 KKCLPDSITYATIIGGLC 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 183/407 (44%), Gaps = 34/407 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L           L +++  +GL PD+ T++  I   CK GQ+     I
Sbjct: 221 PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRI 280

Query: 69  FGRIL----RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           F  +          PN VT+  +++G C+E    EA A+F  +K      ++ +YN  + 
Sbjct: 281 FRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN-SETLSLRSYNIWML 339

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R+G  + A  +  EM   N       KPN  +Y+I++ GLCK G    A+ +   M+
Sbjct: 340 GLVRSGKLLEAHLILNEMAEKN------IKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+ VTY++L+HG+C      EA  +L EM+  G  PN+ + N++++ L K G+  
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG------------ 292
            A  LL +M +     +  T NT+++G C  G +++  E+   M + G            
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 293 -----------CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                      C  D  +Y  +I G CK   V+EA     E+  K + P  + ++T  + 
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             +  +   A ++  EM+         TY + I GL    Q+   Y 
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 189/425 (44%), Gaps = 55/425 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV-SLGFV 67
           P + S+NIL+  L K   +    S+   +   G+ PD  TYS L++ +C+ G++    +V
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   I   CF PN+ T   L+  L  E R  EA  L   +   G   + +T NT+INGLC
Sbjct: 424 LREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVFK----------------PNTVTYSIIIDGLCKE 170
           + G+   A+ +   M T G+  +G +                  P+++TY+ II GLCK 
Sbjct: 483 KAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKV 542

Query: 171 GFVDKAKELFLQMKYENLNPNVV-----------------------------------TY 195
           G VD+AK+  L+M  + L+P+ +                                   TY
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            SLI G    N   E  GL+ EM ++G+ PNV + N I++ L + GK+ +A+ LLD M+Q
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ 662

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + PN +T+  L+  F         +ELF    S+ C H +  Y+ + N      E  +
Sbjct: 663 KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLK 721

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L+     + +      Y  L   L +  + + A  +  +M     + D  ++   ID
Sbjct: 722 AKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 781

Query: 376 GLCVR 380
            L  R
Sbjct: 782 ELGKR 786



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 46/338 (13%)

Query: 86  SLIKGLCAESRIVEAAALFTKLK-AFGCEPNVIT-YNTLINGLCRTGHTIVALNLFKEMT 143
           SL++ L     +  A + F  L+  F  +P  I+ YN L     +       + L+K+M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                     KP T T++++I  LC+ G+++ A+E+F +M  +   PN  +   L+ G+C
Sbjct: 146 VAK------VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   +    LL EM   G  PN V+ N +++ LC  G+   A +L++ M +  + P+  
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 264 TYNTLMDGFCLTGKINRVKELFVSM---ESMGC-KHDDFSYNILINGYCKNKEVEEALSL 319
           T+N  +   C +G+I     +F  M   E MG  K +  +YN+++ G+C     EEA ++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 320 Y----------------------------------NELPFKGIKPTVVTYNTLFHGLFEI 345
           +                                  NE+  K IKP + +YN L HGL + 
Sbjct: 320 FDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKY 379

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                A  +   M+ + VA DT TY T + G C R ++
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 7/288 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++G L K    D        +    L PD   +   I  +CK G++S  F +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     ++ T+ SLI+GL +E++I E   L  ++K  G  PNV TYN +I+ L  
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM            PN  T+ I+I    K      A+ELF ++     
Sbjct: 647 GGKLKDATCLLDEMLQKG------ISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLC 699

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                 Y+ + +      +  +AK L    +D+ +         ++ +LCK+GK+D+AS 
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +L  M+      +  ++  ++D     G  +   E    M  M  + D
Sbjct: 760 ILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 187/405 (46%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   LL  L K    +    +F+ +   G+ PD+Y +S  IN FCK G+V     +
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   +PNVVT+ +LI GLC    + EA     K+   G    +ITY+ LINGL +
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ KE           F PN V Y+ +IDG CK G +  A  +   M  + +
Sbjct: 396 LEKFNEANSVLKETLEKG------FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NPN VT  S+I GFC      +A+ +L EM+ +G   N  +   I++ LC N + ++A R
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 249 LLDLMVQCDVRPNA-----------------------------------FTYNTLMDGFC 273
            L  M+  ++RPN                                     T N L+ G C
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            TG +     L   M   G   D  +YN LI+G CK  +VEE   L  E+  +GI+P   
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN L HG+  I + + A+ L+ E +  D+  +  TY   IDG C
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F  ++  L  N  +++ L   + +    + P+    + L+   CK G+ S    ++ R+
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L   F  N+VT  +LI GLC    + EA  L  K+   G   + ITYNTLI+G C+ G  
Sbjct: 550 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 609

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                L  EM     E      P+T TY+++I G+C+ G +D+A  L+ + K  +L PNV
Sbjct: 610 EEGFKLRGEMVKQGIE------PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 663

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY  +I G+C A+   E + L  E++ Q ++ N V  N ++   C+NG    A +L D 
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P   TY++L+ G C  G++   K L   M   G   +   Y  LI GYCK  +
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +++ +++  E+    I P  +TY  +  G  +    + A KL  EM G  +  DT TY  
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843

Query: 373 FIDGLC 378
             +G C
Sbjct: 844 LTNGFC 849



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 189/401 (47%), Gaps = 41/401 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++++L+  L K + ++   S+ K     G  P+   Y+ LI+ +CKMG +     I G +
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN VT  S+I+G C   ++ +A  +  ++ + G   N   + T+I+ LC     
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 504

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL   +EM   N       +PN    + ++ GLCKEG    A EL+ ++  +    N+
Sbjct: 505 ESALRFLREMLLRN------MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 193 VTYTSLIHGFCHANDWNEAKGLLI-----------------------------------E 217
           VT  +LIHG C   +  EA  LL                                    E
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV QG++P+  + N++++ +C+ GK+D A  L +     D+ PN +TY  ++DG+C   K
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           I   ++LF  + +   + +   YN LI  YC+N    EA  L++++  KGI PT  TY++
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L HG+  I + E A  L  EM+   +  +   Y   I G C
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 779



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N L+  L K  +    + L K++   G   D  TY+ LI+  CK G+V  GF + G +++
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+  T+  LI G+C   ++ EA  L+ + K+    PNV TY  +I+G C+      
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              LF E+   N E+      N+V Y+ +I   C+ G   +A +L   M+ + + P   T
Sbjct: 682 GEKLFTELLTQNLEL------NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 735

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y+SLIHG C+     +AK L+ EM  +G+ PNVV    ++   CK G+MD    +L  M 
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
             D+ PN  TY  ++DG+  +G +    +L   M   G   D  +YN+L NG+CK  ++E
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855

Query: 315 EA 316
           E 
Sbjct: 856 EG 857



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 140/272 (51%), Gaps = 6/272 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+    K    +    L   +   G+ PD +TY++LI+  C++G++     ++   
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PNV T+  +I G C   +I E   LFT+L     E N + YNTLI   CR G+T
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A  L  +M +          P T TYS +I G+C  G ++ AK L  +M+ E L PNV
Sbjct: 715 VEAFKLHDDMRSKG------IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V YT+LI G+C     ++   +L EM    + PN ++  V+++   K+G M  A++LL  
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           MV   + P+  TYN L +GFC  GKI   K L
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL 860



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 125/243 (51%), Gaps = 6/243 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+  + +    D  ++L+    S  L P++YTY ++I+ +CK  ++  G  +
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L      N V + +LI+  C     VEA  L   +++ G  P   TY++LI+G+C 
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM            PN V Y+ +I G CK G +DK   +  +M   ++
Sbjct: 746 IGRMEDAKCLIDEMRKEG------LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN +TYT +I G+  + D   A  LL EMV +G+ P+ V+ NV+ N  CK GK++    
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859

Query: 249 LLD 251
           L +
Sbjct: 860 LAE 862



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 58/123 (47%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP  ++++ L+  +      +    L   +   GL P++  Y+ LI  +CK+GQ+     
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 789

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      PN +T+T +I G      +  AA L  ++   G  P+ +TYN L NG C
Sbjct: 790 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849

Query: 128 RTG 130
           + G
Sbjct: 850 KEG 852


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +LI G      + +   L T + A G  P+V T   LIN
Sbjct: 155 AQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDEANELFNEMLDK----GLV--PNGVTFTTLIDGHCKSGRVDLALEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  +P+++TY +LI+G C   D  +A+ L++EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 RQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L   M++  +R +   Y  L+ G C  G+    +++   M S+G K ++ +Y ++I
Sbjct: 329 TAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           NG+CK  +V+ A  L  E+   G  P VVT
Sbjct: 389 NGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +   G  P+V+
Sbjct: 113 KLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTLING  R G       L K   + +G       P+  T +++I+GLCKE  +D+A 
Sbjct: 173 SFNTLINGYIRLGDLDKGFRL-KTAMHASG-----VHPDVYTNTVLINGLCKESKMDEAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C +   + A  +  +M+ QG  P++++ N ++  L
Sbjct: 227 ELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C+ G +  A  L+  M    ++P+  TY TL+DG C  G +    EL   M     + DD
Sbjct: 287 CRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +G  +    + A KL  E
Sbjct: 347 VAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      F    +  F     T   +++ L            +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+++ +I
Sbjct: 125 KEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCG------LRPSVVSFNTLI 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +DK   L   M    ++P+V T T LI+G C  +  +EA  L  EM+D+G+ 
Sbjct: 179 NGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CK+G++D A  +   M++    P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
            V M   G K D  +Y  LI+G CK  ++E A  L   +  + I+   V Y  L  GL +
Sbjct: 299 IVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +A  A K+  EM    +  +  TY   I+G C +  V+
Sbjct: 359 EGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVK 398



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N ++N   + G +D   RL   M    
Sbjct: 142 LMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ +T   L++G C   K++   ELF  M   G   +  ++  LI+G+CK+  V+ AL
Sbjct: 202 VHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAL 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  +G  P ++TYNTL +GL      ++A  L VEM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFELRK 335


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 197/374 (52%), Gaps = 6/374 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +    +    L   L   G  P++  Y+ LI+  CK G++     +F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +     N  T+T LI GL       +   ++ K++  G  PN+ TYN ++N LC+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDG 282

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T  A  +F EM     E GV    N VTY+ +I GLC+E   ++A ++  QMK   +NP
Sbjct: 283 RTKDAFKVFDEMR----ERGV--SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY +LI GFC      +A  L  ++  +G+ P++V+ NV+++  C+ G    A++++
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMV 396

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  ++P+  TY  L+D F  +  +    +L  SME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++ EA  L+  +  K ++P  V YNT+  G  +   + RAL+LF +M+  ++A +  +Y
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASY 516

Query: 371 RTFIDGLCVRPQVR 384
              I  LC   +++
Sbjct: 517 SYLIRVLCKERKLK 530



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 190/370 (51%), Gaps = 9/370 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R    SP  V    ++ GC  K +  +    LF  +   GL  + +TY++LI+   K G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               GF ++ ++      PN+ T+  ++  LC + R  +A  +F +++  G   N++TYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLCR      A  +  +M +       V  PN +TY+ +IDG C  G + KA  L 
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKS------YVINPNLITYNTLIDGFCSVGKLGKALSLC 361

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             +K   L+P++VTY  L+ GFC   D + A  ++ EM ++G++P+ V+  ++++   ++
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             M+ A +L   M +  + P+  TY+ L+ GFC+ G++N    LF SM     + ++  Y
Sbjct: 422 DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIY 481

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-- 358
           N +I GYCK      AL L+ ++  K + P V +Y+ L   L + R+ + A  L  +M  
Sbjct: 482 NTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMID 541

Query: 359 QGNDVAADTC 368
            G D +   C
Sbjct: 542 SGIDPSDTIC 551



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 23/378 (6%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + +++    +++  D+ +  F  +   G  P         NCF  +    +G   F +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-------SNCFNNLLTFVVGSSSFNQWW 149

Query: 74  RSCF--------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             CF          +V +F  +IKG C    I ++  L  +L+ FG  PNV+ Y TLI+G
Sbjct: 150 --CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A +LF EM    G+ G+V   N  TY+++I GL K G   +  E++ +M+ 
Sbjct: 208 CCKKGEIEKAKDLFFEM----GKFGLV--ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE 261

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + PN+ TY  +++  C      +A  +  EM ++GV  N+V+ N ++  LC+  K + 
Sbjct: 262 HGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANE 321

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A++++D M    + PN  TYNTL+DGFC  GK+ +   L   ++S G      +YN+L++
Sbjct: 322 ANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVS 381

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C+  +   A  +  E+  +GIKP+ VTY  L          E A++L   M+   +  
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVP 441

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D  TY   I G C++ Q+
Sbjct: 442 DVHTYSVLIHGFCIKGQM 459



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 34/250 (13%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G  +  F   +  L    + E        Y  +I+ +  +   + +     EMVD+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 223 VQP----------------------------------NVVSSNVIMNELCKNGKMDNASR 248
             P                                  +V S  +++   C+ G+++ +  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  + +    PN   Y TL+DG C  G+I + K+LF  M   G   ++++Y +LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN   ++   +Y ++   G+ P + TYN + + L +  + + A K+F EM+   V+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 369 TYRTFIDGLC 378
           TY T I GLC
Sbjct: 305 TYNTLIGGLC 314


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 193/366 (52%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+    +    D    L + + S G  P L TY+ ++   CK G+VS    +   +
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P++V++ +LI G      I EA  LF +L+  G  P+V+TYNTLI+GLCR G  
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            VA+ L  EM     +      P+  T++I++ G CK G +  AKELF +M    L P+ 
Sbjct: 382 DVAMRLKDEMIKHGPD------PDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y + I G     D ++A G+  EM+ +G  P++++ NV ++ L K G +  AS L+  
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   + P+  TY +++    + G + + + +F+ M S G      +Y +LI+ Y     
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A+  + E+  KG+ P V+TYN L +GL ++R+ ++A K F EMQ   ++ +  TY  
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 373 FIDGLC 378
            I+  C
Sbjct: 616 LINENC 621



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 185/362 (51%), Gaps = 6/362 (1%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           ++   D    ++  +   G+ P + TY+ +++ FCK G+V     +  ++ +    PN V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           T+  L+ GL     + +A  L  ++   G E +  TY+ LI G C  G    A  L +EM
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            +     G V  P  VTY+ I+ GLCK G V  A++L   M  +NL P++V+Y +LI+G+
Sbjct: 287 LSR----GAV--PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 340

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
               +  EA  L  E+  +G+ P+VV+ N +++ LC+ G +D A RL D M++    P+ 
Sbjct: 341 TRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDV 400

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
           FT+  L+ GFC  G +   KELF  M + G + D F+Y   I G  K  +  +A  +  E
Sbjct: 401 FTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 460

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  +G  P ++TYN    GL ++   + A +L  +M  N +  D  TY + I    +   
Sbjct: 461 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520

Query: 383 VR 384
           +R
Sbjct: 521 LR 522



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 182/378 (48%), Gaps = 6/378 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L    K       L L  ++  +G  P+  TY++L+N     G++     +
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR     +  T+  LI+G C + ++ EA+ L  ++ + G  P ++TYNT++ GLC+
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   M N N        P+ V+Y+ +I G  + G + +A  LF ++++  L
Sbjct: 308 WGRVSDARKLLDVMVNKN------LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL 361

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G C   D + A  L  EM+  G  P+V +  +++   CK G +  A  
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P+ F Y T + G    G  ++   +   M + G   D  +YN+ I+G  
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L  ++ + G+ P  VTY ++ H         +A  +F+EM    +     
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541

Query: 369 TYRTFIDGLCVRPQVRFT 386
           TY   I    VR +++  
Sbjct: 542 TYTVLIHSYAVRGRLKLA 559



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 29/363 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K         L   + +  L PDL +Y+ LI  + ++G +   F++
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+VVT+ +LI GLC    +  A  L  ++   G +P+V T+  L+ G C+
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412

Query: 129 TGHTIVALNLFKEMTNGN-------------GEIGVV----------------FKPNTVT 159
            G+  +A  LF EM N               GE+ +                 F P+ +T
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++ IDGL K G + +A EL  +M Y  L P+ VTYTS+IH    A    +A+ + +EM+
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+VV+  V+++     G++  A      M +  V PN  TYN L++G C   K++
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +  + F  M++ G   + ++Y ILIN  C     +EAL LY ++  + I+P   T++ L 
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652

Query: 340 HGL 342
             L
Sbjct: 653 KHL 655



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 7/322 (2%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC-AESRIVEAAALFTKLKAFGCEP 114
           + K   +    ++F +++     P++     +++ L   +S I  A  ++  +   G  P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
            V+TYNT+++  C+ G    AL L  +M     ++G +  PN VTY+++++GL   G ++
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQ----KMGCL--PNDVTYNVLVNGLSHSGELE 242

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           +AKEL  +M    L  +  TY  LI G+C     +EA  L  EM+ +G  P +V+ N IM
Sbjct: 243 QAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIM 302

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
             LCK G++ +A +LLD+MV  ++ P+  +YNTL+ G+   G I     LF  +   G  
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
               +YN LI+G C+  +++ A+ L +E+   G  P V T+  L  G  ++     A +L
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422

Query: 355 FVEMQGNDVAADTCTYRTFIDG 376
           F EM    +  D   Y T I G
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVG 444



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 187/373 (50%), Gaps = 10/373 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           V+   +L+  L   +H   V   F R      G      TY+++++   + G +   + +
Sbjct: 44  VAEPQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCV 103

Query: 69  FGRILRSCF--APNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLING 125
             +++          V    L+  + A+  ++E   L F K+ + G  P++   N ++  
Sbjct: 104 MEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRL 163

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           L     +I   ++ +E+ N   E G+  +P  VTY+ ++D  CK+G V +A +L LQM+ 
Sbjct: 164 LRDRDSSI---DVAREVYNVMVECGI--RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQK 218

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN VTY  L++G  H+ +  +AK L+ EM+  G++ +  + + ++   C+ G++D 
Sbjct: 219 MGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDE 278

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           ASRL + M+     P   TYNT+M G C  G+++  ++L   M +     D  SYN LI 
Sbjct: 279 ASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 338

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GY +   + EA  L+ EL F+G+ P+VVTYNTL  GL  +   + A++L  EM  +    
Sbjct: 339 GYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDP 398

Query: 366 DTCTYRTFIDGLC 378
           D  T+   + G C
Sbjct: 399 DVFTFTILVRGFC 411



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 6/265 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +F IL+    K  +      LF  + + GL PD + Y   I    K+G  S 
Sbjct: 394 HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 453

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +L   F P+++T+   I GL     + EA+ L  K+   G  P+ +TY ++I+
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 513

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                GH   A  +F EM +       +F P+ VTY+++I      G +  A   F +M 
Sbjct: 514 AHLMAGHLRKARAVFLEMLSKG-----IF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + ++PNV+TY +LI+G C     ++A     EM  +G+ PN  +  +++NE C  G   
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLM 269
            A RL   M+  +++P++ T++ L+
Sbjct: 628 EALRLYKDMLDREIQPDSCTHSALL 652



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 6/202 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PDL TY++ I+   K+G +     +  ++L +   P+ VT+TS+I        + +A
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 524

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            A+F ++ + G  P+V+TY  LI+     G   +A+  F EM     E GV   PN +TY
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH----EKGV--HPNVITY 578

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I+GLCK   +D+A + F +M+ + ++PN  TYT LI+  C+   W EA  L  +M+D
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 221 QGVQPNVVSSNVIMNELCKNGK 242
           + +QP+  + + ++  L K+ K
Sbjct: 639 REIQPDSCTHSALLKHLNKDYK 660



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 48/256 (18%)

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA---KELFLQMKYENLNP 190
           VAL  F+      G     FK + +TY++I+D L + G +  A    E  + +K EN   
Sbjct: 63  VALRFFRWAERQTG-----FKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMEN--G 115

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELC-KNGKMDNAS 247
            V      +  + +A      K LL+  +MV +G+ P++ + N ++  L  ++  +D A 
Sbjct: 116 VVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAR 175

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            + ++MV+C +RP   TY                                   N +++ +
Sbjct: 176 EVYNVMVECGIRPTVVTY-----------------------------------NTMLDSF 200

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V+EAL L  ++   G  P  VTYN L +GL    + E+A +L  EM    +    
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSA 260

Query: 368 CTYRTFIDGLCVRPQV 383
            TY   I G C + Q+
Sbjct: 261 YTYDPLIRGYCEKGQL 276


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 190/411 (46%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N LL  L K         +F  +   G+ PD+Y +S ++N FC  G+V     +
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   APNVVT+ ++I GLC   R+ EA     K++    +P+++TY  LINGL +
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + KEM++        + PN V Y+ +IDG C+ G +  A ++   M    +
Sbjct: 280 LERFDEANCILKEMSDRG------YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGI 333

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEM------VDQGV------------------- 223
           +PN VT  SLI G+C +N    A+ LL EM      ++QG                    
Sbjct: 334 SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALL 393

Query: 224 ----------QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                     +PN     ++++ LC+NGK   A  L   +++     N  T N L+ G C
Sbjct: 394 FIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLC 453

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G      +L   M   G   D  SYN LI   CK  +VEE   L  E+  +GI+P + 
Sbjct: 454 EAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMY 513

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           TYN L HGL  + + E A  L+ E + N    D  TY   IDG C   +V 
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVE 564



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +L+  L K + +D    + K ++  G  P+   Y+ LI+ +C++G +S    I
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +  +PN VT  SLI+G C  +++  A  L  ++   G   N  T+ ++I+ LC 
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL    EM   N      FKPN    ++++ GLC+ G   +A EL+ ++  +  
Sbjct: 385 KCRFDSALLFIMEMLLRN------FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF 438

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N VT  +LIHG C A    EA  LL EM+++G+  + +S N ++   CK GK++   +
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + MV+  ++P+ +TYN L+ G C  GKI     L+   +  G   D ++Y I+I+GYC
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYC 558

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VEE   L+ E+    I+   V Y TL     E      A +L  +M+   +   + 
Sbjct: 559 KANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSA 618

Query: 369 TYRTFIDGL 377
           TY + I GL
Sbjct: 619 TYSSLIHGL 627



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 178/362 (49%), Gaps = 6/362 (1%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           K+  +  V  LF  L + GLFP L T + L++   K  +V + + +F  +      P+V 
Sbjct: 139 KHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            F++++   C   R+ +A  LF K++  G  PNV+TYN +I+GLC+ G    A    ++M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                      KP+ VTY ++I+GL K    D+A  +  +M      PN V Y +LI G+
Sbjct: 259 EKER------VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C   + + A  +  +M+  G+ PN V+ N ++   CK+ +M++A  LL+ M+      N 
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQ 372

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            T+ +++   CL  + +      + M     K +D    +L++G C+N +  EA+ L+  
Sbjct: 373 GTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           L  KG     VT N L HGL E    E A KL  EM    +  D+ +Y T I   C   +
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492

Query: 383 VR 384
           V 
Sbjct: 493 VE 494



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 181/369 (49%), Gaps = 8/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P      +L+  L +N      + L+ RL   G   +  T + LI+  C+ G       +
Sbjct: 405 PNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      + +++ +LI   C E ++ E   L  ++   G +P++ TYN L++GLC 
Sbjct: 465 LKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCN 524

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  L+ E   NGN        P+  TY I+IDG CK   V++ ++LF +M    
Sbjct: 525 MGKIEEAGGLWHECKKNGNF-------PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  N V Y +LI  +C   +  EA  L  +M  +G+     + + +++ L   G +D+A+
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LLD M +  + PN   Y  L+ G+C  G++++V  +   M       +  +Y I+ING+
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   ++ A  L NE+  KGI P  VTYN L +G  +  + E ALK+   M    ++ D 
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 368 CTYRTFIDG 376
            TY T IDG
Sbjct: 758 ITYTTLIDG 766



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 192/417 (46%), Gaps = 41/417 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F+ ++         D  + LF+++  +G+ P++ TY+ +I+  CK G++   F  
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    P++VT+  LI GL    R  EA  +  ++   G  PN + YNTLI+G CR
Sbjct: 255 KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCR 314

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-------- 180
            G+   AL +  +M + NG       PN+VT + +I G CK   ++ A+ L         
Sbjct: 315 IGNISTALQIRDDMIS-NG-----ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368

Query: 181 ---------------------------LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                                      ++M   N  PN    T L+ G C     +EA  
Sbjct: 369 VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIE 428

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L   ++++G   N V+SN +++ LC+ G  + A++LL  M++  +  ++ +YNTL+   C
Sbjct: 429 LWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACC 488

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+    +L   M   G + D ++YN+L++G C   ++EEA  L++E    G  P   
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           TY  +  G  +  + E   KLF EM    +  +   Y T I   C    +R  +  R
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLR 605



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N L+    K    +    L + +   G+ PD+YTY++L++  C MG++     ++   
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++   P+  T+  +I G C  +R+ E   LF ++     E N + Y TLI   C  G+ 
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L  +M +            + TYS +I GL   G VD A +L  +M+ E L+PNV
Sbjct: 599 REAFRLRDDMRSRG------IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V YT+LI G+C     ++   +L EM    V PN ++  +++N  CK G M  A++LL+ 
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           M Q  + P+A TYN L +GFC  GK+    ++   M + G   DD +Y  LI+G+ K
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 158/335 (47%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+    ++L++  C+ G+ S    ++ R+L   FA N VT  +LI GLC      EAA L
Sbjct: 405 PNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             ++   G   + I+YNTLI   C+ G       L +EM           +P+  TY+++
Sbjct: 465 LKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG------IQPDMYTYNML 518

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GLC  G +++A  L+ + K     P+  TY  +I G+C AN   E + L  EMV   +
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + N V    ++   C+NG M  A RL D M    +   + TY++L+ G    G ++   +
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M   G   +   Y  LI GYCK  ++ +  S+  E+    + P  +TY  + +G  
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++   + A KL  EM    +  D  TY    +G C
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 6/264 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+LL  L      +    L+      G FPD YTY I+I+ +CK  +V  G  +
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++      N V + +LI+  C    + EA  L   +++ G      TY++LI+GL  
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM            PN V Y+ +I G CK G + K   +  +M   N+
Sbjct: 630 IGLVDSANQLLDEMRKEG------LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNV 683

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN +TYT +I+G C   +   A  LL EM  +G+ P+ V+ N + N  CK GKM+ A +
Sbjct: 684 HPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALK 743

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF 272
           + DLM    +  +  TY TL+DG+
Sbjct: 744 VCDLMSTGGISLDDITYTTLIDGW 767



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 6/162 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   ++++ L+  L+     D+   L   +   GL P++  Y+ LI  +CK+GQ+     
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   +  +   PN +T+T +I G C    +  AA L  ++   G  P+ +TYN L NG C
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
           + G    AL +   M+ G   +      + +TY+ +IDG  K
Sbjct: 734 KEGKMEEALKVCDLMSTGGISL------DDITYTTLIDGWHK 769


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 178/332 (53%), Gaps = 6/332 (1%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +   +F
Sbjct: 106 PFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVF 165

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LINGLC+ 
Sbjct: 166 DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A  LF EM      +     PN VT++ +IDG CK G VD A E++ QM  ++L 
Sbjct: 226 NKMDDANKLFDEM------LVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+++TY +LI+G C   D  +A  L+ EM  +G+QP+ ++   +++  CK G +D A   
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEH 339

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++IN +CK
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +V +   L  E+   G  P+VVTYN L +G
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 166/299 (55%), Gaps = 6/299 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  +  FNIL+    K+       S+F  +   GL P + +Y+ L+N + ++G +  GF 
Sbjct: 139 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L S   P+V T++ LI GLC E+++ +A  LF ++      PN +T+ TLI+G C
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHC 258

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   +A+ ++K+M + +        P+ +TY+ +I GLCK+G + +A +L  +M  + 
Sbjct: 259 KNGRVDLAMEIYKQMLSQS------LLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG 312

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +TYT+LI G C   D + A      M+ + ++ + V+   +++ LC+ G+  +A 
Sbjct: 313 LQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
           ++L  M+   ++P+A TY  +++ FC  G + +  +L   M+  G      +YN+L+NG
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKENKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +LF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A+ L+D M    ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 122/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A++L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG++P  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  N  ++A  L  EM+ + + PN V+ 
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G + D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  D  TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   +LF  M       +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           G  + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  GYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  K + P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L ++   +     F  + ++GL PD+ TY+ L+N +CK G +    ++
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +  +  AP V+T+  LI G C    + EA  L  ++   GC P+V TY  L+ G   
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 129 TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
                +A   F EM +                    G I   F+            +TVT
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+IDGLCK G ++ AK+L ++M +  L P+ +TYT LIH  C      EA+    +M+
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ P+ V+  V ++  C+ G + +A      M++  V PN  TYN L+   C TG+  
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                F  M   G   + ++Y +LI+G CK    E+A+  Y E+   GI P  +T+  LF
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 340 HGLFE 344
            G  E
Sbjct: 701 KGFDE 705



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 171/350 (48%), Gaps = 9/350 (2%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           LS F  + S G+ PD+   + ++       +      +   +L+    P++VT+ +L+  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 91  LCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
              E R  + A L  ++  +  GC PN +T+N +I GL R G     L    EM  G   
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD----LEEAAEMVEG--- 299

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
           + +  K ++ TY+ +I GL  +GFV KA +L L+M+ E + P VVTY ++IHG   +   
Sbjct: 300 MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A+   +EM   G+QP+V++ N ++N  CK G +  A  L   +    + P   TYN L
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  G +   + L   M   GC  D  +Y IL+ G      +  A   ++E+  KG+
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +P    YNT       +    +A +L   M    +++DT TY   IDGLC
Sbjct: 480 QPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLC 529



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 188/415 (45%), Gaps = 42/415 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS--IGLFPDLYTYSILINCFCKMGQV---- 62
           P + ++N LL    K    D V  L K + +   G  P+  T++++I    + G +    
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294

Query: 63  -------------------------SLGFVIFGRILR-----SCFAPNVVTFTSLIKGLC 92
                                    + GFV     L+         P VVT+ ++I GL 
Sbjct: 295 EMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              ++  A   F +++A G +P+VITYN+L+NG C+ G    AL LF ++ +        
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG------ 408

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P  +TY+I+IDG C+ G +++A+ L  +M  +   P+V TYT L+ G  +A     A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
               EM+ +G+QP+  + N  +      G +  A RL ++M+   +  +  TYN L+DG 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C TG +N  K+L + M   G + D  +Y  LI+ +C+   + EA   + ++   G+ P+ 
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           VTY    H          A   F +M    V  +  TY   I  LC   + +  Y
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAY 643


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 175/336 (52%), Gaps = 7/336 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD++ Y+ +I+ FCK  ++     +  R+ R  F+P+VVT   +I   C + +I  A  +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 104 FTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           F +L K   C+P +ITY  LI      G    AL L  EM +         +P+T TY++
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRG------LEPDTFTYNV 155

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I  GLCKEG VD+A E    +      P+V+TY  L+    +   W+E +  + E+  +G
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            +PNVV+ +++++ LC++GK++ +  L+ +M +  + P+A+ Y+ L+  FC  GK++   
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           E    M   G   D  +YN ++   CKN   + A+ ++ +L   G  P V +YNT+   L
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +      RAL +  +M    +  D  TY + I  LC
Sbjct: 336 WSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 185/372 (49%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++    K    ++  ++  R+   G  PD+ T++I+I  FC  G++ L   +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           F  +L+   C  P ++T+T LI+    E  I EA  L  ++ + G EP+  TYN +  GL
Sbjct: 102 FEELLKDNNC-KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A    + + N  G      KP+ +TY+I++  L  +G  D+ ++   ++   
Sbjct: 161 CKEGKVDRAFEFVRTL-NSRG-----CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PNVVTY+ LI   C      E+  L+  M ++G+ P+    + ++   C+ GK+D A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
              LD M+     P+   YNT+M   C  G  +   E+F  ++ +GC  +  SYN +++ 
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
              + +   AL + +++  KGI P V+TYN+L   L      + A+ L  +M       +
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394

Query: 367 TCTYRTFIDGLC 378
             +Y+T + GLC
Sbjct: 395 IVSYKTVLLGLC 406



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N++   L K    D      + LNS G  PD+ TY+IL+      G+   G   
Sbjct: 148 PDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKW 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I      PNVVT++ LI  LC + +I E+  L   +K  G  P+   Y+ LI   CR
Sbjct: 208 MSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCR 267

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A+     M      I   F P+ V Y+ I+  LCK G  D A E+F ++     
Sbjct: 268 EGKLDMAIEFLDCM------ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGC 321

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV +Y +++     + D   A G++ +M+ +G+ P+V++ N +++ LC++G +D A  
Sbjct: 322 PPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIG 381

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M+    +PN  +Y T++ G C   +I+   E+  +M   GC+ ++ +Y +LI G  
Sbjct: 382 LLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIG 441

Query: 309 KNKEVEEALSLYNEL 323
            +    +A+ L N L
Sbjct: 442 FSGSRTQAMELANSL 456



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 35/231 (15%)

Query: 183 MKYENLNPNVVTYTSLIH----------------------------------GFCHANDW 208
           M  ++  P+V+  T LI                                   GFC AN  
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNT 267
             AK +L  M  +G  P+VV+ N+++   C  GK+D A ++  +L+   + +P   TY  
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L++ + L G I+   +L   M S G + D F+YN++  G CK  +V+ A      L  +G
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KP V+TYN L   L    + +   K   E+       +  TY   I  LC
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC 231



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP VSS+N +L  L  +      L +  ++ S G+ PD+ TY+ LI+C C+ G V     
Sbjct: 322 PPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIG 381

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L   F PN+V++ +++ GLC   RI +A  +   +   GC+PN  TY  LI G+ 
Sbjct: 382 LLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIG 441

Query: 128 RTGHTIVALNL 138
            +G    A+ L
Sbjct: 442 FSGSRTQAMEL 452



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV +  QP+V+    ++     +  +D A+R++ ++ +   +P+ F YN ++ GFC   +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEK-HGKPDVFAYNAVISGFCKANR 59

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPTVVTYN 336
           I   K +   M+  G   D  ++NI+I  +C   +++ AL ++ EL      KPT++TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGNS 394
            L          + ALKL  EM    +  DT TY     GLC   +V   F + R   + 
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 395 G 395
           G
Sbjct: 180 G 180


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 181/335 (54%), Gaps = 9/335 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+  L        V++LF+R     ++ PD+++++++I   C++GQV     +  R
Sbjct: 48  AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTG 130
           +     +P+ VT   L+ GLC  + +     +  +L+  G C PNV+T+ ++I+G C+ G
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ ++ +M            PNTVTY+++I+G  K G +  A E++ QM      P
Sbjct: 168 KLEDAMAVYNDMVASG------IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 221

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT++SLI G+C     ++A  +  +M    +QPNV + ++I++ LCK  + D A  LL
Sbjct: 222 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLL 281

Query: 251 -DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +L ++ D+ P AF YN ++D  C  GK++    +   ME  GC+ D ++Y ILI GYC 
Sbjct: 282 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCM 341

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              + EA+  ++E+   G  P  +T N     L +
Sbjct: 342 KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 376



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 8/299 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + +       L L +R+N  G  PD  T++IL++  C+  +VS G  +
Sbjct: 80  PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 139

Query: 69  FGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             R+ R     PNVVTFTS+I G C   ++ +A A++  + A G  PN +TYN LING  
Sbjct: 140 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 199

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+ ++++MT       +   P+ VT+S +IDG C+ G +D A  ++  M    
Sbjct: 200 KVGDLGSAVEVYQQMTR------LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 253

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           + PNV T++ +IH  C  N  +EA GLL E+ +   + P     N +++ LCK GK+D A
Sbjct: 254 IQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA 313

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           + +   M +   RP+ +TY  L+ G+C+  +I+     F  M   GC  D  + N  I+
Sbjct: 314 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 372



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 172/355 (48%), Gaps = 13/355 (3%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTS 86
           D   +L  + +  G   + Y Y+ L++     G+V     +F R ++   ++P+V +F  
Sbjct: 28  DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 87

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +IKG+C   ++ +A  L  ++  FGC P+ +T+N L++GLCRT        + + +    
Sbjct: 88  VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 147

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                V  PN VT++ +I G CK G ++ A  ++  M    + PN VTY  LI+G+    
Sbjct: 148 -----VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVG 202

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D   A  +  +M      P+VV+ + +++  C+ G++D+A R+   M Q  ++PN +T++
Sbjct: 203 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 262

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHD----DFSYNILINGYCKNKEVEEALSLYNE 322
            ++   C   K NR  E    +  +  + D     F YN +I+  CK  +V+EA  +   
Sbjct: 263 IIIHSLC---KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 319

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  KG +P   TY  L  G     +   A+  F EM     + D+ T   FI  L
Sbjct: 320 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL 374



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 165/319 (51%), Gaps = 9/319 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
           ++P+   F S +   C  + +++A+A L +K   FGC      YN L++ L   G     
Sbjct: 7   YSPDA-RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + LF+           V+ P+  +++++I G+C+ G V KA EL  +M     +P+ VT+
Sbjct: 66  VALFERWIQDR-----VYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTH 120

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGV-QPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
             L+ G C  N+ +    +L  +   GV  PNVV+   +++  CK GK+++A  + + MV
Sbjct: 121 NILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMV 180

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + PN  TYN L++G+   G +    E++  M  + C  D  +++ LI+GYC+  +++
Sbjct: 181 ASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLD 240

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ-GNDVAADTCTYRTF 373
           +AL +++++    I+P V T++ + H L +  +++ A+ L  E+    D+A     Y   
Sbjct: 241 DALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPV 300

Query: 374 IDGLCVRPQVRFTYARRKG 392
           ID LC   +V      RKG
Sbjct: 301 IDVLCKCGKVDEANLIRKG 319



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 159/304 (52%), Gaps = 9/304 (2%)

Query: 83  TFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
            +  L+  L    R+ +  ALF + ++     P+V ++N +I G+CR G    AL L + 
Sbjct: 48  AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL-NPNVVTYTSLIH 200
           M     E G    P+TVT++I++DGLC+   V +  E+  +++ + +  PNVVT+TS+I 
Sbjct: 108 MN----EFGC--SPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 161

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+C A    +A  +  +MV  G+ PN V+ NV++N   K G + +A  +   M +    P
Sbjct: 162 GYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 221

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           +  T+++L+DG+C  G+++    ++  M     + + ++++I+I+  CK    +EA+ L 
Sbjct: 222 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLL 281

Query: 321 NELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           NEL  +  I P    YN +   L +  + + A  +   M+      D  TY   I G C+
Sbjct: 282 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCM 341

Query: 380 RPQV 383
           + ++
Sbjct: 342 KSRI 345



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 7/174 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +F+ L+    +    D  L ++  +    + P++YT+SI+I+  CK  +      
Sbjct: 220 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIG 279

Query: 68  IFGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +   + LR   AP    +  +I  LC   ++ EA  +   ++  GC P+  TY  LI G 
Sbjct: 280 LLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGY 339

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           C       A+  F EM            P+++T +  I  L K G  ++   + 
Sbjct: 340 CMKSRISEAIMFFHEMVEAG------CSPDSITVNCFISCLLKAGMPNEVDHVM 387


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 64/438 (14%)

Query: 1   MRHMHP-SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
           +R   P  PPP+S +N+L  C  K    D V+ L+K +    + P  YT+++LI+  C+M
Sbjct: 107 LRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEM 166

Query: 60  G--------------------QVSLGFVIFGRI--------------LRSCFA-PNVVTF 84
           G                    + SLG ++ G                +RS  A PN V +
Sbjct: 167 GYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAY 226

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
            ++I  LC E + VEA  L  K++  G  P+++T+N  I  LC++G  + A  +F++M  
Sbjct: 227 NTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI 286

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK-YENLNPNVVTYTSLIHGFC 203
            + E+G+  KPNTVTY+++++G C EG  ++A+ +F  MK  E L  ++ +Y   + G  
Sbjct: 287 -DEEMGLP-KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLGLV 342

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            +    EA  +L EM ++ ++PN+ S N++++ LCK G   +A  +L LM +  V P+  
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           TY+TL+ G+C  GKI     +   M  +GC  + ++ NIL++   K     EA  L   +
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKL------------------FVEM-----QG 360
             +G     VT NT+ +GL +    ++A+++                  F+++      G
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 361 NDVAADTCTYRTFIDGLC 378
                D+ TY T I GLC
Sbjct: 523 KKCLPDSITYATIIGGLC 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 183/407 (44%), Gaps = 34/407 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++  L           L +++  +GL PD+ T++  I   CK GQ+     I
Sbjct: 221 PNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRI 280

Query: 69  FGRIL----RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           F  +          PN VT+  +++G C+E    EA A+F  +K      ++ +YN  + 
Sbjct: 281 FRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN-SETLSLRSYNIWML 339

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R+G  + A  +  EM   N       KPN  +Y+I++ GLCK G    A+ +   M+
Sbjct: 340 GLVRSGKLLEAHLILNEMAEKN------IKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+ VTY++L+HG+C      EA  +L EM+  G  PN+ + N++++ L K G+  
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG------------ 292
            A  LL +M +     +  T NT+++G C  G +++  E+   M + G            
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 293 -----------CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                      C  D  +Y  +I G CK   V+EA     E+  K + P  + ++T  + 
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             +  +   A ++  EM+         TY + I GL    Q+   Y 
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYG 620



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 189/425 (44%), Gaps = 55/425 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV-SLGFV 67
           P + S+NIL+  L K   +    S+   +   G+ PD  TYS L++ +C+ G++    +V
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   I   CF PN+ T   L+  L  E R  EA  L   +   G   + +T NT+INGLC
Sbjct: 424 LREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVFK----------------PNTVTYSIIIDGLCKE 170
           + G+   A+ +   M T G+  +G +                  P+++TY+ II GLCK 
Sbjct: 483 KAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKV 542

Query: 171 GFVDKAKELFLQMKYENLNPNVV-----------------------------------TY 195
           G VD+AK+  L+M  + L+P+ +                                   TY
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            SLI G    N   E  GL+ EM ++G+ PNV + N I++ L + GK+ +A+ LLD M+Q
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ 662

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + PN +T+  L+  F         +ELF    S+ C H +  Y+ + N      E  +
Sbjct: 663 KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLK 721

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L+     + +      Y  L   L +  + + A  +  +M     + D  ++   ID
Sbjct: 722 AKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 781

Query: 376 GLCVR 380
            L  R
Sbjct: 782 ELGKR 786



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 46/338 (13%)

Query: 86  SLIKGLCAESRIVEAAALFTKLK-AFGCEPNVIT-YNTLINGLCRTGHTIVALNLFKEMT 143
           SL++ L     +  A + F  L+  F  +P  I+ YN L     +       + L+K+M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                     KP T T++++I  LC+ G+++ A+E+F +M  +   PN  +   L+ G+C
Sbjct: 146 VAR------VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            A   +    LL EM   G  PN V+ N +++ LC  G+   A +L++ M +  + P+  
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 264 TYNTLMDGFCLTGKINRVKELFVSM---ESMGC-KHDDFSYNILINGYCKNKEVEEALSL 319
           T+N  +   C +G+I     +F  M   E MG  K +  +YN+++ G+C     EEA ++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 320 Y----------------------------------NELPFKGIKPTVVTYNTLFHGLFEI 345
           +                                  NE+  K IKP + +YN L HGL + 
Sbjct: 320 FDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKY 379

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
                A  +   M+ + VA DT TY T + G C R ++
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 7/288 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++G L K    D        +    L PD   +   I  +CK G++S  F +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     ++ T+ SLI+GL +E++I E   L  ++K  G  PNV TYN +I+ L  
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM            PN  T+ I+I    K      A+ELF ++     
Sbjct: 647 GGKLKDATCLLDEMLQKG------ISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLC 699

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                 Y+ + +      +  +AK L    +D+ +         ++ +LCK+GK+D+AS 
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +L  M+      +  ++  ++D     G  +   E    M  M  + D
Sbjct: 760 ILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+    + K+Y ++  +   + +    P +YTY  +IN  CK  +    + +
Sbjct: 261 PGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRV 320

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +    +AP+ V +T++I GLC      EA  L+ ++   G +PN  TYNT+++G  +
Sbjct: 321 FNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLK 380

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  L+ EM N        +   TVT + II  LC  G  D+A E+F +M    +
Sbjct: 381 SGDFERACELYNEMCNKG------YGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGI 434

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY SLI GFC     +E   LL E+V Q  QP+V    +++ + CK+G  + A R
Sbjct: 435 QADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKR 494

Query: 249 LLDLMVQCDVRPNAFTYNTLMDG-----------------------------------FC 273
           LL  M    + PNA+TY+T++ G                                    C
Sbjct: 495 LLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELC 554

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK +   E+F  M   G K D  +YN LI G+CK  +V ++++L NEL  +G++P+  
Sbjct: 555 SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSAS 614

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +Y +L   L +   AE A +L+ +M    +          I GLC
Sbjct: 615 SYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLC 659



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 178/372 (47%), Gaps = 9/372 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSI--LINCFCKMGQVSLGFVI 68
           V+  +IL GCL   K  + +   ++ +   G   D  T ++  LI  FC  GQV+ G+ +
Sbjct: 192 VACNSILSGCLKAGK-TELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYEL 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             + L++   P   T+  LI G C        + +   + A    P + TY  +INGLC+
Sbjct: 251 LNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCK 310

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               + A  +F ++ +        + P+ V Y+ +I GLC+ G   +A++L+ +M  + +
Sbjct: 311 NEECLEAYRVFNDLKDRG------YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGM 364

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY +++HG   + D+  A  L  EM ++G     V+ N I++ELC  GK D A  
Sbjct: 365 QPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFE 424

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +  ++ +A TYN+L+ GFC  GK++    L   + +   +     Y +LI   C
Sbjct: 425 VFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSC 484

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ + E A  L  ++  KG+ P   TY+T+ HG  +    E   +L+ E         T 
Sbjct: 485 KDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTA 544

Query: 369 TYRTFIDGLCVR 380
           T    I  LC R
Sbjct: 545 TCNKIISELCSR 556



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 4/307 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F P+  +    +K LC    I EA  ++ +LK  G   +++  N++++G  + G T +  
Sbjct: 152 FIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLF 211

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
             ++EM       G     NT T   +I   C  G V +  EL  Q     L+P   TY 
Sbjct: 212 EFYQEMIKA----GTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYN 267

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LI GFC A ++     +L  M+ +   P + +   I+N LCKN +   A R+ + +   
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR 327

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P+   Y T++ G C  G     ++L+  M   G + + ++YN +++G  K+ + E A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             LYNE+  KG   T VT N +   L    +++ A ++F +M    + AD  TY + I G
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447

Query: 377 LCVRPQV 383
            C   +V
Sbjct: 448 FCKEGKV 454



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 41/291 (14%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N ++  L      D    +FK+++  G+  D  TY+ LI  FCK G+V     +   ++ 
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING--------- 125
               P+V  +  LI   C +     A  L   + + G  PN  TY+T+++G         
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526

Query: 126 --------------------------LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
                                     LC  G +  A  +FK+M+    E G+  K + +T
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS----ETGI--KADAIT 580

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I G CKEG V K+  L  ++  + L P+  +Y SLI   C   D   AK L  +MV
Sbjct: 581 YNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMV 640

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
            +G++P+      +++ LCK G+       L  M++  ++P    +  L +
Sbjct: 641 SKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 2/159 (1%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G  P+  S    +  LC  G ++ A  +   + +  +R +    N+++ G    GK   +
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 282 KELFVSMESMGCKHDDFSYNI--LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
            E +  M   G   D  +  +  LI  +C + +V     L N+    G+ P   TYN L 
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  + +      ++   M   +      TY+  I+GLC
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLC 309


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+L+  L ++   +      K +   GL PD +TY  LIN  CK  + +    +   +
Sbjct: 259 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 318

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   PNVV + +LI G   E    EA  +  ++ A G +PN ITY+ L+ GLC+ G  
Sbjct: 319 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 378

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L K+M   +       +P+T+TY++II+G  +      A  L  +M+   ++PNV
Sbjct: 379 DRASLLLKQMVRDS------HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 432

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY+ +IHG C + +  +A  LL EM  +G++PN      +++  C+ G +  A  + D 
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 492

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + +V P+ + YN+L+ G    G++    + F  M+  G   ++F+Y+ LI+GY KN +
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 552

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E A  L   +   G+KP  V Y  L    F+    E+    F  M    V  D   Y  
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 612

Query: 373 FIDGL 377
            I  L
Sbjct: 613 LIHNL 617



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 6/353 (1%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           K + +DT   +   +   G   +  TY++LI   C+ G V   F     +      P+  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           T+ +LI GLC   R  EA AL  ++     +PNV+ Y  LI+G  R G+   A  + KEM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                 +    +PN +TY  ++ GLCK G +D+A  L  QM  ++  P+ +TY  +I G 
Sbjct: 354 ------VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
              +   +A  LL EM + G+ PNV + +++++ LC++G+ + AS LL+ M    ++PNA
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
           F Y  L+ G+C  G ++   E+F  M  +    D + YN LI G  K   VEE+   + +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +  +G+ P   TY+ L HG  +    E A +L   M    +  +   Y   ++
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 580



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 8/386 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    +  + D    + K + + G+ P+  TY  L+   CKMGQ+    ++
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+ +T+  +I+G        +A  L ++++  G  PNV TY+ +I+GLC+
Sbjct: 385 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 444

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A +L +EMT          KPN   Y+ +I G C+EG V  A E+F +M   N+
Sbjct: 445 SGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 498

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y SLI G        E+     +M ++G+ PN  + + +++   KNG +++A +
Sbjct: 499 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   ++PN   Y  L++ +  +  I +V   F SM   G   D+  Y ILI+   
Sbjct: 559 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 618

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  +E A  + + +   G  P V  Y++L  GL +    E+A  +  EM    V  +  
Sbjct: 619 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 678

Query: 369 TYRTFIDGLCVRPQVRFTYARRKGNS 394
            Y   IDGLC    +  +YAR   NS
Sbjct: 679 CYNALIDGLCKSGDI--SYARNVFNS 702



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 6/324 (1%)

Query: 53  INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
           +  +CK+ +      +   +       N VT+  LI GLC    + EA      ++ +G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
            P+  TY  LINGLC++  +  A  L  EM+          KPN V Y+ +IDG  +EG 
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE------LKPNVVVYANLIDGFMREGN 342

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            D+A ++  +M    + PN +TY +L+ G C     + A  LL +MV    +P+ ++ N+
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           I+    ++    +A RLL  M    + PN +TY+ ++ G C +G+  +  +L   M + G
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            K + F Y  LI+GYC+   V  A  +++++    + P +  YN+L  GL ++ + E + 
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522

Query: 353 KLFVEMQGNDVAADTCTYRTFIDG 376
           K F +MQ   +  +  TY   I G
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHG 546



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 6/292 (2%)

Query: 86  SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           S ++  C       A  +  +++  GC  N +TYN LI GLCR+G    A    K+M   
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME-- 284

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
             + G+V  P+  TY  +I+GLCK    ++AK L  +M    L PNVV Y +LI GF   
Sbjct: 285 --DYGLV--PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 340

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            + +EA  ++ EMV  GVQPN ++ + ++  LCK G+MD AS LL  MV+   RP+  TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N +++G            L   ME+ G   + ++Y+I+I+G C++ E E+A  L  E+  
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           KG+KP    Y  L  G         A ++F +M   +V  D   Y + I GL
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 188/404 (46%), Gaps = 42/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++I++  L ++   +    L + + + GL P+ + Y+ LI+ +C+ G VSL   I
Sbjct: 430 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 489

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P++  + SLI GL    R+ E+   F +++  G  PN  TY+ LI+G  +
Sbjct: 490 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 549

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-- 186
            G    A  L + M +         KPN V Y  +++   K   ++K    F  M  +  
Sbjct: 550 NGDLESAEQLVQRMLDTG------LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603

Query: 187 ------------NLN---------------------PNVVTYTSLIHGFCHANDWNEAKG 213
                       NL+                     P+V  Y+SLI G C   D  +A G
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L EM  +GV PN+V  N +++ LCK+G +  A  + + ++   + PN  TY +L+DG C
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I+    L+  M + G   D F Y++L  G     ++E+A+ L  E+  +G   ++ 
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASIS 782

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++N L  G  +  + +  LKL   + G  +  +  T    I GL
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 120/223 (53%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           NTVTY+++I GLC+ G V++A      M+   L P+  TY +LI+G C +   NEAK LL
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            EM    ++PNVV    +++   + G  D A +++  MV   V+PN  TY+ L+ G C  
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++R   L   M     + D  +YN++I G+ ++   ++A  L +E+   GI P V TY
Sbjct: 376 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY 435

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + HGL +  + E+A  L  EM    +  +   Y   I G C
Sbjct: 436 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 172/394 (43%), Gaps = 65/394 (16%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL    K+   + V S FK +   G+  D   Y ILI+     G +   F +   I ++ 
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V  ++SLI GLC  +   +A  +  ++   G +PN++ YN LI+GLC++G    A 
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           N+F      N  +     PN VTY+ +IDG CK G +  A  L+ +M    + P+   Y+
Sbjct: 698 NVF------NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 751

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            L  G   A D  +A  L+ EM  +G   ++ S N +++  CK GKM    +LL +++  
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 810

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRV-------------------KELFVSMESMG----- 292
            + PNA T   ++ G    GK++ V                     LF+ M + G     
Sbjct: 811 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 870

Query: 293 ---------CKHDDF--------------------SYNILINGYCKNKEVEEALSLYNEL 323
                    CK  +                     SY  +++  C+  ++ EAL+L  E+
Sbjct: 871 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930

Query: 324 PFKG-IKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +G ++PT+V       G+F  R+    L   V
Sbjct: 931 DKRGNLQPTLVA----LLGIFWFRRHHHILNKVV 960



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 32/329 (9%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVA- 135
           AP    F  L   LCA S    A  L  K+ +A+   P V+   ++   L  +GH     
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA--SIHRALSDSGHPFAGG 176

Query: 136 ----LNLFKEMTNGNGEIGVVFKPNT------VTYSII----------------IDGLCK 169
                   +E+  G G  G   +P+         +S++                ++  CK
Sbjct: 177 ARRPRGYLQEVWEGAGRRG--GRPDDERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCK 234

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
               D AK++ ++M+      N VTY  LI G C +    EA G   +M D G+ P+  +
Sbjct: 235 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 294

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
              ++N LCK+ + + A  LLD M   +++PN   Y  L+DGF   G  +   ++   M 
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           + G + +  +Y+ L+ G CK  +++ A  L  ++     +P  +TYN +  G F     +
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A +L  EM+   ++ +  TY   I GLC
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLC 443



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 29/306 (9%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V  ++ L+  L K    +    +   ++  G+ P++  Y+ LI+  CK G +S   
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  IL     PN VT+TSLI G C    I  A  L+ ++ A G  P+   Y+ L  G 
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 127 CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
              G    A+ L +EM   G+  I         +++ ++DG CK G + +  +L   +  
Sbjct: 758 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 809

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-------------------MVDQGVQPN 226
             L PN +T  ++I G   A   +E   + +E                   M++QG  P 
Sbjct: 810 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            V  ++I +  CK G +D A  L D++V         +Y  ++D  C  GK++    L  
Sbjct: 870 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 928

Query: 287 SMESMG 292
            M+  G
Sbjct: 929 EMDKRG 934



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 68/146 (46%)

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK  + D A ++L  M +     N  TYN L+ G C +G +         ME  G   D 
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           F+Y  LING CK++   EA +L +E+    +KP VV Y  L  G      A+ A K+  E
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQV 383
           M    V  +  TY   + GLC   Q+
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQM 378


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 183/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S  +LL  L K K +   +++F  +      P  + Y   I    K+  V  G  +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+      P+V  +  LI GLC   R+ +A  LF ++ A    P++ITYNTLI+G C+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   +  + + M   + E      P+ +T++ ++ GL K G V+ A+ +  +MK    
Sbjct: 262 AGNPEKSFKVRERMKADHIE------PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T++ L  G+        A G+    VD GV+ N  + ++++N LCK GK++ A  
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L   +   + PN   YNT++DG+C  G +   +    +ME  G K D  +YN LI  +C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  E+E A    N++  KG+ P+V TYN L  G     + ++   +  EM+ N    +  
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495

Query: 369 TYRTFIDGLC 378
           +Y T I+ LC
Sbjct: 496 SYGTLINCLC 505



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 187/371 (50%), Gaps = 6/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+L+  L K K  +    LF  + +  L P L TY+ LI+ +CK G     F +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+      P+++TF +L+KGL     + +A  +  ++K  G  P+  T++ L +G   
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +++   +     GV  K N  T SI+++ LCKEG ++KA+E+  +   + L
Sbjct: 332 NEKAEAALGVYETAVDS----GV--KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V Y ++I G+C   D   A+  +  M  QG++P+ ++ N ++   C+ G+M+NA +
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            ++ M    V P+  TYN L+ G+    + ++  ++   ME  G   +  SY  LIN  C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++ EA  +  ++  +G+ P V  YN L  G     + E A +   EM    +  +  
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565

Query: 369 TYRTFIDGLCV 379
           TY T IDGL +
Sbjct: 566 TYNTLIDGLSM 576



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 181/354 (51%), Gaps = 15/354 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F+IL    + N+  +  L +++     G+  + YT SIL+N  CK G++     I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            GR +     PN V + ++I G C +  +V A      ++  G +P+ + YN LI   C 
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            G          EM N   E+  +      P+  TY+I+I G  ++   DK  ++  +M+
Sbjct: 437 LG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNVV+Y +LI+  C  +   EA+ +  +M D+GV P V   N++++  C  GK++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A R    M++  +  N  TYNTL+DG  +TGK++  ++L + +   G K D F+YN LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +GY     V+  ++LY E+   GIKPT+ TY+ L   L      E   +LF EM
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 10/384 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+ PS   + +FN LL  L K    +   ++ K +  +G  PD +T+SIL + +    + 
Sbjct: 279 HIEPS---LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                ++   + S    N  T + L+  LC E +I +A  +  +  A G  PN + YNT+
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G CR G  + A    + M           KP+ + Y+ +I   C+ G ++ A++   +
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQG------MKPDHLAYNCLIRRFCELGEMENAEKEVNK 449

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK + ++P+V TY  LI G+    ++++   +L EM D G  PNVVS   ++N LCK  K
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A  +   M    V P    YN L+DG C  GKI         M   G + +  +YN 
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI+G     ++ EA  L  E+  KG+KP V TYN+L  G       +R + L+ EM+ + 
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629

Query: 363 VAADTCTYRTFIDGLCVRPQVRFT 386
           +     TY   I  LC +  +  T
Sbjct: 630 IKPTLKTYHLLI-SLCTKEGIELT 652



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 13/361 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+G   +   +D    + K +   G  P++ +Y  LINC CK  ++    ++
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P V  +  LI G C++ +I +A     ++   G E N++TYNTLI+GL  
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           TG    A +L  E++          KP+  TY+ +I G    G V +   L+ +MK   +
Sbjct: 577 TGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P + TY  LI   C        + L  EM    ++P+++  N +++    +G M+ A  
Sbjct: 631 KPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFN 686

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  +  +  TYN+L+ G    GK+  V+ L   M +   + +  +YNI++ G+C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN---DVAA 365
           + K+   A   Y E+  KG    V   N L  GL E  +++ A  +  EM G    DV  
Sbjct: 747 EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTV 806

Query: 366 D 366
           D
Sbjct: 807 D 807



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 162/337 (48%), Gaps = 10/337 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+ P + TY+ILI  + +  +    F I   +  +   PNVV++ +LI  LC  S+++EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +   ++  G  P V  YN LI+G C  G    A    KEM     E+      N VTY
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL------NLVTY 567

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDGL   G + +A++L L++  + L P+V TY SLI G+  A +      L  EM  
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G++P + + +++++ LC    ++   RL   M    ++P+   YN ++  + + G + +
Sbjct: 628 SGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              L   M       D  +YN LI G  K  ++ E  SL +E+  + ++P   TYN +  
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           G  E++    A   + EMQ      D C     + GL
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%)

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            + +A +LF  ++ E + P+  + T L+        +     + + +++   +P+     
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
             +    K   +     L + M    + P+ F YN L+DG C   ++N  ++LF  M + 
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
                  +YN LI+GYCK    E++  +   +    I+P+++T+NTL  GLF+    E A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDG 376
             +  EM+      D  T+    DG
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDG 328



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 10/174 (5%)

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           +EA  L   + ++G+ P+  S  ++++ L K  +      +   +++ D RP+ F Y   
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDD-----FSYNILINGYCKNKEVEEALSLYNEL 323
           +        + +  ELF  M     KHD      F YN+LI+G CK K + +A  L++E+
Sbjct: 186 IQAAVKLSDVGKGLELFNRM-----KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             + + P+++TYNTL  G  +    E++ K+   M+ + +     T+ T + GL
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + P++ +   L+D    T +      +F+++     +   F Y   I    K  +V + L
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L+N +    I P+V  YN L  GL + ++   A +LF EM    +     TY T IDG 
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259

Query: 378 CV--RPQVRFTYARR 390
           C    P+  F    R
Sbjct: 260 CKAGNPEKSFKVRER 274


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 198/404 (49%), Gaps = 40/404 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+++  L K   +D    ++ R+       DLYTYS LI+  C  G +     +
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 69  FGRILRSCFAPNVVTFTS----------------------------------LIKGLCAE 94
           +  +  +  +P+VV + +                                  LI+GL   
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN 347

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           +++ EA +++  L    C  + +TY  L++GLC+ G+   AL++ +E  NG G++     
Sbjct: 348 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL----- 402

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            +T  YS +I+GLC+EG +D+   +  QM      PN     ++I+GF  A+   +A   
Sbjct: 403 -DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRF 461

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              MV +G  P VV+ N ++N L K  +   A  L+  M+Q   +PN  TY+ LM+G C 
Sbjct: 462 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQ 521

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             K++    L+      G K D   +NI+I+G C + +VE+AL LY+E+  +   P +VT
Sbjct: 522 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVT 581

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +NTL  G +++R  ERA K++  +    +  D  +Y   + GLC
Sbjct: 582 HNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC 625



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 74/439 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N LL  L ++  +D   S F    ++GL P+L TY+ILI   C+  Q      +
Sbjct: 87  PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    F+P+V ++ +LI  L     + +A  LF ++   G  P+V  YN LI+G  +
Sbjct: 147 LNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 206

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  +++ +  G         PN  +Y+++I+GLCK G  D++ E++ +MK    
Sbjct: 207 KGDILNASEIWERLLKGPS-----VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 261

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN---------------------- 226
             ++ TY++LIHG C + + + A  +  EM + GV P+                      
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321

Query: 227 ------------VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY--------- 265
                       VVS N+++  L +N K+D A  + +L+ + D   ++ TY         
Sbjct: 322 LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCK 381

Query: 266 --------------------------NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
                                     +++++G C  G+++ V  +   M   GCK + + 
Sbjct: 382 NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            N +ING+ +  ++E+AL  +  +  KG  PTVVTYNTL +GL +  +   A  L  EM 
Sbjct: 442 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 501

Query: 360 GNDVAADTCTYRTFIDGLC 378
                 +  TY   ++GLC
Sbjct: 502 QKGWKPNMITYSLLMNGLC 520



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NIL+  L +N   D  +S+++ L       D  TY +L++  CK G ++    I  
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                    +   ++S+I GLC E R+ E A +  ++   GC+PN    N +ING  R  
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL  F  M +        F P  VTY+ +I+GL K     +A  L  +M  +   P
Sbjct: 454 KLEDALRFFGNMVSKG-----CF-PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKP 507

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY+ L++G C     + A  L  + +++G +P+V   N+I++ LC +GK+++A +L 
Sbjct: 508 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 567

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M Q +  PN  T+NTLM+GF       R  +++  +   G + D  SYNI + G C  
Sbjct: 568 SEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSC 627

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
             + +A+   N+   +G+ PT +T+N L  G   ++     + +   M+GN
Sbjct: 628 HRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKGN 678



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 180/389 (46%), Gaps = 28/389 (7%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPD--------------LYTYSIL 52
           S P   S   ++  L   K+  + LS+F   +S+  FP               L+   ++
Sbjct: 3   SAPKSLSPKRVIKLLKSEKNPHSALSIF---DSVTRFPGYSHTPYVFHHILKRLFDPKLV 59

Query: 53  INCFCKMGQVSLGFVIFGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            + + K         IF R +   F   P + ++ SL+  L   ++  EA + F   +  
Sbjct: 60  AHAYAKNSMPDQALDIFQR-MHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  PN+ TYN LI   CR      A  L   M  G G     F P+  +Y  +I+ L K 
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMW-GQG-----FSPDVFSYGTLINSLAKN 172

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVS 229
           G++  A +LF +M    + P+V  Y  LI GF    D   A  +   ++    V PN+ S
Sbjct: 173 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 232

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            NV++N LCK GK D +  +   M + +   + +TY+TL+ G C +G ++    ++  M 
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 292

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   D   YN ++NGY +   +EE L L+  +  +G + TVV+YN L  GLFE  + +
Sbjct: 293 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 351

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            A+ ++  +   D  AD+ TY   + GLC
Sbjct: 352 EAISIWELLPEKDCCADSMTYGVLVHGLC 380



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 6/194 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L+K + +    +L K +   G  P++ TYS+L+N  C+  ++ +   +
Sbjct: 472 PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNL 531

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + + L   F P+V     +I GLC+  ++ +A  L++++K   C PN++T+NTL+ G  +
Sbjct: 532 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  ++  +      +    +P+ ++Y+I + GLC    +  A           +
Sbjct: 592 VRDFERASKIWDHI------LQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGV 645

Query: 189 NPNVVTYTSLIHGF 202
            P  +T+  L+ G+
Sbjct: 646 LPTAITWNILVQGY 659


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+    K   ++ V  + + +    +  +  TY++LI  +   G+++    +
Sbjct: 248 PNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKV 307

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L      ++  FTS+I   C    +  A ALF +L   G   N  TY  LI+G C 
Sbjct: 308 FEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCN 367

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A  L  EM +   ++      N V ++ +I+G CK+G +D+A  +   M+ +  
Sbjct: 368 SGQLDAAEMLVNEMQSQGLDM------NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGF 421

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++ TY ++  G C  N   EAK  L  MV++GV PN VS  ++++  CK G +  A R
Sbjct: 422 ENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAER 481

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +   +PN  TYNTL+DG+   GK+     L   MES+G   D ++Y  L++G C
Sbjct: 482 VFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGEC 541

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              +VEEAL+L NE+  KG+  ++VTY  +  GL +  ++E A +L+ EM    +  D  
Sbjct: 542 VFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDR 601

Query: 369 TYRTFIDGL 377
            Y + +  L
Sbjct: 602 VYTSLVANL 610



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 31/352 (8%)

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           +SLGF  F +++       V + T +I GLC + R+  A  L  ++   G +PNV+TYNT
Sbjct: 198 MSLGF--FKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNT 255

Query: 122 LING------------------LCRTGHTIVALNLFKEMTNGNGEIGVVFK--------- 154
           L+N                   + +  +      L  E    +G+I    K         
Sbjct: 256 LVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERG 315

Query: 155 --PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              +   ++ II   CK G + +A  LF ++    L  N  TY +LIHG C++   + A+
Sbjct: 316 VEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAE 375

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ EM  QG+  N+V  N ++N  CK G +D A R+ D+M +     + FTYNT+  G 
Sbjct: 376 MLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGL 435

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +    K    +M   G   +  S+ I+I+ +CK   + EA  ++ ++  KG KP V
Sbjct: 436 CKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNV 495

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           VTYNTL  G  +  + + A +L  EM+   + +D  TY T + G CV  +V 
Sbjct: 496 VTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVE 547



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 62/123 (50%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
             P V ++N L+   +K         L   + SIG+  D+YTY+ L++  C  G+V    
Sbjct: 491 EKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEAL 550

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   + R   A ++VT+T++I GL  E R  EA  L+ ++ A G  P+   Y +L+  L
Sbjct: 551 TLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610

Query: 127 CRT 129
            +T
Sbjct: 611 HKT 613



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 72/171 (42%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV  G++ +  S  V +  L ++ +M  +      MV+  V    ++   ++DG C  G+
Sbjct: 171 MVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGR 230

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           + R K+L + M   G K +  +YN L+N Y K  + E    +   +    +     TY  
Sbjct: 231 VERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTL 290

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           L        +   A K+F +M    V AD   + + I   C    ++  +A
Sbjct: 291 LIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFA 341


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 177/365 (48%), Gaps = 8/365 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL    + K+   V  + K + S G+ P + TY+IL++     G +S    +F  I 
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R   A +V  ++++I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIE 290

Query: 134 VALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            A  L  +M   G G        N + ++ +IDG C+ G VDKA E+   M+   +  +V
Sbjct: 291 AAEMLLTDMQLRGVGH-------NQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDV 343

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY +L  G C  N   +AK LL  M + GV+ N VS   +++   K G M  A RL   
Sbjct: 344 YTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRD 403

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M     RP+  TYN ++DG+  +G I   +     ME  G   D ++Y  L++G+C N +
Sbjct: 404 MEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGK 463

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+ AL L+ E+  +G KP VV Y  L  GL +  ++E A + +  M    +  D   Y  
Sbjct: 464 VDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSM 523

Query: 373 FIDGL 377
            +  L
Sbjct: 524 LVGSL 528



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 163/334 (48%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L+       V S+F  +    +  D+Y YS +IN +C+ G V     +
Sbjct: 201 PTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEV 260

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   + +   PN  T+ +LI G C   +I  A  L T ++  G   N I +NT+I+G CR
Sbjct: 261 FDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCR 320

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL +   M      +G+    +  TY+ +  GLC+   ++ AK+L   M    +
Sbjct: 321 HGMVDKALEIKAVMER----MGIQL--DVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V+YT+LI       D  EA+ L  +M  +G +P+VV+ NV+++   K+G +  A R
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  + P+ +TY  L+ G C+ GK++    LF  M+  G K +  +Y  LI+G  
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           K    EEA   Y+ +   G+ P    Y+ L   L
Sbjct: 495 KEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 167/339 (49%), Gaps = 12/339 (3%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
           + S++++ FCK G++     +   + R     N   +  L+     +      A +  ++
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           ++ G EP V TY  L++GL   G      ++F E+   N    V F      YS +I+  
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF------YSAVINAY 248

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           C+ G V +A E+F +     + PN  TY +LI+GFC       A+ LL +M  +GV  N 
Sbjct: 249 CRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQ 308

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           +  N +++  C++G +D A  +  +M +  ++ + +TYNTL  G C   ++   K+L   
Sbjct: 309 IIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHI 368

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE--- 344
           M   G + +  SY  LI+ + K  ++ EA  L+ ++  KG +P+VVTYN +  G  +   
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           IR+AER  K   EM+   +  D  TY   + G CV  +V
Sbjct: 429 IREAERFKK---EMEKKGLVPDVYTYAALVHGHCVNGKV 464



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 152/309 (49%), Gaps = 8/309 (2%)

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
           C  P  ++ + ++ G C   R+ +A  L  ++   G + N   YN L++   R  +    
Sbjct: 130 CITP--LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             + KEM +G  E      P   TY+I++DGL   G + K + +F ++K +N+  +V  Y
Sbjct: 188 AEVLKEMESGGVE------PTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFY 241

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           +++I+ +C A +   A  +  E V  G++PN  +   ++N  CK G+++ A  LL  M  
Sbjct: 242 SAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             V  N   +NT++DG+C  G +++  E+   ME MG + D ++YN L  G C+   +E+
Sbjct: 302 RGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMED 361

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L + +   G++   V+Y TL     +      A +LF +M+G        TY   ID
Sbjct: 362 AKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 421

Query: 376 GLCVRPQVR 384
           G      +R
Sbjct: 422 GYIKSGSIR 430



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N+++    K+          K +   GL PD+YTY+ L++  C  G+V +  
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVAL 468

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + +    PNVV +T+LI GL  E R  EA   +  + A G  P+   Y+ L+  L
Sbjct: 469 RLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 185/350 (52%), Gaps = 7/350 (2%)

Query: 41   GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
            G   D  T +++I  FC+   V+     F ++ +   +PN++ ++S+I GLC    + +A
Sbjct: 861  GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 920

Query: 101  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
              L  ++   G +PNV T+ +LI+GLC+ G T  A  LF ++   +      +KPN  TY
Sbjct: 921  FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN-----YKPNVHTY 975

Query: 161  SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
            + +I G CKE  + +A+ LF +MK + L PN  TYT+LI G C A ++++A  L+  M +
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 221  QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            +G  PN  + N I++ LCK G+ + A +LL+   Q  +  +  TY  L+   C    +N+
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 1095

Query: 281  VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                   M  +G + D   Y  LI  +C+   ++++  L++E+   G+ PT  TY ++  
Sbjct: 1096 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 1155

Query: 341  GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
            G    ++   A+K F +M  +  A D+ +Y   I GLC   + R   AR+
Sbjct: 1156 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC--KESRLDEARQ 1203



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 187/376 (49%), Gaps = 10/376 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + +++ ++  L K         L + +   G  P++YT++ LI+  CK G     F +
Sbjct: 899  PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958

Query: 69   FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            F +++RS  + PNV T+T++I G C E ++  A  LF ++K  G  PN  TY TLI+G C
Sbjct: 959  FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + G+   A  L + M+N        F PNT TY+ I+DGLCK G  ++A +L        
Sbjct: 1019 KAGNFSKAYELMELMSNEG------FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 1072

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +  + VTYT LI   C   D N+A   L +M   G QP++     ++   C+   M ++ 
Sbjct: 1073 IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSE 1132

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L D +++  + P   TY +++ G+C   K++   + F  M   GC  D  SY  LI+G 
Sbjct: 1133 KLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGL 1192

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            CK   ++EA  LY+ +  KG+ P  VT  TL    +E  + E      V ++  +     
Sbjct: 1193 CKESRLDEARQLYDTMIDKGLSPCEVTRVTL---TYEYCKTEDFASAMVILERLNKKLWI 1249

Query: 368  CTYRTFIDGLCVRPQV 383
             T  T I  LC   +V
Sbjct: 1250 RTVHTLIRKLCCEKKV 1265



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 150/295 (50%), Gaps = 8/295 (2%)

Query: 91   LCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
            + AE R+VE A  +F ++ A G  P+  TY  +I G CR G+ + A     EM     E 
Sbjct: 805  VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ER 860

Query: 150  GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            G V   +  T ++II   C++  V++A   F ++    L+PN++ Y+S+I G C      
Sbjct: 861  GFVV--DNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 918

Query: 210  EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFTYNTL 268
            +A  LL EMV  G +PNV +   +++ LCK G  + A RL   +++ D  +PN  TY  +
Sbjct: 919  QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 978

Query: 269  MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            + G+C   K++R + LF  M+  G   +  +Y  LI+G+CK     +A  L   +  +G 
Sbjct: 979  ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 1038

Query: 329  KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P   TYN++  GL +  +AE A KL      N + AD  TY   I   C R  +
Sbjct: 1039 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 1093



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 6/194 (3%)

Query: 211  AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
            A  +  EM  +GV P+  +   I+   C+NG +  A R +  M++     +  T   ++ 
Sbjct: 815  AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874

Query: 271  GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             FC    +NR    F  +  MG   +  +Y+ +I+G CK   V++A  L  E+   G KP
Sbjct: 875  AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934

Query: 331  TVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVR 384
             V T+ +L HGL +    ERA +LF+++ + ++   +  TY   I G C      R ++ 
Sbjct: 935  NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 994

Query: 385  FTYARRKGNSGNTN 398
            F   + +G   NTN
Sbjct: 995  FERMKEQGLVPNTN 1008



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 82/179 (45%)

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F       EA  ++++M +QG+       N I+    +   ++ A  + D M    V P+
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + TY  ++ G+C  G +         M   G   D+ +  ++I  +C+   V  A+  ++
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           ++   G+ P ++ Y+++  GL +    ++A +L  EM  N    +  T+ + I GLC +
Sbjct: 891 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 949


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 191/374 (51%), Gaps = 10/374 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  L        V ++   + S G+ PD+ T++ILI   CK  Q+    ++   + 
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+  TFT+L++G   E  +  A  +  ++   GC    +T N L++G C+ G   
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280

Query: 134 VALNLFKEMTN-GNGEIGVVF---------KPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            AL+   EM+N G   + +           +P+  TY+++ID LC  G + +A  L  +M
Sbjct: 281 EALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           +      NV+TY +LI GFC      EA+ +  +M  QG+  N V+ N +++ LCK+ ++
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRV 400

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
             A++L+D M+   ++P+ FTYN+++  FC  G I +  ++  +M S GC+ D  +Y  L
Sbjct: 401 QEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTL 460

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I G CK   VE A  L   +  KG+  T   YN +   LF+ ++ + A++LF EM+    
Sbjct: 461 IGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGN 520

Query: 364 AADTCTYRTFIDGL 377
             D  TY+    GL
Sbjct: 521 TPDAFTYKIVFRGL 534



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 190/387 (49%), Gaps = 23/387 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P VS+FNIL+  L K       + + + ++S GL PD  T++ L+  F + G +   F +
Sbjct: 191 PDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRV 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA----------------LFTKLKAFGC 112
             ++L +      VT   L+ G C E RI EA +                L+ ++K  GC
Sbjct: 251 KEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGC 310

Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           +P+  TYN LI+ LC  G    AL L +EM     EI    + N +TY+ +IDG CK   
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREM-----EISGCAR-NVITYNTLIDGFCKNKK 364

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +++A+E+F QM+ + L+ N VTY +LI G C +    EA  L+ +M+ +G++P+  + N 
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++   C+ G +  A+ ++  M      P+  TY TL+ G C  G++     L  S++  G
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG 484

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA-ERA 351
                 +YN +I    K K  +EA+ L+ E+  KG  P   TY  +F GL         A
Sbjct: 485 MVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEA 544

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   +EM       +  ++    +GLC
Sbjct: 545 VDFVIEMIEKGFLPEFSSFYMLAEGLC 571



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 17/315 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+  L         L L + +   G   ++ TY+ LI+ FCK  ++     I
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++     + N VT+ +LI GLC   R+ EAA L  ++   G +P+  TYN+++   CR
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMKYE 186
            G    A ++ + MT+   E      P+ VTY  +I GLCK G V+ A  L   +Q+K  
Sbjct: 432 EGDIQKAADIVQTMTSNGCE------PDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGM 485

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDN 245
            L P+   Y  +I          EA  L  EM ++G  P+  +  ++   L  + G +  
Sbjct: 486 VLTPHA--YNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGE 543

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN--IL 303
           A   +  M++    P   ++  L +G C       +++  + +  +  +  +FS N  ++
Sbjct: 544 AVDFVIEMIEKGFLPEFSSFYMLAEGLCSLS----MEDTLIKLVDLVMEKANFSQNEVVM 599

Query: 304 INGYCKNKEVEEALS 318
           I G+ K ++ ++AL+
Sbjct: 600 IRGFLKIRKFQDALA 614



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 144/354 (40%), Gaps = 92/354 (25%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           T   L++ L R      AL L    +         F+PN+  Y  I+  L K G  +  K
Sbjct: 53  TPAQLLDTLRRQNDETAALRLLSWASKQPN-----FRPNSSIYEEILRKLGKVGSFNSMK 107

Query: 178 ELFLQMK-----------------------YEN-------------LNPNVVTYTSLIHG 201
           ++  +MK                       YE              L  + + Y  L++ 
Sbjct: 108 DILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNV 167

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
               N     + +   MV +G++P+V + N+++  LCK  ++  A  +++ M    + P+
Sbjct: 168 LVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPD 227

Query: 262 AFTYNTLMDGFCLTGKIN---RVK------------------------------------ 282
             T+ TLM GF   G ++   RVK                                    
Sbjct: 228 EKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFID 287

Query: 283 ------------ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
                       EL+  M++ GC+ D+F+YN+LI+  C   +++EAL L  E+   G   
Sbjct: 288 EMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR 347

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            V+TYNTL  G  + ++ E A ++F +M+   ++ ++ TY T IDGLC   +V+
Sbjct: 348 NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQ 401


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S NI+L  L           +FK ++ I   P+L +Y+I+I+  CK  +V     +F 
Sbjct: 171 LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFK 229

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +++     P+VVT+ +LI GL  + R+ EA  LF + +A GC P V+TYNT+I+GLC+ G
Sbjct: 230 QMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L+ +M           KP+  TYS +I+GL      +KA EL+ +M     +P
Sbjct: 290 RIENALTLYDDMVREPH-----LKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP 344

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           +VVTY +L+ G C +   ++A  +  +M V     PNV++  V+++  CK  ++ +A +L
Sbjct: 345 DVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKL 404

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG--CKHDDFSYNILINGY 307
              M    + P+A T+ T++   C   +I+   ELF   ES+G  CK D   +N ++ GY
Sbjct: 405 AKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF---ESIGKTCKPDSVLFNTMLAGY 461

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           CK   +++A  L++ +   G  PT+ TY  L  G     +   AL ++ EM
Sbjct: 462 CKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 174/324 (53%), Gaps = 9/324 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+ I++  L K++  D  ++LFK++    ++PD+ TY  LI+   K  +V   + +
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
           F         P VVT+ ++I GLC   RI  A  L+  + +    +P++ TY+ LINGL 
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            +     A  L++EM +          P+ VTY+ ++DGLCK G  DKA E+F +M   N
Sbjct: 323 LSNRGEKAYELYEEMLDTG------CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376

Query: 188 L-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           + +PNV+TYT LI  FC  +   +A  L  EM  + + P+ V+   ++ +LCK  ++D A
Sbjct: 377 VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA 436

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + + +   +P++  +NT++ G+C   +I+  K+L   M   GC     +Y  L+ G
Sbjct: 437 HELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495

Query: 307 YCKNKEVEEALSLYNELPFKGIKP 330
           +C+     +AL +Y+E+   G  P
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 189/372 (50%), Gaps = 11/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N L+    K       L+LF  +   G+   L +++I++   C  G++S+ + +
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEV 193

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F + +   F+PN++++T +I GLC   ++ +A  LF ++      P+V+TY  LI+GL +
Sbjct: 194 F-KDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-N 187
                 A +LF+E     G       P  VTY+ +IDGLCK G ++ A  L+  M  E +
Sbjct: 253 QRRVKEAYDLFEE-ARAKG-----CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPH 306

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P++ TY++LI+G   +N   +A  L  EM+D G  P+VV+ N +++ LCK+G  D A 
Sbjct: 307 LKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAM 366

Query: 248 RLLDLMVQCDV-RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +   M   +V  PN  TY  L+D FC   ++    +L   ME      D  ++  +I  
Sbjct: 367 EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQK 426

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   ++EA  L+  +  K  KP  V +NT+  G  +I + + A KL   M  +  A  
Sbjct: 427 LCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485

Query: 367 TCTYRTFIDGLC 378
             TY   + G C
Sbjct: 486 LATYTALVTGFC 497



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 30/376 (7%)

Query: 38  NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSLIKGLCAESR 96
            S+GL+ D+    ++     ++   +  + +F     +S F  N  T  +L+       R
Sbjct: 58  KSLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARR 117

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------ 144
           + +A   F        EP+ ++YNTL+NG  + G    AL LF EM +            
Sbjct: 118 VEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIV 177

Query: 145 -----GNGEIGV----------VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                  G+I +          +F PN ++Y+I+IDGLCK   VDKA  LF QM  + + 
Sbjct: 178 LRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIY 237

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+VVTY +LI G        EA  L  E   +G  P VV+ N +++ LCK G+++NA  L
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297

Query: 250 LDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            D MV +  ++P+ FTY+ L++G  L+ +  +  EL+  M   GC  D  +YN L++G C
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357

Query: 309 KNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           K+   ++A+ ++ ++    +  P V+TY  L     ++ +   A+KL  EM+G  +  D 
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417

Query: 368 CTYRTFIDGLCVRPQV 383
            T+ T I  LC   ++
Sbjct: 418 VTFTTVIQKLCKESRI 433



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N  + N +++   K  ++++A       ++    P+  +YNTLM+GF   G + +   LF
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFE 344
             M+  G      S+NI++ G C   ++  A  ++ ++   GI  P +++Y  +  GL +
Sbjct: 161 GEMKDSGIAVLR-SHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCK 217

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY-----ARRKG 392
            R+ ++A+ LF +M    +  D  TY   IDGL  + +V+  Y     AR KG
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 270


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  I +    P+VV+F +L+ G      + E   L   + A G +P+V TY+ LIN
Sbjct: 155 AQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM     E G+V  PN VT++ +IDG CK G +D A E++ Q+ 
Sbjct: 215 GLCKESKMDEAHELFDEML----EKGLV--PNGVTFTTLIDGHCKNGKLDLAMEIYKQIL 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L+P+++TY +LI+GFC   D  + + L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y I++
Sbjct: 329 TAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVM 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CKN +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 149/308 (48%), Gaps = 6/308 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           +++   K+    L +  +  IL   +  ++  F  L+   C E  I  A  +F  +  +G
Sbjct: 107 VLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWG 166

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
            +P+V+++NTL+NG  + G       L   M     +      P+  TYS++I+GLCKE 
Sbjct: 167 LKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQ------PDVYTYSVLINGLCKES 220

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +D+A ELF +M  + L PN VT+T+LI G C     + A  +  +++ QG+ P++++ N
Sbjct: 221 KMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYN 280

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++   CK G +     L+D M    ++P+  TY TL+DG C  G +    E    M   
Sbjct: 281 TLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEE 340

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
             + DD  Y  LI+G CK     +A  +  E+   G+KP   TY  + +   +       
Sbjct: 341 NIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTG 400

Query: 352 LKLFVEMQ 359
            KL  EMQ
Sbjct: 401 SKLLKEMQ 408



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+      +E   L   M 
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G QP+V + +V++N LCK  KMD A  L D M++  + PN  T+ TL+DG C  GK++
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  + S G   D  +YN LI G+CK  ++++   L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +   +M   ++  D   Y   I GLC
Sbjct: 319 DGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLC 357



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      F       F     T   ++  L            +
Sbjct: 65  DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A  +F  +T          KP+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWG------LKPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  K G +D+   L   M      P+V TY+ LI+G C  +  +EA  L  EM+++G+ 
Sbjct: 179 NGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNGK+D A  +   ++   + P+  TYNTL+ GFC  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E A     ++  + I+   V Y  L  GL +
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCK 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             ++  A K+  EM    +  D+ TY   ++  C
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFC 392



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H   + P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G++
Sbjct: 198 HASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKL 257

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            L   I+ +IL    +P+++T+ +LI G C +  + +   L  ++   G +P+ ITY TL
Sbjct: 258 DLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTL 317

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G    A    K+M   N       + + V Y+ +I GLCKEG    A+++  +
Sbjct: 318 IDGSCKEGDLETAFEYRKKMIEEN------IRLDDVVYTALISGLCKEGRSVDAEKMLRE 371

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           M    L P+  TYT +++ FC   D N    LL EM   G  P+VV+
Sbjct: 372 MLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
            +P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN +++ A+
Sbjct: 202 AQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  +G+ P ++TYNTL +G  +    ++   L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 135/281 (48%), Gaps = 12/281 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G      VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E F   +         T   ++        +    G   E+++ G   
Sbjct: 75  AYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G++  A  + D + +  ++P+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++EA  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 195 NAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            + + A++++ ++    ++ D  TY T I G C +  ++ T
Sbjct: 255 GKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQT 295


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  ++  L K    D    +   L   GL P + TY++L++  CK G+V   F + GR+
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +    P+VVTF  LI GL    R  E   +  +++  G  PN + YN LI   CR GH 
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL LF EM           KP  VTY++I   LCKEG +++A+ +   M    +  + 
Sbjct: 343 SQALRLFDEMVLKK------MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 396

Query: 193 VTYTSLIHGFCHANDWNEA-KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             + +++          E+   +  EMV +G++PN       M ELCK GK   A  +  
Sbjct: 397 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
             +   +  N  T N L+ G C    +    ++  +M + G + D  +YNI+I G CK+ 
Sbjct: 457 KTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDS 516

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           ++EEA+ L+ ++  +G KP + T+NTL H    + + E    L  +M+   +  D  +Y 
Sbjct: 517 KMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYG 576

Query: 372 TFIDGLCVRPQVR 384
           T IDG C    +R
Sbjct: 577 TIIDGHCKAKDIR 589



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 7/362 (1%)

Query: 14  FNILLGCL-AKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           FN ++  L  + +  ++V+S+   + + G+ P+    +  +   CK G+      I+ + 
Sbjct: 399 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 458

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L      N+ T  +LI GLC    + EA  +   +   G E + ITYN +I G C+    
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ L  +MT         FKP+  T++ ++   C  G +++   L  QMK E L P++
Sbjct: 519 EEAIKLHGDMTRRG------FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDI 572

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V+Y ++I G C A D  +AK  L E++D+G++PNV   N ++    +NG +  A   ++ 
Sbjct: 573 VSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVET 632

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    ++P   TY +LM   C  G +   K +F              Y I+I GYCK  +
Sbjct: 633 MKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGK 692

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           + EA++ + E+  +GI P  +TY TL +   +   +E A KLF EM G+ V  D  TY T
Sbjct: 693 MVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGT 752

Query: 373 FI 374
            I
Sbjct: 753 LI 754



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F IL+  LA+ + +  V  + + +  +G+ P+   Y+ LI   C+ G  S    +
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
           F  ++     P  VT+  + K LC E  +  A  +   + + G   +   +NT++  L  
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           RT      +++  EM T G        +PN    +  +  LCK G   +A  ++ +   +
Sbjct: 409 RTRRLESVVSITNEMVTRG-------MRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 461

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  N+ T  +LIHG C      EA  ++  M+++G++ + ++ N+++   CK+ KM+ A
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 521

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L   M +   +P+ FT+NTL+  +C  GK+     L   M++ G + D  SY  +I+G
Sbjct: 522 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 581

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK K++ +A     EL  +G+KP V  YN L  G         A+     M+ N +   
Sbjct: 582 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 641

Query: 367 TCTYRTFIDGLC 378
             TY + +  +C
Sbjct: 642 NVTYGSLMYWMC 653



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 19/381 (4%)

Query: 2   RHMHPSPPPVSSFNILLGCLAK----NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           R M P+ P      ++  C+ +     KH + V   FK LN  GL  +L T + LI+  C
Sbjct: 426 RGMRPNDP------LMTACMRELCKGGKHQEAVGIWFKTLNK-GLGVNLATSNALIHGLC 478

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           +   +     +   +L      + +T+  +I+G C +S++ EA  L   +   G +P++ 
Sbjct: 479 EGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLF 538

Query: 118 TYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           T+NTL++  C  G      +L  +M T G        +P+ V+Y  IIDG CK   + KA
Sbjct: 539 TFNTLLHAYCNLGKMEETFHLLDQMKTEG-------LQPDIVSYGTIIDGHCKAKDIRKA 591

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           KE   ++    L PNV  Y +LI G+    D + A   +  M   G+QP  V+   +M  
Sbjct: 592 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 651

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           +C  G ++ A  +     + +V      Y  ++ G+C  GK+      F  M S G   +
Sbjct: 652 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             +Y  L+  Y K+   EEA  L++E+   G+ P  +TY TL     E+   ++ +    
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTA 771

Query: 357 EMQGNDVAADTCTYRTFIDGL 377
           E+    +  D   Y    +G+
Sbjct: 772 ELSSGALTKDDRMYNILSNGI 792



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 44/346 (12%)

Query: 71  RILRSCFAP-NVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCR 128
           R+L S  AP ++ T  + ++ L    ++  A  +F +++ +     N  +Y  +I  LC+
Sbjct: 174 RVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCK 233

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       +  E+           +P  VTY++++D LCK G V++A  L  +M+   +
Sbjct: 234 AGKVDAGFEMLAELWRAG------LQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+  LI+G      + E   +L EM   GV PN V  N ++   C+ G    A R
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D MV   ++P A TYN +    C  G++ R + +   M S+G       +N ++    
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407

Query: 309 -KNKEVEEALSLYNELPFKGIKP-----------------------------------TV 332
            + + +E  +S+ NE+  +G++P                                    +
Sbjct: 408 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            T N L HGL E +  + A K+   M    +  D+ TY   I G C
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCC 513


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 181/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G   +  + +   L + + A G +P+V TY+ LIN
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDEANELFXEMLDK----GLV--PNGVTFTTLIDGHCKNGKVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK+G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 329 TAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 152/302 (50%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  + ++F  ++ +G  P+V+
Sbjct: 113 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  +D+A 
Sbjct: 173 SFNTLMNGYIRQGDLDKGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKMDEAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L++ M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 287 CKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +        KL  E
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  ++ +F  ++   L P+VV++ +L++G+    D ++   L   M 
Sbjct: 139 FNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L   M+   + PN  T+ TL+DG C  GK++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A +L NE+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLC 357



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   ++ ++F  +           +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  ++G +DK   L   M    + P+V TY+ LI+G C  +  +EA  L  EM+D+G+ 
Sbjct: 179 NGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNGK+D A  +   M+   + P+  TYNTL+ G C  G + + + L
Sbjct: 239 PNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK+ ++E A      +  + I+   V Y  L  GL +
Sbjct: 299 INEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D+ TY   I+  C +  V
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDV 397



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 121/229 (52%), Gaps = 10/229 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L    +P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 317 LIDGSCKDGDLETAFEYRKRMIEEN------IRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D W  +K LL EM   G  P+VV+
Sbjct: 371 EMLSVGLKPDSGTYTMIINEFCKKGDVWTGSK-LLKEMQRDGHVPSVVT 418



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   ++ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 142 LMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN +V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKDGDLETAFEYRK 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC     + A  L + + +  G      VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G++  +  + D + +  +RP+  ++NTLM+G+   G +++   L 
Sbjct: 135 SLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++EA  L+ E+  KG+ P  VT+ TL  G  + 
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 203/443 (45%), Gaps = 64/443 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L +N      L +++++ ++G+ PD+++Y+I++N +CK G+V   F  
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + RSC  PNVVT+ SLI G  +   +  A  +   +   G   N  TY  LI G C+
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338

Query: 129 TGHTIVALNLFKEMTNGN-----------------------------GEIGVVFKPNTVT 159
            G    A  L   M   N                               + V  K NTV 
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            + +I+G CK G V+KA E+ + MK  NL P+   Y +L+ GFC   D+ +A  L  EM 
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD--------- 270
           ++GV   VV+ N ++  L   G +++A  + +LM +  V PN  TY TL+D         
Sbjct: 459 NKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518

Query: 271 --------------------------GFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
                                     GFC   K+ + +E+F+ M+ +G   D+ +Y  LI
Sbjct: 519 RAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLI 578

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +GYCK   + EAL L +     GI  +   YN+L  G+F   + ++   L  EM+  +++
Sbjct: 579 DGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELS 638

Query: 365 ADTCTYRTFIDGLCVRPQVRFTY 387
            +  TY + I G C +  +   Y
Sbjct: 639 PNVVTYGSLIAGWCDKGMMDKAY 661



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 41/403 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N LL  L    H +  L ++  ++  G+ P+  TY  L++ F K+G      +I+ 
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             L   F  ++  + ++I G C   ++V+A  +F K+K  G  P+ ITY TLI+G C+ G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           + + AL L K+M+  +G        +T  Y+ +I G+ +   + K   L  +MK   L+P
Sbjct: 586 NLVEALKL-KDMSERDG-----ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVVTY SLI G+C     ++A     +M+D+G+ PN++  + I++ L ++GK+D A+ +L
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 251 DLMV---------------QCDVR--------------------PNAFTYNTLMDGFCLT 275
             +                + D+R                     N   YN  + G C +
Sbjct: 700 HQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
             I+ V+ +   +   G   D+++Y  LI+      +V EA  L +++   G+ P +V Y
Sbjct: 760 KNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVY 819

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N L +GL +    +RA +LF ++    ++    TY T IDG C
Sbjct: 820 NALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 169/329 (51%), Gaps = 6/329 (1%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            + +++  F + G       +F  + +    P++ +  SL+  L       +A  ++ ++
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A G  P++ +Y  ++N  C+ G    A N  KEM     E      PN VTY+ +IDG 
Sbjct: 248 IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE------PNVVTYNSLIDGY 301

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
              G V  AK++   M  + +  N  TYT LI G+C      +A+ L+  M+++ +  + 
Sbjct: 302 VSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDE 361

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
               V+++  C  G++D+A R+ D M++  ++ N    N+L++G+C  G +N+  E+ VS
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+    K D + YN L++G+CK ++  +A  L +E+  KG+  TVVTYNTL   LF +  
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDG 376
            E AL ++  M    VA +  TY T +D 
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDA 510



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+++L   A+       L +F  +   G  P L + + L++   + G+     +++ +++
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P++ ++T ++   C E R+ EA     +++   CEPNV+TYN+LI+G    G   
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +   M+    E G+    N+ TY+++I G CK G +++A++L   M  +NL  +  
Sbjct: 309 GAKKVLALMS----EKGI--PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            Y  LIH +C A   ++A  +   M+  G++ N V  N ++N  CK G ++ A+ +L  M
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM 422

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
              +++P+++ YNTL+DGFC      +  +L   M + G      +YN L+        V
Sbjct: 423 KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E AL ++N +  +G+ P  VTY TL    F++   +RA+ ++ +            Y T 
Sbjct: 483 EHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 374 IDGLC 378
           I G C
Sbjct: 543 ICGFC 547



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 184/412 (44%), Gaps = 51/412 (12%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++ +N ++    K +       +F ++  +G  PD  TY  LI+ +CK+G +     +  
Sbjct: 536 ITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
              R   + +   + SLI G+     + +   L  ++K     PNV+TY +LI G C  G
Sbjct: 596 MSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKG 655

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A N + +M +          PN +  S I+  L + G +D+A  +  Q+   +++P
Sbjct: 656 MMDKAYNAYFKMIDKG------IAPNIIIGSKIVSSLYRHGKIDEANLILHQI--ADIDP 707

Query: 191 -------------------------------------NVVTYTSLIHGFCHANDWNEAKG 213
                                                N + Y   I G C + + ++ + 
Sbjct: 708 IAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRR 767

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L +++ +G  P+  +   +++     GK++ A  L D M+   + PN   YN L++G C
Sbjct: 768 ILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLC 827

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G ++R + LF  +   G      +YN LI+GYCK     EAL L +++  +GI P+ +
Sbjct: 828 KSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSI 887

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRF 385
           TY+TL HGL+   ++E+++ L  EM      +      + +D L  R  V++
Sbjct: 888 TYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGS------SVMDPLVARAYVKW 933



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 6/357 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    ++ +L+    K    +    L   +    LF D + Y +LI+ +C  G+V     
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   +L+     N V   SLI G C    + +AA +   +K +  +P+   YNTL++G C
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC 442

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +    I A  L  EM N     GV F    VTY+ ++  L   G V+ A  ++  M    
Sbjct: 443 KQEDFIKAFKLCDEMHNK----GVNF--TVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN VTY +L+  F     ++ A  +  + + +G   ++   N ++   CK  K+  A 
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   M +    P+  TY TL+DG+C  G +    +L    E  G       YN LI G 
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            +++E+++   L  E+  + + P VVTY +L  G  +    ++A   + +M    +A
Sbjct: 617 FRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIA 673



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 9/177 (5%)

Query: 10  PVSS---FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P+S+   +NI +  L K+K+ D V  +   L   G  PD YTY  LI+    +G+V+  F
Sbjct: 742 PISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAF 801

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   ++ +   PN+V + +LI GLC    +  A  LF KL   G  P V+TYNTLI+G 
Sbjct: 802 CLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGY 861

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           C+ G T  AL L  +M     E G+   P+++TYS +I GL  EG  +++  L  +M
Sbjct: 862 CKGGRTTEALELKDKMR----EEGIC--PSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 55/311 (17%)

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV---------------TYSIIIDGL 167
           ++  C+  H +    ++KE+     E+ V+ K N +               ++S  +  +
Sbjct: 132 VSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDM 191

Query: 168 CKEGFVDKAKELFLQMKYENLN-----PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
             + F +K    F    ++N+      P++ +  SL+       +  +A  +  +M+  G
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P++ S  +++N  CK G++D A   +  M +    PN  TYN+L+DG+   G +   K
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEE--------------------------- 315
           ++   M   G   +  +Y +LI GYCK  ++E+                           
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAY 371

Query: 316 --------ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                   AL + + +   G+K   V  N+L +G  ++    +A ++ V M+  ++  D+
Sbjct: 372 CTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDS 431

Query: 368 CTYRTFIDGLC 378
             Y T +DG C
Sbjct: 432 YGYNTLLDGFC 442



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 20/231 (8%)

Query: 174 DKAKELF-LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV--------DQGVQ 224
           D + E F L  K     P+V +Y  ++H    A  + E +  L E+V           V 
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVW 172

Query: 225 PNVVSS-----------NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
             +VS            ++I+    + G    A  + D M +C   P+  + N+L+    
Sbjct: 173 DELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+  +   ++  M ++G   D FSY I++N YCK   V+EA +   E+     +P VV
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           TYN+L  G   +     A K+   M    +  ++ TY   I G C R Q+ 
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 95  HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRV 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 389 NEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 159/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 173 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDDAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP + TY  + +   +     +  KL  E
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 406

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N  A    TY   ++G
Sbjct: 407 MQRNGHAPSVVTYNVLMNG 425



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 357



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDV 397



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 142 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLDTAFEHRK 335



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 137/279 (49%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   ++++ G   
Sbjct: 75  AYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 185/350 (52%), Gaps = 7/350 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G   D  T +++I  FC+   V+     F ++ +   +PN++ ++S+I GLC    + +A
Sbjct: 274 GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 333

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  ++   G +PNV T+ +LI+GLC+ G T  A  LF ++   +      +KPN  TY
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN-----YKPNVHTY 388

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I G CKE  + +A+ LF +MK + L PN  TYT+LI G C A ++++A  L+  M +
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G  PN  + N I++ LCK G+ + A +LL+   Q  +  +  TY  L+   C    +N+
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 508

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
                  M  +G + D   Y  LI  +C+   ++++  L++E+   G+ PT  TY ++  
Sbjct: 509 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 568

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           G    ++   A+K F +M  +  A D+ +Y   I GLC   + R   AR+
Sbjct: 569 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC--KESRLDEARQ 616



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 191/377 (50%), Gaps = 12/377 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ ++  L K         L + +   G  P++YT++ LI+  CK G     F +
Sbjct: 312 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 371

Query: 69  FGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F +++RS  + PNV T+T++I G C E ++  A  LF ++K  G  PN  TY TLI+G C
Sbjct: 372 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 431

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G+   A  L + M+N        F PNT TY+ I+DGLCK G  ++A +L L   ++N
Sbjct: 432 KAGNFSKAYELMELMSNEG------FFPNTCTYNSIVDGLCKRGRAEEAFKL-LNTGFQN 484

Query: 188 -LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  + VTYT LI   C   D N+A   L +M   G QP++     ++   C+   M ++
Sbjct: 485 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L D +++  + P   TY +++ G+C   K++   + F  M   GC  D  SY  LI+G
Sbjct: 545 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 604

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   ++EA  LY+ +  KG+ P  VT  TL    +E  + E      V ++  +    
Sbjct: 605 LCKESRLDEARQLYDTMIDKGLSPCEVTRVTL---TYEYCKTEDFASAMVILERLNKKLW 661

Query: 367 TCTYRTFIDGLCVRPQV 383
             T  T I  LC   +V
Sbjct: 662 IRTVHTLIRKLCCEKKV 678



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 150/295 (50%), Gaps = 8/295 (2%)

Query: 91  LCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           + AE R+VE A  +F ++ A G  P+  TY  +I G CR G+ + A     EM     E 
Sbjct: 218 VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ER 273

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G V    T+T  +II   C++  V++A   F ++    L+PN++ Y+S+I G C      
Sbjct: 274 GFVVDNATLT--LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 331

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD-VRPNAFTYNTL 268
           +A  LL EMV  G +PNV +   +++ LCK G  + A RL   +++ D  +PN  TY  +
Sbjct: 332 QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 391

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G+C   K++R + LF  M+  G   +  +Y  LI+G+CK     +A  L   +  +G 
Sbjct: 392 ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 451

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            P   TYN++  GL +  +AE A KL      N + AD  TY   I   C R  +
Sbjct: 452 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 506



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 8/235 (3%)

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G + +A ++ L M+ + L         +I           A  +  EM  +GV P+  + 
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 231 NVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
             I+   C+NG +  A R + ++M +  V  NA T   ++  FC    +NR    F  + 
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNA-TLTLIITAFCEKSLVNRAVWFFHKVT 306

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
            MG   +  +Y+ +I+G CK   V++A  L  E+   G KP V T+ +L HGL +    E
Sbjct: 307 KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTE 366

Query: 350 RALKLFVEM-QGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGNTN 398
           RA +LF+++ + ++   +  TY   I G C      R ++ F   + +G   NTN
Sbjct: 367 RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTN 421



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 81/177 (45%)

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           F       EA  ++++M +QG+       N I+    +   ++ A  + D M    V P+
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + TY  ++ G+C  G +         M   G   D+ +  ++I  +C+   V  A+  ++
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++   G+ P ++ Y+++  GL +    ++A +L  EM  N    +  T+ + I GLC
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC 360


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + J
Sbjct: 84  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJ 143

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 203

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+      A  LF EM       G+V  PN V ++ +IDG CK G VD A E++ QM 
Sbjct: 204 GXCKESKXDDANELFDEMLVK----GLV--PNXVXFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 258 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLD 317

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q + R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 318 SAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMII 377

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 378 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 102 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVV 161

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+G CKE   D A 
Sbjct: 162 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGXCKESKXDDAN 215

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN V +T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 216 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + D+
Sbjct: 276 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDE 335

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C      +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 336 VXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 395

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 396 MQRDGHVPSVVTYNVLMNG 414



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 117/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N  CK  K D+A+ L D M+   + PN   + TL+DG C  G+++
Sbjct: 188 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 247

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   +   D   Y   I GLC
Sbjct: 308 DGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLC 346



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DJY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 54  DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG------LRPSVVSYNTLM 167

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 168 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLV 227

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V    +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 228 PNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 287

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  +  +   V Y  L  GL  
Sbjct: 288 IDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCX 347

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 348 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 386



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLIT 63

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +             T   ++        +    G   E+++ G   
Sbjct: 64  AYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 123

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 124 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 183

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  + ++A  L++E+  KG+ P  V + TL  G  + 
Sbjct: 184 SAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKN 243

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 282


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 185/347 (53%), Gaps = 9/347 (2%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L   G   D  +Y++LIN +CK G++     +      +  APN  T+ +++  LC   +
Sbjct: 130 LEESGAVIDANSYNVLINAYCKSGEIEEALRVLDH---TSVAPNAATYDAVLCSLCDRGK 186

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A  +  +     C P+V+T   LI+  C+      A+ LF EM  G G      KP+
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM-RGKG-----CKPD 240

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+++I G CKEG +D+A     ++       +V+++  ++   C    W +A  LL 
Sbjct: 241 VVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLA 300

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M+ +G  P+VV+ N+++N LC+ G +  A  +L++M +    PN+ ++N L+ GFC   
Sbjct: 301 TMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRK 360

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            I+R  E    M S GC  D  +YNIL+   CK+ +V++A+ + ++L  KG  P++++YN
Sbjct: 361 GIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYN 420

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           T+  GL ++ +AE A++L  EM    +  D  T  + + GL    +V
Sbjct: 421 TVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 467



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++++ +L  L         + +  R      +PD+ T ++LI+  CK   V     +
Sbjct: 169 PNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P+VVT+  LIKG C E R+ EA     KL ++GC+ +VI++N ++  LC 
Sbjct: 229 FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCS 288

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A+ L   M          F P+ VT++I+I+ LC++G + KA  +   M     
Sbjct: 289 GGRWMDAMKLLATMLRKG-----CF-PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 342

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  ++  LI GFC+    + A   L  MV +G  P++V+ N+++  LCK+GK+D+A  
Sbjct: 343 TPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 402

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  +      P+  +YNT++DG    GK     EL   M   G K D  +   ++ G  
Sbjct: 403 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 462

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +V EA+  ++ L   GIKP    YN++  GL + +Q   A+   V+M  N       
Sbjct: 463 REGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEA 522

Query: 369 TYRTFIDGL 377
           +Y T I G+
Sbjct: 523 SYTTLIKGI 531



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 29/349 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +  +L+    K       + LF  +   G  PD+ TY++LI  FCK G++    + 
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++       +V++   +++ LC+  R ++A  L   +   GC P+V+T+N LIN LC+
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323

Query: 129 TGHTIVALNLFKEMT-------------------NGNG--------EIGVVFK--PNTVT 159
            G    ALN+ + M                    N  G        EI V     P+ VT
Sbjct: 324 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT 383

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I++  LCK+G VD A  +  Q+  +  +P++++Y ++I G         A  LL EM 
Sbjct: 384 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 443

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P++++   ++  L + GK+  A +    +    ++PNAF YN++M G C   + +
Sbjct: 444 YKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTS 503

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
              +  V M + GCK  + SY  LI G       EEA  L NEL  +G+
Sbjct: 504 LAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 3/212 (1%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L + G +++       M  +   P+VV  T+LI  FC       A  ++  + + G   +
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
             S NV++N  CK+G+++ A R+LD      V PNA TY+ ++   C  GK+ +  ++  
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                 C  D  +  +LI+  CK   V +A+ L+NE+  KG KP VVTYN L  G  +  
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + A+    ++      +D  ++   +  LC
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 6/223 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   H   P   SFN L+      K  D  +   + + S G +PD+ TY+IL+   CK G
Sbjct: 336 MMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDG 395

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V    VI  ++     +P+++++ ++I GL    +   A  L  ++   G +P++IT  
Sbjct: 396 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 455

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           +++ GL R G    A+  F  +       G   KPN   Y+ I+ GLCK      A +  
Sbjct: 456 SVVGGLSREGKVHEAIKFFHYLK------GFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL 509

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + M      P   +YT+LI G  +     EA  L  E+  +G+
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 182/351 (51%), Gaps = 11/351 (3%)

Query: 35  KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAE 94
           + ++S+   PD +TY+ LI   C  G V     +F  +L    +P+VVT++ L+   C E
Sbjct: 149 RMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKE 208

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           S   +A  L  ++++ GCEP+++TYN LIN +C  G    AL +   + +         K
Sbjct: 209 SGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYG------CK 262

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+ VTY+ ++  LC     ++A +L  +M   +  P+ VT+ ++I   C       A  +
Sbjct: 263 PDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKV 322

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD----LMVQCDVRPNAFTYNTLMD 270
           L +M + G  P++++ + IM+ LCK  ++D A +LL      MV  +  P+  T+NT++ 
Sbjct: 323 LAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIIT 382

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY-CKNKEVEEALSLYNELPFKGIK 329
             C  G  +R  ++   M   GC  D  +YN +++G+ CK+ + EEAL L N +   G+ 
Sbjct: 383 SLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLC 442

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           P   TY +L  GL    + ERA+ +F  +Q   ++ D   Y   + GLC +
Sbjct: 443 PDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKK 493



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 11/377 (2%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L         L++F  +   G  P + TYSIL++  CK       
Sbjct: 155 PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQA 214

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            V+   +      P++VT+  LI  +C++  + EA  +   L ++GC+P+ +TY  ++  
Sbjct: 215 VVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKS 274

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC +     A  L  +M + +        P+ VT++ +I  LC++GFV +A ++  QM  
Sbjct: 275 LCSSERWEEADKLLTKMFSND------CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSE 328

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEA----KGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
               P+++TY+S++ G C     +EA    K LL EMV +   P+ V+ N I+  LC+ G
Sbjct: 329 HGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKG 388

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGF-CLTGKINRVKELFVSMESMGCKHDDFSY 300
             D A +++D M +    P+  TYN ++DGF C + K     +L   M S G   D  +Y
Sbjct: 389 LFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTY 448

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             L  G  +  E+E A+ ++  +   G+ P  + YN +  GL +  + + A+  F  M  
Sbjct: 449 KSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVS 508

Query: 361 NDVAADTCTYRTFIDGL 377
           N    D  TY   ++G+
Sbjct: 509 NGCMPDESTYIILVEGI 525



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 17/374 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   NIL+  L  +     V    + + ++G    + TY+ ++N +C+ G +     +
Sbjct: 94  PAVIPCNILIKKLCADGR---VADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRM 150

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +    FAP+  T+  LI+ LC    +++A A+F  +   GC P+V+TY+ L++  C+
Sbjct: 151 IDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCK 207

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  EM +   E      P+ VTY+++I+ +C +G V +A ++   +     
Sbjct: 208 ESGYKQAVVLLDEMRSKGCE------PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGC 261

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYT ++   C +  W EA  LL +M      P+ V+ N ++  LC+ G +  A++
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATK 321

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR----VKELFVSMESMGCKHDDFSYNILI 304
           +L  M +    P+  TY+++MDG C   +++     +KEL   M S  C  D  ++N +I
Sbjct: 322 VLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTII 381

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG-LFEIRQAERALKLFVEMQGNDV 363
              C+    + A+ + +E+   G  P + TYN +  G L +  + E AL L   M  N +
Sbjct: 382 TSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGL 441

Query: 364 AADTCTYRTFIDGL 377
             DT TY++   GL
Sbjct: 442 CPDTTTYKSLAFGL 455



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 156/306 (50%), Gaps = 16/306 (5%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P V+    LIK LCA+ R+ +A  +   ++A G    +ITYNT++NG CR G+   A  +
Sbjct: 94  PAVIPCNILIKKLCADGRVADAERV---VEALGPSATIITYNTMVNGYCRAGNIDAARRM 150

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
                       V F P+T TY+ +I  LC  G V  A  +F  M +   +P+VVTY+ L
Sbjct: 151 IDS---------VPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSIL 201

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +   C  + + +A  LL EM  +G +P++V+ NV++N +C  G +  A ++L+ +     
Sbjct: 202 LDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGC 261

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +P+A TY  ++   C + +     +L   M S  C  D+ ++N +I   C+   V  A  
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATK 321

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK----LFVEMQGNDVAADTCTYRTFI 374
           +  ++   G  P ++TY+++  GL + R+ + A+K    L  EM   +   D  T+ T I
Sbjct: 322 VLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTII 381

Query: 375 DGLCVR 380
             LC +
Sbjct: 382 TSLCQK 387



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 165/355 (46%), Gaps = 46/355 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ILL    K   Y   + L   + S G  PD+ TY++LIN  C  G V     +
Sbjct: 193 PSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKV 252

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ VT+T ++K LC+  R  EA  L TK+ +  C P+ +T+N +I  LC+
Sbjct: 253 LNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQ 312

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA----KELFLQMK 184
            G    A  +  +M+    E G    P+ +TYS I+DGLCKE  VD+A    KEL  +M 
Sbjct: 313 KGFVGRATKVLAQMS----EHGCT--PDIITYSSIMDGLCKERRVDEAIKLLKELLAEMV 366

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE-LCKNGKM 243
            +N  P+ VT+ ++I   C    ++ A  ++ EM + G  P++ + N I++  LCK+ K 
Sbjct: 367 SKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKT 426

Query: 244 DNASRLLDLMVQ-----------------------------------CDVRPNAFTYNTL 268
           + A  LL+LMV                                      + P+   YN +
Sbjct: 427 EEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAI 486

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           + G C   + +   + F  M S GC  D+ +Y IL+ G      +EEA  L   L
Sbjct: 487 LLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 12/296 (4%)

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           ++GL     +  A  L   +   G +P VI  N LI  LC  G    A  + + +    G
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL----G 123

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
               +     +TY+ +++G C+ G +D A+ +   + +    P+  TY  LI   C    
Sbjct: 124 PSATI-----ITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGC 175

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             +A  +  +M+ +G  P+VV+ +++++  CK      A  LLD M      P+  TYN 
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L++  C  G +    ++  S+ S GCK D  +Y  ++   C ++  EEA  L  ++    
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             P  VT+N +   L +     RA K+  +M  +    D  TY + +DGLC   +V
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRV 351


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+++  L ++   +      + +   GL PD +TY  L+N  CK G++     +   +
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S   PNVV + +L+ G   E +  EA  +  ++ + G +PN I Y+ LI GLC+ G  
Sbjct: 342 SCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L  EM      I V  +P+T TY  ++ G  +    D A EL  +M+   + PN 
Sbjct: 402 GRASKLLNEM------IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNA 455

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY  +I+G C   +  EA  LL EM+ +G++PN      ++    K G +  A   L+ 
Sbjct: 456 YTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLEN 515

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + +V P+ F YN+L+ G    G+I   +E +  ++  G   D+F+Y+ LI+GYCK + 
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+A  L  ++   G+KP   TY  L  G F+    E+   +   M G+    D   Y  
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635

Query: 373 FIDGL 377
            I  L
Sbjct: 636 VIRNL 640



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 181/369 (49%), Gaps = 6/369 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +++  L    K + +D    +F+ +       +  TY+++I+  C+ G V   F 
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
               ++    +P+  T+ +L+ GLC   R+ EA AL  ++   G +PNV+ Y TL++G  
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A ++  EM      I    +PN + Y  +I GLCK G + +A +L  +M    
Sbjct: 362 KEGKAAEAFDILNEM------ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+  TY  L+ G     D + A  LL EM + G+ PN  +  +++N LC+NG+   A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL+ M+   ++PNAF Y  L+ G    G I+   E   +M       D F YN LI G 
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                +EEA   Y ++  +G+ P   TY+ L HG  + R  E+A +L  +M  + +  + 
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 368 CTYRTFIDG 376
            TY   ++G
Sbjct: 596 DTYTDLLEG 604



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 6/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N LL  L +    + V  L   +   G+ PD+YTYS  +   CK         +F  + R
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
              A N VT+  +I GLC    + EA     ++  +G  P+  TY  L+NGLC+ G    
Sbjct: 274 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKE 333

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A  L  EM+          KPN V Y+ ++DG  KEG   +A ++  +M    + PN + 
Sbjct: 334 AKALLDEMSCSG------LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIM 387

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y +LI G C       A  LL EM+  G +P+  + + +M    ++   D A  LL+ M 
Sbjct: 388 YDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR 447

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + PNA+TY  +++G C  G+      L   M S G K + F Y  LI G+ K   + 
Sbjct: 448 NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A      +    + P +  YN+L  GL  + + E A + + ++Q   +  D  TY   I
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567

Query: 375 DGLC 378
            G C
Sbjct: 568 HGYC 571



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 179/399 (44%), Gaps = 44/399 (11%)

Query: 25  KHYDT--VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           +HYD      L   + + G+ P+ YTY I+IN  C+ G+      +   ++     PN  
Sbjct: 432 QHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            +  LI G   E  I  A      +      P++  YN+LI GL   G    A   + ++
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                + G+V  P+  TYS +I G CK   ++KA +L  QM    L PN  TYT L+ G+
Sbjct: 552 Q----KRGLV--PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY 605

Query: 203 CHANDWNEAKGLLIEMVDQGVQPN-----VVSSNVIMNE--------------------- 236
             +ND  +   +L  M+  G +P+     +V  N+  +E                     
Sbjct: 606 FKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 665

Query: 237 ---------LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                    LCK   M+ A  LLD M +  + P    YN L+DGFC +G I+R + +F S
Sbjct: 666 HIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 725

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           + + G   +  +Y  LI+G CKN ++ +A  LY ++  +GI P    YN L  G  +   
Sbjct: 726 ILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
            E+AL L  EM  N   A    + T + G C R +++ T
Sbjct: 786 LEQALFLTEEMF-NRGYAHVSLFSTLVRGFCKRGRLQET 823



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 182/405 (44%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L K        +L   ++  GL P++  Y+ L++ F K G+ +  F I
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDI 372

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
              ++ +   PN + + +LI+GLC   ++  A+ L                         
Sbjct: 373 LNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQ 432

Query: 104 -FTKLKAF---------GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
            + K  AF         G  PN  TY  +INGLC+ G +  A NL +EM      I    
Sbjct: 433 HYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM------ISEGL 486

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KPN   Y+ +I G  KEG +  A E    M   N+ P++  Y SLI G        EA+ 
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              ++  +G+ P+  + + +++  CK   ++ A +LL  M+   ++PNA TY  L++G+ 
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +    +V  +  SM   G K D+  Y I+I    +++ +E A  +  E+   G+ P + 
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            Y++L  GL ++   E+A+ L  EM    +      Y   IDG C
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 711



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 6/346 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L   +  +G  PD +TY  L+    +       F +   +  S   PN  T+  +I GLC
Sbjct: 407 LLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLC 466

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
                 EA  L  ++ + G +PN   Y  LI G  + GH  +A    + MT  N      
Sbjct: 467 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN------ 520

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+   Y+ +I GL   G +++A+E + Q++   L P+  TY+ LIHG+C   +  +A 
Sbjct: 521 VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL +M++ G++PN  +   ++    K+   +  S +L  M+    +P+   Y  ++   
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
             +  +     +   +E  G   D   Y+ LI+G CK  ++E+A+ L +E+  +G++P +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           V YN L  G        RA  +F  +    +  +  TY   IDG C
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 7/282 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL    K+  ++ V S+ + +   G  PD + Y I+I    +   + + F++
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   P++  ++SLI GLC  + + +A  L  ++   G EP ++ YN LI+G CR
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 712

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A N+F  +      +     PN VTY+ +IDG CK G +  A +L+  M    +
Sbjct: 713 SGDISRARNVFDSI------LAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI 766

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  L  G   A D  +A  L  EM ++G   +V   + ++   CK G++    +
Sbjct: 767 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEK 825

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           LL +M+  ++ PNA T   ++  F   GK+     +F  ++ 
Sbjct: 826 LLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 81/166 (48%)

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +++ M D G+ P     N ++ +L +   M+   +L   M    + P+ +TY+T ++
Sbjct: 194 AAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLE 253

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C     +  K++F  M    C  ++ +YN++I+G C++  VEEA     E+   G+ P
Sbjct: 254 AHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSP 313

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              TY  L +GL +  + + A  L  EM  + +  +   Y T +DG
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 25/214 (11%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS------------------- 230
           P+   +  L    C A+ + +A GLL +M+     P +V +                   
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172

Query: 231 ------NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
                 +V+++   KNG +  A++++ +M    + P     N L+        +  V +L
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL 232

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              ME  G   D ++Y+  +  +CK ++ + A  ++ E+  +      VTYN +  GL  
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               E A     EM    ++ D  TY   ++GLC
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLC 326


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 44/371 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCF------------ 56
           PP+S F  +L  LA +  Y   LS  ++L+  G+ PDL+TY++LINCF            
Sbjct: 61  PPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFLDRV 120

Query: 57  ---------CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
                    CK+G+      +   +       +VV +T++I GLC +  + +A  L+T++
Sbjct: 121 SYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEM 180

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A    P+V TYN +I G C  G    A+ LF +M   N E       +  T++ ++   
Sbjct: 181 VAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVE------ADEYTFNTLVSAF 234

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           CKEG V + K +   M  E + P+++TY SL+ G+C   + ++AK +   MV +GV  NV
Sbjct: 235 CKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANV 294

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
            + N+     CK                 ++ P+   Y++L+DGFC +G+I +  EL   
Sbjct: 295 RTMNLFQEMHCK-----------------EIIPDTIAYSSLIDGFCKSGRIPQALELVDE 337

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G   +  +YN ++   CK   VE+ ++L  ++  KGI+P   TY  L +GLF+  +
Sbjct: 338 MHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGR 397

Query: 348 AERALKLFVEM 358
            E A ++F ++
Sbjct: 398 LEEAREIFPDL 408



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 177/348 (50%), Gaps = 45/348 (12%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN-------- 120
           F R+      P +  F  ++  L   +R   A +   KL   G +P++ TYN        
Sbjct: 51  FNRLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQ 110

Query: 121 -------------TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
                        TLINGLC+ G T  AL L KE+         + + + V Y+ II+GL
Sbjct: 111 LGHTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEK------IVQYDVVMYTAIINGL 164

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           CK+  VD A +L+ +M  + ++P+V TY ++I+GFC      +A GL  +M  + V+ + 
Sbjct: 165 CKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADE 224

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
            + N +++  CK G +     ++ +M++  V+P+  TYN+LMDG+CL  ++++ K +F +
Sbjct: 225 YTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNT 284

Query: 288 M---------------ESMGCKH---DDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           M               + M CK    D  +Y+ LI+G+CK+  + +AL L +E+  +G  
Sbjct: 285 MVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQP 344

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           P ++TYN++ + L +I   E+ + L  +++   +  D  TY    +GL
Sbjct: 345 PNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGL 392



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 38/246 (15%)

Query: 154 KPNTVTYSIIIDGLCKEG---FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
           KP+  TY+++I+   + G   F+D+                 V+Y +LI+G C   +   
Sbjct: 95  KPDLFTYNVLINCFSQLGHTHFLDR-----------------VSYETLINGLCKVGETRA 137

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  LL E+ ++ VQ +VV    I+N LCK+  +D+A  L   MV   V P+ FTYN ++ 
Sbjct: 138 ALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIY 197

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC+ G++     LF  M+    + D++++N L++ +CK   V E  ++   +  +G+KP
Sbjct: 198 GFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKP 257

Query: 331 TVVTYNTLFHGLFEIRQAERA------------------LKLFVEMQGNDVAADTCTYRT 372
            ++TYN+L  G   +++ ++A                  + LF EM   ++  DT  Y +
Sbjct: 258 DIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSS 317

Query: 373 FIDGLC 378
            IDG C
Sbjct: 318 LIDGFC 323



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P +  +  ++     +N ++ A     ++  +G++P++ + NV++N   + G      R+
Sbjct: 61  PPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFLDRV 120

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
                         +Y TL++G C  G+      L   +     ++D   Y  +ING CK
Sbjct: 121 --------------SYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCK 166

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           +K V++A  LY E+  K + P V TYN + +G   + + + A+ LF +M+  +V AD  T
Sbjct: 167 DKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYT 226

Query: 370 YRTFIDGLCVRPQVR 384
           + T +   C    VR
Sbjct: 227 FNTLVSAFCKEGNVR 241


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 185/367 (50%), Gaps = 8/367 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++ IL+  L ++   D+   ++  +   GL  D+  Y+ LI  FC++G+    +  +   
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGH 131
             S     + T+  + KGL     + EA  L  +L+    C P+ +T+ TLI+GLC  G+
Sbjct: 361 GFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + ++  N   E+ V       +YS +I+  CK+G    A E++  M  +   PN
Sbjct: 420 ANRAFEILEDARNSGEELDVF------SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
              Y +LI+GFC  +  N+A  + IEM   G  P +++ N +++ LCK  K   AS L  
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M++   +P+  TY +L+ G C   K++    ++  +   G + D   +NILI+G C   
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
           +V+EA  +Y E+  K   P +VTYNTL  G +EI   ++A  L+  +  N +  D  TY 
Sbjct: 594 KVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYN 653

Query: 372 TFIDGLC 378
           T I GLC
Sbjct: 654 TRIKGLC 660



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 188/410 (45%), Gaps = 46/410 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-----PDLYTYSILINCFCKMGQVS 63
           P V S N LL    + + Y    + F  L S G F     P+L TY+I++   C  G V 
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASL-SHGAFGRRIAPNLQTYNIILRSLCARGDVD 175

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  + R   AP+ VT+++L+ GL    ++  A  L  ++  +G + + + YN L+
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +G  RTG    A+ +++++    G       PN  TY +++DGLCK G   +A E++ +M
Sbjct: 236 SGCFRTGMFEKAMKVWEQLVRDPGA-----SPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              N   + VTY  LIHG C + D + A  +  +MV  G+  +V   N ++   C+ G+ 
Sbjct: 291 MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350

Query: 244 DNASRLLD-------------------------------LMVQCD----VRPNAFTYNTL 268
             A +  D                               L+ Q +      P+  T+ TL
Sbjct: 351 GEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTL 410

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G C  G  NR  E+     + G + D FSY+ +IN +CK+    +A  +Y  +   G 
Sbjct: 411 IHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGC 470

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KP    YN L +G   + +   A+K+++EM  N       TY T IDGLC
Sbjct: 471 KPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 7/335 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           ++++NI+   L  +        L K+L N     PD  T+  LI+  C+ G  +  F I 
Sbjct: 368 ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEIL 427

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                S    +V +++S+I   C + R  +A  ++  +   GC+PN   YN LING CR 
Sbjct: 428 EDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRV 487

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A+ ++ EMT+ NG       P  +TY+ +IDGLCK     +A  L  +M      
Sbjct: 488 SKINDAIKIYIEMTS-NGCC-----PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P++ TY SLI G C     + A  +  E++D G+Q +V+  N++++ LC  GK+D A  +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M + +  PN  TYNTLMDGF   G I++   L+ ++   G K D  +YN  I G C 
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
                E + L NE+   GI PTV+T++ L   + +
Sbjct: 662 CNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 5/280 (1%)

Query: 100 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           A A F  L +  GC P V ++NTL++   R      A   F  +++G    G    PN  
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG--AFGRRIAPNLQ 159

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           TY+II+  LC  G VD+A  LF  ++   + P+ VTY++L+ G    +  + A  LL EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTYNTLMDGFCLTGK 277
            + GVQ + V  N +++   + G  + A ++ + +V+     PN  TY  ++DG C  G+
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                E++  M +   + D  +Y ILI+G C++ +V+ A  +Y+++   G+   V  YN+
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L  G  E+ +   A K F +  G        TY     GL
Sbjct: 340 LIKGFCEVGRTGEAWK-FWDSTGFSGIRQITTYNIMTKGL 378



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 144/269 (53%), Gaps = 6/269 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S++ ++    K+        ++K +   G  P+ + Y+ LIN FC++ +++    I+ 
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  +   P ++T+ +LI GLC   +  EA++L  ++   G +P++ TY +LI GLCR  
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              VAL ++ E+ +   ++ V+       ++I+I GLC  G VD+A  ++L+MK +N +P
Sbjct: 559 KVDVALRIWDEILDAGLQVDVM------VHNILIHGLCSAGKVDEAFCIYLEMKEKNCSP 612

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+VTY +L+ GF      ++A  L   ++D G++P++V+ N  +  LC   +      LL
Sbjct: 613 NLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLL 672

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + ++   + P   T++ L+      G I 
Sbjct: 673 NEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 5/162 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC----DVRPNAFTYNTLMDGFCLTGK 277
           G  P V S N +++   +  +  +A      +        + PN  TYN ++   C  G 
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++R   LF S+   G   D  +Y+ L++G  K+ +++ AL L +E+P  G++   V YN 
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAA-DTCTYRTFIDGLC 378
           L  G F     E+A+K++ ++  +  A+ +  TY+  +DGLC
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF----KGIKPTVVTYNTLFHGLFEIR 346
           +GC     S+N L++ + + +   +A + +  L      + I P + TYN +   L    
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +RA+ LF  ++   VA D  TY T + GL    Q+
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQL 209


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 181/335 (54%), Gaps = 9/335 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+  L        V++LF+R     ++ PD+++++++I   C++GQV     +  R
Sbjct: 220 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 279

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTG 130
           +     +P+ VT   ++ GLC  + +     +  +L+  G C PNV+T+ ++I+G C+ G
Sbjct: 280 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+ ++ +M            PNTVTY+++I+G  K G +  A E++ QM      P
Sbjct: 340 KLEDAMAVYNDMVASG------IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 393

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT++SLI G+C     ++A  +  +M    +QPNV + ++I++ LCK  + D A  LL
Sbjct: 394 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLL 453

Query: 251 -DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +L ++ D+ P AF YN ++D  C  GK++    +   ME  GC+ D ++Y ILI GYC 
Sbjct: 454 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCM 513

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              + EA+  ++E+   G  P  +T N     L +
Sbjct: 514 KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 548



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN+++  + +       L L +R+N  G  PD  T++I+++  C+  +VS G  +
Sbjct: 252 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 311

Query: 69  FGRILRS--CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
             R+ R   C  PNVVTFTS+I G C   ++ +A A++  + A G  PN +TYN LING 
Sbjct: 312 LRRLQRDGVCM-PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 370

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G    A+ ++++MT       +   P+ VT+S +IDG C+ G +D A  ++  M   
Sbjct: 371 GKVGDLGSAVEVYQQMTR------LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 424

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDN 245
            + PNV T++ +IH  C  N  +EA  LL E+ +   + P     N +++ LCK GK+D 
Sbjct: 425 RIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 484

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+ +   M +   RP+ +TY  L+ G+C+  +I+     F  M   GC  D  + N  I+
Sbjct: 485 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 544



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 13/355 (3%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTS 86
           D   +L  + +  G   + Y Y+ L++     G+V     +F R ++   ++P+V +F  
Sbjct: 200 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 259

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +IKG+C   ++ +A  L  ++  FGC P+ +T+N +++GLCRT        + + +    
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                V  PN VT++ +I G CK G ++ A  ++  M    + PN VTY  LI+G+    
Sbjct: 320 -----VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVG 374

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
           D   A  +  +M      P+VV+ + +++  C+ G++D+A R+   M Q  ++PN +T++
Sbjct: 375 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 434

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHD----DFSYNILINGYCKNKEVEEALSLYNE 322
            ++   C   K NR  E    +  +  + D     F YN +I+  CK  +V+EA  +   
Sbjct: 435 IIIHSLC---KQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 491

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  KG +P   TY  L  G     +   A+  F EM     + D+ T   FI  L
Sbjct: 492 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCL 546



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 4   MHPSP----PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCK 58
           +H SP    P   S   ++  L ++      L LF ++ +  G  PD    S L++    
Sbjct: 136 LHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTC 195

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVI 117
              +     +  +            +  L+  L    R+ +  ALF + ++     P+V 
Sbjct: 196 ANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVW 255

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++N +I G+CR G    AL L + M     E G    P+TVT++II+DGLC+   V +  
Sbjct: 256 SFNVVIKGVCRVGQVQKALELVERMN----EFGC--SPDTVTHNIIVDGLCRTNEVSRGH 309

Query: 178 ELFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           E+  +++ + +  PNVVT+TS+I G+C A    +A  +  +MV  G+ PN V+ NV++N 
Sbjct: 310 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 369

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
             K G + +A  +   M +    P+  T+++L+DG+C  G+++    ++  M     + +
Sbjct: 370 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 429

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            ++++I+I+  CK    +EA+ L NEL  +  I P    YN +   L +  + + A  + 
Sbjct: 430 VYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 489

Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             M+      D  TY   I G C++ ++
Sbjct: 490 KGMEEKGCRPDKYTYTILIIGYCMKSRI 517


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 194/405 (47%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG--- 65
           P V +F  L+    K    D    LFK +   G+ PDL  YS LI+ + K G + +G   
Sbjct: 176 PNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKL 235

Query: 66  --------------------------------FVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                           F ++ R+L    +PNVVT+T LIKGLC 
Sbjct: 236 FSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQ 295

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + RI EA  ++ ++   G EP+V+TY++LI+G C+ G+      L+++M      I + +
Sbjct: 296 DGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDM------IKMGY 349

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V Y +++DGLCK+G +  A    ++   +++ PNVV + SLI G+C  N  +EA  
Sbjct: 350 PPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALK 409

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M   G++P+V +   +M      G++     L   M +  + P+A  + TLMD FC
Sbjct: 410 VFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFC 469

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K     +LF  M+      D    N++IN   K + VEEA   +N L    ++P +V
Sbjct: 470 KNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIV 529

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNT+  G   +R+ + A ++F  ++      +  T    I  LC
Sbjct: 530 TYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLC 574



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 177/373 (47%), Gaps = 41/373 (10%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P++ T+  LIN FCK G++   F +F  + +   AP+++ +++LI G      +   
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMG 232

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             LF++    G + +V+ +++ I+   + G+   A +++K M            PN VTY
Sbjct: 233 HKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQG------ISPNVVTY 286

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +I+I GLC++G + +A  ++ Q+    L P+VVTY+SLI GFC   +      L  +M+ 
Sbjct: 287 TILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIK 346

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN- 279
            G  P+VV   V+++ LCK G M +A R     +   +RPN   +N+L+DG+C   + + 
Sbjct: 347 MGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDE 406

Query: 280 -------------------------------RVKE---LFVSMESMGCKHDDFSYNILIN 305
                                          R+KE   LF  M  MG + D  ++  L++
Sbjct: 407 ALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMD 466

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN +    L L++ +    I   +   N + + LF+ +  E A K F  +    +  
Sbjct: 467 AFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEP 526

Query: 366 DTCTYRTFIDGLC 378
           D  TY T I G C
Sbjct: 527 DIVTYNTMICGYC 539



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 175/392 (44%), Gaps = 33/392 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L ++        ++ ++   GL P + TYS LI+ FCK G +  GF +
Sbjct: 281 PNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFAL 340

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++  + P+VV +  L+ GLC +  ++ A     K       PNV+ +N+LI+G CR
Sbjct: 341 YEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCR 400

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL +F+ M    G  G+  KP+  T + ++     EG + +   LF +M    L
Sbjct: 401 LNRCDEALKVFRLM----GIYGI--KPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGL 454

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V + +L+  FC          L   M    +  ++   NV++N L K   ++ AS+
Sbjct: 455 EPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASK 514

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI---- 304
             + +++  + P+  TYNT++ G+C   +++    +F  ++      +  +  ILI    
Sbjct: 515 FFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLC 574

Query: 305 -----------------------NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
                                  +G CK   V+EA +++++     I P VV Y  L  G
Sbjct: 575 KNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRG 634

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             ++ +   A  L+  M  N V  D    R  
Sbjct: 635 CCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 22/323 (6%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
            C+ G V  G    G +L + F    VT     K L     ++E           G   +
Sbjct: 99  LCRGGTVPFGVSAHGFVLDALFRKGEVT-----KALDFHRLVMER----------GFRVD 143

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           +++ N ++ GL      + +  L   +  G         PN VT+  +I+G CK G +D+
Sbjct: 144 IVSCNKILKGLSVDQIEVASRMLSLVLDCGPA-------PNVVTFCTLINGFCKRGEMDR 196

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A ELF  M+   + P+++ Y++LI G+  A        L  + + +GV+ +VV  +  ++
Sbjct: 197 AFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 256

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
              K G +  A  +   M+   + PN  TY  L+ G C  G+I     ++  +   G + 
Sbjct: 257 VYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEP 316

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
              +Y+ LI+G+CK   +    +LY ++   G  P VV Y  L  GL +      AL+  
Sbjct: 317 SVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFS 376

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
           V+  G  +  +   + + IDG C
Sbjct: 377 VKTLGQSIRPNVVVFNSLIDGWC 399



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            +  ++D L ++G V KA +    +       ++V+   ++ G    +    A  +L  +
Sbjct: 111 AHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRMLSLV 169

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +D G  PNVV+   ++N  CK G+MD A  L  +M Q  + P+   Y+TL+DG+   G +
Sbjct: 170 LDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGML 229

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               +LF      G K D   ++  I+ Y K   +  A  +Y  +  +GI P VVTY  L
Sbjct: 230 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTIL 289

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             GL +  +   A  ++ ++    +     TY + IDG C    +R  +A
Sbjct: 290 IKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFA 339



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M    P  P   +  IL+  L KN   D  L +              +YSI+I+  CK G
Sbjct: 553 MLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSII--------SYSIIIDGLCKRG 604

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     IF + + +   P+VV +  LI+G C   R+VEAA L+  +   G +P+ +   
Sbjct: 605 RVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQR 664

Query: 121 TL 122
            L
Sbjct: 665 AL 666


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 181/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K +++  V   +K +   G  P LY ++IL++ FCK G++ L
Sbjct: 95  HKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             ++F  I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  +  EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDEANEMLNEMLD-NGLV-----PNGVTFTTLIDGHCKNGKVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +   P+++TY +LI+G C   D  +A+ L+ EM+ +G++P+ ++   +++  CK G ++
Sbjct: 269 SQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               L   M++ ++R +  TY  L+ G C  G+    +++   M ++G K D+ +Y +++
Sbjct: 329 ITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIM 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V+ A  L  E+   G  P VVT
Sbjct: 389 NEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 6/304 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   + P++  F  L+   C E  +  A  +F  +  +   P+V+
Sbjct: 113 KLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   +  G      +P+  TYS++I+GLCKE  +D+A 
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRL-KSAMHATG-----VQPDVYTYSVLINGLCKESKMDEAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E+  +M    L PN VT+T+LI G C     + A  +  +M+ QG  P++++ N ++  L
Sbjct: 227 EMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C+ G +  A  L++ M+   ++P+  TY TL+DG C  G +    EL   M     + D+
Sbjct: 287 CRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDE 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +    + A KL  E
Sbjct: 347 VTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLRE 406

Query: 358 MQGN 361
           MQ N
Sbjct: 407 MQRN 410



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 131/247 (53%), Gaps = 11/247 (4%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           + P+   ++I++   CKEG +  A+ +F  +   +L P+VV++ +L++G+    D +E  
Sbjct: 132 YPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   M   GVQP+V + +V++N LCK  KMD A+ +L+ M+   + PN  T+ TL+DG 
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK++   E++  M S G   D  +YN LI G C+  ++ +A  L  E+  KG+KP  
Sbjct: 252 CKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDK 311

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
           +TY TL  G  +    E   +L   M   ++  D  TY   I GLC           R+G
Sbjct: 312 ITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLC-----------REG 360

Query: 393 NSGNTNR 399
            +G+  +
Sbjct: 361 RAGDAEK 367



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 6/274 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  P++  +N L++  C+ G   +A  +F  +T  +       +P+ V+++ +++G  + 
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWS------LRPSVVSFNTLMNGYIRL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  +EA  +L EM+D G+ PN V+ 
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNGK+D A  +   M+     P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E    L   +  + I+   VTY  L  GL    +A  
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           A K+  EM    +  D  TY   ++  C    V+
Sbjct: 365 AEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVK 398



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 12/275 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGE--IGVVF------KPNTVTYSIIIDGL-- 167
           +Y T+I+ LC     + A +L + + +  G+     VF      K   ++   +  GL  
Sbjct: 15  SYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFSGLML 74

Query: 168 --CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GFV  A + F   K   +     T   ++        +    G   E+++ G  P
Sbjct: 75  AYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPP 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G+M  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++EA  + NE+   G+ P  VT+ TL  G  + 
Sbjct: 195 SAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            + + A++++ +M       D  TY T I GLC R
Sbjct: 255 GKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRR 289



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 70/131 (53%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C   P+ + +N LM  FC  G++   + +F ++     +    S+N L+NGY +  +
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD 186

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G++P V TY+ L +GL +  + + A ++  EM  N +  +  T+ T
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246

Query: 373 FIDGLCVRPQV 383
            IDG C   +V
Sbjct: 247 LIDGHCKNGKV 257


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 192/372 (51%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSL--FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + + N +L  LA++       SL  F  L ++ L P+ YT+++L++  C  G ++   
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
               ++     +P+ VT+ +L+   C +  + EA  L  ++K  G  P   TYNTL++  
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            R G    A ++ + MT         F+P+  TY+++  GLC+ G VD+A +L  +M+  
Sbjct: 290 ARLGWIKQATDVVEAMT------AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL 343

Query: 187 NL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            + +P+VVTY +L+         ++A  LL EM ++GV+ ++V+ N+I+  LC+ G+++ 
Sbjct: 344 GIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEE 403

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A   L++M +  + P+  TYNTL+D  C  G + +   L   M   G K D F+ N L+ 
Sbjct: 404 ALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 463

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             CK K  EEA  L    P +G  P  V+Y T+    F+  + E AL L+ EM    +  
Sbjct: 464 NLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTP 523

Query: 366 DTCTYRTFIDGL 377
              TY T I GL
Sbjct: 524 SISTYNTLIKGL 535



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 194/406 (47%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N LL    +        +L  R+   G+ P   TY+ L++ + ++G +     +
Sbjct: 242 PDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
              +    F P++ T+  L  GLC   ++ EA  L  +++  G   P+V+TYNTL++   
Sbjct: 302 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACF 361

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   +  ALNL +EM     E GV  K + VT++II+ GLC+EG +++A      M  E 
Sbjct: 362 KCQRSSDALNLLEEMR----EKGV--KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG 415

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+V+TY +LI   C A +  +A  L+ EMV  G++ +  + N ++  LCK  + + A 
Sbjct: 416 LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAE 475

Query: 248 RLL-----------------------------------DLMVQCDVRPNAFTYNTLMDGF 272
            LL                                   D M++  + P+  TYNTL+ G 
Sbjct: 476 ELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              GK+    +    +  MG   DD +YNI+I+ YCK  ++E+A   +N++     KP V
Sbjct: 536 STMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDV 595

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VT NTL +GL    + E+A+KLF          D  TY T I  LC
Sbjct: 596 VTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALC 641



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 30/377 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N+L   L +    D    L   +  +G+  PD+ TY+ L++   K  + S    
Sbjct: 312 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALN 371

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +       ++VT   ++KGLC E ++ EA      +   G  P+VITYNTLI+  C
Sbjct: 372 LLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASC 431

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTV 158
           + G+   A  L  EM     ++                                F P+ V
Sbjct: 432 KAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEV 491

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y  ++    KE   + A  L+ +M    L P++ TY +LI G        EA   L E+
Sbjct: 492 SYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNEL 551

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           ++ G+ P+  + N+I++  CK G ++ A +  + MV+   +P+  T NTLM+G CL G++
Sbjct: 552 MEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRL 611

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +  +LF S    G K D  +YN LI   CK+ +V+ AL  + ++  +G++P V TYN L
Sbjct: 612 EKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVL 671

Query: 339 FHGLFEIRQAERALKLF 355
              L E  ++  A K+ 
Sbjct: 672 LSALSEAGRSVEAQKML 688



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 175/382 (45%), Gaps = 25/382 (6%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++  L +    +  L   + +   GL PD+ TY+ LI+  CK G V+  FV+   +
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +RS    +  T  +L+  LC E R  EA  L       G  P+ ++Y T++    +    
Sbjct: 447 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKP 506

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L+ EM      I     P+  TY+ +I GL   G + +A +   ++    L P+ 
Sbjct: 507 EPALCLWDEM------IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD 560

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY  +IH +C   D  +A     +MV+   +P+VV+ N +MN LC  G+++ A +L + 
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK-NK 311
            V+   + +  TYNTL+   C    ++     F  ME  G + D F+YN+L++   +  +
Sbjct: 621 WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680

Query: 312 EVE---------EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
            VE         E+  LY    +  IK +V    T           +  +K  +E  GN 
Sbjct: 681 SVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVET---------GKDPEVKSDIESVGNT 731

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
              D  +Y  +I  LC+  Q++
Sbjct: 732 QGDDQESYNKYIKELCIGGQLK 753



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 10/283 (3%)

Query: 100 AAALFTKLKAFGC-EPNVITYNTLINGLCRTGHTI--VALNLFKEMTNGNGEIGVVFKPN 156
           AA L    +  GC  P++   N +++ L R+  T    +L+ F  +      I +   PN
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSL------IALRLHPN 208

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             T+++++   C +G +  A     +M+   L+P+ VTY +L++  C      EA+ LL 
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            M  +G+ P   + N +++   + G +  A+ +++ M      P+ +TYN L  G C  G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328

Query: 277 KINRVKELFVSMESMGCKHDD-FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           K++   +L   ME +G    D  +YN L++   K +   +AL+L  E+  KG+K ++VT+
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N +  GL    Q E AL     M    +  D  TY T ID  C
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASC 431



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 1/203 (0%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN  T+  L+H  C      +A   L +M   G+ P+ V+ N ++N  C+ G +  A 
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  + P   TYNTL+  +   G I +  ++  +M + G + D ++YN+L  G 
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324

Query: 308 CKNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           C+  +V+EA  L +E+   GI  P VVTYNTL    F+ +++  AL L  EM+   V + 
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384

Query: 367 TCTYRTFIDGLCVRPQVRFTYAR 389
             T+   + GLC   Q+     R
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGR 407



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 42/300 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+  ++    K    +  L L+  +    L P + TY+ LI     MG+++     
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+  T+  +I   C E  + +A     K+     +P+V+T NTL+NGLC 
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF+       ++ V+      TY+ +I  LCK+  VD A   F  M+   L
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVI------TYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLL---------------------IEMVDQGVQPNV 227
            P+V TY  L+     A    EA+ +L                     +E V+ G  P V
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 228 VSS---------------NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            S                N  + ELC  G++  A  +LD M+Q  +  +  TY TLM+G 
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 48/273 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S++N L+  L+        +     L  +GL PD  TY+I+I+ +CK G +   F  
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF------------------------ 104
             +++ + F P+VVT  +L+ GLC   R+ +A  LF                        
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642

Query: 105 -----TKLKAF------GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                T L+ F      G +P+V TYN L++ L   G ++ A  +  ++       G  F
Sbjct: 643 DNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFF 702

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL----NPNVVTYTSLIHGFCHANDWN 209
            P ++  S+          V+  K+  ++   E++      +  +Y   I   C      
Sbjct: 703 YP-SIKSSV--------EAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLK 753

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           EAK +L EM+ +G+  +  +   +M  L K  K
Sbjct: 754 EAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 29/409 (7%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + ++NIL               + +R+   GL PDL TY+ILI   C+MG +  
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +  ++L      ++VT+T L+  LC   RI EA  L  +++  G +P+++TY+ LI+
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453

Query: 125 GLCRTGHTIVALNLFKEM---------------TNGNGEIGVVFKPN------------- 156
           GLC+ G    A+ L++EM                +G  E G + +               
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 513

Query: 157 -TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
             + Y+I+IDG  K G + +A   + Q+  + ++P +VT+ SLI+GFC      EA  LL
Sbjct: 514 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 573

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             +   G+ P  V+   +MN  C+ G M +   +L  M    ++P   TY  ++ G C  
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+++   +L   M + G   D  +YN +I  +CK  ++++A  L+N++    ++P+ VTY
Sbjct: 634 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 693

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           N L +GL      + A +L V +Q   +      Y T I   C +  V+
Sbjct: 694 NVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 742



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 41/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+NILL  L      +  L     + + G+ PD+ TY+IL N F  +G +S  + +
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R+L +   P++VT+T LI G C    I E+  L  K+ + G + +++TY  L++ LC+
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A+ L  EM      IG+  KP+ +TYS++I GLCK G V++A EL+ +M  + +
Sbjct: 423 SGRIDEAVILLHEME----VIGL--KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRI 476

Query: 189 NPN-----------------------------------VVTYTSLIHGFCHANDWNEAKG 213
            PN                                   ++ Y  +I G+    +  EA  
Sbjct: 477 YPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 536

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              +++++G+ P +V+ N ++   CK GK+  A +LLD +    + P + TY TLM+G+C
Sbjct: 537 SYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G ++ + ++   ME+   K    +Y +++ G CK   + E++ L   +  +G+ P  +
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           TYNT+     +    ++A +L  +M  + +     TY   I+GLCV
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCV 702



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 196/403 (48%), Gaps = 44/403 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           ++++N LL  L   +H D +  ++  + + G+  + YT  ILI+  C+  ++        
Sbjct: 203 IATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR 259

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                 F P+VV+F +L+ G C    +  A + F  +  +G  P+V +YN L++GLC  G
Sbjct: 260 ETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAG 319

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL    +M N   E      P+ VTY+I+ +G    G +  A ++  +M    LNP
Sbjct: 320 SMEEALEFTNDMENHGVE------PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNP 373

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++VTYT LI G C   +  E+  L  +M+ QG++ ++V+  V+++ LCK+G++D A  LL
Sbjct: 374 DLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL 433

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS----------- 299
             M    ++P+  TY+ L+ G C  G +    EL+  M S     + F            
Sbjct: 434 HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEK 493

Query: 300 ------------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
                                   YNI+I+GY K   + EA+  Y ++  KGI PT+VT+
Sbjct: 494 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 553

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N+L +G  +  +   A+KL   ++ + +   + TY T ++G C
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 177/370 (47%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++ +LL  L K+   D  + L   +  IGL PDL TYS+LI+  CK G V     ++ 
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN    +++I GL  +  I EA   F  +        +I YN +I+G  + G
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A+  +K++     E G+   P  VT++ +I G CK+G + +A +L   +K   L P
Sbjct: 530 NIGEAVRSYKQII----EKGI--SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
             VTYT+L++G+C   D +    +L EM  + ++P  ++  V++  LCK G++  + +LL
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+  TYNT++  FC    + +  +L   M     +    +YN+LING C  
Sbjct: 644 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVY 703

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +++A  L   L  + I+ T V Y T+          + AL  F +M           Y
Sbjct: 704 GNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDY 763

Query: 371 RTFIDGLCVR 380
              I+ LC R
Sbjct: 764 SAVINRLCKR 773



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 6/297 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           F  +    +  ++  Y+I+I+ + K+G +      + +I+    +P +VTF SLI G C 
Sbjct: 503 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 562

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + ++ EA  L   +K  G  P  +TY TL+NG C  G      ++  EM           
Sbjct: 563 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME------AKAI 616

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           KP  +TY++++ GLCKEG + ++ +L   M    L P+ +TY ++I  FC A+D  +A  
Sbjct: 617 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 676

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  +M+   +QP+ V+ NV++N LC  G + +A RLL  +    +R     Y T++   C
Sbjct: 677 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 736

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             G +      F  M   G +     Y+ +IN  CK   + +A   +  +   GI P
Sbjct: 737 AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 793



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 178/364 (48%), Gaps = 11/364 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY-SILINCFCKMGQVSLGFVIFGRI 72
           +++L    ++ +     L +  ++  + L   + TY S+L N    +    + + ++  I
Sbjct: 171 WDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYN----LRHTDIMWDVYNEI 226

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S    N  T   LI GLC +SR+ +A     +       P+V+++N L++G C+ G  
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            VA + F  M      I     P+  +Y+I++ GLC  G +++A E    M+   + P++
Sbjct: 287 DVAKSFFCMM------IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY  L +GF      + A  ++  M+  G+ P++V+  +++   C+ G ++ + +L + 
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   ++ +  TY  L+   C +G+I+    L   ME +G K D  +Y++LI+G CK   
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           VEEA+ LY E+  K I P     + +  GLFE      A   F  +  +DVA +   Y  
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 373 FIDG 376
            IDG
Sbjct: 521 MIDG 524



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 12/296 (4%)

Query: 92  CAESR---IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           CA SR   + +A  +  K+K    + ++ TYN+L+  L    HT +  +++ E+      
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKAS--- 229

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            GV    N  T  I+IDGLC++  +  A     +   E   P+VV++ +L+ GFC     
Sbjct: 230 -GV--PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           + AK     M+  G+ P+V S N++++ LC  G M+ A    + M    V P+  TYN L
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
            +GF + G I+   ++   M   G   D  +Y ILI G+C+   +EE+  L  ++  +G+
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           K ++VTY  L   L +  + + A+ L  EM+   +  D  TY   I GLC R  V 
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND----WNEA 211
           N V + ++     +   V  A  +  +MK  NL  ++ TY SL++   H +     +NE 
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           K         GV  N  ++ ++++ LC+  ++ +A   L      +  P+  ++N LM G
Sbjct: 227 KA-------SGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           FC  G ++  K  F  M   G   D +SYNIL++G C    +EEAL   N++   G++P 
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +VTYN L +G   +     A K+   M  N +  D  TY   I G C
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 114/257 (44%), Gaps = 6/257 (2%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +H   P   ++  L+    +     ++  +   + +  + P   TY++++   CK G++ 
Sbjct: 578 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 637

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +   +      P+ +T+ ++I+  C    + +A  L  ++     +P+ +TYN LI
Sbjct: 638 ESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLI 697

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           NGLC  G+   A  L   + + +       +   V Y+ II   C +G V  A   F QM
Sbjct: 698 NGLCVYGNLKDADRLLVTLQDQS------IRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                  ++  Y+++I+  C  N   +AK     M+  G+ P+     V++N   ++G  
Sbjct: 752 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 811

Query: 244 DNASRLLDLMVQCDVRP 260
           ++   +  +M++C + P
Sbjct: 812 NSVFEIFAMMIKCGLLP 828


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K +++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 83  HKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 142

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 202

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 203 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 256

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D N+A GL+ EM  +G++P+  +   +++  CK G +D
Sbjct: 257 SQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 316

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  ++ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 317 AAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMII 376

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+V TYN L +G
Sbjct: 377 NEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 101 KLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 160

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 161 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDDAN 214

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 274

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G ++ A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 275 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 334

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  +I+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 335 VAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 394

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N       TY   ++G
Sbjct: 395 MQRNGHVPSVXTYNVLMNG 413



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++ +A  L +E+  KG+KP   TY TL 
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 307 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLC 345



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 172

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G +N+   L   M  
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  +  GL +  +   
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVD 352

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 353 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 385



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 130 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 189

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 249

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +     +A  L  EM    +  D  TY T IDG 
Sbjct: 250 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGC 309

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 310 CKEGDLDAAFEHRK 323



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 12/275 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 3   SYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 62

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 63  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPA 122

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 183 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            + + A++++ +M    +  D  TY T I GLC +
Sbjct: 243 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 277



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C    + + +N LM  FC  G I   + +F ++   G +    SYN L+NGY +  +
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G++P V TY+ L +GL +  + + A +LF EM    +  +  T+ T
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 373 FIDGLCVRPQV 383
            IDG C   +V
Sbjct: 235 LIDGHCKNGRV 245


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL C  + K    V  L + + + G+   + TY+IL++     G +S    +   + 
Sbjct: 170 YNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMK 229

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
               A +V  +T++I   C    +  A+ +F +    G EPN  TY  LING C+ G   
Sbjct: 230 AKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQME 289

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  +M  G G        N + ++ +IDG C++G VD A ++   M+   +  +V 
Sbjct: 290 AAEMLLADM-QGRG-----VGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVY 343

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L  G C  N   EAK LL  M+++GV PN V+   +++  CK G M  A RL   M
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM 403

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
                 P+  TYN +MDG+   G I   +     ME  G   D ++Y  L++G+C N +V
Sbjct: 404 AGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKV 463

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + AL L+ E+  +G +P VV Y  L  GL +  ++E A +L+ +M    +  D   Y   
Sbjct: 464 DVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSAL 523

Query: 374 IDGL 377
           +  L
Sbjct: 524 VGSL 527



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 163/332 (49%), Gaps = 6/332 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++ IL+  L+       V ++   + +  +  D+Y Y+ +IN +C+ G V     +F 
Sbjct: 202 VGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFD 261

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             + +   PN  T+  LI G C   ++  A  L   ++  G   N I +NT+I+G CR G
Sbjct: 262 ECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQG 321

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL +   M     E+ V       TY+ +  GLC+   + +AK L   M  + + P
Sbjct: 322 MVDNALKVKAAMEKMGIELDV------YTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTYT+LI   C   D  EA+ L  EM  +G  P+VV+ NV+M+   K G +  A R  
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  + P+ +TY +L+ G C+ GK++   +LF  M+  G + +  +Y  LI+G  K 
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKE 495

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
              EEA  LY+++   G+ P    Y+ L   L
Sbjct: 496 GRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 162/335 (48%), Gaps = 11/335 (3%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVT---FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           GQ++    I  R L SC  P  V+    + ++ G C   R+ +A AL  ++   G   N 
Sbjct: 110 GQLADAAAILTRALGSC--PGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNA 167

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN+L++   R         L + M NG  E  V       TY+I++D L   G + K 
Sbjct: 168 LCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVG------TYTILVDSLSTAGDISKV 221

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + +  +MK +N+  +V  YT++I+ +C A +   A  +  E V  G++PN  +  V++N 
Sbjct: 222 EAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLING 281

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+M+ A  LL  M    V  N   +NT++DG+C  G ++   ++  +ME MG + D
Sbjct: 282 FCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELD 341

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            ++YN L  G C+   + EA +L + +  KG+ P  VTY TL     +      A +LF 
Sbjct: 342 VYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFR 401

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           EM G        TY   +DG   +  +R     RK
Sbjct: 402 EMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRK 436



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 6/261 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+    K    +    L   +   G+  +   ++ +I+ +C+ G V     +
Sbjct: 270 PNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKV 329

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     +V T+ +L  GLC  +R+ EA  L   +   G  PN +TY TLI+  C+
Sbjct: 330 KAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCK 389

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  LF+EM  G G +     P+ VTY++++DG  K+G + +A+    +M+ + L
Sbjct: 390 EGDMVEARRLFREMA-GKGAM-----PSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V TY SL+HG C     + A  L  EM  +G +PNVV+   +++ L K G+ + A +
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQ 503

Query: 249 LLDLMVQCDVRPNAFTYNTLM 269
           L D M++  + P+   Y+ L+
Sbjct: 504 LYDDMLKAGLTPDDSLYSALV 524



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 6/231 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    +    D  L +   +  +G+  D+YTY+ L    C++ +++    +   ++
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN VT+T+LI   C E  +VEA  LF ++   G  P+V+TYN +++G  + G   
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A    KEM       G+V  P+  TY+ ++ G C  G VD A +LF +MK+    PNVV
Sbjct: 430 EAERFRKEMEKK----GLV--PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVV 483

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            YT+LI G        EA  L  +M+  G+ P+    + ++  L  + + D
Sbjct: 484 AYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 6/160 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+    K         LF+ +   G  P + TY+++++ + K G +     
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
               + +    P+V T+ SL+ G C   ++  A  LF ++K  G EPNV+ Y  LI+GL 
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           + G +  A  L+ +M            P+   YS ++  L
Sbjct: 494 KEGRSEEAFQLYDDMLKAG------LTPDDSLYSALVGSL 527


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+  TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK+G VD A E++ +M 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKKGRVDLAMEIYKRML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EMV +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDXYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A+ L+D MV   ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  +L  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N       TY   ++G
Sbjct: 413 MQRNGHVPSVVTYNVLMNG 431



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+  + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+  TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CK G++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 403



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CK   V+ A+
Sbjct: 208 VQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN---------GNGEIGVV 152
           + FT L +    P+  T+   ++  C   H +    +F E  +         G G    V
Sbjct: 2   SFFTWLSS----PSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAV 57

Query: 153 F----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
           F          + +   +S +I    + GF+  A E +   +   L     T   ++   
Sbjct: 58  FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHL 117

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                +    G   E+++ G   ++   N++M+  CK+G +  A  + D + +  +RP+ 
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            +YNTLM+G+   G ++    L  +M + G + D ++Y++LING CK  ++++A  L++E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDE 237

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           +  KG+ P  VT+ TL  G  +  + + A++++  M    +  D  TY T I GLC +  
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 383 VR 384
           ++
Sbjct: 298 LK 299


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+L+  L ++   +      K +   GL PD +TY  LIN  CK  + +    +   +
Sbjct: 281 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 340

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   PNVV + +LI G   E    EA  +  ++ A G +PN ITY+ L+ GLC+ G  
Sbjct: 341 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 400

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L K+M   +       +P+T+TY++II+G  +      A  L  +M+   ++PNV
Sbjct: 401 DRASLLLKQMVRDS------HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 454

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY+ +IHG C + +  +A  LL EM  +G++PN      +++  C+ G +  A  + D 
Sbjct: 455 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 514

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + +V P+ + YN+L+ G    G++    + F  M+  G   ++F+Y+ LI+GY KN +
Sbjct: 515 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 574

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E A  L   +   G+KP  V Y  L    F+    E+    F  M    V  D   Y  
Sbjct: 575 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 634

Query: 373 FIDGL 377
            I  L
Sbjct: 635 LIHNL 639



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N LL  L +      +  + + +   G+ PD+YTYS LI  +CK+ +      +
Sbjct: 207 PSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N VT+  LI GLC    + EA      ++ +G  P+  TY  LINGLC+
Sbjct: 267 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 326

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +  +  A  L  EM+          KPN V Y+ +IDG  +EG  D+A ++  +M    +
Sbjct: 327 SRRSNEAKALLDEMSCAE------LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY +L+ G C     + A  LL +MV    +P+ ++ N+I+    ++    +A R
Sbjct: 381 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 440

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    + PN +TY+ ++ G C +G+  +  +L   M + G K + F Y  LI+GYC
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V  A  +++++    + P +  YN+L  GL ++ + E + K F +MQ   +  +  
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560

Query: 369 TYRTFIDG 376
           TY   I G
Sbjct: 561 TYSGLIHG 568



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K + +DT   +   +   G   +  TY++LI   C+ G V   F  
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  T+ +LI GLC   R  EA AL  ++     +PNV+ Y  LI+G  R
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + KEM      +    +PN +TY  ++ GLCK G +D+A  L  QM  ++ 
Sbjct: 362 EGNADEAFKMIKEM------VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY  +I G    +   +A  LL EM + G+ PNV + +++++ LC++G+ + AS 
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M    ++PNAF Y  L+ G+C  G ++   E+F  M  +    D + YN LI G  
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K   VEE+   + ++  +G+ P   TY+ L HG  +    E A +L   M
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 191/393 (48%), Gaps = 22/393 (5%)

Query: 1   MRHMHPSPPPV----------------SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP 44
           M   +PSPP V                +  ++L+    K+        +   +   G+ P
Sbjct: 148 MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAP 207

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
            +   + L+    +   ++L + +   ++ +  +P+V T+++LI+  C       A  + 
Sbjct: 208 SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 267

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +++  GC  N +TYN LI GLCR+G    A    K+M     + G+V  P+  TY  +I
Sbjct: 268 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME----DYGLV--PDGFTYGALI 321

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +GLCK    ++AK L  +M    L PNVV Y +LI GF    + +EA  ++ EMV  GVQ
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN ++ + ++  LCK G+MD AS LL  MV+   RP+  TYN +++G            L
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 441

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              ME+ G   + ++Y+I+I+G C++ E E+A  L  E+  KG+KP    Y  L  G   
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                 A ++F +M   +V  D   Y + I GL
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 8/386 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    +  + D    + K + + G+ P+  TY  L+   CKMGQ+    ++
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+ +T+  +I+G        +A  L ++++  G  PNV TY+ +I+GLC+
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A +L +EMT          KPN   Y+ +I G C+EG V  A E+F +M   N+
Sbjct: 467 SGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y SLI G        E+     +M ++G+ PN  + + +++   KNG +++A +
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 580

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   ++PN   Y  L++ +  +  I +V   F SM   G   D+  Y ILI+   
Sbjct: 581 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 640

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  +E A  + + +   G  P V  Y++L  GL +    E+A  +  EM    V  +  
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 700

Query: 369 TYRTFIDGLCVRPQVRFTYARRKGNS 394
            Y   IDGLC    +  +YAR   NS
Sbjct: 701 CYNALIDGLCKSGDI--SYARNVFNS 724



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 166/332 (50%), Gaps = 14/332 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L++ + K G+V     +   +     AP++    +L+K L       +A AL  K++ F
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR----ADAMALLWKVREF 234

Query: 111 ----GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
               G  P+V TY+TLI   C+      A  +  EM     E G     NTVTY+++I G
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR----ERGCGL--NTVTYNVLIAG 288

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC+ G V++A      M+   L P+  TY +LI+G C +   NEAK LL EM    ++PN
Sbjct: 289 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV    +++   + G  D A +++  MV   V+PN  TY+ L+ G C  G+++R   L  
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M     + D  +YN++I G+ ++   ++A  L +E+   GI P V TY+ + HGL +  
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E+A  L  EM    +  +   Y   I G C
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 188/404 (46%), Gaps = 42/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++I++  L ++   +    L + + + GL P+ + Y+ LI+ +C+ G VSL   I
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 511

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P++  + SLI GL    R+ E+   F +++  G  PN  TY+ LI+G  +
Sbjct: 512 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 571

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-- 186
            G    A  L + M +         KPN V Y  +++   K   ++K    F  M  +  
Sbjct: 572 NGDLESAEQLVQRMLDTG------LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 187 ------------NLN---------------------PNVVTYTSLIHGFCHANDWNEAKG 213
                       NL+                     P+V  Y+SLI G C   D  +A G
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L EM  +GV PN+V  N +++ LCK+G +  A  + + ++   + PN  TY +L+DG C
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I+    L+  M + G   D F Y++L  G     ++E+A+ L  E+  +G   ++ 
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASIS 804

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++N L  G  +  + +  LKL   + G  +  +  T    I GL
Sbjct: 805 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    ++        L   + + G+ P++YTYSI+I+  C+ G+      +
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN   +  LI G C E  +  A  +F K+      P++  YN+LI GL +
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    +   F +M     E G++  PN  TYS +I G  K G ++ A++L  +M    L
Sbjct: 537 VGRVEESTKYFAQMQ----ERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V Y  L+  +  ++D  +       M+DQGV  +     ++++ L  +G M+ A R
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  + +    P+   Y++L+ G C T    +   +   M   G   +   YN LI+G C
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++  A +++N +  KG+ P  VTY +L  G  ++     A  L+ EM    +  D  
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 369 TYRTFIDG 376
            Y     G
Sbjct: 771 VYSVLTTG 778



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 162/368 (44%), Gaps = 60/368 (16%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL    K+   + V S FK +   G+  D   Y ILI+     G +   F +   I ++ 
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V  ++SLI GLC  +   +A  +  ++   G +PN++ YN LI+GLC++G    A 
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           N+F      N  +     PN VTY+ +IDG CK G +  A  L+ +M    + P+   Y+
Sbjct: 720 NVF------NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 773

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            L  G   A D  +A  L+ EM  +G   ++ S N +++  CK GKM    +LL +++  
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 832

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRV-------------------KELFVSMESMG----- 292
            + PNA T   ++ G    GK++ V                     LF+ M + G     
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 892

Query: 293 ---------CKHDDF--------------------SYNILINGYCKNKEVEEALSLYNEL 323
                    CK  +                     SY  +++  C+  ++ EAL+L  E+
Sbjct: 893 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952

Query: 324 PFKGIKPT 331
             +GI P+
Sbjct: 953 DKRGICPS 960



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 29/306 (9%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V  ++ L+  L K    +    +   ++  G+ P++  Y+ LI+  CK G +S   
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  IL     PN VT+TSLI G C    I  A  L+ ++ A G  P+   Y+ L  G 
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 127 CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
              G    A+ L +EM   G+  I         +++ ++DG CK G + +  +L   +  
Sbjct: 780 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 831

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-------------------MVDQGVQPN 226
             L PN +T  ++I G   A   +E   + +E                   M++QG  P 
Sbjct: 832 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 891

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            V  ++I +  CK G +D A  L D++V         +Y  ++D  C  GK++    L  
Sbjct: 892 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 950

Query: 287 SMESMG 292
            M+  G
Sbjct: 951 EMDKRG 956



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 34/311 (10%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           AP    F  L   LCA S    A  L  K+ +A+   P V+   ++   L  +GH   A+
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA--SIHRALSDSGHRSPAV 176

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
                                    +++D   K G V  A E+ L M+   + P++    
Sbjct: 177 -----------------------LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCN 213

Query: 197 SLIHGFCHANDWNEAKGLLIE----MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +L+     A    +A  LL +    MV  G+ P+V + + ++   CK  + D A ++L  
Sbjct: 214 ALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVE 269

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +     N  TYN L+ G C +G +         ME  G   D F+Y  LING CK++ 
Sbjct: 270 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 329

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             EA +L +E+    +KP VV Y  L  G      A+ A K+  EM    V  +  TY  
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 389

Query: 373 FIDGLCVRPQV 383
            + GLC   Q+
Sbjct: 390 LVRGLCKMGQM 400



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 18/202 (8%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P    +  L    C  + +N A GLLI+M+     P VV ++ I   L  +G    A  +
Sbjct: 120 PAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLAS-IHRALSDSGHRSPA--V 176

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           LD++V               D +  +G++    E+ + M   G        N L+    +
Sbjct: 177 LDVLV---------------DTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR 221

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +     +   +   GI P V TY+TL     ++R+ + A K+ VEM+      +T T
Sbjct: 222 ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVT 281

Query: 370 YRTFIDGLCVRPQVRFTYARRK 391
           Y   I GLC    V   +  +K
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKK 303


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  ++L+    K    +T  ++F  + S  + PDL  +S +++ F + G +    
Sbjct: 327 SPDSTTYRSLLMEACKKGDAVETE-NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           + F  +  +   P+ V +T LI+G C +  I EA  L  ++   GC  +V+TYNT+++GL
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGL 445

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A  LF EMT    E G+   P++ T +I+IDG CK G +  A ELF +MK +
Sbjct: 446 CKRKMLGEADKLFNEMT----ERGLF--PDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  +VVTY +L+ GF    D + AK +  +MV + + P  +S ++++N LC  G +  A
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+ D M+   ++P     N+++ G+C +G  +  +     M S G   D  SYN LI G
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619

Query: 307 YCKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + K + + +A  L  ++  K  G+ P V TYN++ HG     Q + A  +  +M    V 
Sbjct: 620 FVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVN 679

Query: 365 ADTCTYRTFIDGL 377
            D  TY + I+G 
Sbjct: 680 PDRSTYTSLINGF 692



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+   +     +    L   + S G  P +YTY+ +IN  CK G+      +
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +LRS  +P+  T+ SL+   C +   VE   +F+ +++    P+++ ++++++   R
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   AL  F    N   E G++  P+ V Y+I+I G C++G + +A  L  +M  +  
Sbjct: 378 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY +++HG C      EA  L  EM ++G+ P+  +  ++++  CK G + NA  
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  ++ +  TYNTL+DGF   G I+  KE++  M S        S++IL+N  C
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + EA  +++E+  K IKPTV+  N++  G      A        +M       D  
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCI 611

Query: 369 TYRTFIDGL 377
           +Y T I G 
Sbjct: 612 SYNTLIYGF 620



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S F++L+    + +        F  L S G    +   + LI    ++G V L + I+  
Sbjct: 156 SVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQE 215

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           I RS    NV T   ++  LC + ++ +     ++++  G  P+++TYNTLI+     G 
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  L   M +        F P   TY+ +I+GLCK G  ++AKE+F +M    L+P+
Sbjct: 276 MEEAFELMHAMPSKG------FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY SL+   C   D  E + +  +M  + V P++V  + +M+   ++G +D A    +
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            + +  + P+   Y  L+ G+C  G I+    L   M   GC  D  +YN +++G CK K
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            + EA  L+NE+  +G+ P   T   L  G  ++   + A++LF +M+   +  D  TY 
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509

Query: 372 TFIDGL 377
           T +DG 
Sbjct: 510 TLLDGF 515



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L K+   + V +    +   G++PD+ TY+ LI+ +   G +   F +  
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +    F+P V T+ ++I GLC   +   A  +F ++   G  P+  TY +L+   C+ G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             +   N+F +M + +    VV  P+ V +S ++    + G +DKA   F  +K   L P
Sbjct: 345 DAVETENIFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + V YT LI G+C     +EA  L  EM+ QG   +VV+ N I++ LCK   +  A +L 
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + P+++T   L+DG C  G +    ELF  M+    K D  +YN L++G+ K 
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +++ A  ++ ++  K I PT ++++ L + L        A +++ EM    +       
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578

Query: 371 RTFIDGLC 378
            + I G C
Sbjct: 579 NSMIKGYC 586



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 8/360 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ ++    ++ + D  L  F  +   GL PD   Y+ILI  +C+ G +S    +
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+   A +VVT+ +++ GLC    + EA  LF ++   G  P+  T   LI+G C+
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LFK+M           K + VTY+ ++DG  K G +D AKE++  M  + +
Sbjct: 483 LGNLQNAMELFKKMKEKR------IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  ++++ L++  C     +EA  +  EM+ + ++P V+  N ++   C++G   +   
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDDFSYNILING 306
            L+ M+     P+  +YNTL+ GF     +++   L   ME    G   D F+YN +++G
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+  +++EA ++  ++  +G+ P   TY +L +G         A +   EM     + D
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + + N L+G L +    +    +++ ++  G+  ++YT +I++N  CK G++        
Sbjct: 190 IDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLS 249

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P++VT+ +LI    ++  + EA  L   + + G  P V TYNT+INGLC+ G
Sbjct: 250 EVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG 309

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +F EM            P++ TY  ++   CK+G   + + +F  M+  ++ P
Sbjct: 310 KYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++V ++S++  F  + + ++A      + + G+ P+ V   +++   C+ G +  A  L 
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+Q     +  TYNT++ G C    +    +LF  M   G   D ++  ILI+G+CK 
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             ++ A+ L+ ++  K IK  VVTYNTL  G  ++   + A +++ +M   ++     ++
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543

Query: 371 RTFIDGLCVR 380
              ++ LC +
Sbjct: 544 SILVNALCSK 553



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 6/330 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +LI  F +  ++   +  F  +    +  ++    +LI  L     +  A  ++ ++ 
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             G   NV T N ++N LC+ G          E+     E GV   P+ VTY+ +I    
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ----EKGVY--PDIVTYNTLISAYS 271

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            +G +++A EL   M  +  +P V TY ++I+G C    +  AK +  EM+  G+ P+  
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +   ++ E CK G       +   M   DV P+   ++++M  F  +G +++    F S+
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +  G   D+  Y ILI GYC+   + EA++L NE+  +G    VVTYNT+ HGL + +  
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             A KLF EM    +  D+ T    IDG C
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHC 481



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 8/289 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N +L  L K K       LF  +   GLFPD YT +ILI+  CK+G +     +F 
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++       +VVT+ +L+ G      I  A  ++  + +    P  I+++ L+N LC  G
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           H   A  ++ EM      I    KP  +  + +I G C+ G     +    +M  E   P
Sbjct: 555 HLSEAFRVWDEM------ISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVP 608

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--GVQPNVVSSNVIMNELCKNGKMDNASR 248
           + ++Y +LI+GF    + ++A GL+ +M ++  G+ P+V + N I++  C+  +M  A  
Sbjct: 609 DCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEA 668

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           +L  M++  V P+  TY +L++GF     +         M   G   DD
Sbjct: 669 VLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 17/243 (6%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-------KYENLNPNVVTYTS-------- 197
           FK  +++ S +I  L + G +  A+   L+M       + E +N  V TY++        
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 198 --LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
             LI  F  A    EA      +  +G   ++ + N ++  L + G ++ A R+   + +
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             V  N +T N +++  C  GK+ +V      ++  G   D  +YN LI+ Y     +EE
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L + +P KG  P V TYNT+ +GL +  + ERA ++F EM  + ++ D+ TYR+ + 
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338

Query: 376 GLC 378
             C
Sbjct: 339 EAC 341


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+L+  L ++   +      K +   GL PD +TY  LIN  CK  + +    +   +
Sbjct: 154 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 213

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   PNVV + +LI G   E    EA  +  ++ A G +PN ITY+ L+ GLC+ G  
Sbjct: 214 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 273

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L K+M   +       +P+T+TY++II+G  +      A  L  +M+   ++PNV
Sbjct: 274 DRASLLLKQMVRDS------HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNV 327

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY+ +IHG C + +  +A  LL EM  +G++PN      +++  C+ G +  A  + D 
Sbjct: 328 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 387

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + +V P+ + YN+L+ G    G++    + F  M+  G   ++F+Y+ LI+GY KN +
Sbjct: 388 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 447

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E A  L   +   G+KP  V Y  L    F+    E+    F  M    V  D   Y  
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507

Query: 373 FIDGL 377
            I  L
Sbjct: 508 LIHNL 512



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N LL  L +      +  + + +   G+ PD+YTYS LI  +CK+ +      +
Sbjct: 80  PSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV 139

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N VT+  LI GLC    + EA      ++ +G  P+  TY  LINGLC+
Sbjct: 140 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 199

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +  +  A  L  EM+          KPN V Y+ +IDG  +EG  D+A ++  +M    +
Sbjct: 200 SRRSNEAKALLDEMSCAE------LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 253

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY +L+ G C     + A  LL +MV    +P+ ++ N+I+    ++    +A R
Sbjct: 254 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFR 313

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    + PN +TY+ ++ G C +G+  +  +L   M + G K + F Y  LI+GYC
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   V  A  +++++    + P +  YN+L  GL ++ + E + K F +MQ   +  +  
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433

Query: 369 TYRTFIDG 376
           TY   I G
Sbjct: 434 TYSGLIHG 441



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+    K + +DT   +   +   G   +  TY++LI   C+ G V   F  
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+  T+ +LI GLC   R  EA AL  ++     +PNV+ Y  LI+G  R
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + KEM      +    +PN +TY  ++ GLCK G +D+A  L  QM  ++ 
Sbjct: 235 EGNADEAFKMIKEM------VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +TY  +I G    ++  +A  LL EM + G+ PNV + +++++ LC++G+ + AS 
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M    ++PNAF Y  L+ G+C  G ++   E+F  M  +    D + YN LI G  
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   VEE+   + ++  +G+ P   TY+ L HG  +    E A +L   M    +  +  
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 468

Query: 369 TYRTFID 375
            Y   ++
Sbjct: 469 IYIDLLE 475



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 190/386 (49%), Gaps = 8/386 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    +  + D    + K + + G+ P+  TY  L+   CKMGQ+    ++
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++R    P+ +T+  +I+G        +A  L ++++  G  PNV TY+ +I+GLC+
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A +L +EMT          KPN   Y+ +I G C+EG V  A E+F +M   N+
Sbjct: 340 SGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 393

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y SLI G        E+     +M ++G+ PN  + + +++   KNG +++A +
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 453

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M+   ++PN   Y  L++ +  +  I +V   F SM   G   D+  Y ILI+   
Sbjct: 454 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 513

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  +E A  + +E+   G  P V  Y++L  GL +    E+A  +  EM    V  +  
Sbjct: 514 SSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 573

Query: 369 TYRTFIDGLCVRPQVRFTYARRKGNS 394
            Y   IDGLC    +  +YAR   NS
Sbjct: 574 CYNALIDGLCKSGDI--SYARNVFNS 597



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 191/393 (48%), Gaps = 22/393 (5%)

Query: 1   MRHMHPSPPPV----------------SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP 44
           M   +PSPP V                +  ++L+    K+        +   +   GL P
Sbjct: 21  MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAP 80

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
            +   + L+    +   ++L + +   ++ +  +P+V T+++LI+  C       A  + 
Sbjct: 81  SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 140

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +++  GC  N +TYN LI GLCR+G    A    K+M     + G+V  P+  TY  +I
Sbjct: 141 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME----DYGLV--PDGFTYGALI 194

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +GLCK    ++AK L  +M    L PNVV Y +LI GF    + +EA  ++ EMV  GVQ
Sbjct: 195 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 254

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN ++ + ++  LCK G+MD AS LL  MV+   RP+  TYN +++G            L
Sbjct: 255 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRL 314

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              ME+ G   + ++Y+I+I+G C++ E E+A  L  E+  KG+KP    Y  L  G   
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                 A ++F +M   +V  D   Y + I GL
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 165/332 (49%), Gaps = 14/332 (4%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L++ + K G+V     +   +     AP++    +L+K L       +A AL  K++ F
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR----ADAMALLWKVREF 107

Query: 111 ----GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
               G  P+V TY+TLI   C+      A  +  EM      +      NTVTY+++I G
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL------NTVTYNVLIAG 161

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC+ G V++A      M+   L P+  TY +LI+G C +   NEAK LL EM    ++PN
Sbjct: 162 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 221

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV    +++   + G  D A +++  MV   V+PN  TY+ L+ G C  G+++R   L  
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M     + D  +YN++I G+ ++   ++A  L +E+   GI P V TY+ + HGL +  
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + E+A  L  EM    +  +   Y   I G C
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 187/404 (46%), Gaps = 42/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++I++  L ++   +    L + + + GL P+ + Y+ LI+ +C+ G VSL   I
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P++  + SLI GL    R+ E+   F +++  G  PN  TY+ LI+G  +
Sbjct: 385 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY---------------------------- 160
            G    A  L + M +         KPN V Y                            
Sbjct: 445 NGDLESAEQLVQRMLDTG------LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 161 -------SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                   I+I  L   G ++ A  +  +++     P+V  Y+SLI G C   D  +A G
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +L EM  +GV PN+V  N +++ LCK+G +  A  + + ++   + PN  TY +L+DG C
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G I+    L+  M + G   D F Y++L  G     ++E+A+ L  E+  +G   ++ 
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASIS 677

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           ++N L  G  +  + +  LKL   + G  +  +  T    I GL
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 721



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 171/368 (46%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    ++ +      L   + + G+ P++YTYSI+I+  C+ G+      +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN   +  LI G C E  +  A  +F K+      P++  YN+LI GL +
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    +   F +M     E G++  PN  TYS +I G  K G ++ A++L  +M    L
Sbjct: 410 VGRVEESTKYFAQMQ----ERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V Y  L+  +  ++D  +       M+DQGV  +     ++++ L  +G M+ A R
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  + +    P+   Y++L+ G C T    +   +   M   G   +   YN LI+G C
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++  A +++N +  KG+ P  VTY +L  G  ++     A  L+ EM    +  D  
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 369 TYRTFIDG 376
            Y     G
Sbjct: 644 VYSVLTTG 651



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 175/409 (42%), Gaps = 65/409 (15%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL    K+   + V S FK +   G+  D   Y ILI+     G +   F +   I ++ 
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P+V  ++SLI GLC  +   +A  +  ++   G +PN++ YN LI+GLC++G    A 
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           N+F      N  +     PN VTY+ +IDG CK G +  A  L+ +M    + P+   Y+
Sbjct: 593 NVF------NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 646

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            L  G   A D  +A  L+ EM  +G   ++ S N +++  CK GKM    +LL +++  
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR 705

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRV-------------------KELFVSMESMG----- 292
            + PNA T   ++ G    GK++ V                     LF+ M + G     
Sbjct: 706 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 765

Query: 293 ---------CKHDDF--------------------SYNILINGYCKNKEVEEALSLYNEL 323
                    CK  +                     SY  +++  C+  ++ EAL+L  E+
Sbjct: 766 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825

Query: 324 PFKG-IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
             +G ++PT+V       G+F  R+    L   V         D+   R
Sbjct: 826 DKRGNLQPTLVA----LLGIFWFRRHHHILNKSVTKMATRFGKDSSRCR 870



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 29/306 (9%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V  ++ L+  L K    +    +   ++  G+ P++  Y+ LI+  CK G +S   
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  IL     PN VT+TSLI G C    I  A  L+ ++ A G  P+   Y+ L  G 
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 127 CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
              G    A+ L +EM   G+  I         +++ ++DG CK G + +  +L   +  
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 704

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-------------------MVDQGVQPN 226
             L PN +T  ++I G   A   +E   + +E                   M++QG  P 
Sbjct: 705 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
            V  ++I +  CK G +D A  L D++V         +Y  ++D  C  GK++    L  
Sbjct: 765 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 823

Query: 287 SMESMG 292
            M+  G
Sbjct: 824 EMDKRG 829



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 8/226 (3%)

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE---- 217
           +++D   K G V  A E+ L M+   L P++    +L+     A    +A  LL +    
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA----DAMALLWKVREF 107

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           MV  G+ P+V + + ++   CK  + D A ++L  M +     N  TYN L+ G C +G 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +         ME  G   D F+Y  LING CK++   EA +L +E+    +KP VV Y  
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L  G      A+ A K+  EM    V  +  TY   + GLC   Q+
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 273



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 18/190 (9%)

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C  + +N A GLLI+M+     P VV ++ I   L  +G    A  +LD++V       
Sbjct: 5   MCAGSLFNLANGLLIKMIRAYPSPPVVLAS-IHRALSDSGHRSPA--VLDVLV------- 54

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
                   D +  +G++    E+ + M   G        N L+    +   +     +  
Sbjct: 55  --------DTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
            +   GI P V TY+TL     ++R+ + A K+ VEM+      +T TY   I GLC   
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 382 QVRFTYARRK 391
            V   +  +K
Sbjct: 167 AVEEAFGFKK 176


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 82  HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 141

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 201

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 202 GLCKESKMDGANGLFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 256 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 315

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y +++
Sbjct: 316 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIV 375

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 100 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 159

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 160 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDGAN 213

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            LF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 333

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 334 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 393

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +  A    TY   ++G
Sbjct: 394 MQRDGHAPSVVTYNVLMNG 412



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 306 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 344



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 171

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  + A GL  EM+ +G+ PN V+ 
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 231

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 291

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 292 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 351

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   ++  C +  V
Sbjct: 352 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDV 384



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 129 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++    LF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 189 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 248

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 249 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 308

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 309 CKEGDLDTAFEHRK 322



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 2   SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++ A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 280


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDGANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDGAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           M  +  A    TY   ++G
Sbjct: 413 MHRDGHAPSVVTYNVLMNG 431



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  + A  L  EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 403



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++ A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 187/401 (46%), Gaps = 37/401 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + +N +L  L K   Y + + +F +L    + PD  T+ I ++ F + G++      
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++S   P V TFT LI  L     I EA   F  +K   C PNV+TY TL+NGL +
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F EM   N        P+ + Y+ +IDGL K G  D A  LF +MK   L
Sbjct: 370 AGRLEEACEVFVEMKENN------CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY  +I     A    EA  L  ++ +QG  P+V + N +++ L K G+MD    
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 249 LLDLMV----QCDVRPNA---------------------------FTYNTLMDGFCLTGK 277
           ++  MV    +C +  ++                            TYNTLM  F   G 
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++   +L   M+   C     +Y  L++G  K   ++EA+SL  E+  +G +P+VVTY++
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L    ++  Q E +L LF EM      AD  TY   I+ LC
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLC 644



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           VS++++++ CL K+   D  L +F R+   G+ P L  Y  L++   K  ++     IF 
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S   P+   +  ++ GL   +R+ EA  L   +K     P++ TY +L++GL ++G
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A N+F +MT    E      P+ V Y+ ++D L K G +  A  +F  M  +   P
Sbjct: 753 RLEEAFNMFTKMTEEGHE------PDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP 806

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVTY+SLI          EA       + +G  PNV   + +++   K G +D A  L 
Sbjct: 807 DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +    PN  TYN L+ G    G++N  ++L   ME +GC  D  +YNILI+G  K 
Sbjct: 867 EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             V+EA S +  +  KGI P V+T+ +L   L ++ +   A +LF  M+         TY
Sbjct: 927 GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986

Query: 371 RTFID 375
              ID
Sbjct: 987 NVLID 991



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 185/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  L K    D  +SL + +   G  P + TYS L+  F K  Q   
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE 616

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  ++R     +V T++ +I  LC    + +A  +F ++K  G EP +  Y TL++
Sbjct: 617 SLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLS 676

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L +      AL +F E+   +        P+T  Y+I+++GL K   VD+A +L   MK
Sbjct: 677 SLVKDEKIDFALQIFNELQESS------LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK 730

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +N+ P++ TYTSL+ G   +    EA  +  +M ++G +P+VV+   +M+ L K GK+ 
Sbjct: 731 NQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLS 790

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A  +   M +    P+  TY++L+D     G++      F +  S GC  +   Y+ LI
Sbjct: 791 HALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI 850

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + + K   V+ AL L+ E+  +   P +VTYN L  GL +  +   A KL  EM+     
Sbjct: 851 DSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCV 910

Query: 365 ADTCTYRTFIDGL 377
            D  TY   IDG+
Sbjct: 911 PDLVTYNILIDGV 923



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 37/409 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F I +    ++   D      + +   G+ P ++T+++LI+   K G +      
Sbjct: 285 PDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKF 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +PNVVT+T+L+ GL    R+ EA  +F ++K   C P+ I YNTLI+GL +
Sbjct: 345 FNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGK 404

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A  LFKEM +     G+V  PN  TY+I+I  L K G   +A +LF  +K +  
Sbjct: 405 AGEADMACGLFKEMKDR----GLV--PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ------------------------ 224
            P+V TY +LI         ++   ++ EMV++G +                        
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518

Query: 225 PNV-------VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           P++       ++ N +M+    NG +D A +LL++M + +  P   TY TL+DG    G+
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++    L   ME  GC+    +Y+ L+  + K  + EE+LSL++E+  KG    V TY+ 
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           + + L +    ++AL +F  M+   +      Y+T +  L    ++ F 
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFA 687



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 181/374 (48%), Gaps = 6/374 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++  LL  L K++  D  L +F  L    L PD + Y+I++N   K  +V     +
Sbjct: 666  PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +      P++ T+TSL+ GL    R+ EA  +FTK+   G EP+V+ Y +L++ L +
Sbjct: 726  VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    AL +F+ M            P+ VTYS +ID L KEG V++A   F     +  
Sbjct: 786  GGKLSHALIIFRAMAKKR------CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             PNV  Y+SLI  F      + A  L  EM  +   PN+V+ N +++ L K G+++ A +
Sbjct: 840  TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LL+ M +    P+  TYN L+DG    G ++  +  F  M+  G   D  ++  LI    
Sbjct: 900  LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            K  ++ EA  L++ +  +G  P+VVTYN L   L    +   A  +F EM+      D  
Sbjct: 960  KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGI 1019

Query: 369  TYRTFIDGLCVRPQ 382
            T       L VR Q
Sbjct: 1020 TIGIMKRILSVREQ 1033



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 181/394 (45%), Gaps = 25/394 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+  LAK    +    +F  +      PD   Y+ LI+   K G+  +   +
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN+ T+  +I  L    R  EA  LF  LK  G  P+V TYNTLI+ L +
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNT-------------------------VTYSII 163
            G     L + KEM    GE  +    N                          +TY+ +
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           +      G VD+A +L   MK     P VVTYT+L+ G   A   +EA  LL EM  QG 
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +P+VV+ + +M    K  + + +  L D MV+     +  TY+ +++  C +  +++  +
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +F  M+  G +    +Y  L++   K+++++ AL ++NEL    + P    YN + +GL 
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  + + A KL   M+  ++  D  TY + +DGL
Sbjct: 715 KSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 193/410 (47%), Gaps = 37/410 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NI++  L K         LF  L   G  PD++TY+ LI+   K GQ+     I
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 69  FGRIL------------------------RSCFAPNV-------VTFTSLIKGLCAESRI 97
              ++                        R+   P++       +T+ +L+        +
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHV 544

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            EA  L   +K   C P V+TY TL++GL + G    A++L +EM     E      P+ 
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCE------PSV 598

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTYS ++    K    +++  LF +M  +    +V TY+ +I+  C ++D ++A  +   
Sbjct: 599 VTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGR 658

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M ++G++P + +   +++ L K+ K+D A ++ + + +  + P+ F YN +++G   + +
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++   +L  SM++     D F+Y  L++G  K+  +EEA +++ ++  +G +P VV Y +
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           L   L +  +   AL +F  M       D  TY + ID L    +V   Y
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 172/398 (43%), Gaps = 37/398 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++ +++  LA  +  D V+ +   +   G    ++  + L+  F     VS    IF 
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P+   +  +++ L        A  +F KL  F  +P+  T+   ++   R+G
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A    +EM            P   T++++ID L K G +D+A + F  MK    +P
Sbjct: 302 RLDPAAEPIQEMIKSG------IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVVTYT+L++G   A    EA  + +EM +    P+ ++ N +++ L K G+ D A  L 
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + PN  TYN ++      G+     +LF  ++  G   D F+YN LI+   K 
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475

Query: 311 KEVEEALSLYNELPFKGIK------------------------PTV-------VTYNTLF 339
            ++++ L++  E+  KG +                        P++       +TYNTL 
Sbjct: 476 GQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLM 535

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                    + A+KL   M+ ++      TY T +DGL
Sbjct: 536 SAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 6/301 (1%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           ++  V T+T +IK L           + T +   G   ++    +L+     T +   AL
Sbjct: 178 YSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGAL 237

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +F +M +          P+T  Y+ +++ L K GF   A  +F ++    + P+  T+ 
Sbjct: 238 EIFNQMKSFG------CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFR 291

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
             +H F  +   + A   + EM+  G+ P V +  V+++ L K+G +D A +  + M   
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              PN  TY TL++G    G++    E+FV M+   C  D  +YN LI+G  K  E + A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L+ E+  +G+ P + TYN +   L +  +   A +LF +++      D  TY T ID 
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471

Query: 377 L 377
           L
Sbjct: 472 L 472



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 74/135 (54%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP + ++N LL  LAK    +    L + +  +G  PDL TY+ILI+   KMG V     
Sbjct: 875  PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
             F R+      P+V+TFTSLI+ L    +++EA  LF  ++  G  P+V+TYN LI+ L 
Sbjct: 935  YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994

Query: 128  RTGHTIVALNLFKEM 142
            R G    A  +F EM
Sbjct: 995  RAGKVHEAAMIFHEM 1009



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 70/226 (30%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G    V +  +++  L    + D   ++L  M +   R +     +L+  F  T  ++  
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 282 KELFVSMESMGC-----------------------------------KHDDFSYNILING 306
            E+F  M+S GC                                   + D  ++ I ++ 
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTV---------------------------------- 332
           + ++  ++ A     E+   GI P V                                  
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 333 -VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            VTY TL +GL +  + E A ++FVEM+ N+ + D   Y T IDGL
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + J
Sbjct: 101 HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJ 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+      A  LF EM       G+V  PN V ++ +IDG CK G VD A E++ QM 
Sbjct: 221 GXCKESKXDDANELFDEMLVK----GLV--PNXVXFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q + R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 XAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 151/319 (47%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+G CKE   D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGXCKESKXDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN V +T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + D 
Sbjct: 293 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDX 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C      +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 117/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N  CK  K D+A+ L D M+   + PN   + TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   +   D   Y   I GLC
Sbjct: 325 DGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLC 363



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DJY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 71  DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V    +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 245 PNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  +  +   V Y  L  GL  
Sbjct: 305 IDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCX 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +             T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  + ++A  L++E+  KG+ P  V + TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 27/388 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLF---------------------KRLNSIGLFPDLYTY 49
           + S+N L+    K   YD   SL                      K+ +++ L  DL TY
Sbjct: 182 IVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITY 241

Query: 50  SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
           + +I+ +CK   +     ++  ++ + F P+VVT++S++ GLC + R+ EA  L  ++K 
Sbjct: 242 TTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKK 301

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
            G +PN + Y TLI+ L + G    A     ++      + +V        + ++DGL K
Sbjct: 302 MGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVM------CTTLVDGLFK 355

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
                +A+++F  +   NL PN +TYT+LI G+C   D    + LL EM ++ + PNV++
Sbjct: 356 SSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            + I+N   K G +D A  ++  M+  ++ PNA+ Y  L+DG+C  GK     +L+  M+
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G K ++  +++L+N   + K ++EA  L  ++  +G+    V Y +L  G F+  +  
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGL 377
            AL +  EM    +  D  TY   I+GL
Sbjct: 536 AALNMVEEMTEKSIPFDVVTYNVLINGL 563



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 193/404 (47%), Gaps = 29/404 (7%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M   H +P  ++  +I+ G   K    D  +++ K++    + P+ Y Y+ILI+ +CK G
Sbjct: 404 MEEKHINPNVITYSSIING-YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAG 462

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +  +   ++  +  S    N V F  L+  L    R+ EA  L   + + G   + + Y 
Sbjct: 463 KQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYT 522

Query: 121 TLINGLCRTGHTIVALNLFKEMT---------------NG-------------NGEIGVV 152
           +L++G  + G    ALN+ +EMT               NG             +G I + 
Sbjct: 523 SLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMG 582

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN  TY+I+I   CK+G +D A EL+ +MK   + P+ +T  +L+ G   A +  +A 
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAM 642

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L EM   G+ PN+V   V++N   K+GK +   ++ + +V   ++ N   YN L+  F
Sbjct: 643 NVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVF 702

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C      +   +   M   G   D  +YN LI GYC++  V++AL+ Y ++  +G+ P +
Sbjct: 703 CRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNI 762

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           VTYN L  GL          +LF +M+ N +  D  TY T I G
Sbjct: 763 VTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISG 806



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 184/402 (45%), Gaps = 40/402 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ ++  L K+        L + +  +G+ P+   Y+ LI+   K G     F  
Sbjct: 271 PDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFAC 330

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++      ++V  T+L+ GL   S+  EA  +F  L      PN ITY  LI+G C+
Sbjct: 331 QSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCK 390

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +L +EM   +        PN +TYS II+G  K+G +D+A  +  +M  +N+
Sbjct: 391 VGDMERVESLLQEMEEKH------INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNI 444

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN   Y  LI G+C A     A  L  EM   G++ N V  +V++N L +  +MD A  
Sbjct: 445 IPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEE 504

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK----INRVKEL-------------------- 284
           LL  +    +  +   Y +LMDGF   GK    +N V+E+                    
Sbjct: 505 LLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLL 564

Query: 285 ----------FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
                     +  M  MG   +  +YNI+I  YCK  E++ AL L+NE+    I P+ +T
Sbjct: 565 EHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSIT 624

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            NTL  GL E  + E+A+ +  EM    +  +   +R  ++ 
Sbjct: 625 CNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNA 666



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 15/349 (4%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D  T +IL+  FC++G    G  I   ++      +V+ F +LI G C    +  A  L 
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF----------- 153
            +++  G   ++++YNTLING C+ G    A +L  E++   G    VF           
Sbjct: 171 ERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD 230

Query: 154 ----KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
               + + +TY+ II   CK+  +++A+ L+ +M      P+VVTY+S+++G C     +
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA+ LL EM   GV PN V+   +++ L K G    A      +V   +  +     TL+
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           DG   + K    +++F ++  +    +  +Y  LI+GYCK  ++E   SL  E+  K I 
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+TY+++ +G  +    + A+ +  +M   ++  +   Y   IDG C
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYC 459



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 40/391 (10%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
            +F+ L+ + L P+  TY+ LI+ +CK+G +     +   +      PNV+T++S+I G 
Sbjct: 364 DMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGY 423

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
             +  + EA  +  K+      PN   Y  LI+G C+ G   +A +L+ EM         
Sbjct: 424 TKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG----- 478

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN-- 209
             K N V + ++++ L +   +D+A+EL   +    L  + V YTSL+ GF  A   +  
Sbjct: 479 -LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 210 --------------------------------EAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                                           EAK +   M++ G+ PN  + N+++   
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAY 597

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G++DNA  L + M    + P++ T NTL+ G    G+I +   +   M  MG   + 
Sbjct: 598 CKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNL 657

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             + +L+N   K+ +    L ++ +L   G+K     YN L      +R  ++A  +   
Sbjct: 658 VIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKY 717

Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           M  +   ADT TY   I G C    V+   A
Sbjct: 718 MIRDGFVADTVTYNALIRGYCESSHVKKALA 748



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 174/400 (43%), Gaps = 42/400 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+  L + K  D    L K + S GL  D   Y+ L++ F K G+ S    +   + 
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMT 545

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                 +VVT+  LI GL    +  EA ++++ +   G  PN  TYN +I   C+ G   
Sbjct: 546 EKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELD 604

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL L+ EM +          P+++T + ++ GL + G ++KA  +  +M    ++PN+V
Sbjct: 605 NALELWNEMKSHK------IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLV 658

Query: 194 -----------------------------------TYTSLIHGFCHANDWNEAKGLLIEM 218
                                               Y +LI  FC      +A  +L  M
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYM 718

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G   + V+ N ++   C++  +  A      M+   V PN  TYN L+ G    G +
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLM 778

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               ELF  M+  G   D  +Y+ LI+GY K    +E++ LY E+  +G  P   TYN L
Sbjct: 779 AERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVL 838

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                ++ + ++A +L  EMQ   V   + TY   I G C
Sbjct: 839 ISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWC 878



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 30/322 (9%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P ++ +  LI    A   + +   ++T++      PNV T+N L++  C+ G+ I+AL
Sbjct: 6   IVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILAL 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +L +          V  + +TVTY+ +I G C+ G V++A      M  ++   + +T  
Sbjct: 66  DLLR---------NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCN 116

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            L+ GFC        + ++  +V  G   +V+  N +++  CK G+M  A  L++ M + 
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKH-------------------- 295
            +  +  +YNTL++GFC  G+ ++ K L   + ES G K                     
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           D  +Y  +I+ YCK   +EEA +LY E+   G  P VVTY+++ +GL +  +   A +L 
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
            EM+   V  +   Y T ID L
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSL 318



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 6/269 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   + N L+  L++    +  +++   ++ +G+ P+L  + +L+N   K G+ + 
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  +++      N   + +LI   C      +A ++   +   G   + +TYN LI 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C + H   AL  + +M N     GV   PN VTY++++ GL   G + +  ELF +MK
Sbjct: 736 GYCESSHVKKALATYTQMLNE----GV--SPNIVTYNLLLGGLLGAGLMAERDELFDKMK 789

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              LNP+  TY +LI G+    +  E+  L  EMV QG  P   + NV++++  K GKMD
Sbjct: 790 ENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMD 849

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
            A  LL+ M    V P++ TY+ L+ G+C
Sbjct: 850 QARELLNEMQVRGVPPSSSTYDILICGWC 878



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 30/286 (10%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P ++ +N LI      G      +++ EM      +     PN  T+++++   CK G +
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEM------LCSAVPPNVYTHNVLVHAWCKMGNL 61

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A +L   +  E    + VTY ++I GFC     N+A G L  MV +    + ++ N++
Sbjct: 62  ILALDLLRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNIL 118

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +   C+ G      R++D +V      +   +NTL+DG+C  G+++   +L   M   G 
Sbjct: 119 VKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGL 178

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELP-FKGIKPTV-------------------- 332
             D  SYN LING+CK  E ++A SL +E+   +G+K +V                    
Sbjct: 179 LSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADL 238

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +TY T+     +    E A  L+ EM  N    D  TY + ++GLC
Sbjct: 239 ITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLC 284



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 18/251 (7%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
            ++N L+    + +      S+ K +   G   D  TY+ LI  +C+   V      + +
Sbjct: 693 EAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQ 752

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +L    +PN+VT+  L+ GL     + E   LF K+K  G  P+  TY+TLI+G  + G+
Sbjct: 753 MLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGN 812

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              ++ L+ EM      +   F P T TY+++I    K G +D+A+EL  +M+   + P+
Sbjct: 813 KKESIRLYCEM------VAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPS 866

Query: 192 VVTYTSLIHGFCHANDW------------NEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             TY  LI G+C+ +               +AK L+ EM D+G  P   +   I +   +
Sbjct: 867 SSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFAR 926

Query: 240 NGKMDNASRLL 250
            GKM +A +LL
Sbjct: 927 PGKMLDAEKLL 937



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 6/251 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +    +LL   +K+   + VL + ++L  +GL  +   Y+ LI  FC++        +
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSV 714

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R  F  + VT+ +LI+G C  S + +A A +T++   G  PN++TYN L+ GL  
Sbjct: 715 LKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLG 774

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       LF +M   NG       P+  TY  +I G  K G   ++  L+ +M  +  
Sbjct: 775 AGLMAERDELFDKMKE-NG-----LNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGF 828

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TY  LI  F      ++A+ LL EM  +GV P+  + ++++   C   K  +  R
Sbjct: 829 VPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDR 888

Query: 249 LLDLMVQCDVR 259
            L  + + D +
Sbjct: 889 TLKKIYRTDAK 899



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 3/200 (1%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+  N+ P ++ +  LI+ F      ++   +  EM+   V PNV + NV+++  CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A   LDL+   DV  +  TYNT++ GFC  G +N+       M       D  + NI
Sbjct: 61  LILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+ G+C+    +    + + L   G    V+ +NTL  G  +  +   AL L   M+   
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 363 VAADTCTYRTFIDGLCVRPQ 382
           + +D  +Y T I+G C R +
Sbjct: 178 LLSDIVSYNTLINGFCKRGE 197


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 177/342 (51%), Gaps = 7/342 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  L K       + LFK    +   PD +T++ILI   C++G V   F +F  + 
Sbjct: 146 YNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDME 205

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHT 132
                P+VVT+ +LI GLC  + +     LF ++++   C P+++TY ++I+G C++G  
Sbjct: 206 SFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKM 265

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A NLF+EM           +PN +T++++IDG  K G + +A+ ++ +M Y + + +V
Sbjct: 266 KEASNLFEEMMRSG------IQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADV 319

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+TSLI G+C A   N        M  + V P V +  V++N LCK  +++ A   L  
Sbjct: 320 VTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQ 379

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +    + P  F YN ++DGFC  G ++    +   ME   C  D  ++ ILI G+C    
Sbjct: 380 IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGR 439

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           + EA++++N +      P  +T N+L   L +      A ++
Sbjct: 440 MFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 178/370 (48%), Gaps = 7/370 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S++N+L+  L +  H+D V  +F  + S G  PD      L+    +     +   +   
Sbjct: 74  STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +       N   + +L+  L  ++++ EA  LF +       P+  T+N LI GLCR G 
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNP 190
              A  +FK+M +     G +  P+ VTY+ +I+GLCK   V +  ELF +++   + +P
Sbjct: 194 VDRAFEVFKDMES----FGCL--PDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++VTYTS+I GFC +    EA  L  EM+  G+QPNV++ NV+++   K G +  A  + 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M   D   +  T+ +L+DG+C  G++N   + +  M++       ++Y +LIN  CK 
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA     ++    I P    YN +  G  +    +    +  EM+      D  T+
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTF 427

Query: 371 RTFIDGLCVR 380
              I G CV+
Sbjct: 428 TILIIGHCVK 437



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 163/311 (52%), Gaps = 7/311 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SPP   +FNIL+  L +    D    +FK + S G  PD+ TY+ LIN  CK  +V  G 
Sbjct: 174 SPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGC 233

Query: 67  VIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            +F  I  RS  +P++VT+TS+I G C   ++ EA+ LF ++   G +PNVIT+N LI+G
Sbjct: 234 ELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDG 293

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             + G+   A  ++++M   +    V      VT++ +IDG C+ G V+   + +  MK 
Sbjct: 294 FGKIGNIAEAEAMYRKMAYFDCSADV------VTFTSLIDGYCRAGQVNHGLKFWNVMKT 347

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            N++P V TY  LI+  C  N  NEA+  L ++ +  + P     N +++  CK G +D 
Sbjct: 348 RNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDE 407

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            + +L  M +    P+  T+  L+ G C+ G++     +F  M +  C  D+ + N LI+
Sbjct: 408 GNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLIS 467

Query: 306 GYCKNKEVEEA 316
              K     EA
Sbjct: 468 CLLKAGMPNEA 478



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + G  R   + +A+  F   T G    G  F P+     +I   + K     K    FL+
Sbjct: 6   LTGPFRVRASTIAIARFHGQTQG----GSRFYPDRQLTPLIAFEVIKRFNNPKVGFKFLE 61

Query: 183 MKYENLNPN--VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
               NLN N    TY  L+   C     +    +   M   G  P+      ++  + + 
Sbjct: 62  FSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQA 121

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
              D   +LL  +   +VR N+F YN L+       +++    LF     M    D +++
Sbjct: 122 SDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTF 181

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NILI G C+   V+ A  ++ ++   G  P VVTYNTL +GL +  + +R  +LF E+Q 
Sbjct: 182 NILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQS 241

Query: 361 -NDVAADTCTYRTFIDGLC 378
            +D + D  TY + I G C
Sbjct: 242 RSDCSPDIVTYTSIISGFC 260



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N++M  LC+ G  D  + + D M      P++     L+         + VK+L   ++ 
Sbjct: 77  NLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQG 136

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
              + + F YN L++   K  +V EA+ L+ E       P   T+N L  GL  +   +R
Sbjct: 137 KEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDR 196

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           A ++F +M+      D  TY T I+GLC   +V+
Sbjct: 197 AFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQ 230


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 193/367 (52%), Gaps = 7/367 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF++LL   A      + L++F  +  +G  P L + + L+N   + G   +  +++G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   P+  T   + K  C + R+ +A     +++  G E N++ Y+ +++  C  G T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPN 191
             A  + + +            PN VTY++++ G CK+G +++A+ +  +MK   ++  +
Sbjct: 270 EDARRILESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            V Y  +I+G+C     ++A  +  EM D G+  N+   N ++N LCK G+M+   ++L 
Sbjct: 324 EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQ 383

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    +RP+ ++YNTL+DG+C  G + +  E+   M   G      +YN L+ G+C   
Sbjct: 384 EMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLH 443

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +++AL L+  +  +G+ P  ++ +TL  GLF+  + E+AL L+ E     +A +  T+ 
Sbjct: 444 AIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFN 503

Query: 372 TFIDGLC 378
           T I+GLC
Sbjct: 504 TVINGLC 510



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +  I+     ++      +   + +  +GL  +L  Y  +++C+C MG       I
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------C 112
              + R   +PNVVT+T L+KG C + R+ EA  +  ++K  G                C
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 113 EP--------------------NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +                     N+  YNT+INGLC+ G       + +EM +      V 
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VG 389

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+  +Y+ +IDG C+EG + KA E+   M    L    +TY +L+ GFC  +  ++A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   M+ +GV PN +S + +++ L K GK + A  L    +   +  N  T+NT+++G 
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G++   +EL   M+ + C  D  +Y  L +GYCK  ++  A  L N++   G  P+V
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +N+   G F  +Q  +   +  EM    ++ +  TY   I G C
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWC 615



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 187/375 (49%), Gaps = 5/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L ++        ++ ++   G+ PD +T +I+   +C+ G+V+     
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N+V + +++   C      +A  +   L+  G  PNV+TY  L+ G C+
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + KEM    G+I V    + V Y ++I+G C+ G +D A  +  +M+   +
Sbjct: 301 DGRMEEAERVVKEMKE-TGDIVV----DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGI 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+  Y ++I+G C      E + +L EM D G++P+  S N +++  C+ G M  A  
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  +MV+  +     TYNTL+ GFC    I+    L+  M   G   ++ S + L++G  
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + E+AL+L+ E   +G+   V+T+NT+ +GL +I +   A +L   M+      D+ 
Sbjct: 476 KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535

Query: 369 TYRTFIDGLCVRPQV 383
           TYRT  DG C   Q+
Sbjct: 536 TYRTLFDGYCKLGQL 550



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 186/392 (47%), Gaps = 32/392 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FN ++  L K         L  R+  +   PD  TY  L + +CK+GQ+     +  
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++    FAP+V  F S I G     +  +   + +++ A G  PN++TY  LI G C+ G
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A NL+ EM N NG       PN    S ++    KEG VD+A  +  ++   ++ P
Sbjct: 619 NLHEACNLYFEMVN-NG-----MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 191 NV--------------------------VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
                                       V +  +I G C +    +AK L   + ++   
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+  + + +++    +G +D A  L D+M+   + PN  TYN+L+ G C +GK++R   L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  ++S G   +  +YN LI+ YCK  +  EA  L  ++  +GI+PTV+TY+ L +GL  
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
               E A+KL  +M  N+V  +  TY T I G
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 191/406 (47%), Gaps = 56/406 (13%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQ 61
           + PS P + S   LL  LA+ + +    +L   L  ++  LFP L               
Sbjct: 93  LAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL--------------- 137

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                     + R  F  + V+F  L++      ++  A  +F  +   GC P++ + N 
Sbjct: 138 --------AEVYRD-FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 122 LINGLCRTGHTIVALNLFKEMTNG------------------NGEI-----------GVV 152
           L+N L ++G   +A  ++ +M                     +G +           G+ 
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            + N V Y  ++D  C  G+ + A+ +   ++ + L+PNVVTYT L+ G+C      EA+
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 213 GLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            ++ EM + G +  + V+  +++N  C+ G+MD+A+R+ + M    +  N F YNT+++G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G++  V+++   ME +G + D +SYN LI+GYC+   + +A  +   +   G+  T
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +TYNTL  G   +   + AL+L+  M    VA +  +  T +DGL
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL 474



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 189/423 (44%), Gaps = 55/423 (13%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL         D  L L+  +   G+ P+  + S L++   K G+      ++   
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    A NV+TF ++I GLC   R+ EA  L  ++K   C P+ +TY TL +G C+ G  
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 133 IVALNLFKEM----------------------------TNGNGEIGVV-FKPNTVTYSII 163
             A +L  +M                             + + E+      PN VTY  +
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G CKEG + +A  L+ +M    +NPNV   ++L+  F      +EA  +L ++V+  +
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670

Query: 224 QP----------------------NVVSSNVIMN----ELCKNGKMDNASRLLDLMVQCD 257
            P                      N  S+NV+ N     LCK+G++ +A  L + +    
Sbjct: 671 IPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKR 730

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             P+ FTY++L+ G   +G I+    L   M S G   +  +YN LI G CK+ ++  A+
Sbjct: 731 FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAV 790

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L+N+L  KGI P  +TYNTL     +  +   A KL  +M    +     TY   I GL
Sbjct: 791 NLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850

Query: 378 CVR 380
           C +
Sbjct: 851 CTQ 853



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--------------NVITYNTLIN 124
           P++V+   L+  L    R  +A AL + L     EP              + ++++ L+ 
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                G    ALN+F    +G G++G   +P+  + + +++ L + G    A  ++ QM+
Sbjct: 157 AHADAGQLSSALNVF----DGMGKVGC--RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+  T   +   +C      +A   + EM   G++ N+V+ + +M+  C  G  +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNIL 303
           +A R+L+ + +  + PN  TY  L+ G+C  G++   + +   M+  G    D+ +Y ++
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           INGYC+   +++A  + NE+   GI   +  YNT+ +GL ++ + E   K+  EM+   +
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 364 AADTCTYRTFIDGLCVRPQVRFTY 387
             D  +Y T IDG C    +R  +
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAF 414


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDGANGLFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y +++
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIV 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDGAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            LF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +  A    TY   ++G
Sbjct: 413 MQRDGHAPSVVTYNVLMNG 431



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  + A GL  EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   ++  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDV 403



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++    LF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++ A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            +SF++LL  LA     D  L +F  + ++G    + + + ++N   + G +     +F 
Sbjct: 173 AASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE 232

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++ R+   P+  T   + K  C    +V A     ++   G E N++ Y+ ++NG C  G
Sbjct: 233 QMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVG 292

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLN 189
            T  A  +   +  G G     F PN VTY++++ G C E  +++A+ +  ++ K + L 
Sbjct: 293 QTNDARRMLDSLP-GRG-----FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV 346

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            +   + ++I+G+C      +A  LL EMVD  +Q N+   N+++N  CK G+M  A  +
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  M    VRP+ ++YN+L+DG+C  G +N+  E + +M   G      +YN L+ G+C 
Sbjct: 407 LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +++AL L+  +  KGI P  ++ +TL  G F+  + E+AL L+ E     +A +T T
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526

Query: 370 YRTFIDGLC 378
           + T I+GLC
Sbjct: 527 FNTVINGLC 535



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 42/394 (10%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L   + +  +G+  +L  Y  ++N +C++GQ +    +   +    F+PN+VT+T L+K
Sbjct: 262 ALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVK 321

Query: 90  GLCAESRIVEAAALFTKLK----------AFGC--------------------------E 113
           G C E  + EA  +  +++           FG                           +
Sbjct: 322 GYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQ 381

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
            N+  YN +ING C+ G  + A N+  EMT      GV  +P+T +Y+ ++DG CK+G +
Sbjct: 382 VNLFVYNIMINGYCKLGRMVEAHNILHEMT------GVGVRPDTYSYNSLVDGYCKKGLM 435

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +KA E +  M         +TY +L+ GFC     ++A  L   M+ +G+ PN +S + +
Sbjct: 436 NKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTL 495

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++   K+GK + A  L    +   +  N  T+NT+++G C   ++   +EL   M+   C
Sbjct: 496 LDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRC 555

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  +Y  L +GYCK  +++ A  + NEL   G  PT+  +N+L  G F  +Q  +   
Sbjct: 556 PPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVND 615

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +  EM    ++ +T  Y   I G C    +   Y
Sbjct: 616 ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 32/392 (8%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL         D  L L+  +   G+ P+  + S L++ F K G+      ++   
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    A N  TF ++I GLC   R+ EA  L  K+K + C P++ITY TL +G C+ G  
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  +  E+ N      + F P    ++ +I G        K  ++  +M    L+PN 
Sbjct: 576 DRASRILNELEN------LGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNT 629

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V Y +LI G+C   D + A  L +EM+++G+ PN+   + +++   + GK D A+ +L  
Sbjct: 630 VAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQN 689

Query: 253 MVQCDVRPN--------------------------AFTYNTLMDGFCLTGKINRVKELFV 286
           +V  D+ P+                             +N ++ G C  G+I   K L  
Sbjct: 690 LVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLA 749

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            ++  G   D+F+Y+ LI+G   +  V+ A  L + +   G+ P +VTYN+L +GL +  
Sbjct: 750 DLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  RA+ LF ++    ++ +  TY T ID  C
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAITYNTLIDKHC 841



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 164/385 (42%), Gaps = 55/385 (14%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++FN ++  L K +       L  ++      PD+ TY  L + +CK+G +     I   
Sbjct: 525 TTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE 584

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG- 130
           +    FAP +  F SLI G     +  +   +  ++   G  PN + Y  LI G C+ G 
Sbjct: 585 LENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGD 644

Query: 131 -HT------------------------------------------IVALNLFKEMTNGNG 147
            HT                                          +V  ++  +++    
Sbjct: 645 LHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRL 704

Query: 148 EIGVV-----------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           EIG V                + ++I+I GLCK G ++ AK L   +K +    +  TY+
Sbjct: 705 EIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYS 764

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SLIHG   +   + A  L   M+  G+ PN+V+ N ++  LCK+G++  A  L   +   
Sbjct: 765 SLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTK 824

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PNA TYNTL+D  C  G I    +L   M   G     F+Y+ILING C    +EEA
Sbjct: 825 GISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEA 884

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHG 341
           + L +++    + P  VTY TL  G
Sbjct: 885 IKLLDQMIENNVDPNYVTYWTLIQG 909



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 153/327 (46%), Gaps = 6/327 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           +L+ Y+I+IN +CK+G++     I   +      P+  ++ SL+ G C +  + +A   +
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             +   G     +TYN L+ G C  G    AL L+  M            PN ++ S ++
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG------IAPNEISCSTLL 496

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DG  K G  +KA  L+ +     L  N  T+ ++I+G C      EA+ L+ +M      
Sbjct: 497 DGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCP 556

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P++++   + +  CK G MD ASR+L+ +      P    +N+L+ G  +  +  +V ++
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI 616

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M + G   +  +Y  LI G+CK  ++  A +LY E+  KG+ P +   ++L    + 
Sbjct: 617 LFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYR 676

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYR 371
             + + A  +   + G D+  D    R
Sbjct: 677 KGKFDEANLVLQNLVGTDMIPDISAPR 703



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 148/332 (44%), Gaps = 32/332 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  FN L+      K +  V  +   +++ GL P+   Y  LI  +CK G +   + +
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNL 651

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV------------ 116
           +  ++     PN+   +SL+     + +  EA  +   L      P++            
Sbjct: 652 YLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVAN 711

Query: 117 --------------ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
                         I +N +I GLC+ G    A NL  ++ +        F  +  TYS 
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG------FVADNFTYSS 765

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I G    GFVD A +L   M    L PN+VTY SLI+G C + + + A  L  ++  +G
Sbjct: 766 LIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG 825

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + PN ++ N ++++ CK+G +  A +L   M++  + P  FTY+ L++G C  G +    
Sbjct: 826 ISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAI 885

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +L   M       +  +Y  LI GY + + V+
Sbjct: 886 KLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 106/234 (45%), Gaps = 5/234 (2%)

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           E+   F  +  ++ +++  L   G +D A ++F +M+      ++ +  S+++      D
Sbjct: 164 EVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGD 223

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
                 +  +M   G  P+  +  ++    CK   + +A   ++ M +  V  N   Y+ 
Sbjct: 224 LGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHA 283

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           +M+G+C  G+ N  + +  S+   G   +  +Y +L+ GYC  K +EEA  +  E+  + 
Sbjct: 284 VMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEI--RK 341

Query: 328 IKPTVV---TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            K  VV    +  + +G  ++ + E A +L  EM  + +  +   Y   I+G C
Sbjct: 342 NKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYC 395


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 182/337 (54%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 82  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 141

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 201

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 202 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  + ++P+ ++   +++  CK G +D
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLD 315

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M ++G K D  +Y ++I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMII 375

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 100 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 159

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 160 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 213

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M   +++P+  TY TL+DG C  G ++   E    M     + D+
Sbjct: 274 CKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 333

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 334 VAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKE 393

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 394 MQRDGHVPSVVTYNVLMNG 412



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  K +KP  +TY TL 
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 306 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 344



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DLY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 52  DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 111

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLM 165

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 166 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 225

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 226 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 285

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M     K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 286 IDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQ 345

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D+ TY   I+  C +  V
Sbjct: 346 EGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDV 384



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 104/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 129 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 189 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 248

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM   ++  D  TY T IDG 
Sbjct: 249 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGC 308

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 309 CKEGDLDSAFEHRK 322



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 280


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 213/451 (47%), Gaps = 82/451 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+    K    D    LFK +   G+ PDL  YS LI+ + K G + +G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 67  ---------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                            V++ R+L    +PNVVT+T LIKGLC 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + RI EA  ++ ++   G EP+++TY++LI+G C+ G+      L+++M      I + +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGY 457

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V Y +++DGL K+G +  A    ++M  +++  NVV + SLI G+C  N ++EA  
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 214 LLIEMVDQGVQPNVVS-----------------------------------------SNV 232
           +   M   G++P+V +                                          NV
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           +++ L K  ++++AS+  + +++  + P+  TYNT++ G+C   +++  + +F  ++   
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
              +  +  ILI+  CKN +++ A+ +++ +  KG KP  VTY  L     +    E + 
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           KLF EMQ   ++    +Y   IDGLC R +V
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 47/406 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L ++        ++ ++   G+ P + TYS LI+ FCK G +  GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++  + P+VV +  L+ GL  +  ++ A     K+       NV+ +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY------SIIIDGLCKE-----GF----- 172
                 AL +F+ M    G  G+  KP+  T+      SI+ D  CK      G      
Sbjct: 509 LNRFDEALKVFRLM----GIYGI--KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562

Query: 173 -------------------------VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                                    ++ A + F  +    + P++VTY ++I G+C    
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA+ +   +      PN V+  ++++ LCKN  MD A R+  +M +   +PNA TY  
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LMD F  +  I    +LF  M+  G      SY+I+I+G CK   V+EA +++++     
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + P VV Y  L  G  ++ +   A  L+  M  N V  D    R  
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 10/365 (2%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS--ILINCFCKMGQVSLGFV 67
           P  S   +L  L  +   D +   F +L   G+ P   +    +L   FCK G+V+    
Sbjct: 180 PQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALD 238

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
               ++   F   +V+   ++KGL  + +I  A+ L + +   G  PNV+T+ TLING C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A +LFK M     E      P+ + YS +IDG  K G +    +LF Q  ++ 
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIE------PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  +VV ++S I  +  + D   A  +   M+ QG+ PNVV+  +++  LC++G++  A 
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   +++  + P+  TY++L+DGFC  G +     L+  M  MG   D   Y +L++G 
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K   +  A+    ++  + I+  VV +N+L  G   + + + ALK+F  M    +  D 
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 368 CTYRT 372
            T+ T
Sbjct: 532 ATFTT 536



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 154/312 (49%), Gaps = 12/312 (3%)

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+ +   +   +L    APNVVTF +LI G C    +  A  LF  ++  G EP++I Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G  + G   +   LF +  +         K + V +S  ID   K G +  A  ++
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKG------VKLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNVVTYT LI G C      EA G+  +++ +G++P++V+ + +++  CK 
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G + +   L + M++    P+   Y  L+DG    G +       V M     + +   +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH------GLFEIRQAERALKL 354
           N LI+G+C+    +EAL ++  +   GIKP V T+ T+           +  +    L+L
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559

Query: 355 FVEMQGNDVAAD 366
           F  MQ N ++AD
Sbjct: 560 FDLMQRNKISAD 571



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 169/407 (41%), Gaps = 41/407 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLF--------KRLNSIGLFPDLYTYS----ILINCFCKMG 60
           SF  +   L +N  +D    +F        K  N +G   D    +     L+ C C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN-VITY 119
            V     IF    +        +   ++  L    R+   A  F KL   G EP+ V  +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF-------------------------- 153
             +++ L   G    AL+  + +      +G+V                           
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDC 280

Query: 154 --KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PN VT+  +I+G CK G +D+A +LF  M+   + P+++ Y++LI G+  A      
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L  + + +GV+ +VV  +  ++   K+G +  AS +   M+   + PN  TY  L+ G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G+I     ++  +   G +    +Y+ LI+G+CK   +    +LY ++   G  P 
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VV Y  L  GL +      A++  V+M G  +  +   + + IDG C
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 10/324 (3%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F + G I       +V  F  L++  C    + +A  +F      G      +   ++N 
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT-YSIIIDGLCKEGFVDKAKELFLQMK 184
           L  +    +  + F ++  G  E      P+ V+ +  ++D L  +G V KA +    + 
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                  +V+   ++ G    +    A  LL  ++D G  PNVV+   ++N  CK G+MD
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L  +M Q  + P+   Y+TL+DG+   G +    +LF      G K D   ++  I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + Y K+ ++  A  +Y  +  +GI P VVTY  L  GL +  +   A  ++ ++    + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
               TY + IDG C    +R  +A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFA 447



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   +  IL+  L KN   D  + +F  +   G  P+  TY  L++ F K   +   
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +F  +     +P++V+++ +I GLC   R+ EA  +F +       P+V+ Y  LI G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756

Query: 126 LCRTGHTIVALNLFKEM 142
            C+ G  + A  L++ M
Sbjct: 757 YCKVGRLVEAALLYEHM 773



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 60/116 (51%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   ++  L+   +K+   +    LF+ +   G+ P + +YSI+I+  CK G+V    
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            IF + + +   P+VV +  LI+G C   R+VEAA L+  +   G +P+ +    L
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788


>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
          Length = 1295

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 202/387 (52%), Gaps = 9/387 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P  +++   L  L +++   +     + L+  G     Y ++ +I+ FC  GQV     +
Sbjct: 900  PNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEV 959

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  + +  + P+V +++ L+ GLC +  +++   +  ++   G  PN ++Y++L++GLC+
Sbjct: 960  FHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCK 1019

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            TG   +AL +FK + +        F+ + + YSII+ G C+   +    +L+  M + N+
Sbjct: 1020 TGQVALALKIFKNLQDHG------FEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNI 1073

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P+V  YTSLI+  C   +  +A G+   M++ G+ PN+V+  ++++   K G +  A  
Sbjct: 1074 APDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFL 1133

Query: 249  LLDLMVQC-DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
             LD M Q   + PN   Y  +++G C T K + V  +F  M   G   D   Y+I+I G+
Sbjct: 1134 FLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGF 1193

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
             K  +++EAL LY+++  +G+KP + TY++L +GL    +   A+ L  +M G D+  D 
Sbjct: 1194 VKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDN 1253

Query: 368  CTYRTFIDGLCVRPQVR--FTYARRKG 392
              Y + I   C R  ++     A+R G
Sbjct: 1254 VLYTSIIACYCRRLNMKAAMEMAQRDG 1280



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 152/294 (51%), Gaps = 10/294 (3%)

Query: 87   LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV--ALNLFKEMTN 144
            L+K L   ++I+ A +LF  +K+ G  PNV +Y+ L++       + +  A  L  EM +
Sbjct: 836  LLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMES 895

Query: 145  GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP-NVVTYTSLIHGFC 203
             NG      +PN  TY   + GLC+   V  A + FLQ   ++  P +   + ++IHGFC
Sbjct: 896  -NG-----VRPNATTYGTYLYGLCRSRQVTSAWD-FLQTLSQSGGPCSNYCFNAVIHGFC 948

Query: 204  HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
                 ++A  +   M   G  P+V S +++++ LCK G +     +L+ M +  + PN  
Sbjct: 949  CEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQV 1008

Query: 264  TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            +Y++L+ G C TG++    ++F +++  G +HD  +Y+I+++G C++ +++    L+ ++
Sbjct: 1009 SYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDM 1068

Query: 324  PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
                I P V  Y +L + L   R  + AL +F  M  N ++ +  T    +D  
Sbjct: 1069 IHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSF 1122



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 2/205 (0%)

Query: 176  AKELFLQMKYENLNPNVVTYTSLIHGFCHAND--WNEAKGLLIEMVDQGVQPNVVSSNVI 233
            A+ LF  MK    +PNV +Y+ L+  + H       EA  LL EM   GV+PN  +    
Sbjct: 849  ARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTY 908

Query: 234  MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
            +  LC++ ++ +A   L  + Q     + + +N ++ GFC  G++++  E+F  M+  G 
Sbjct: 909  LYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGY 968

Query: 294  KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
              D  SY+IL++G CK  ++ +   +  E+   GI P  V+Y++L HGL +  Q   ALK
Sbjct: 969  VPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALK 1028

Query: 354  LFVEMQGNDVAADTCTYRTFIDGLC 378
            +F  +Q +    D   Y   + G C
Sbjct: 1029 IFKNLQDHGFEHDQINYSIILHGCC 1053



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 10/297 (3%)

Query: 84   FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
            + ++I+     S   +A   + + K  G +  +   N L+  L      + A +LF +M 
Sbjct: 800  YAAVIRIFVESSMFEDALLTYIQAKNIGVDRRLC--NFLLKCLVEGNQIMYARSLFDDMK 857

Query: 144  NGNGEIGVVFKPNTVTYSIIIDGLC--KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
            +          PN  +YSI++      +   +++A EL  +M+   + PN  TY + ++G
Sbjct: 858  SCGP------SPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYG 911

Query: 202  FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
             C +     A   L  +   G   +    N +++  C  G++D A  +   M +C   P+
Sbjct: 912  LCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPD 971

Query: 262  AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
              +Y+ L+DG C  G + +  ++   M   G   +  SY+ L++G CK  +V  AL ++ 
Sbjct: 972  VHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFK 1031

Query: 322  ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             L   G +   + Y+ + HG  +    +    L+ +M  +++A D   Y + I  LC
Sbjct: 1032 NLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALC 1088



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 5    HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
            H   P V ++  L+  L ++++    L +F+ +   GL P++ T +IL++ F K G V  
Sbjct: 1071 HNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGE 1130

Query: 65   GFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F+   R+ +S    PN+  +  +I GLC  ++      +F  +   G  P+V+ Y+ +I
Sbjct: 1131 AFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIII 1190

Query: 124  NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
             G  +      AL L+ +M +     GV  KPN  TYS +I+GLC +  + +A  L   M
Sbjct: 1191 EGFVKALKLQEALRLYHKMLDE----GV--KPNIFTYSSLINGLCNDDRLPEAMGLIRDM 1244

Query: 184  KYENLNPNVVTYTSLIHGFC 203
              E+L  + V YTS+I  +C
Sbjct: 1245 IGEDLLLDNVLYTSIIACYC 1264


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 193/367 (52%), Gaps = 7/367 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF++LL   A      + L++F  +  +G  P L + + L+N   + G   +  +++G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             +   P+  T   + K  C + R+ +A     +++  G E N++ Y+ +++  C  G T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPN 191
             A  + + +            PN VTY++++ G CK+G +++A+ +  +MK   ++  +
Sbjct: 270 EDARRILESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            V Y  +I+G+C     ++A  +  EM D G+  N+   N ++N LCK G+M+   ++L 
Sbjct: 324 EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQ 383

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    +RP+ ++YNTL+DG+C  G + +  E+   M   G      +YN L+ G+C   
Sbjct: 384 EMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLH 443

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +++AL L+  +  +G+ P  ++ +TL  GLF+  + E+AL L+ E     +A +  T+ 
Sbjct: 444 AIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFN 503

Query: 372 TFIDGLC 378
           T I+GLC
Sbjct: 504 TVINGLC 510



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 42/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +  I+     ++      +   + +  +GL  +L  Y  +++C+C MG       I
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------C 112
              + R   +PNVVT+T L+KG C + R+ EA  +  ++K  G                C
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335

Query: 113 EP--------------------NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +                     N+  YNT+INGLC+ G       + +EM +      V 
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VG 389

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+  +Y+ +IDG C+EG + KA E+   M    L    +TY +L+ GFC  +  ++A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   M+ +GV PN +S + +++ L K GK + A  L    +   +  N  T+NT+++G 
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G++   +EL   M+ + C  D  +Y  L +GYCK  ++  A  L N++   G  P+V
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +N+   G F  +Q  +   +  EM    ++ +  TY   I G C
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWC 615



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 213/455 (46%), Gaps = 90/455 (19%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N ++  L K    + V  + + +  +G+ PD Y+Y+ LI+ +C+ G +   F +   ++
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+  A   +T+ +L+KG C+   I +A  L+  +   G  PN I+ +TL++GL + G T 
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481

Query: 134 VALNLFKE---------------MTNGNGEIGVVFK--------------PNTVTYSIII 164
            ALNL+KE               + NG  +IG + +              P+++TY  + 
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541

Query: 165 DGLCKEGFVDKAKELFLQMKY-----------------------------------ENLN 189
           DG CK G +  A  L  +M++                                     L+
Sbjct: 542 DGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS 601

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PN+VTY +LI G+C   + +EA  L  EMV+ G+ PNV   + +M+   K GK+D A+ +
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661

Query: 250 LDLMVQCDVRPNA--------------------------FTYNTLMDGFCLTGKINRVKE 283
           L  +V  D+ P                              +N ++ G C +G+I   K 
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           LF S+ +     D+F+Y+ LI+G   +  ++EA SL + +   G+ P ++TYN+L +GL 
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC 781

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  +  RA+ LF ++Q   ++ +  TY T ID  C
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 187/375 (49%), Gaps = 5/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S N LL  L ++        ++ ++   G+ PD +T +I+   +C+ G+V+     
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N+V + +++   C      +A  +   L+  G  PNV+TY  L+ G C+
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + KEM    G+I V    + V Y ++I+G C+ G +D A  +  +M+   +
Sbjct: 301 DGRMEEAERVVKEMKE-TGDIVV----DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGI 355

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N+  Y ++I+G C      E + +L EM D G++P+  S N +++  C+ G M  A  
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  +MV+  +     TYNTL+ GFC    I+    L+  M   G   ++ S + L++G  
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  + E+AL+L+ E   +G+   V+T+NT+ +GL +I +   A +L   M+      D+ 
Sbjct: 476 KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535

Query: 369 TYRTFIDGLCVRPQV 383
           TYRT  DG C   Q+
Sbjct: 536 TYRTLFDGYCKLGQL 550



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 191/406 (47%), Gaps = 56/406 (13%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQ 61
           + PS P + S   LL  LA+ + +    +L   L  ++  LFP L               
Sbjct: 93  LAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL--------------- 137

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                     + R  F  + V+F  L++      ++  A  +F  +   GC P++ + N 
Sbjct: 138 --------AEVYRD-FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 122 LINGLCRTGHTIVALNLFKEMTNG------------------NGEI-----------GVV 152
           L+N L ++G   +A  ++ +M                     +G +           G+ 
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            + N V Y  ++D  C  G+ + A+ +   ++ + L+PNVVTYT L+ G+C      EA+
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 213 GLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            ++ EM + G +  + V+  +++N  C+ G+MD+A+R+ + M    +  N F YNT+++G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G++  V+++   ME +G + D +SYN LI+GYC+   + +A  +   +   G+  T
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +TYNTL  G   +   + AL+L+  M    VA +  +  T +DGL
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL 474



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 195/435 (44%), Gaps = 71/435 (16%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N LL         D  L L+  +   G+ P+  + S L++   K G+      ++   
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    A NV+TF ++I GLC   R+ EA  L  ++K   C P+ +TY TL +G C+ G  
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 133 IVALNLFKEM----------------------------TNGNGEIGVV-FKPNTVTYSII 163
             A +L  +M                             + + E+      PN VTY  +
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I G CKEG + +A  L+ +M    +NPNV   ++L+  F      +EA  +L ++V+  +
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670

Query: 224 QP----------------------NVVSSNVIMN----ELCKNGKMDNASRLLDLMVQCD 257
            P                      N  S+NV+ N     LCK+G++ +A  L + +    
Sbjct: 671 IPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKR 730

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             P+ FTY++L+ G   +G I+    L   M S G   +  +YN LI G CK+ ++  A+
Sbjct: 731 FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAV 790

Query: 318 SLYNELPFKGIKPTVVTYNTLFH---------GLFEIRQA-------ERALKLFVEMQGN 361
           +L+N+L  KGI P  +TYNTL             F+++Q        E A+KL  +M  N
Sbjct: 791 NLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIEN 850

Query: 362 DVAADTCTYRTFIDG 376
           +V  +  TY T I G
Sbjct: 851 NVDPNYITYCTLIHG 865



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 48/391 (12%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FN ++  L K         L  R+  +   PD  TY  L + +CK+GQ+     +  
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++    FAP+V  F S I G     +  +   + +++ A G  PN++TY  LI G C+ G
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A NL+ EM N NG       PN    S ++    KEG VD+A  +  ++   ++ P
Sbjct: 619 NLHEACNLYFEMVN-NG-----MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 191 NV--------------------------VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
                                       V +  +I G C +    +AK L   + ++   
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+  + + +++    +G +D A  L D+M+   + PN  TYN+L+ G C +GK++R   L
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKE----------------VEEALSLYNELPFKGI 328
           F  ++S G   +  +YN LI+ YCK  +                +EEA+ L +++    +
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNV 852

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
            P  +TY TL HG  +    E   KL+ EM 
Sbjct: 853 DPNYITYCTLIHGYIKSGNMEEISKLYDEMH 883



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--------------NVITYNTLIN 124
           P++V+   L+  L    R  +A AL + L     EP              + ++++ L+ 
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                G    ALN+F    +G G++G   +P+  + + +++ L + G    A  ++ QM+
Sbjct: 157 AHADAGQLSSALNVF----DGMGKVGC--RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P+  T   +   +C      +A   + EM   G++ N+V+ + +M+  C  G  +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNIL 303
           +A R+L+ + +  + PN  TY  L+ G+C  G++   + +   M+  G    D+ +Y ++
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           INGYC+   +++A  + NE+   GI   +  YNT+ +GL ++ + E   K+  EM+   +
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 364 AADTCTYRTFIDGLCVRPQVRFTY 387
             D  +Y T IDG C    +R  +
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAF 414


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 208/436 (47%), Gaps = 60/436 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN+L+  L +++ +D  L LF+++   G  P+ +T  IL+   C+ G V     +
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                 SC   N V + +L+   C E    EA  L  ++   G  P+V+T+N+ I+ LCR
Sbjct: 208 VNNN-NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCR 266

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  +F++M   + E+G+  +PN VT+++++ G CK G +  A+ L   MK    
Sbjct: 267 AGKVMEASRIFRDM-QMDAELGLP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++  Y   + G     +  EA+ +L EMV +G++PN  + N++M+ LC+N  + +A  
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--------------- 293
           L+DLM++  V P+   Y+TL+ G+C  GK+   K +   M   GC               
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 294 --------------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK---- 329
                               + D  + NI++NG C+N E+++A  + +E+   G      
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 330 ------------------PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
                             P  +TY TL +GL ++ + E A K F+EM   ++  D+ TY 
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 372 TFIDGLCVRPQVRFTY 387
           TFI   C + ++   +
Sbjct: 565 TFIWSFCKQGKISSAF 580



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 32/401 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+    + +  +    L +R+N +G+ PD+ T++  I+  C+ G+V     IF  + 
Sbjct: 222 YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQ 281

Query: 74  RSCF----APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                    PNVVTF  ++KG C    + +A  L   +K  G   ++  YN  + GL R 
Sbjct: 282 MDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRN 341

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G  + A  +  EM      +    +PN  TY+I++DGLC+   +  A+ L   M    + 
Sbjct: 342 GELLEARLVLDEM------VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVY 395

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ V Y++L+HG+C      EAK +L EM+  G QPN  + N +++ L K G+   A  +
Sbjct: 396 PDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEM 455

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG----------------- 292
           L  M +   +P+  T N +++G C  G++++  E+   M + G                 
Sbjct: 456 LQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSI 515

Query: 293 -----CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
                C  D  +Y  LING CK   +EEA   + E+  K ++P  VTY+T      +  +
Sbjct: 516 HNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGK 575

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              A ++  +M+ N  +    TY   I GL    Q+   Y 
Sbjct: 576 ISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYG 616



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 187/361 (51%), Gaps = 19/361 (5%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +NI L  L +N        +   + + G+ P+ YTY+I+++  C+   +S    +   ++
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+   P+ V +++L+ G C+  ++ EA ++  ++   GC+PN  T NTL++ L + G T+
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  + ++M          ++P+TVT +I+++GLC+ G +DKA E+  +M + N  P   
Sbjct: 451 EAEEMLQKMNEK------CYQPDTVTCNIVVNGLCRNGELDKASEIVSEM-WTN-GP--- 499

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
             TSL  G   A+  N    +          P+ ++   ++N LCK G+++ A +    M
Sbjct: 500 --TSLDKGNSFASLINSIHNV------SNCLPDGITYTTLINGLCKVGRLEEAKKKFIEM 551

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +  ++RP++ TY+T +  FC  GKI+    +   ME  GC     +YN LI G   N ++
Sbjct: 552 LAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQI 611

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            E   L +E+  KGI P + TYN +   L E  +A+ A+ L  EM    ++ +  +++  
Sbjct: 612 FEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKIL 671

Query: 374 I 374
           I
Sbjct: 672 I 672



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 166/343 (48%), Gaps = 23/343 (6%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCF---APNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           ++    ++G V      F + LR+ F   +P++  +  L++      R    + L++ + 
Sbjct: 84  MVRVLAQLGHVDDAITHF-KSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDML 142

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
           A    P   T+N LI+ LC +     AL LF++M     + G    PN  T  I++ GLC
Sbjct: 143 AARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMP----QKGCC--PNEFTLGILVRGLC 196

Query: 169 KEGFVDKAKELFLQMKYENLN----PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           + G V +A EL       N N     N V Y +L+  FC     NEA+ L+  M + GV 
Sbjct: 197 RAGLVKQALELV-----NNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVL 251

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDV---RPNAFTYNTLMDGFCLTGKINR 280
           P+VV+ N  ++ LC+ GK+  ASR+  D+ +  ++   RPN  T+N ++ GFC  G +  
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + L  +M+ +G       YNI + G  +N E+ EA  + +E+  KGI+P   TYN +  
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           GL        A  L   M  N V  DT  Y T + G C R +V
Sbjct: 372 GLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 167/383 (43%), Gaps = 32/383 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N LL  L K         + +++N     PD  T +I++N  C+ G++     I
Sbjct: 431 PNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEI 490

Query: 69  FGRILRS---------CFA-------------PNVVTFTSLIKGLCAESRIVEAAALFTK 106
              +  +          FA             P+ +T+T+LI GLC   R+ EA   F +
Sbjct: 491 VSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIE 550

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           + A    P+ +TY+T I   C+ G    A  + K+M   NG           TY+ +I G
Sbjct: 551 MLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMER-NG-----CSKTLQTYNALILG 604

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           L     + +   L  +MK + ++P++ TY ++I   C      +A  LL EM+D+G+ PN
Sbjct: 605 LGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPN 664

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V S  +++    K+     A  L ++ +    R  A  Y+ + +     G+++  KELF 
Sbjct: 665 VSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL-YSLMFNELLAGGQLSEAKELFE 723

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE-- 344
                     +F Y  LI   C+++ + +A SL  +L  KG      ++  +  GL +  
Sbjct: 724 VSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRG 783

Query: 345 -IRQAERALKLFVEMQGNDVAAD 366
             RQA+   K  +E++  D   D
Sbjct: 784 NKRQADELAKRMMELELEDRPVD 806



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 30/215 (13%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N L+  L  N     +  L   +   G+ PD+ TY+ +I C C+ G+      +  
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L    +PNV +F  LIK     S    A  LF ++    C      Y+ + N L   G
Sbjct: 655 EMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSLMFNELLAGG 713

Query: 131 HTIVALNLF---------------KEMTNGNGEIGVVFKPNTVTYSII------------ 163
               A  LF               K++     +   +   N++ Y +I            
Sbjct: 714 QLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFM 773

Query: 164 --IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
             IDGL K G   +A EL  +M    L    V  T
Sbjct: 774 PVIDGLSKRGNKRQADELAKRMMELELEDRPVDRT 808


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 185/381 (48%), Gaps = 7/381 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L +       LS+   +   G  PD+ TY+IL+   CK       
Sbjct: 2   PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 61

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN VT+  L+ G+C E  + +A  L   L + GC+P+ + YNT++ G
Sbjct: 62  MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM   N        PN  T++++I  LC++G + +A +L  +M  
Sbjct: 122 LCSAERWGDADELVTEMLREN------CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 175

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                N+VTY ++I+G C   + + A GLL +M   G +P++V+ N ++  LC   +  +
Sbjct: 176 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD 235

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+D M Q    P+  T+NTL+   C  G +    E+F  M   GC  +  +Y+ +I+
Sbjct: 236 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 295

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G  K  ++++AL L+NE+  KG  P  + Y  L   L +    E A++   ++Q + ++ 
Sbjct: 296 GLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISP 354

Query: 366 DTCTYRTFIDGLCVRPQVRFT 386
            T  Y   + GLC   +  F 
Sbjct: 355 HTVLYNAILLGLCRNGKTEFA 375



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL    K + Y   + L   + + G  P+  TY++L++  C  G V     +
Sbjct: 40  PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 99

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V + +++KGLC+  R  +A  L T++    C PN  T+N +I  LCR
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L ++M+            N VTY+ II+GLC++  VD A  L  +MK    
Sbjct: 160 KGLLQQAIQLLEKMSKHG------CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 213

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L+ G C A  W +A+ L+  M   G  P+ V+ N ++  LC+ G M +A  
Sbjct: 214 KPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 273

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M      PN+ TY+T++ G     K+++  ELF  M   G   D   Y +L     
Sbjct: 274 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLN 332

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  +EEA+    +L   GI P  V YN +  GL    + E A+ +   M  +    D  
Sbjct: 333 DDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 392

Query: 369 TYRTFIDGL 377
           TY   I+GL
Sbjct: 393 TYVILIEGL 401



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 7/315 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N +L  L   + +     L   +      P+  T++++I   C+ G +  
Sbjct: 106 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 165

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++ +     N+VT+ ++I GLC +  +  A  L +K+K++GC+P+++TYNTL+ 
Sbjct: 166 AIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK 225

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC     + A  L   MT  NG +     P+ VT++ +I  LC++G +  A E+F QM 
Sbjct: 226 GLCSAARWVDAEELMDNMTQ-NGCL-----PDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +   PN +TY+++I G   A   ++A  L  EM  +G  P+ +   ++   L  +  ++
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQ-LLAECLNDDDTIE 338

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A + +  +    + P+   YN ++ G C  GK     ++   M S GC  DD +Y ILI
Sbjct: 339 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398

Query: 305 NGYCKNKEVEEALSL 319
            G      + EA  L
Sbjct: 399 EGLAYEGYLNEAREL 413



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 28/250 (11%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H     + ++N ++  L + ++ D  + L  ++ S G  PD+ TY+ L+   C   +   
Sbjct: 176 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD 235

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +   + ++   P+ VTF +LI  LC +  +V+A  +F ++   GC PN ITY+T+I+
Sbjct: 236 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 295

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFK----------------------------PN 156
           GL +      AL LF EM +       +++                            P+
Sbjct: 296 GLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 355

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
           TV Y+ I+ GLC+ G  + A ++   M      P+ +TY  LI G  +    NEA+ LLI
Sbjct: 356 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 415

Query: 217 EMVDQGVQPN 226
           ++  + V  N
Sbjct: 416 KLCSRDVLVN 425


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 173/346 (50%), Gaps = 7/346 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
            LF+ + S GL P++  Y+ ++    K G+      I G +     +P+V  + ++I G 
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C   ++ E  +   ++ A G +PNV TY   I+G CR G    A   F EM +       
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG----- 577

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PN V  + +IDG CK+G   KA   F  M  + + P+V T++ LIHG        EA
Sbjct: 578 -IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
            G+  E++D+G+ P+V +   +++ LCK G +  A  L D M +  + PN  TYN L++G
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C  G+I + +ELF  +   G   +  +Y+ +I GYCK+  + EA  L++ +   G+ P 
Sbjct: 697 LCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPD 756

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              Y  L  G  +    E+AL LF+ M    +A+ T  +   IDG 
Sbjct: 757 SFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGF 801



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 200/414 (48%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++++++  L +    D  L L + + + GL PD Y Y+ LI+ FC+  + + G  +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V +T+LI G   +S I  A  +  ++ A   + N  TY  LI+GLC+
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +LF EMT     +G+  KP+  TY+ +I+G  K   ++KA EL +++K ENL
Sbjct: 385 IGDLEKAEDLFSEMT----MMGI--KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N     ++++G CH  D   A  L  EM+  G++PN+V    I+  L K G+ + A +
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIK 498

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L +M    + P+ F YNT++ GFC  GK+   K   V M + G K + ++Y   I+GYC
Sbjct: 499 ILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558

Query: 309 KNKEVEEALSLYNELPFKGIKPT-----------------------------------VV 333
           +  E++ A   + E+   GI P                                    V 
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           T++ L HGL +  + + A+ +F E+    +  D  TY + I  LC    ++  +
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 180/379 (47%), Gaps = 31/379 (8%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLG-FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
            + PD+YTY+ LIN +C++G+V  G  V+F    + C  PN+VT++ +I GLC    + E
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI-PNLVTYSVVIAGLCRAGDVDE 285

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM---------------TN 144
           A  L   +   G  P+   Y TLI+G CR   +    ++  EM                N
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 145 G---NGEIGVVF-----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           G     +IG  F           K NT TY  +I GLCK G ++KA++LF +M    + P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++ TY  LI G+    +  +A  LLIE+  + +  N      I+N LC  G +  A+ L 
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF 465

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M+   ++PN   Y T++ G    G+     ++   M+  G   D F YN +I G+CK 
Sbjct: 466 QEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA 525

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            ++EE  S   E+  KG+KP V TY    HG     + + A + F+EM  + +A +    
Sbjct: 526 GKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVIC 585

Query: 371 RTFIDGLCVRPQVRFTYAR 389
              IDG C        +A+
Sbjct: 586 TDLIDGYCKDGNTTKAFAK 604



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+  L K    +    LF  +  +G+ PD+ TY+ LI  + K+  +   + +   I
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            +     N     +++ GLC    +  A  LF ++ ++G +PN++ Y T++ GL + G  
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ +   M +          P+   Y+ +I G CK G +++ K   ++M  + L PNV
Sbjct: 494 EEAIKILGVMKDQG------LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY + IHG+C A +   A+   IEM+D G+ PN V    +++  CK+G    A      
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   V P+  T++ L+ G    GK+     +F  +   G   D F+Y  LI+  CK  +
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A  L++++  KGI P +VTYN L +GL ++ +  +A +LF  +    +A ++ TY T
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 373 FIDGLC 378
            I G C
Sbjct: 728 IIAGYC 733



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K ++ +    L   +    L  + Y    ++N  C  G ++    +
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN+V +T+++KGL  E R  EA  +   +K  G  P+V  YNT+I G C+
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G      +   EM      I    KPN  TY   I G C+ G +  A+  F++M    +
Sbjct: 525 AGKMEEGKSYLVEM------IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V  T LI G+C   +  +A      M+DQGV P+V + +V+++ L KNGK+  A  
Sbjct: 579 APNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   ++   + P+ FTY +L+   C  G +    EL   M   G   +  +YN LING C
Sbjct: 639 VFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLC 698

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  E+ +A  L++ +P KG+    VTY+T+  G  +      A +LF  M+   V  D+ 
Sbjct: 699 KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSF 758

Query: 369 TYRTFIDGLC 378
            Y   IDG C
Sbjct: 759 VYCALIDGCC 768



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 190/424 (44%), Gaps = 59/424 (13%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V + ++L+  L+KN      + +F  L   GL PD++TY+ LI+  CK G +   F +
Sbjct: 615  PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL 674

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               + +    PN+VT+ +LI GLC    I +A  LF  +   G   N +TY+T+I G C+
Sbjct: 675  HDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-- 186
            + +   A  LF    +G   +GV   P++  Y  +IDG CK G  +KA  LFL M  E  
Sbjct: 735  SANLTEAFQLF----HGMKLVGV--PPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 187  --------------------------------NLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                                            ++ PN VTYT LI   C   +  EA+ L
Sbjct: 789  ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848

Query: 215  LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +EM  + V PNV++   +++   + G+      L D MV   ++P+   ++ ++D    
Sbjct: 849  FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLK 908

Query: 275  TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             G   +  +L   M S G       Y ILI+  CK+  + E L + +E+  +G K ++ T
Sbjct: 909  EGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968

Query: 335  YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNS 394
              TL        + + AL++   M            R+F++ L         ++ R GN 
Sbjct: 969  CGTLVCCFHRAGRTDEALRVLESM-----------VRSFLNLL--------EFSVRNGNR 1009

Query: 395  GNTN 398
            G +N
Sbjct: 1010 GKSN 1013



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 148/337 (43%), Gaps = 54/337 (16%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R+ F+ N+ TF+ L   LC       AA +  ++      P+V   +++I          
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTR-NPHVKILDSIIK--------- 149

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN------ 187
                +KE+       G     + V + I+ID   K+GF+++A  +FL  K         
Sbjct: 150 ----CYKEIN------GSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLA 199

Query: 188 ----------------------------LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
                                       + P+V TYT+LI+ +C      E K +L +M 
Sbjct: 200 CCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDME 259

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++G  PN+V+ +V++  LC+ G +D A  L   M    + P+ + Y TL+DGFC   +  
Sbjct: 260 EKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRST 319

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             K +   M +MG K D  +Y  LING+ K  ++  A  +  E+  + IK    TY  L 
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALI 379

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           HGL +I   E+A  LF EM    +  D  TY   I+G
Sbjct: 380 HGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEG 416


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 159/299 (53%), Gaps = 6/299 (2%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P++VT+  ++ G+C E R+ +A      L ++GCEPN ++YN ++ GLC       A  L
Sbjct: 25  PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
             EM    G+ G    PN VT++++I  LC++G V+ A E+  Q+      PN ++Y  L
Sbjct: 85  MGEM----GQKGC--PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 138

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +H FC     ++A   L  MV +G  P++VS N ++  LC++G++D A  LL  +     
Sbjct: 139 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 198

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            P   +YNT++DG    GK     EL   M S G + D  +Y+ +  G C+   +E+A+ 
Sbjct: 199 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 258

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + ++   GI+P  V YN +  GL + R+   A+ LF  M GN    +  TY   I+GL
Sbjct: 259 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 317



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 6/291 (2%)

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  S   +A  L  +++  GC P+++TYN ++NG+C+ G    A+   K + +   E   
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE--- 59

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PNTV+Y+I++ GLC     + A+EL  +M  +   PNVVT+  LI   C       A
Sbjct: 60  ---PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L ++   G  PN +S N +++  CK  KMD A   LDLMV     P+  +YNTL+  
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C +G+++   EL   ++  GC     SYN +I+G  K  + +EAL L NE+  KG++P 
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
           ++TY+T+  GL    + E A++ F ++Q   +  +T  Y   I GLC R +
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 287



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 6/320 (1%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           K   Y   + L   +   G  PD+ TY++++N  C+ G+V         +      PN V
Sbjct: 4   KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           ++  ++KGLC   R  +A  L  ++   GC PNV+T+N LI+ LCR G    AL + +++
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                       PN+++Y+ ++   CK+  +DKA      M      P++V+Y +L+   
Sbjct: 124 PKYG------CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 177

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C + + + A  LL ++ D+G  P ++S N +++ L K GK   A  LL+ MV   ++P+ 
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY+T+  G C   +I      F  ++ MG + +   YN +I G CK +E   A+ L+  
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297

Query: 323 LPFKGIKPTVVTYNTLFHGL 342
           +   G  P   TY  L  GL
Sbjct: 298 MIGNGCMPNESTYTILIEGL 317



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 126/245 (51%), Gaps = 8/245 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN+L+  L +    +  L + +++   G  P+  +Y+ L++ FCK  ++     
Sbjct: 94  PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 153

Query: 68  IFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
               ++ R C+ P++V++ +L+  LC    +  A  L  +LK  GC P +I+YNT+I+GL
Sbjct: 154 FLDLMVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G T  AL L  EM +         +P+ +TYS I  GLC+E  ++ A   F +++  
Sbjct: 213 TKAGKTKEALELLNEMVSKG------LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 266

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PN V Y ++I G C   + + A  L   M+  G  PN  +  +++  L   G +  A
Sbjct: 267 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 326

Query: 247 SRLLD 251
             LLD
Sbjct: 327 RDLLD 331


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 197/434 (45%), Gaps = 76/434 (17%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+  L KN      + +   + +IG+  D  TY  L+  FC+M ++ +   I   ++
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R  F P+    + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 378

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LFKEM  G G      +PN VTY+I+I  LCK G ++ A  LF +M+ + +   V 
Sbjct: 379 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------------ 241
            Y SLI+G+C     + A+GLL  MV +G+ P   S + ++  LC+NG            
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 242 -----------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                  KMD A+RL D M+  +V PN  T+N +++G+CL G I
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 552

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA---------------------- 316
            +  +L+  M  MG K D+++Y  LI+G C    V +A                      
Sbjct: 553 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 612

Query: 317 -------------LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
                          L++E+  +G+K  +V++  + +   +    E++  LF EM+   V
Sbjct: 613 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672

Query: 364 AADTCTYRTFIDGL 377
             D   Y   ID L
Sbjct: 673 KPDDIFYTCMIDAL 686



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 33/398 (8%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +L  L K + +     LF ++   G+  D Y Y+  I  +C+   +     +  R+    
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 251

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
              + V +  L+ GLC   R+ EA  +   +   G   + +TY TL+ G CR     +AL
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 311

Query: 137 NLFKEM-------TNGN------------------------GEIGVVFKPNTVTYSIIID 165
            +  +M       +  N                        G++G+V  PN   Y+ +ID
Sbjct: 312 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV--PNVFAYNALID 369

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
            LCK    D A  LF +M    L PN VTY  LIH  C      +A  L  +M D+G++ 
Sbjct: 370 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 429

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
            V   N ++N  CK G +D A  LL  MV+  + P A +Y+ L+ G C  G ++   EL 
Sbjct: 430 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 489

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G   +++++  LING+CK+K+++EA  L++++    + P  VT+N +  G   +
Sbjct: 490 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 549

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +A +L+ +M    +  D  TYR+ I GLC+   V
Sbjct: 550 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 587



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S++ L+  L +N    + + L + +   G+  + YT++ LIN FCK  ++     +
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF  +I+G C    I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 129 TGHTIVALNLFKEMTNGNG----------------------------EIGVV-FKPNTVT 159
           T     A     ++ N                               E+ V   K + V+
Sbjct: 584 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 643

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++II+    K+   +K+  LF +MK + + P+ + YT +I       +  +A     +MV
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 703

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  PN V+  V++N LCK+G + +A  L   M+  +V PN FTYN  +D F   G + 
Sbjct: 704 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 763

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K+L  +M   G      S+NILI G CK  +++EA+ L +++   G  P  ++Y+T+ 
Sbjct: 764 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           H L ++    +A +L+ EM    +  D   Y  FI
Sbjct: 823 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 178/375 (47%), Gaps = 29/375 (7%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S G+  + YT S ++    K+ Q +L   +F ++L+S    +   +T+ I+  C    + 
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 238

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-------------- 144
            A  L  ++++ G + + + YN L+ GLC+      A+ +   M N              
Sbjct: 239 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 298

Query: 145 ---------------GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                           +  I + F P+    S +ID L K+  V++A  L  ++    + 
Sbjct: 299 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 358

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV  Y +LI   C    +++A  L  EM  +G++PN V+  ++++ LCK G +++A  L
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 418

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D M    ++   + YN+L++G+C  G ++R + L   M   G      SY+ LI G C+
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N ++   + L+ E+  +GI     T+  L +G  + ++ + A +LF +M  ++V  +  T
Sbjct: 479 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538

Query: 370 YRTFIDGLCVRPQVR 384
           +   I+G C+   +R
Sbjct: 539 FNVMIEGYCLVGNIR 553



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF I++    K    +    LF+ +   G+ PD   Y+ +I+   K   +      + ++
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 702

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   ++PN VT T LI  LC    +  A  L  ++ A    PN  TYN  ++     G  
Sbjct: 703 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 762

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L   M  G+         + V+++I+I GLCK G + +A +L  ++     +P+ 
Sbjct: 763 EKAKDLHSAMLQGH-------LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 815

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           ++Y+++IH  C   D N+A  L  EM+ +G++P+VV+ N+ +     +G+ D A  +   
Sbjct: 816 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 875

Query: 253 MVQCDVRPNAFTYNTLMDGFCL 274
           M++  V+PN  TY  L+ G  L
Sbjct: 876 MIRSGVQPNWDTYRALLSGISL 897



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%)

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G+  N  +++ I+  L K  +   A  L D M+Q  V  + + Y   +  +C +  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +  + L V MES G K     YN+L+ G CKN  V+EA+ + N +   G+    VTY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 339 FHGLFEIRQAERALKLFVEM 358
            +G   + + E AL++  +M
Sbjct: 298 VYGFCRMEELEMALRITHDM 317



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%)

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L L +   +  N +T + ++       +    ++LF  M   G   D++ Y   I  YC
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +++ ++ A  L   +  +G+K + V YN L +GL +  + + A+++   M    V AD  
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292

Query: 369 TYRTFIDGLC 378
           TYRT + G C
Sbjct: 293 TYRTLVYGFC 302


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 182/372 (48%), Gaps = 6/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  ++  L +    D  +SLFK++     +P + TY+++I+      +   G  +F  +
Sbjct: 286 SYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM 345

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PNV T+T ++  +C E ++ E+  +  ++   G  P+V+TYN LI G C  G  
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL +   M + N       +PN  TY+ +I G  K   V KA  L  +M    L P++
Sbjct: 406 EAALEILGLMESNNC------RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY SLIH  C A  ++ A  LL  + + G+ P+  + +V ++ LCK+ +M+ A  L + 
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  ++ N   Y  L+DG C  GKI+    L   M S  C  +  +YN LI G CK  +
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+E LS+   +   G+KPTV TY  L   +      + A ++F +M       D  TY  
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 373 FIDGLCVRPQVR 384
           FI   C    V+
Sbjct: 640 FIHTYCTSGNVK 651



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 198/409 (48%), Gaps = 41/409 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N LL  LA+    D +  ++  + +  + P++YT + ++N + KMG +    +   
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           +I ++  +P+  T+TSLI G C  + +  A  +F  +   GC  N ++Y T+I+GLC  G
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                ++LFK+M   +        P   TY++II  L       +  +LF +M+  +  P
Sbjct: 299 RIDEGISLFKKMREDDC------YPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEP 352

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NV TYT ++   C     +E++ +L EM+++G+ P+VV+ N ++   C+ G+++ A  +L
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412

Query: 251 DLMVQCDVRPNAFTYNTLMDGF-----------------------------------CLT 275
            LM   + RPN  TYN L+ GF                                   C  
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G  +   +L   ++  G   D ++Y++ I+  CK+K +EEA  L+N L  KGIK   V Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             L  G  +  + + A+ L   M   D   ++ TY + I G+C   +V+
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ 581



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 201/393 (51%), Gaps = 18/393 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  +++LG   +N   ++   +F  + + G   +  +Y+ +I+  C+ G++  G 
Sbjct: 246 SPDSFTYTSLILG-YCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F ++      P V T+T +I  L    R +E   LF +++   CEPNV TY  +++ +
Sbjct: 305 SLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAM 364

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      +  +  EM     E G+V  P+ VTY+ +I G C+EG ++ A E+   M+  
Sbjct: 365 CKERKLDESRRILNEMM----EKGLV--PSVVTYNALIRGYCEEGRIEAALEILGLMESN 418

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N  PN  TY  LI GF      ++A  LL +M++  + P++V+ N +++  CK G  D+A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +LLDL+ +  + P+ +TY+  +D  C + ++    +LF S++  G K ++  Y  LI+G
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK  +++EA+SL   +  +   P   TYN+L +G+ +  + +  L +   M    V   
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598

Query: 367 TCTYRTFIDGLCVRPQVRFTYARRKGNSGNTNR 399
             TY   I+ +            R+G+  + NR
Sbjct: 599 VATYTILIEEML-----------REGDFDHANR 620



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 173/335 (51%), Gaps = 13/335 (3%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++  +L     PN+ T  +++        IVEA    +K+   G  P+  TY +LI G C
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R      A  +F  M N         + N V+Y+ II GLC+ G +D+   LF +M+ ++
Sbjct: 261 RNNDVNSAYKVFNMMPNKGC------RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 188 LNPNVVTYTSLIHGFCHANDWN-EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             P V TYT +IH     ND N E   L  EM ++  +PNV +  V+++ +CK  K+D +
Sbjct: 315 CYPTVRTYTVIIHAL-FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+L+ M++  + P+  TYN L+ G+C  G+I    E+   MES  C+ ++ +YN LI G
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + K K V +A++L +++    + P++VTYN+L H   +    + A KL   ++ N +  D
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493

Query: 367 TCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
             TY  FID LC   ++      F   + KG   N
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  L  N      + LF  +      P+++TY+++++  CK  ++     I
Sbjct: 317 PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVT+ +LI+G C E RI  A  +   +++  C PN  TYN LI G  +
Sbjct: 377 LNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             H   A+ L  +M            P+ VTY+ +I   CK G  D A +L   +K   L
Sbjct: 437 RKHVHKAMTLLSKMLESK------LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TY+  I   C +    EA  L   + ++G++ N V    +++  CK GK+D A  
Sbjct: 491 VPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAIS 550

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M   D  PN+ TYN+L+ G C  GK+     +  +M  MG K    +Y ILI    
Sbjct: 551 LLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEML 610

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  + + A  ++N++   G KP V TY    H        + A  +   M    V  D+ 
Sbjct: 611 REGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSL 670

Query: 369 TYRTFIDG 376
           TY   I  
Sbjct: 671 TYTLLISA 678



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 167/350 (47%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++  + K +  D    +   +   GL P + TY+ LI  +C+ G++     I
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +  +   PN  T+  LI G      + +A  L +K+      P+++TYN+LI+  C+
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   A  L  ++   NG +     P+  TYS+ ID LCK   +++A +LF  +K + +
Sbjct: 472 AGHFDSAYKLL-DLLKENGLV-----PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N V YT+LI G C A   +EA  LL  M  +   PN  + N ++  +CK GK+     
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +++ M +  V+P   TY  L++     G  +    +F  M S G K D ++Y   I+ YC
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYC 645

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +  V+EA  +   +   G+ P  +TY  L      +  A  A  +   M
Sbjct: 646 TSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRM 695



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 6/296 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+   +K KH    ++L  ++    L P L TY+ LI+  CK G     + +
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P+  T++  I  LC   R+ EA  LF  LK  G + N + Y  LI+G C+
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L + M + +        PN+ TY+ +I G+CKEG V +   +   M    +
Sbjct: 542 AGKIDEAISLLERMHSEDC------LPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V TYT LI       D++ A  +  +MV  G +P+V +    ++  C +G +  A  
Sbjct: 596 KPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEG 655

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           ++  M++  V P++ TY  L+  +   G       +   M   GC      +N LI
Sbjct: 656 MMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 133/284 (46%), Gaps = 37/284 (13%)

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           L+  ++M   + +I   FK +  +Y+ ++  L +   +D+ K ++ +M  + + PN+ T 
Sbjct: 160 LDFLRQMNRDDNDIK--FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTL 217

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            ++++ +    +  EA   + ++   G+ P+  +   ++   C+N  +++A ++ ++M  
Sbjct: 218 NTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPN 277

Query: 256 CDVRPNAFTYNTLMDGFCLTGKIN-------RVKE------------------------- 283
              R N  +Y T++ G C  G+I+       +++E                         
Sbjct: 278 KGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE 337

Query: 284 ---LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              LF  M    C+ +  +Y ++++  CK ++++E+  + NE+  KG+ P+VVTYN L  
Sbjct: 338 GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIR 397

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           G  E  + E AL++   M+ N+   +  TY   I G   R  V 
Sbjct: 398 GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 178/336 (52%), Gaps = 6/336 (1%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P+ + +++L++ FCK+G V    ++F  I +    P VV+F +LI G C    + E 
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L   +++    P+V T++ LINGLC+ G       LF EM  G G +     PN VT+
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC-GKGLV-----PNGVTF 250

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           +++IDG CK G VD A + F  M  + + P++VTY +LI+G C   D  EA+ L+ EM  
Sbjct: 251 TVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSA 310

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G++P+ ++   +++  CK G M++A  +   MV+  +  +   +  L+ G C  G+++ 
Sbjct: 311 SGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHD 370

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
            + +   M S G K DD +Y ++++ +CK   V     L  E+   G  P VVTYN L +
Sbjct: 371 AERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMN 430

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           GL +  Q + A  L   M    VA +  TY   ++G
Sbjct: 431 GLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG 466



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 6/324 (1%)

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   +  +  +L S + PN   F  L+ G C    +  A  +F ++   G  P V+++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G C+ G       L   M +          P+  T+S +I+GLCKEG +D+   LF
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESER------VCPDVFTFSALINGLCKEGRLDEGSLLF 235

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + L PN VT+T LI G C     + A      M+ QGV+P++V+ N ++N LCK 
Sbjct: 236 DEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 295

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +  A RL++ M    +RP+  T+ TL+DG C  G +    E+   M   G + DD ++
Sbjct: 296 GDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAF 355

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            +LI+G C++  V +A  +  ++   G KP   TY  +     +        KL  EMQ 
Sbjct: 356 TVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQS 415

Query: 361 NDVAADTCTYRTFIDGLCVRPQVR 384
           +       TY   ++GLC + QV+
Sbjct: 416 DGHVPGVVTYNALMNGLCKQGQVK 439



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 6/302 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN L+    K    +    L   + S  + PD++T+S LIN  CK G++  G ++
Sbjct: 175 PTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLL 234

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VTFT LI G C   ++  A   F  + A G  P+++TYN LINGLC+
Sbjct: 235 FDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 294

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM+          +P+ +T++ +IDG CK G ++ A E+  +M  E +
Sbjct: 295 VGDLKEARRLVNEMSASG------LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGI 348

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +T LI G C     ++A+ +L +M+  G +P+  +  ++++  CK G +    +
Sbjct: 349 ELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFK 408

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M      P   TYN LM+G C  G++   K L  +M ++G   +D +YNIL+ G+ 
Sbjct: 409 LLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHS 468

Query: 309 KN 310
           K+
Sbjct: 469 KH 470



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 29/262 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F+ L+  L K    D    LF  +   GL P+  T+++LI+  CK G+V L    
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKN 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P++VT+ +LI GLC    + EA  L  ++ A G  P+ IT+ TLI+G C+
Sbjct: 270 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVT 159
            G    AL + + M     E+  V                             FKP+  T
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPT 389

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++++D  CK+G V    +L  +M+ +   P VVTY +L++G C       AK LL  M+
Sbjct: 390 YTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAML 449

Query: 220 DQGVQPNVVSSNVIMNELCKNG 241
           + GV PN ++ N+++    K+G
Sbjct: 450 NVGVAPNDITYNILLEGHSKHG 471



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +F +L+  L ++        + + + S G  PD  TY+++++CFCK G V +GF +   +
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P VVT+ +L+ GLC + ++  A  L   +   G  PN ITYN L+ G  + G +
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS 473

Query: 133 I 133
           +
Sbjct: 474 V 474


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 185/381 (48%), Gaps = 7/381 (1%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N L+  L +       LS+   +   G  PD+ TY+IL+   CK       
Sbjct: 162 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 221

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   +      PN VT+  L+ G+C E  + +A  L   L + GC+P+ + YNT++ G
Sbjct: 222 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 281

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC       A  L  EM   N        PN  T++++I  LC++G + +A +L  +M  
Sbjct: 282 LCSAERWGDADELVTEMLREN------CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 335

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
                N+VTY ++I+G C   + + A GLL +M   G +P++V+ N ++  LC   +  +
Sbjct: 336 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVD 395

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+D M Q    P+  T+NTL+   C  G +    E+F  M   GC  +  +Y+ +I+
Sbjct: 396 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 455

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G  K  ++++AL L+NE+  KG  P  + Y  L   L +    E A++   ++Q + ++ 
Sbjct: 456 GLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISP 514

Query: 366 DTCTYRTFIDGLCVRPQVRFT 386
            T  Y   + GLC   +  F 
Sbjct: 515 HTVLYNAILLGLCRNGKTEFA 535



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL    K + Y   + L   + + G  P+  TY++L++  C  G V     +
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V + +++KGLC+  R  +A  L T++    C PN  T+N +I  LCR
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L ++M+            N VTY+ II+GLC++  VD A  L  +MK    
Sbjct: 320 KGLLQQAIQLLEKMSKHG------CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +L+ G C A  W +A+ L+  M   G  P+ V+ N ++  LC+ G M +A  
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M      PN+ TY+T++ G     K+++  ELF  M   G   D   Y +L     
Sbjct: 434 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLN 492

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  +EEA+    +L   GI P  V YN +  GL    + E A+ +   M  +    D  
Sbjct: 493 DDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 552

Query: 369 TYRTFIDGL 377
           TY   I+GL
Sbjct: 553 TYVILIEGL 561



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 177/372 (47%), Gaps = 12/372 (3%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P PP  +  N L+  L +    D      + + + G    +  Y  L + +C+ G++   
Sbjct: 98  PRPPDAALANRLVRDLCRRGRPDDA---ERVVGACGPAATVVAYGALTDGYCRAGRLGDA 154

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             + G +      PN  T+  LI  LC   ++ +A ++   +   GC P+V+TYN L+  
Sbjct: 155 RRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEA 211

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+      A+ L  ++    G       PN VTY++++DG+C EG VD A EL   +  
Sbjct: 212 TCKGRGYRQAMELI-DLMRAEG-----CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS 265

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P+ V Y +++ G C A  W +A  L+ EM+ +   PN  + NV++  LC+ G +  
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 325

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +LL+ M +     N  TYN +++G C    ++    L   M+S GCK D  +YN L+ 
Sbjct: 326 AIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK 385

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G C   +  +A  L + +   G  P  VT+NTL   L +      A+++F +M       
Sbjct: 386 GLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 445

Query: 366 DTCTYRTFIDGL 377
           ++ TY T I GL
Sbjct: 446 NSITYSTIISGL 457



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 175/380 (46%), Gaps = 17/380 (4%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R    +P  +   +  L  L      D  L L +   S    PD    + L+   C+ G+
Sbjct: 62  RQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVE---SSPRPPDAALANRLVRDLCRRGR 118

Query: 62  VSLGFVIFGRILRSCF-APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
                    R++ +C  A  VV + +L  G C   R+ +A  +   +     +PN  TYN
Sbjct: 119 PDDAE----RVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV---QPNAYTYN 171

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+ LC  G    AL++  +M      +     P+ VTY+I+++  CK     +A EL 
Sbjct: 172 PLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILLEATCKGRGYRQAMELI 225

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M+ E   PN VTY  L+ G C   D ++A  LL  +   G +P+ V+ N ++  LC  
Sbjct: 226 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            +  +A  L+  M++ +  PN  T+N ++   C  G + +  +L   M   GC  +  +Y
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N +ING C+ + V+ A+ L +++   G KP +VTYNTL  GL    Q   A +L   M  
Sbjct: 346 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405

Query: 361 NDVAADTCTYRTFIDGLCVR 380
           N    D  T+ T I  LC +
Sbjct: 406 NGCLPDNVTFNTLIGFLCQK 425



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 157/319 (49%), Gaps = 7/319 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   ++N +L  L   + +     L   +      P+  T++++I   C+ G +  
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 325

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++ +     N+VT+ ++I GLC +  +  A  L +K+K++GC+P+++TYNTL+ 
Sbjct: 326 AIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK 385

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC     + A  L   MT  NG +     P+ VT++ +I  LC++G +  A E+F QM 
Sbjct: 386 GLCSAAQWVDAEELMDNMTQ-NGCL-----PDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +   PN +TY+++I G   A   ++A  L  EM  +G  P+ +   ++   L  +  ++
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIE 498

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A + +  +    + P+   YN ++ G C  GK     ++   M S GC  DD +Y ILI
Sbjct: 499 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 558

Query: 305 NGYCKNKEVEEALSLYNEL 323
            G      + EA  L  +L
Sbjct: 559 EGLAYEGYLNEARELLIKL 577



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 12/304 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P+      L++ LC   R  +A  +   + A G    V+ Y  L +G CR G    A  +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
                      G+  +PN  TY+ +I  LC+ G V  A  +   M      P+VVTY  L
Sbjct: 158 VG---------GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNIL 208

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +   C    + +A  L+  M  +G  PN V+ NV+M+ +C  G +D+A  LL  +     
Sbjct: 209 LEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGC 268

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           +P+   YNT++ G C   +     EL   M    C  ++ ++N++I   C+   +++A+ 
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 328

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  ++   G    +VTYN + +GL E R  + A+ L  +M+      D  TY T + GLC
Sbjct: 329 LLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLC 388

Query: 379 VRPQ 382
              Q
Sbjct: 389 SAAQ 392



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 37/258 (14%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N ++  L + ++ D  + L  ++ S G  PD+ TY+ L+   C   Q      +  
Sbjct: 342 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMD 401

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + ++   P+ VTF +LI  LC +  +V+A  +F ++   GC PN ITY+T+I+GL +  
Sbjct: 402 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461

Query: 131 HTIVALNLFKEMTNGNGEIGVVFK----------------------------PNTVTYSI 162
               AL LF EM +       +++                            P+TV Y+ 
Sbjct: 462 KLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I+ GLC+ G  + A ++   M      P+ +TY  LI G  +    NEA+ LLI++    
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL---- 577

Query: 223 VQPNVVSSNVIMNELCKN 240
                 S +V++N L K+
Sbjct: 578 -----CSRDVLVNSLIKS 590


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S  +LL  L K K +   +++F  +      P  + Y   I    K+  V  G  +
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+     +P V  +  LI GLC   ++ +A  LF ++ A    P++ITYNTLI+G C+
Sbjct: 575 FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   +  + + M   N E      P+ +T++ ++ GL K G V+ A+ +  +MK +  
Sbjct: 635 DGNPEKSFKVRERMKADNIE------PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGF 688

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T++ L  G+   +  + A G+    VD G++ N  + ++++N LCK G+++ A  
Sbjct: 689 VPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEE 748

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L   +   + PN   YNT++DG+   G +   +    +ME  G K D  +YN LI  +C
Sbjct: 749 ILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFC 808

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  ++E A    N++  KG+ P+V TYN L  G     + ++   L  EM+ N    +  
Sbjct: 809 ELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVV 868

Query: 369 TYRTFIDGLC 378
           +Y T I+ LC
Sbjct: 869 SYGTLINCLC 878



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 178/354 (50%), Gaps = 15/354 (4%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +F+IL    + N   D  L +++     GL  + YT SIL+N  CK GQ+     I
Sbjct: 690  PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             GR +     PN V + ++I G   +  +V A      ++  G +P+ + YN LI   C 
Sbjct: 750  LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809

Query: 129  TGHTIVALNLFKEMTNGNGEIGVV----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
             G          +M N   E+  +      P+  TY+I+I G  ++   DK  +L  +M+
Sbjct: 810  LG----------DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 185  YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                 PNVV+Y +LI+  C  +   EA+ +  +M D+GV PNV   N++++  C  GK++
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 245  NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            +A R  + M +  +  N  TYNTL+DG  + GK+   +++ + +   G K D F+YN LI
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 305  NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            +GY     V+  ++LY E+   GIKPT+ TY+ L   L      E   K+F EM
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM 1032



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 179/378 (47%), Gaps = 7/378 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + +FN LL  L K    +   ++   +   G  PD +T+SIL + +    +      +
Sbjct: 655  PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +   + S    N  T + L+  LC E +I +A  +  +  A G  PN + YNT+I+G  R
Sbjct: 715  YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G  + A      M           KP+ + Y+ +I   C+ G ++ A++   +MK + +
Sbjct: 775  KGDLVGARMKIDAMEKQG------MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +P+V TY  LI G+    ++++   LL EM D G  PNVVS   ++N LCK  K+  A  
Sbjct: 829  SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +   M    V PN   YN L+DG C  GKI         M   G + +  +YN LI+G  
Sbjct: 889  VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             N ++ EA  +  E+  KG+KP V TYN+L  G       +R + L+ EM+ + +     
Sbjct: 949  MNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLK 1008

Query: 369  TYRTFIDGLCVRPQVRFT 386
            TY   I  LC +  +  T
Sbjct: 1009 TYHLLI-SLCTKEGIELT 1025



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 182/377 (48%), Gaps = 16/377 (4%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++NIL+G   +   +D    L K +   G  P++ +Y  LINC CK  ++    ++
Sbjct: 830  PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 889

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +     +PNV  +  LI G C++ +I +A     ++   G E N++TYNTLI+GL  
Sbjct: 890  KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM 949

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A ++  E++          KP+  TY+ +I G    G V +   L+ +MK   +
Sbjct: 950  NGKLAEAEDMLLEISRKG------LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGI 1003

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P + TY  LI   C        K +  EM    +QP+++  N +++    +G MD A  
Sbjct: 1004 KPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFN 1059

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L   M++  +  +  TYN+L+ G    GK+  V+ L   M++   + +  +Y+I++ G+C
Sbjct: 1060 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHC 1119

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN---DVAA 365
            + K+   A   Y E+  KG+   V   + L  GL E  +++ A  +  EM G    DV  
Sbjct: 1120 EMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIV 1179

Query: 366  D---TCTYRTFIDGLCV 379
            D   + T R+F +  CV
Sbjct: 1180 DEDLSATERSFENQECV 1196



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)

Query: 87  LIKGLCAESRIV-EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           L+  L  ES+++ EAA LF  L+  G  P+  +   L++ L +T    V +N+F  +   
Sbjct: 487 LLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 546

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
           +      F+P+   Y   I    K   V K  ELF +MK++ ++P V  Y          
Sbjct: 547 D------FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIY---------- 590

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
                                    NV+++ LCK  +M +A +L D M+   + P+  TY
Sbjct: 591 -------------------------NVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITY 625

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           NTL+DG+C  G   +  ++   M++   +    ++N L+ G  K   VE+A ++  E+  
Sbjct: 626 NTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKD 685

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G  P   T++ LF G     +A+ AL ++     + +  +  T    ++ LC   Q+ 
Sbjct: 686 QGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G++ +
Sbjct: 87  HKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRV 146

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + + A G EP+V TY+ LIN
Sbjct: 147 ARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLIN 206

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 207 GLCKESKIDGANELFDEMLDK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 260

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+ +++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 261 SQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLE 320

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y TL+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 321 TAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 380

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 381 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 105 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVV 164

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 165 SFNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VEPDVYTYSVLINGLCKESKIDGAN 218

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q +  ++++ N ++  L
Sbjct: 219 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 278

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 279 CKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 338

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +        KL  E
Sbjct: 339 VVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 398

Query: 358 MQ 359
           MQ
Sbjct: 399 MQ 400



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 131 FNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 190

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV+P+V + +V++N LCK  K+D A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 191 ASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 250

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A +L +E+  KG+KP  +TY TL 
Sbjct: 251 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLI 310

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y T I GLC
Sbjct: 311 DGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLC 349



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 6/342 (1%)

Query: 42  LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA 101
           L  D+Y +S LI  + + G +      +       F     T   +++ L          
Sbjct: 54  LRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVW 113

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
             + ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+++
Sbjct: 114 GFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWG------LRPSVVSFN 167

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +++G  + G +D+   L   M    + P+V TY+ LI+G C  +  + A  L  EM+D+
Sbjct: 168 TLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDK 227

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ PN V+   +++  CKNG++D A  +   M+   +  +  TYNTL+ G C  G + + 
Sbjct: 228 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQA 287

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           + L   M   G K D  +Y  LI+G CK  ++E A      +  + I+   V Y TL  G
Sbjct: 288 QNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISG 347

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +  ++  A K+  EM    +  DT TY   I+  C +  V
Sbjct: 348 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 389



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 121/229 (52%), Gaps = 10/229 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 248

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L    + +++T+ +LI GLC +  + +A  L  +++  G +P+ ITY T
Sbjct: 249 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTT 308

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 309 LIDGCCKEGDLETAFEHRKRMIQEN------IRLDDVVYTTLISGLCQEGRSVDAEKMLR 362

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D W  +K LL EM   G  P+VV+
Sbjct: 363 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSK-LLKEMQRDGHVPSVVT 410



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 134 LMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 193

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ +TY+ L++G C   KI+   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 194 VEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 253

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + +   ++TYNTL +GL +    ++A  L  EM+   +  D  TY T IDG 
Sbjct: 254 EIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGC 313

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 314 CKEGDLETAFEHRK 327



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 7   SYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLIT 66

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 67  AYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPA 126

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G++  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 127 SLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 186

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++ A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 187 SAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKN 246

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++AD  TY T I GLC +  ++
Sbjct: 247 GRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLK 285


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           ++ GCLA+ K       L++ + S G  PD++TY+IL++  CK+G+      +   +   
Sbjct: 322 VIRGCLAEGK-LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK 380

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
             APN+VT+++L+   C      +A A+  ++ A G   N   YN +I  L + G    A
Sbjct: 381 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEA 440

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           + L +EM +         KP+  TY+ II  LC    +D+A+ +F  +  E +  N +TY
Sbjct: 441 MRLVQEMKSQG------CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LIH   H+  W E   L  EMV  G   +VVS N ++  LCK G +D +  LL+ M+ 
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             ++PN F+YN L++  C  GK+    EL   M + G   D  +YN LING CK      
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 614

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           AL+L  +LP + + P +VTYN L     ++R  + A  L  +     +  +  T+   + 
Sbjct: 615 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674

Query: 376 GLCVRP 381
               +P
Sbjct: 675 NFVRQP 680



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 192/441 (43%), Gaps = 63/441 (14%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +F +    L +       L+L + +   G  PD   Y  +I+     G V+    
Sbjct: 177 PPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAT 236

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L    A +V TF  ++ GLC    + EAA L  ++   GC P+V+TY  L+ GLC
Sbjct: 237 LLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC 296

Query: 128 RTGHT--------------IVALNLFKEMTNGNGEIGVVFK-----------PNTVTYSI 162
           RT                 +V LN         G++    +           P+  TY+I
Sbjct: 297 RTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNI 356

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL------- 215
           ++ GLCK G    A  +  +M+ +   PN+VTY++L+H FC    W++A+ +L       
Sbjct: 357 LMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG 416

Query: 216 ----------------------------IEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
                                        EM  QG +P++ + N I+  LC N +MD A 
Sbjct: 417 FSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAE 476

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +   +++  V  N  TYNTL+     +G+      L   M   GC  D  SYN LI   
Sbjct: 477 HIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   V+ ++ L  E+  KGIKP   +YN L + L +  +   AL+L  EM    +  D 
Sbjct: 537 CKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 596

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TY T I+GLC   +V +T+A
Sbjct: 597 VTYNTLINGLC---KVGWTHA 614



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L  N   D    +F  L   G+  +  TY+ LI+     G+   G  +
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRL 513

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++      +VV++  LIK LC E  +  +  L  ++   G +PN  +YN LIN LC+
Sbjct: 514 ANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCK 573

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L KEM N          P+ VTY+ +I+GLCK G+   A  L  ++  EN+
Sbjct: 574 AGKVRDALELSKEMLNQG------LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           +P++VTY  LI   C     ++A  LL + V  G+ PN
Sbjct: 628 HPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPN 665



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L  +  +   L L   +   G   D+ +Y+ LI   CK G V    ++   +
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN  ++  LI  LC   ++ +A  L  ++   G  P+++TYNTLINGLC+ G T
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             ALNL +++ N N        P+ VTY+I+I   CK   +D A  L  +     + PN 
Sbjct: 613 HAALNLLEKLPNEN------VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE 666

Query: 193 VTYTSLIHGF 202
            T+  ++  F
Sbjct: 667 RTWGMMVQNF 676



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           +H  P  V S+N L+  L K  + D  + L + + + G+ P+ ++Y++LIN  CK G+V 
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +   +L     P++VT+ +LI GLC       A  L  KL      P+++TYN LI
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           +  C+      A  L  +  +G    G+V  PN  T+ +++    ++
Sbjct: 639 SWHCKVRLLDDASMLLDKAVSG----GIV--PNERTWGMMVQNFVRQ 679



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 1/182 (0%)

Query: 175 KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +A  L  QM     + P+  +Y +++     A+   +A  L   M+   V P   +  V 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
              LC+ G+  +A  LL  M +    P+A  Y T++      G +     L   M  MGC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D  ++N ++ G C    V EA  L + +   G  P+VVTY  L  GL   RQA+ A  
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 354 LF 355
           + 
Sbjct: 307 ML 308



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 5/181 (2%)

Query: 213 GLLIEMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           G  + ++DQ      V P+  S N +++ L +     +A  L   M++  V P  FT+  
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
                C  G+      L   M   GC  D   Y  +I+       V EA +L +E+   G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
               V T+N +  GL  +     A +L   M  +       TY   + GLC   Q    Y
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 388 A 388
           A
Sbjct: 306 A 306


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 197/434 (45%), Gaps = 76/434 (17%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+  L KN      + +   + +IG+  D  TY  L+  FC+M ++ +   I   ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R  F P+    + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LFKEM  G G      +PN VTY+I+I  LCK G ++ A  LF +M+ + +   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------------ 241
            Y SLI+G+C     + A+GLL  MV +G+ P   S + ++  LC+NG            
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 242 -----------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                  KMD A+RL D M+  +V PN  T+N +++G+CL G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA---------------------- 316
            +  +L+  M  MG K D+++Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 317 -------------LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
                          L++E+  +G+K  +V++  + +   +    E++  LF EM+   V
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 364 AADTCTYRTFIDGL 377
             D   Y   ID L
Sbjct: 650 KPDDIFYTCMIDAL 663



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 33/398 (8%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +L  L K + +     LF ++   G+  D Y Y+  I  +C+   +     +  R+    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
              + V +  L+ GLC   R+ EA  +   +   G   + +TY TL+ G CR     +AL
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 137 NLFKEM-------TNGN------------------------GEIGVVFKPNTVTYSIIID 165
            +  +M       +  N                        G++G+V  PN   Y+ +ID
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV--PNVFAYNALID 346

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
            LCK    D A  LF +M    L PN VTY  LIH  C      +A  L  +M D+G++ 
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
            V   N ++N  CK G +D A  LL  MV+  + P A +Y+ L+ G C  G ++   EL 
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G   +++++  LING+CK+K+++EA  L++++    + P  VT+N +  G   +
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +A +L+ +M    +  D  TYR+ I GLC+   V
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S++ L+  L +N    + + L + +   G+  + YT++ LIN FCK  ++     +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF  +I+G C    I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 129 TGHTIVALNLFKEMTNGNG----------------------------EIGVV-FKPNTVT 159
           T     A     ++ N                               E+ V   K + V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++II+    K+   +K+  LF +MK + + P+ + YT +I       +  +A     +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  PN V+  V++N LCK+G + +A  L   M+  +V PN FTYN  +D F   G + 
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K+L  +M   G      S+NILI G CK  +++EA+ L +++   G  P  ++Y+T+ 
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           H L ++    +A +L+ EM    +  D   Y  FI
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 178/375 (47%), Gaps = 29/375 (7%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S G+  + YT S ++    K+ Q +L   +F ++L+S    +   +T+ I+  C    + 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-------------- 144
            A  L  ++++ G + + + YN L+ GLC+      A+ +   M N              
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 145 ---------------GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                           +  I + F P+    S +ID L K+  V++A  L  ++    + 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV  Y +LI   C    +++A  L  EM  +G++PN V+  ++++ LCK G +++A  L
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D M    ++   + YN+L++G+C  G ++R + L   M   G      SY+ LI G C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N ++   + L+ E+  +GI     T+  L +G  + ++ + A +LF +M  ++V  +  T
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 370 YRTFIDGLCVRPQVR 384
           +   I+G C+   +R
Sbjct: 516 FNVMIEGYCLVGNIR 530



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF I++    K    +    LF+ +   G+ PD   Y+ +I+   K   +      + ++
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   ++PN VT T LI  LC    +  A  L  ++ A    PN  TYN  ++     G  
Sbjct: 680 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L   M  G+         + V+++I+I GLCK G + +A +L  ++     +P+ 
Sbjct: 740 EKAKDLHSAMLQGH-------LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 792

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           ++Y+++IH  C   D N+A  L  EM+ +G++P+VV+ N+ +     +G+ D A  +   
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852

Query: 253 MVQCDVRPNAFTYNTLMDGFCL 274
           M++  V+PN  TY  L+ G  L
Sbjct: 853 MIRSGVQPNWDTYRALLSGISL 874



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%)

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G+  N  +++ I+  L K  +   A  L D M+Q  V  + + Y   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +  + L V MES G K     YN+L+ G CKN  V+EA+ + N +   G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 339 FHGLFEIRQAERALKLFVEM 358
            +G   + + E AL++  +M
Sbjct: 275 VYGFCRMEELEMALRITHDM 294



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%)

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L L +   +  N +T + ++       +    ++LF  M   G   D++ Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +++ ++ A  L   +  +G+K + V YN L +GL +  + + A+++   M    V AD  
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 369 TYRTFIDGLC 378
           TYRT + G C
Sbjct: 270 TYRTLVYGFC 279


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 192/362 (53%), Gaps = 9/362 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  +  +G   + Y+Y+ILI   C+   V    V+F  + R   +PNV  FT LI GLC
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R+ +A  LF  +   G  P+V+TYN +I G  + G    AL + KE+   NG     
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 353

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+  TY+ +I GLC +   ++A+EL      E   P VVT+T+LI+G+C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  +M+    + ++     ++N L K  ++  A  LL+ +    + PN  TY +++DG+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +GK++   E+   ME  GC+ + ++YN L+ G  K+K++ +A++L  ++   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARR 390
           +TY TL  G  +    + A +LF  M+ N +  D   Y    D LC   R +  +++  R
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 391 KG 392
           KG
Sbjct: 593 KG 594



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 187/385 (48%), Gaps = 12/385 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F  L+  L K         L   +++ GL P++ TY+ +I+ +CK G+V +   +   + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    PN  T+ SL+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C      
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF EM   NG      KP+   Y+++ D LCK G   +A+E +  +  + +    V
Sbjct: 550 NAFRLF-EMMEQNG-----LKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKV 600

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT+LI GF  A + + A  L+  M+D+G  P+  + +V+++ LCK  +++ A  +LD M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               ++   F Y  L+D     GK +  K ++  M S G K    +Y + IN YCK   +
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  L  ++  +G+ P VVTYN L  G   +   +RA      M G     +  TY   
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 374 IDGLCVRPQVRFTYARRKGNSGNTN 398
           +  L    +    Y R    SG  N
Sbjct: 781 LKHLL---KGNLAYVRSVDTSGMWN 802



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 194/439 (44%), Gaps = 78/439 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+  L K+        LF  +   G+ P + TY+ +I  + K+G+++     
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 67  ------------------VIFG--------------RILRSCFAPNVVTFTSLIKGLC-- 92
                             +I+G                ++  F P VVTFT+LI G C  
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 93  ---------------------------------AESRIVEAAALFTKLKAFGCEPNVITY 119
                                             + R+ EA  L  ++ A G  PNVITY
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            ++I+G C++G   +AL + K M     +      PN  TY+ ++ GL K+  + KA  L
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQ------PNAWTYNSLMYGLVKDKKLHKAMAL 519

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+ + + PNV+TYT+L+ G C  +D++ A  L   M   G++P+  +  V+ + LCK
Sbjct: 520 LTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK 579

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G+ + A      +V+  V      Y TL+DGF   G  +    L   M   GC  D ++
Sbjct: 580 AGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 636

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y++L++  CK K + EAL + +++  +GIK T+  Y  L   +    + + A +++ EM 
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 360 GNDVAADTCTYRTFIDGLC 378
            +       TY  FI+  C
Sbjct: 697 SSGHKPSATTYTVFINSYC 715



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 182/406 (44%), Gaps = 45/406 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L + K     L LF  +   G  P++  ++ LI+  CK G+V    ++F  +
Sbjct: 255 SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++   P+V+T+ ++I G     R+ +A  +   ++  GC P+  TYNTLI GLC    T
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 373

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC------------------------ 168
             A  L       N  +   F P  VT++ +I+G C                        
Sbjct: 374 EEAEELL------NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 169 -----------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                      K+  + +AKEL  ++    L PNV+TYTS+I G+C +   + A  +L  
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M   G QPN  + N +M  L K+ K+  A  LL  M +  + PN  TY TL+ G C    
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    LF  ME  G K D+ +Y +L +  CK    EEA   Y+ +  KG+  T V Y T
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 604

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L  G  +    + A  L   M       D+ TY   +  LC + ++
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 177/417 (42%), Gaps = 54/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V ++  LL        +D    LF+ +   GL PD + Y++L +  CK G+    +  
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 67  ------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
                                          +  R++     P+  T++ L+  LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA  +  ++   G +  +  Y  LI+ + R G    A  ++ EMT+         KP+
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG------HKPS 703

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY++ I+  CKEG ++ A++L L+M+ E + P+VVTY  LI G  H    + A   L 
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNG----------------KMDNASRLLDLMVQCDVRP 260
            MV    +PN  +  +++  L K                  ++D   +LL+ MV+  + P
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              TY++L+ GFC  G++     L   M   G   ++  Y +LI   C  K  E+ALS  
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + +   G +P + +Y  L  GL      E+   LF ++       D   ++   DGL
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           ++++L   G  P+ +TYNT+I   C+ G    A   F+ +  G        +P T T + 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGG------LEPETFTCNA 223

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G C+ G + KA  LFL M       N  +YT LI G C A    EA  L + M   G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN--- 279
             PNV +   +++ LCK+G++ +A  L D M Q  V P+  TYN ++ G+   G++N   
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           ++KEL   ME  GC  DD++YN LI G C  K  EEA  L N    +G  PTVVT+  L 
Sbjct: 344 KIKEL---MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLI 399

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G     + + AL++  +M  +    D   +   I+ L  + +++
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 22/322 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++LL  L K K  +  L +  +++  G+   ++ Y+ILI+   + G+      +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  S   P+  T+T  I   C E R+ +A  L  K++  G  P+V+TYN LI+G   
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
            G+   A +  K M      +G   +PN  TY +++  L K                   
Sbjct: 752 MGYIDRAFSTLKRM------VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D   +L  +M    LNP V TY+SLI GFC A    EA  LL  M  +G+ PN     +
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++   C     + A   + +M +C  +P   +Y  L+ G C  G   +VK LF  +  +G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 293 CKHDDFSYNILINGYCKNKEVE 314
             HD+ ++ IL +G  K   V+
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVD 947



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 108/219 (49%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+  +  L +    +    ++ Q+  + L P+ VTY ++I  +C   D   A      ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G++P   + N ++   C+ G++  A  L  +M     + N ++Y  L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF+ M+  GC  +  ++  LI+G CK+  V +A  L++ +P  G+ P+V+TYN + 
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  ++ +   ALK+   M+ N    D  TY T I GLC
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 184/394 (46%), Gaps = 19/394 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP    + I+L  L + K  D V  L   +   G  PD  T + L++ FCK+GQ+   F 
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +     +  +   +  ++SLI GL    R  E      K+   G EP+V+ Y  LI G C
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    ALN+  +MT           P+T  Y+ +I G C  G +DKA+ L L++   +
Sbjct: 353 EVGMVDYALNMLNDMTQRG------LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P   TYT LI G C     +EA+ +  +M + G  P++++ N +++ LCK G+++ A 
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 248 RL-------------LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
            L             L L    D   +  +  T+++  C +G I +  +L + +   G  
Sbjct: 467 HLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVV 526

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D  +YN+LING+CK K +  A  L+ EL  KG  P  VTY TL  G   + + E A ++
Sbjct: 527 PDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRV 586

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             +M  N     +  Y+  +   C + ++   ++
Sbjct: 587 LDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS 620



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 192/384 (50%), Gaps = 21/384 (5%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PPP  +F++L+   AK+   +  +  F ++   G  PD++TY+ +++   +     L   
Sbjct: 130 PPP--TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALA 187

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ ++L+  + PN  TF  L+ GLC   +  +A  +F ++   G  PN + Y  +++GLC
Sbjct: 188 VYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +   T     L   M            P+++T + ++DG CK G +D+A  L    + E 
Sbjct: 248 QAKRTDDVHRLLNTMKVSGC------CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
               +  Y+SLI G   A  ++E +    +M   G++P+VV   +++   C+ G +D A 
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+ M Q  + P+ + YN L+ GFC  G +++ + L + +    C     +Y ILI G 
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--------- 358
           C+N  ++EA  ++N++   G  P+++T+N L  GL +  + E A  LF +M         
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLF 481

Query: 359 ----QGNDVAADTCTYRTFIDGLC 378
               QG D   DT + +T ++ LC
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLC 505



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 10/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + IL+    +    D  L++   +   GL PD Y Y+ LI  FC +G +     +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I ++   P   T+T LI G+C    + EA  +F +++  GC P+++T+N LI+GLC+
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 129 TGHTIVALNLFKEMTNGNG-------EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
            G    A +LF +M  G           G     +T +   +++ LC+ G + KA +L +
Sbjct: 459 AGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLM 518

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           Q+    + P+++TY  LI+GFC A + N A  L  E+  +G  P+ V+   +++   +  
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS-MESMGCKHDDFSY 300
           + ++A R+LD MV+    P++  Y  LM   C  GK++    L++  + S+  + D+   
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK 638

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             L   + +  E+E+A+    E+ FK     +  Y     GL + R++E ALK+F+ ++ 
Sbjct: 639 --LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE 696

Query: 361 NDVAADTCTYRTFIDGLC 378
             +  +  +    I+GLC
Sbjct: 697 CQMDVNPPSCVMLINGLC 714



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 9/270 (3%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L  +L   G+ PD+ TY++LIN FCK   ++  F +F  +     +P+ VT+ +LI G  
Sbjct: 516 LLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFH 575

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF-KEMTNGNGEIGV 151
              R  +A  +  ++   GC P+   Y  L+   CR G   VA +L+ K + +   +   
Sbjct: 576 RVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDE 635

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             K        + +   ++G ++KA    L+M ++  N  +  YT  + G C A    EA
Sbjct: 636 TLK--------LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEA 687

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             + + + +  +  N  S  +++N LCK+G ++ A  +    ++          N L+  
Sbjct: 688 LKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRS 747

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             L  K+    +L   M S G   D++ ++
Sbjct: 748 LILQDKMKHALDLLNRMNSAGYDLDEYLHH 777



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 102/220 (46%)

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VT++++ID L K+   D   ++  ++K  N+     T++ LI  +  +    +A     +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M D G +P+V + N I++ + +      A  + + M++ +  PN  T+  L++G C  GK
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +   ++F  M   G   +   Y I+++G C+ K  ++   L N +   G  P  +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L  G  ++ Q + A  L    +          Y + IDGL
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 35/196 (17%)

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+ N++++ L K+   D   ++L+ +   +++    T++ L+  +  +G   +  E F  
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 288 MESMGCKHDDFSYN-----------------------------------ILINGYCKNKE 312
           M+  GCK D F+YN                                   IL+NG CKN +
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++AL +++E+  KGI P  + Y  +  GL + ++ +   +L   M+ +    D+ T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 373 FIDGLCVRPQVRFTYA 388
            +DG C   Q+   +A
Sbjct: 277 LLDGFCKLGQIDEAFA 292



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 15/249 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+L+    K K+ +    LF+ L   G  PD  TY  LI+ F ++ +    F +
Sbjct: 527 PDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRV 586

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLC 127
             +++++   P+   +  L+   C + ++  A +L+ K L++   + +      L     
Sbjct: 587 LDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL--KLAEEHF 644

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNT---VTYSIIIDGLCKEGFVDKAKELFLQMK 184
             G    A+    EM          FK N      Y+I + GLC+    ++A ++FL +K
Sbjct: 645 EKGELEKAVRCLLEMN---------FKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK 695

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              ++ N  +   LI+G C   +   A  + +  +++G        N ++  L    KM 
Sbjct: 696 ECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMK 755

Query: 245 NASRLLDLM 253
           +A  LL+ M
Sbjct: 756 HALDLLNRM 764


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 197/434 (45%), Gaps = 76/434 (17%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+  L KN      + +   + +IG+  D  TY  L+  FC+M ++ +   I   ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R  F P+    + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LFKEM  G G      +PN VTY+I+I  LCK G ++ A  LF +M+ + +   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------------ 241
            Y SLI+G+C     + A+GLL  MV +G+ P   S + ++  LC+NG            
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 242 -----------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                  KMD A+RL D M+  +V PN  T+N +++G+CL G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA---------------------- 316
            +  +L+  M  MG K D+++Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 317 -------------LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
                          L++E+  +G+K  +V++  + +   +    E++  LF EM+   V
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 364 AADTCTYRTFIDGL 377
             D   Y   ID L
Sbjct: 650 KPDDIFYTCMIDAL 663



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 33/398 (8%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +L  L K + +     LF ++   G+  D Y Y+  I  +C+   +     +  R+    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
              + V +  L+ GLC   R+ EA  +   +   G   + +TY TL+ G CR     +AL
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 137 NLFKEM-------TNGN------------------------GEIGVVFKPNTVTYSIIID 165
            +  +M       +  N                        G++G+V  PN   Y+ +ID
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV--PNVFAYNALID 346

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
            LCK    D A  LF +M    L PN VTY  LIH  C      +A  L  +M D+G++ 
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
            V   N ++N  CK G +D A  LL  MV+  + P A +Y+ L+ G C  G ++   EL 
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G   +++++  LING+CK+K+++EA  L++++    + P  VT+N +  G   +
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +A +L+ +M    +  D  TYR+ I GLC+   V
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S++ L+  L +N    + + L + +   G+  + YT++ LIN FCK  ++     +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF  +I+G C    I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 129 TGHTIVALNLFKEMTNGNG----------------------------EIGVV-FKPNTVT 159
           T     A     ++ N                               E+ V   K + V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++II+    K+   +K+  LF +MK + + P+ + YT +I       +  +A     +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  PN V+  V++N LCK+G + +A  L   M+  +V PN FTYN  +D F   G + 
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K+L  +M   G      S+NILI G CK  +++EA+ L +++   G  P  ++Y+T+ 
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           H L ++    +A +L+ EM    +  D   Y  FI
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 178/375 (47%), Gaps = 29/375 (7%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S G+  + YT S ++    K+ Q +L   +F ++L+S    +   +T+ I+  C    + 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-------------- 144
            A  L  ++++ G + + + YN L+ GLC+      A+ +   M N              
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 145 ---------------GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                           +  I + F P+    S +ID L K+  V++A  L  ++    + 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV  Y +LI   C    +++A  L  EM  +G++PN V+  ++++ LCK G +++A  L
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D M    ++   + YN+L++G+C  G ++R + L   M   G      SY+ LI G C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N ++   + L+ E+  +GI     T+  L +G  + ++ + A +LF +M  ++V  +  T
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 370 YRTFIDGLCVRPQVR 384
           +   I+G C+   +R
Sbjct: 516 FNVMIEGYCLVGNIR 530



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF I++    K    +    LF+ +   G+ PD   Y+ +I+   K   +      + ++
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   ++PN VT T LI  LC    +  A  L  ++ A    PN  TYN  ++     G  
Sbjct: 680 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L   M  G+         + V+++I+I GLCK G + +A +L  ++     +P+ 
Sbjct: 740 EKAKDLHSAMLQGH-------LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 792

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           ++Y+++IH  C   D N+A  L  EM+ +G++P+VV+ N+ +     +G+ D A  +   
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852

Query: 253 MVQCDVRPNAFTYNTLMDGFCL 274
           M++  V+PN  TY  L+ G  L
Sbjct: 853 MIRSGVQPNWDTYRALLSGISL 874



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%)

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G+  N  +++ I+  L K  +   A  L D M+Q  V  + + Y   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +  + L V MES G K     YN+L+ G CKN  V+EA+ + N +   G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 339 FHGLFEIRQAERALKLFVEM 358
            +G   + + E AL++  +M
Sbjct: 275 VYGFCRMEELEMALRITHDM 294



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%)

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L L +   +  N +T + ++       +    ++LF  M   G   D++ Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +++ ++ A  L   +  +G+K + V YN L +GL +  + + A+++   M    V AD  
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 369 TYRTFIDGLC 378
           TYRT + G C
Sbjct: 270 TYRTLVYGFC 279


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 32/391 (8%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   + N +L  LA+++    V  LF++L +    P+++T++I+I+  CK G+++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+      P+VVTF SLI G      + E   L  +++  GC+ +V+TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A   F  M       GV+   N VT+S  +D  CKEG V +A +LF QM+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           +  N  TYT LI G C A   ++A  LL EMV QGV  NVV+  V+++ LCK  K+  A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L +M +  VR N   Y TL+ G  +     +   L   M++ G + D   Y  LI G 
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL--------------- 352
           C   +++EA SL  ++   G++P  + Y T+    F+  +   A+               
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNN 503

Query: 353 -------KLFVEMQGNDVAADTCTYRTFIDG 376
                  +LF EM    ++ D   Y   +DG
Sbjct: 504 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 186/398 (46%), Gaps = 31/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D V  L + +   G   D+ TY+ LINCFCK G++   +  
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + R     NVVTF++ +   C E  + EA  LF +++  G   N  TY  LI+G C+
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  EM       GV    N VTY++++DGLCKE  V +A+++   M+   +
Sbjct: 341 AGRLDDAIVLLDEMVRQ----GVPL--NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N + YT+LIHG     +  +A GLL EM ++G++ ++     ++  LC   K+D A  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKI----------------------NRVKELFV 286
           LL  M +  + PN   Y T+MD    +GK+                      N   +LF 
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFN 514

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M   G   D   Y  L++GY K   + +A +L  ++   G++  +  Y     G   + 
Sbjct: 515 EMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLN 574

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
               A ++F EM G+ +A D   Y   I  +   P++R
Sbjct: 575 MMPEAREVFSEMIGHGIAPDRAVYNCLITQI---PEIR 609



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           LF +L A    PNV T+N +I+ LC+ G    A +LF  M     E+G +  P+ VT++ 
Sbjct: 179 LFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMK----EMGCL--PDVVTFNS 228

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +IDG  K G +D+ ++L  +M+      +VVTY +LI+ FC       A G    M  +G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V  NVV+ +  ++  CK G +  A +L   M    +  N FTY  L+DG C  G+++   
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M   G   +  +Y +L++G CK ++V EA  +   +   G++   + Y TL HG 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           F  + +E+AL L  EM+   +  D   Y   I GLC
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLC 444



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 17/305 (5%)

Query: 74  RSCFAPNVVTFTSLI--KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           RS  A  V T  S++  +GL  ++  V A A   +L+     PN  T N ++  L R   
Sbjct: 118 RSALASVVDTLLSVLADRGLLDDA--VRAVARVRELRV---PPNTRTCNHILLRLARDRS 172

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
             +   LF+++            PN  T++I+ID LCKEG + +A+ LF +MK     P+
Sbjct: 173 GRLVRRLFEQLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           VVT+ SLI G+    + +E + L+ EM   G + +VV+ N ++N  CK G+M+ A     
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M +  V  N  T++T +D FC  G +    +LF  M   G   ++F+Y  LI+G CK  
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +++A+ L +E+  +G+   VVTY  L  GL + R+   A  +   M+   V A+   Y 
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 372 TFIDG 376
           T I G
Sbjct: 403 TLIHG 407



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 4/229 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PNT T + I+  L ++      + LF Q+      PNV T+  +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G  P+VV+ N +++   K G++D   +L++ M +   + +  TYN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G++      F +M+  G   +  +++  ++ +CK   V EA+ L+ ++  +G+     T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Y  L  G  +  + + A+ L  EM    V  +  TY   +DGLC   +V
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 9/179 (5%)

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           V PN  + N I+  L +    D + RL+  + +    PN FT+N ++D  C  G++   +
Sbjct: 153 VPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            LF  M+ MGC  D  ++N LI+GY K  E++E   L  E+   G K  VVTYN L +  
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKGNSGN 396
            +  + E A   F  M+   V A+  T+ TF+D  C    VR     F   R +G + N
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 197/434 (45%), Gaps = 76/434 (17%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+  L KN      + +   + +IG+  D  TY  L+  FC+M ++ +   I   ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R  F P+    + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LFKEM  G G      +PN VTY+I+I  LCK G ++ A  LF +M+ + +   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------------ 241
            Y SLI+G+C     + A+GLL  MV +G+ P   S + ++  LC+NG            
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 242 -----------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                  KMD A+RL D M+  +V PN  T+N +++G+CL G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA---------------------- 316
            +  +L+  M  MG K D+++Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 317 -------------LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
                          L++E+  +G+K  +V++  + +   +    E++  LF EM+   V
Sbjct: 590 LYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 364 AADTCTYRTFIDGL 377
             D   Y   ID L
Sbjct: 650 KPDDIFYTCMIDAL 663



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 33/398 (8%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +L  L K + +     LF ++   G+  D Y Y+  I  +C+   +     +  R+    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
              + V +  L+ GLC   R+ EA  +   +   G   + +TY TL+ G CR     +AL
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 137 NLFKEM-------TNGN------------------------GEIGVVFKPNTVTYSIIID 165
            +  +M       +  N                        G++G+V  PN   Y+ +ID
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV--PNVFAYNALID 346

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
            LCK    D A  LF +M    L PN VTY  LIH  C      +A  L  +M D+G++ 
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
            V   N ++N  CK G +D A  LL  MV+  + P A +Y+ L+ G C  G ++   EL 
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELH 466

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G   +++++  LING+CK+K+++EA  L++++    + P  VT+N +  G   +
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +A +L+ +M    +  D  TYR+ I GLC+   V
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 190/395 (48%), Gaps = 30/395 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S++ L+  L +N    + + L + +   G+  + YT++ LIN FCK  ++     +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF  +I+G C    I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 129 TGHTIVALNLFKEMTNGNG----------------------------EIGVV-FKPNTVT 159
           T     A     ++ N                               E+ V   K + V+
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++II+    K+   +K+  LF +MK + + P+ + YT +I       +  +A     +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G  PN V+  V++N LCK+G + +A  L   M+  +V PN FTYN  +D F   G + 
Sbjct: 681 IDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K+L  +M   G      S+NILI G CK  +++EA+ L  ++   G  P  ++Y+T+ 
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           H L ++    +A +L+ EM    +  D   Y  FI
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 29/375 (7%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S G+  + YT S ++    K+ Q +L   +F ++L+S    +   +T+ I+  C    + 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-------------- 144
            A  L  ++++ G + + + YN L+ GLC+      A+ +   M N              
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 145 ---------------GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                           +  I + F P+    S +ID L K+  V++A  L  ++    + 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV  Y +LI   C    +++A  L  EM  +G++PN V+  ++++ LCK G +++A  L
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            D M    ++   + YN+L++G+C  G ++R + L   M   G      SY+ LI G C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
           N ++  A+ L+ E+  +GI     T+  L +G  + ++ + A +LF +M  ++V  +  T
Sbjct: 456 NGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 370 YRTFIDGLCVRPQVR 384
           +   I+G C+   +R
Sbjct: 516 FNVMIEGYCLVGNIR 530



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           SF I++    K    +    LF+ +   G+ PD   Y+ +I+   K   +      + ++
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +   ++PN VT T LI  LC    +  A  L  ++ A    PN  TYN  ++     G  
Sbjct: 680 VIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L   M  G+         + V+++I+I GLCK G + +A +L  ++     +P+ 
Sbjct: 740 EKAKDLHSAMLQGH-------LASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDC 792

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           ++Y+++IH  C   D N+A  L  EM+ +G++P+VV+ N+ +     +G+ D A  +   
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852

Query: 253 MVQCDVRPNAFTYNTLMDGFCL 274
           M++  V+PN  TY  L+ G  L
Sbjct: 853 MIRSGVQPNWDTYRALLSGISL 874



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%)

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +  G+  N  +++ I+  L K  +   A  L D M+Q  V  + + Y   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           +  + L V MES G K     YN+L+ G CKN  V+EA+ + N +   G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 339 FHGLFEIRQAERALKLFVEM 358
            +G   + + E AL++  +M
Sbjct: 275 VYGFCRMEELEMALRITHDM 294



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%)

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L L +   +  N +T + ++       +    ++LF  M   G   D++ Y   I  YC
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +++ ++ A  L   +  +G+K + V YN L +GL +  + + A+++   M    V AD  
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 369 TYRTFIDGLC 378
           TYRT + G C
Sbjct: 270 TYRTLVYGFC 279


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N++L  + K+K  + V SLF+ ++  G+ P++ T++ILIN  C  G +     +
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  + F P +VT+ +L+   C + R   A  L   +   G E +V TYN  I+ LC 
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +  A  L K+M         +  PN VTY+ +I+G  KEG +  A ++F +M   +L
Sbjct: 316 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN VTY +LI G CH  D+ EA  LL  M   G++ N V+   ++N LCK+ K + A R
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M   D+      Y  L+DG C  G ++   +L  +M   G   D  +Y+ LING+C
Sbjct: 430 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   ++ A  +   +   G+    + Y+TL +   +      A+K++  M  N   AD  
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549

Query: 369 TYRTFIDGLC 378
           T    +  LC
Sbjct: 550 TCNVLVSSLC 559



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 175/370 (47%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N LL    K   Y   + L   +   G+  D+ TY++ I+  C   + +  +++
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +   +PN VT+ +LI G   E +I  AA +F ++  F   PN +TYN LI G C 
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL L   M           + N VTY  +++GLCK    + AK L  +M+  ++
Sbjct: 386 VGDFEEALRLLDHMEAAG------LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 439

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
               + YT LI G C     +EA  L+  M   GV P+V++ + ++N  C+ G + +A  
Sbjct: 440 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++  M +  +  N   Y+TL+  FC  G +    +++  M   G   D F+ N+L++  C
Sbjct: 500 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 559

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++ ++ EA      +   G+ P  +TY+ + +G   I     A   F +M          
Sbjct: 560 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 619

Query: 369 TYRTFIDGLC 378
           TY + + GLC
Sbjct: 620 TYGSLLKGLC 629



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 177/360 (49%), Gaps = 29/360 (8%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K + YD+  S+ + L                   C+MG  S    IFG ++ +    N
Sbjct: 122 LVKARMYDSAKSILRHL-------------------CQMGIGSKS--IFGALMDTYPLCN 160

Query: 81  VV--TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
            +   F  LI+    E  I  A   F  +   G +P+V T N ++  + +   T +  +L
Sbjct: 161 SIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 220

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
           F+EM++     G+   PN  T++I+I+GLC EG + KA  L  QM+     P +VTY +L
Sbjct: 221 FREMSDK----GIC--PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 274

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           ++ +C    +  A  L+  M+ +G++ +V + NV ++ LC N +   A  LL  M +  +
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 334

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN  TYNTL++GF   GKI    ++F  M       +  +YN LI G+C   + EEAL 
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L + +   G++   VTY TL +GL +  + E A +L   M+ ND+      Y   IDGLC
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 197/450 (43%), Gaps = 79/450 (17%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+ +  L  N        L K++    + P+  TY+ LIN F K G++ +   +F 
Sbjct: 303 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 362

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + +   +PN VT+ +LI G C      EA  L   ++A G   N +TY TL+NGLC+  
Sbjct: 363 EMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 422

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +A  L + M   +  +G       + Y+++IDGLCK G +D+A +L   M  + +NP
Sbjct: 423 KFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 476

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV---------------------- 228
           +V+TY+SLI+GFC   +   AK ++  M   G+  N +                      
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 536

Query: 229 -------------SSNVIMNELCKNGKMDNASRLL------------------------- 250
                        + NV+++ LC++GK+  A + L                         
Sbjct: 537 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 596

Query: 251 ----------DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
                     D M++C   P+ FTY +L+ G C  G +   K+    +  +    D   Y
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 656

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF-VEMQ 359
           N L+   CK+  + EA++L++++    + P   TY++L  GL    +A  A+ LF   M 
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 360 GNDVAADTCTYRTFIDGLCV--RPQVRFTY 387
              +  +   Y   +DGL     P+  F +
Sbjct: 717 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 175/400 (43%), Gaps = 42/400 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N+L+  L ++            ++ IGL P+  TY  +IN +  +G     F  F  +++
Sbjct: 552 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 611

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+  T+ SL+KGLC    +VEA     +L       + + YNTL+   C++G+   
Sbjct: 612 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 671

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYENLNPNVV 193
           A+ LF +M   N        P++ TYS ++ GLC++G    A  LF   M    L PN V
Sbjct: 672 AVALFDKMVQNN------VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 725

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT L+ G   A     A     EM+ +G  P+ V+ N I++   + G+M  A+     M
Sbjct: 726 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM------------------------E 289
               V PN  TYN L+ GF     + R   L+ +M                         
Sbjct: 786 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 290 SMGCK-----------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            +G K            D F++NILIN Y ++ ++ +A  L N +   G+ P   TYN +
Sbjct: 846 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           F+GL +      +  +  EM  N V      Y T I+G+C
Sbjct: 906 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 945



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L K  +         RL+ I    D   Y+ L+   CK G +     +
Sbjct: 616 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 675

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE-PNVITYNTLINGLC 127
           F +++++   P+  T++SL+ GLC + + V A  LF      G   PN + Y  L++GL 
Sbjct: 676 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 735

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   A   F+EM            P+TV ++ IID   + G + KA + F  M++  
Sbjct: 736 KAGHPKAAFYFFEEMMKKGT------CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN+ TY  L+HGF           L   M+ +G+ P+ ++ + ++  L K+G  D   
Sbjct: 790 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           +LL  M+      + FT+N L++ +  +GK+ +  +L   M ++G   D  +YN + NG 
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K     E+  + +E+   G+ P    Y TL +G+  +   + A KL  EM+     +  
Sbjct: 910 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 969

Query: 368 CTYRTFIDGL 377
                 + GL
Sbjct: 970 VAESAMVRGL 979



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 180/417 (43%), Gaps = 44/417 (10%)

Query: 1    MRHMHPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
            +  +H  P  V S  +N LL    K+ +    ++LF ++    + PD YTYS L+   C+
Sbjct: 641  LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 700

Query: 59   MGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
             G+      +FG  + R    PN V +T L+ GL        A   F ++   G  P+ +
Sbjct: 701  KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 760

Query: 118  TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
             +N +I+   R G  + A + F  M       GV   PN  TY+I++ G  K+  + +  
Sbjct: 761  AFNAIIDSCSRRGQMMKANDFFSTMR----WWGVC--PNLATYNILLHGFSKKQALLRYL 814

Query: 178  ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
             L+  M  E + P+ +T+ SLI G   +   +    LL +M+ +G   +  + N+++N+ 
Sbjct: 815  SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 874

Query: 238  CKNGKMDNASRLLDLMVQCDVRPNAFTYN------------------------------- 266
             ++GKM  A  L++ M    V P+  TYN                               
Sbjct: 875  SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 934

Query: 267  ----TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
                TL++G C  G I    +L   ME++G    + + + ++ G     + E+A+ + + 
Sbjct: 935  AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 994

Query: 323  LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +    + PT+ T+ TL H      +   ALKL   M+   +  D   Y   I G+C 
Sbjct: 995  MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCA 1051



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 6/351 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN ++   ++          F  +   G+ P+L TY+IL++ F K   +     +
Sbjct: 757  PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  ++R    P+ +TF SLI GL           L  K+   G   +  T+N LIN    
Sbjct: 817  YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 876

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +G    A +L   M      +GV   P+  TY+ I +GL K+    ++  +  +M    +
Sbjct: 877  SGKMRKAFDLVNFMNT----LGVF--PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV 930

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P    Y +LI+G C   D   A  L  EM   G   + V+ + ++  L   GK ++A  
Sbjct: 931  IPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAML 990

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +LD M++  + P   T+ TLM  FC   KI    +L   ME  G K D  +YN+LI G C
Sbjct: 991  VLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMC 1050

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
             N +   A  LY E+  + + P + TY  L   +       +  KL  ++Q
Sbjct: 1051 ANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 1101



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 6/320 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++++NILL   +K +     LSL+  +   G+FPD  T+  LI    K G   LG  +
Sbjct: 792  PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 851

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             G+++      +  TF  LI       ++ +A  L   +   G  P+  TYN + NGL +
Sbjct: 852  LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +  +  EM     E GV+  P    Y  +I+G+C+ G +  A +L  +M+    
Sbjct: 912  KSAFRESTVVLHEML----ENGVI--PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              + V  ++++ G  H     +A  +L  M+   + P + +   +M+  C++ K+  A +
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  +M  C ++ +   YN L+ G C  G      EL+  M       +  +Y +L++   
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1085

Query: 309  KNKEVEEALSLYNELPFKGI 328
                + +   L  +L  +G+
Sbjct: 1086 AANNLIQGEKLLTDLQERGL 1105



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 19/148 (12%)

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           L K    D+A  +L  + Q  +   +  +  LMD + L   I  V               
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSI-FGALMDTYPLCNSIPSV--------------- 165

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              +++LI  Y K   ++ A+  +  +   G KP+V T N +   + + ++ E    LF 
Sbjct: 166 ---FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR 222

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           EM    +  +  T+   I+GLCV   ++
Sbjct: 223 EMSDKGICPNVGTFNILINGLCVEGNLK 250


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 177/335 (52%), Gaps = 6/335 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+++ +L+   +++   +    LF  +   G+ PD+Y Y+ +IN  CK G +   FV+F 
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN  T+ +LI G C    +  A  +   +++ G + N + +NTL++G C+ G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L   M     EI      +  T +II  G C+    ++AK L L M+   + P
Sbjct: 378 MIDEALRLQNIMQQKGFEI------DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 431

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVV+++ LI  +C   ++ EA+ L   M  +G  P+VV+ N  +   CK GKM+ A +L+
Sbjct: 432 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 491

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + P+ +TY +L+DG   +G ++R  ELF  M  +G   +  +Y ++I+G  K+
Sbjct: 492 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 551

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
              +EA  LY+E+  +GI P    Y++L   L ++
Sbjct: 552 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 586



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 181/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL    + K    V  +   +    +  ++ TY++LI  + +  ++     +
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+    P+V  +TS+I   C    +  A  LF ++      PN  TY  LING C+
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M +   ++      N V ++ ++DG CK+G +D+A  L   M+ +  
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDV------NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 394

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  T   +  GFC +N   EAK LL+ M ++GV PNVVS +++++  CK      A R
Sbjct: 395 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 454

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M +    P+  TYN  ++ +C  GK+    +L   M+  G   D ++Y  LI+G  
Sbjct: 455 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 514

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  V+ AL L+NE+P  G+   VVTY  +  GL +  +A+ A KL+ EM    +  D  
Sbjct: 515 ASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDG 574

Query: 369 TYRTFIDGL 377
            Y + I  L
Sbjct: 575 IYSSLIASL 583



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 185/406 (45%), Gaps = 42/406 (10%)

Query: 7   SPPPVSSF-NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
            P  V  F ++L      N+ +D+ L +F      G   D  +    +    + G + L 
Sbjct: 113 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 172

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                +++ S     V ++T+++ GLC +  +V A AL  +L   G +P+VITYNTL+NG
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232

Query: 126 L-----------------------------------CRTGHTIVALNLFKEMTNGNGEIG 150
                                                R+     A  LF EM     E  
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE-- 290

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+   Y+ II+  CK G + +A  LF +M    L PN  TY +LI+G C A +   
Sbjct: 291 ----PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 346

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ ++ +M  +GV  N V  N +M+  CK G +D A RL ++M Q     +AFT N +  
Sbjct: 347 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 406

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC + +    K L ++ME  G   +  S++ILI+ YCK +   EA  L+  +  KG  P
Sbjct: 407 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +VVTYN       +  + E A KL  EMQ   +  DT TY + IDG
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 152/317 (47%), Gaps = 16/317 (5%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RSCF   +    S    LC E           ++   G E  V ++  +++GLC+ G  +
Sbjct: 154 RSCFEFLLALKRSGNMELCVE--------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 205

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  E+          FKP+ +TY+ +++G  +   V    E+   M+   ++ NV 
Sbjct: 206 RAKALMDELVCKG------FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 259

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT LI  +  ++   EA+ L  EM+ +G++P+V     I+N  CK G M  A  L D M
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + PNA+TY  L++G C  G++   + +   M+S G   +   +N L++GYCK   +
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 379

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EAL L N +  KG +    T N +  G     + E A +L + M+   VA +  ++   
Sbjct: 380 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439

Query: 374 IDGLCVRPQVRFTYARR 390
           ID  C   +  F  ARR
Sbjct: 440 IDIYC--KEQNFAEARR 454



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N  +    K    +    L   +   GL PD YTY+ LI+     G V     +
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 525

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +     NVVT+T +I GL  + R  EA  L+ ++   G  P+   Y++LI  L +
Sbjct: 526 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585

Query: 129 TGHTIVAL 136
            G  +  L
Sbjct: 586 VGPLVSGL 593


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+    +   +     L + + +   FP L TY+ L+   CK  QV+   + F  +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+S F P++V+F SL+ G C    I EA  LF +LK     P VITYNTLI+GLC  G+ 
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L KEMT+          P+  TY+I+++G  K G+V  A+  F +M  + L P+ 
Sbjct: 407 DAALRLKKEMTDQG------LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y + I G     D + A  +  EM+  G  P+V++ NV ++ LC+ G  + A  LL+ 
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV   + P+  TY ++++GF   G + + +E+F  M S G      +Y +LI+ +   + 
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A   ++++  K +   V+TYN + +GL   R+ + A K F EM+   +  +  +Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 373 FIDGLC 378
            I+  C
Sbjct: 641 LINESC 646



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 186/414 (44%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L    K    D  L L   +   G +P+  TY++L+N   K G++     +
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L S    +  T+  LI G C +   VEA  L  ++      P + TYNTL+ GLC+
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                     F +M          F P+ V+++ ++ G C+ G + +A  LF ++K  +L
Sbjct: 333 WVQVTGVRLRFSDMLKSK------FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDL 386

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+TY +LIHG C     + A  L  EM DQG+ P++ +  +++N   K G +  A  
Sbjct: 387 VPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARG 446

Query: 249 LLDLMVQCDVRPNAFTYNT---------------------LMDGF--------------C 273
             + M+   ++P+ F YNT                     L  GF              C
Sbjct: 447 FFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALC 506

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G      +L  +M S G   D  +Y  +ING+ KN  + +A  ++NE+  KG+ P+VV
Sbjct: 507 QQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV 566

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           TY  L H     +  + A   F +M    V A+  TY   I+GLC+  ++   Y
Sbjct: 567 TYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 8/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L          +++  +   G+ P + TY+ +++ +CK G+V     +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +  R C+ PN VT+  L+ GL  +  + +A  L  ++   G   +  TYN LING C
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + A +L +EM N          P   TY+ ++ GLCK   V   +  F  M    
Sbjct: 297 QKGLFVEAFDLVEEMVNRRA------FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++V++ SL++G+C     +EA  L  E+  + + P V++ N +++ LC  G +D A 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL   M    + P+ FTY  L++G    G ++  +  F  M S G K D F+YN  I G 
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +   A S+  E+   G  P V+TYN   H L +    E A  L   M  + +  D 
Sbjct: 471 MKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDH 530

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY + I+G      +R
Sbjct: 531 VTYTSIINGFVKNGHLR 547



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 12/351 (3%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L +F ++   GL PD+   + ++        +S    ++G + +    P VVT+ +++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C E R+ +A  L ++++  GC PN +TYN L+NGL + G    A  L +EM N    + 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV- 283

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
                +  TY+ +I+G C++G   +A +L  +M      P + TY +L++G C    W +
Sbjct: 284 -----SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC---KWVQ 335

Query: 211 AKGLLI---EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             G+ +   +M+     P++VS N ++   C+ G +  A  L D +   D+ P   TYNT
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C+ G ++    L   M   G   D F+Y IL+NG  K   V  A   +NE+  KG
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +KP    YNT   G  +I     A  +  EM       D  TY  F+  LC
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALC 506



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 29/363 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S++N L+  L K      V   F  +      PD+ +++ L+  +C+ G +S  F++
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P V+T+ +LI GLC    +  A  L  ++   G  P++ TY  L+NG  +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 129 TGHTIVALNLFKEM-------------TNGNGEIGVV----------------FKPNTVT 159
            G+  +A   F EM             T   GE+ +                 F P+ +T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++ +  LC++G  ++A +L   M  + L P+ VTYTS+I+GF       +A+ +  EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +GV P+VV+  V+++       +D A      M++  V  N  TYN +++G C+T +++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              + F  ME  G   + FSY ILIN  C     EEAL LY E+  + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 340 HGL 342
             L
Sbjct: 678 KNL 680



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 162/309 (52%), Gaps = 12/309 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L    + D  L L K +   GLFPD++TY+IL+N   K+G VS+    
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT---KLKAFGCEPNVITYNTLING 125
           F  +L     P+   + + I G   E +I + +  F+   ++ A G  P+VITYN  ++ 
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G+   A +L + M +     G++  P+ VTY+ II+G  K G + KA+E+F +M  
Sbjct: 505 LCQQGNFEEACDLLENMVSD----GLI--PDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P+VVTYT LIH        + A     +M+++ V  NV++ N I+N LC   +MD 
Sbjct: 559 KGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDE 618

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +  D M +  + PN F+Y  L++  C  G       L+  M     + D F++++ + 
Sbjct: 619 AYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678

Query: 306 GYCKNKEVE 314
              ++ +V 
Sbjct: 679 NLHRDYQVH 687



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 11/241 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N+ +  L +  +++    L + + S GL PD  TY+ +IN F K G +     
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +L    AP+VVT+T LI    A+  +  A   F+K+       NVITYN +INGLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            T     A   F EM     E G++  PN  +Y+I+I+  C  G+ ++A  L+ +M    
Sbjct: 612 MTRRMDEAYKYFDEME----EKGIL--PNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+  T++  +       D+       +E + Q V+ N+   NV +    KN   +N +
Sbjct: 666 IQPDSFTHSVFLKNL--HRDYQVHAVQCVESLIQNVEDNI---NVRLLRPRKNVMEENFA 720

Query: 248 R 248
           R
Sbjct: 721 R 721



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%)

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+  G+ P+V + N I+  L     +  A  +  +M Q  ++P   TYNT++D +C  G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++++  EL   M+  GC  +D +YN+L+NG  K  E+E+A  L  E+   G+  +  TYN
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L +G  +      A  L  EM          TY T + GLC   QV
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M+ M  S   P + ++N +L    K   +   + L   + S G+  D+ TY++LI+  C+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             +++ G+++   + +    PN VT+ +LI G   E +++ A+ L  ++ +FG  PN +T
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 119 YNTLINGLCRTGHTIVALNLF-----KEMTNGNGEIGVVF-------------------K 154
           +N LI+G    G+   AL +F     K +T      GV+                    K
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 155 PNTV-----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            N V     TY+ +IDGLCK GF+D+A  L  +M  + ++P++VTY++LI+GFC    + 
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            AK ++  +   G+ PN +  + ++   C+ G +  A R+ + M+      + FT+N L+
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
              C  GK+   +E    M S G   +  S++ LINGY  + E  +A S+++E+   G  
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615

Query: 330 PTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           PT  TY +L  GL +   +R+AE+ LK    +     A DT  Y T +  +C
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLK---SLHAVPAAVDTVMYNTLLTAMC 664



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FNIL+  L     ++    L +++   G  P + TY+ +++ +CK G+      +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       +V T+  LI  LC  +RI +   L   ++     PN +TYNTLING   
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  ++A  L  EM      +     PN VT++ +IDG   EG   +A ++F  M+ + L
Sbjct: 351 EGKVLIASQLLNEM------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V+Y  L+ G C   +++ A+G  + M   GV    ++   +++ LCKNG +D A  
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME------------------- 289
           LL+ M +  + P+  TY+ L++GFC  G+    KE+   +                    
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524

Query: 290 SMGC----------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            MGC                  D F++N+L+   CK  +V EA      +   GI P  V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +++ L +G     +  +A  +F EM          TY + + GLC    +R
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +LG + K+    +V S  K +    + PD+ T++ILIN  C  G       +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +S +AP +VT+ +++   C + R   A  L   +K+ G + +V TYN LI+ LCR
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +        L ++M         +  PN VTY+ +I+G   EG V  A +L  +M    L
Sbjct: 316 SNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN VT+ +LI G     ++ EA  +   M  +G+ P+ VS  V+++ LCKN + D A  
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  V     TY  ++DG C  G ++    L   M   G   D  +Y+ LING+C
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + A  +   +   G+ P  + Y+TL +    +   + A++++  M       D  
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549

Query: 369 TYRTFIDGLCVRPQV 383
           T+   +  LC   +V
Sbjct: 550 TFNVLVTSLCKAGKV 564



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 179/367 (48%), Gaps = 6/367 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S ++IL+    +       L +F+ +   G  P +YT + ++    K G+    +     
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +L+    P+V TF  LI  LCAE    +++ L  K++  G  P ++TYNT+++  C+ G 
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+ L   M +     GV    +  TY+++I  LC+   + K   L   M+   ++PN
Sbjct: 284 FKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTY +LI+GF +      A  LL EM+  G+ PN V+ N +++     G    A ++  
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M    + P+  +Y  L+DG C   + +  +  ++ M+  G      +Y  +I+G CKN 
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            ++EA+ L NE+   GI P +VTY+ L +G  ++ + + A ++   +    ++ +   Y 
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517

Query: 372 TFIDGLC 378
           T I   C
Sbjct: 518 TLIYNCC 524



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 188/417 (45%), Gaps = 31/417 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L ++        L + +    + P+  TY+ LIN F   G+V +   +  
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L    +PN VTF +LI G  +E    EA  +F  ++A G  P+ ++Y  L++GLC+  
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422

Query: 131 HTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVTYS 161
              +A   +  M                     NG  +  VV           P+ VTYS
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I+G CK G    AKE+  ++    L+PN + Y++LI+  C      EA  +   M+ +
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G   +  + NV++  LCK GK+  A   +  M    + PN  +++ L++G+  +G+  + 
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  M  +G     F+Y  L+ G CK   + EA      L         V YNTL   
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ--VRFTYARRKGNSGN 396
           + +     +A+ LF EM    +  D+ TY + I GLC + +  +   +A+     GN
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)

Query: 68  IFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +FG ++   R C   N   +  LI+    E  I ++  +F  +  +G  P+V T N ++ 
Sbjct: 148 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 206

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            + ++G  +   +  KEM            P+  T++I+I+ LC EG  +K+  L  +M+
Sbjct: 207 SVVKSGEDVSVWSFLKEMLKRK------ICPDVATFNILINVLCAEGSFEKSSYLMQKME 260

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P +VTY +++H +C    +  A  LL  M  +GV  +V + N+++++LC++ ++ 
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               LL  M +  + PN  TYNTL++GF   GK+    +L   M S G   +  ++N LI
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+      +EAL ++  +  KG+ P+ V+Y  L  GL +  + + A   ++ M+ N V 
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440

Query: 365 ADTCTYRTFIDGLC 378
               TY   IDGLC
Sbjct: 441 VGRITYTGMIDGLC 454



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 65/432 (15%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L KN   D  + L   ++  G+ PD+ TYS LIN FCK+G+      I  RI R   +PN
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512

Query: 81  VV-----------------------------------TFTSLIKGLCAESRIVEAAALFT 105
            +                                   TF  L+  LC   ++ EA     
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNG 147
            + + G  PN ++++ LING   +G  + A ++F EMT                     G
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632

Query: 148 EI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +            V    +TV Y+ ++  +CK G + KA  LF +M   ++ P+  TYT
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           SLI G C       A     E   +G V PN V     ++ + K G+        + M  
Sbjct: 693 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
               P+  T N ++DG+   GKI +  +L   M +     +  +YNIL++GY K K+V  
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +  LY  +   GI P  +T ++L  G+ E    E  LK+        V  D  T+   I 
Sbjct: 813 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 872

Query: 376 GLCVRPQVRFTY 387
             C   ++ + +
Sbjct: 873 KCCANGEINWAF 884



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L K  H        K L+++    D   Y+ L+   CK G ++    +
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
           FG +++    P+  T+TSLI GLC + + V A     + +A G   PN + Y   ++G+ 
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     +   ++M N      +   P+ VT + +IDG  + G ++K  +L  +M  +N
Sbjct: 736 KAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+ TY  L+HG+    D + +  L   ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 790 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L   +   V  + +T+N L+   C  G+IN   +L   M S+G   D  + + +++  
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            +N   +E+  + +E+  +GI P    Y  L +GL  +   + A  +  EM  + +
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 21/337 (6%)

Query: 44   PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
            P+L TY+IL++ + K   VS  F+++  I+ +   P+ +T  SL+ G+C ES ++E    
Sbjct: 792  PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 848

Query: 104  FTKLKAF---GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
               LKAF   G E +  T+N LI+  C  G    A +L K MT+    +G+    +T   
Sbjct: 849  LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTC-- 902

Query: 161  SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
              ++  L +     +++ +  +M  + ++P    Y  LI+G C   D   A  +  EM+ 
Sbjct: 903  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962

Query: 221  QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
              + P  V+ + ++  L K GK D A+ LL  M++  + P   ++ TLM   C  G +  
Sbjct: 963  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022

Query: 281  VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              EL V M + G K D  SYN+LI G C   ++  A  LY E+   G      TY  L  
Sbjct: 1023 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1082

Query: 341  GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL     A           G D+       R FI  +
Sbjct: 1083 GLLARETA---------FSGADIILKDLLARGFITSM 1110



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++SF  L+    KN +    L L   +++ GL  DL +Y++LI   C  G ++L F +
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
            +  +    F  N  T+ +LI+GL A       A +  K
Sbjct: 1062 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 191/362 (52%), Gaps = 9/362 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  +  +G   + Y+Y+ILI   C    V    V+F  + R   +PNV  FT LI GLC
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R+ +A  LF  +   G  P+V+TYN +I G  + G    AL + KE+   NG     
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 353

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+  TY+ +I GLC +   ++A+EL      E   P VVT+T+LI+G+C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  +M+    + ++     ++N L K  ++  A  LL+ +    + PN  TY +++DG+
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +GK++   E+   ME  GC+ + ++YN L+ G  K+K++ +A++L  ++   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARR 390
           +TY TL  G  +    + A +LF  M+ N +  D   Y    D LC   R +  +++  R
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 391 KG 392
           KG
Sbjct: 593 KG 594



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 187/385 (48%), Gaps = 12/385 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F  L+  L K         L   +++ GL P++ TY+ +I+ +CK G+V +   +   + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    PN  T+ SL+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C      
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF EM   NG      KP+   Y+++ D LCK G   +A+E +  +  + +    V
Sbjct: 550 NAFRLF-EMMEQNG-----LKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKV 600

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT+LI GF  A + + A  L+  M+D+G  P+  + +V+++ LCK  +++ A  +LD M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               ++   F Y  L+D     GK +  K ++  M S G K    +Y + IN YCK   +
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  L  ++  +G+ P VVTYN L  G   +   +RA      M G     +  TY   
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 374 IDGLCVRPQVRFTYARRKGNSGNTN 398
           +  L    +    Y R    SG  N
Sbjct: 781 LKHLL---KGNLAYVRSVDTSGMWN 802



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 194/439 (44%), Gaps = 78/439 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+  L K+        LF  +   G+ P + TY+ +I  + K+G+++     
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 67  ------------------VIFG--------------RILRSCFAPNVVTFTSLIKGLC-- 92
                             +I+G                ++  F P VVTFT+LI G C  
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405

Query: 93  ---------------------------------AESRIVEAAALFTKLKAFGCEPNVITY 119
                                             + R+ EA  L  ++ A G  PNVITY
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            ++I+G C++G   +AL + K M     +      PN  TY+ ++ GL K+  + KA  L
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQ------PNAWTYNSLMYGLVKDKKLHKAMAL 519

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+ + + PNV+TYT+L+ G C  +D++ A  L   M   G++P+  +  V+ + LCK
Sbjct: 520 LTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK 579

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G+ + A      +V+  V      Y TL+DGF   G  +    L   M   GC  D ++
Sbjct: 580 AGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 636

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y++L++  CK K + EAL + +++  +GIK T+  Y  L   +    + + A +++ EM 
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 360 GNDVAADTCTYRTFIDGLC 378
            +       TY  FI+  C
Sbjct: 697 SSGHKPSATTYTVFINSYC 715



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 181/406 (44%), Gaps = 45/406 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L   K     L LF  +   G  P++  ++ LI+  CK G+V    ++F  +
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++   P+V+T+ ++I G     R+ +A  +   ++  GC P+  TYNTLI GLC    T
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 373

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC------------------------ 168
             A  L       N  +   F P  VT++ +I+G C                        
Sbjct: 374 EEAEELL------NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 169 -----------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                      K+  + +AKEL  ++    L PNV+TYTS+I G+C +   + A  +L  
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M   G QPN  + N +M  L K+ K+  A  LL  M +  + PN  TY TL+ G C    
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    LF  ME  G K D+ +Y +L +  CK    EEA   Y+ +  KG+  T V Y T
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 604

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L  G  +    + A  L   M       D+ TY   +  LC + ++
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 177/417 (42%), Gaps = 54/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V ++  LL        +D    LF+ +   GL PD + Y++L +  CK G+    +  
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 67  ------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
                                          +  R++     P+  T++ L+  LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA  +  ++   G +  +  Y  LI+ + R G    A  ++ EMT+         KP+
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG------HKPS 703

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY++ I+  CKEG ++ A++L L+M+ E + P+VVTY  LI G  H    + A   L 
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNG----------------KMDNASRLLDLMVQCDVRP 260
            MV    +PN  +  +++  L K                  ++D   +LL+ MV+  + P
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              TY++L+ GFC  G++     L   M   G   ++  Y +LI   C  K  E+ALS  
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + +   G +P + +Y  L  GL      E+   LF ++       D   ++   DGL
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           ++++L   G  P+ +TYNT+I   C+ G    A   F+ +  G  E      P T T + 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNA 223

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G C+ G + KA  LFL M       N  +YT LI G C A    +A  L + M   G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN--- 279
             PNV +   +++ LCK+G++ +A  L D M Q  V P+  TYN ++ G+   G++N   
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           ++KEL   ME  GC  DD++YN LI G C  K  EEA  L N    +G  PTVVT+  L 
Sbjct: 344 KIKEL---MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLI 399

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G     + + AL++  +M  +    D   +   I+ L  + +++
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 22/322 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++LL  L K K  +  L +  +++  G+   ++ Y+ILI+   + G+      +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  S   P+  T+T  I   C E R+ +A  L  K++  G  P+V+TYN LI+G   
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
            G+   A +  K M      +G   +PN  TY +++  L K                   
Sbjct: 752 MGYIDRAFSTLKRM------VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D   +L  +M    LNP V TY+SLI GFC A    EA  LL  M  +G+ PN     +
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++   C     + A   + +M +C  +P   +Y  L+ G C  G   +VK LF  +  +G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 293 CKHDDFSYNILINGYCKNKEVE 314
             HD+ ++ IL +G  K   V+
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVD 947



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 109/219 (49%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+  +  L +    +    ++ Q+  + L P+ VTY ++I  +C   D   A      ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G++P   + N ++   C+ G++  A  L  +M     + N ++Y  L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +   LF+ M+  GC  +  ++  LI+G CK+  V +A  L++ +P  G+ P+V+TYN + 
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  ++ +   ALK+   M+ N    D  TY T I GLC
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 201/440 (45%), Gaps = 64/440 (14%)

Query: 2   RHMHPSPP--PVSSFNILLGCLAKNKHYDTVLSLFKRLNS-------------------- 39
           R + PS P  P+   N LL  LA+++ +  + SL  R+ +                    
Sbjct: 30  RVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIP 89

Query: 40  -----------IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSL 87
                       GL PD Y Y+  +  +C+ G ++    +F  + LR C      T+T+L
Sbjct: 90  AAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTAL 148

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT--------------- 132
           + GL     + EA A+F  ++A  C P+   Y T+++GLC  G T               
Sbjct: 149 LHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 133 ---IVALNLFKEMTNGNGEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKE 178
              IV  N   +     GE+    K           PN  TY+ +I GLCK G V++A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF +M    L PNVVTYT+LI G C+      A  LL  M   G+ PN  + +V+++ LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K++ A   L  +V+  V+ N   Y +L+DG C TGKI+   EL   M S G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ LI+G C+ K++ +A  +  ++  KGI+ + VTY  +   L     +E   K+F +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               +  D  TY  F+   C
Sbjct: 449 IATGINPDIVTYTVFVRSYC 468



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  LL  L         +++F  + +    PD + Y+ +++  C+ G+     V+    
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + + F PN+V + +LI G C    +  A  +F  +    C PNV TY  LI+GLC++G  
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ LF  M           +PN VTY+ +I G C EG +  A  L   M+   L PN 
Sbjct: 264 ERAMVLFSRMVEAG------LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T++ LI   C      EA+  L  +V +GV+ N V    +++ LCK GK+D A  L+  
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+     P+A +Y++L+DG C   K+++   +   M   G +    +Y I+I+   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            E    +++++   GI P +VTY        E  + E A  + V+M    V  +  TY T
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 373 FIDG 376
            I G
Sbjct: 498 LIRG 501



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 184/378 (48%), Gaps = 9/378 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+         +  L +F+ ++     P++ TY+ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++ +   PNVVT+T+LI+G C E  +  A  L   ++  G  PN  T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +    LF       G      K N V Y+ +IDGLCK G +D A EL  +M  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +Y+SLI G C     ++A  +L +M+++G+Q + V+  +I++EL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+   + P+  TY   +  +C  G++   + + V M   G   +  +YN LI GY 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA--- 365
               V +A S +  +  KG KP   +Y  L   + +   ++ ++ ++      D+     
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY 563

Query: 366 DTCTYRTFIDGLCVRPQV 383
           D   ++  I GL  +  V
Sbjct: 564 DEIVWKILIYGLLQKGSV 581



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 10/306 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P +    +L+  L       +  +L +++ A     N+ TY TLIN  C  G    A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
              + +          P++  Y+  + G C+ G +  A  +F+ M          TYT+L
Sbjct: 95  LTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTAL 148

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +HG   A    EA  + + M      P+      +++ LC+ G+ + A  LL+  +    
Sbjct: 149 LHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN   YN L+DG+C  G++    ++F  M+   C  +  +Y  LI+G CK+ +VE A+ 
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L++ +   G++P VVTY  L  G       + A +L   M+ N +  +  T+   ID LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 379 VRPQVR 384
            R +V 
Sbjct: 329 KREKVE 334



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 44/273 (16%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV------ 67
           +  L+  L K    D    L +++ S G  PD ++YS LI+  C+  ++S   +      
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 68  -----------------------------IFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                                        IF +++ +   P++VT+T  ++  C E R+ 
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A ++  ++   G  PN++TYNTLI G    G    A + F+ M      +G  +KPN  
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM------VGKGWKPNED 528

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENL---NPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +Y++++  + K+   D + +++     ++L   N + + +  LI+G        E   LL
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLL 588

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             M + G QP+   + +I  E+    ++   +R
Sbjct: 589 SVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 621



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%)

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N+ +   ++N  C  G +  A + L  ++   + P+++ Y + + G+C  G +     +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           V M   GC    F+Y  L++G      V EA++++  +      P    Y T+ HGL E 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
            + E A  L  E   N    +   Y   IDG C   ++       +G  GN
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L K    D    LF+++   G   +   Y+ LI  F   G+   G  I+  ++R  
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             P++    + +  +     + +  A+F  +K+FG  P+V +Y+ LI+GL + G      
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           N+F+ M+         F  +   Y+ ++DGLCK G VDKA E+  +MK ++++P V TY 
Sbjct: 581 NIFQAMSQQG------FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYG 634

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           S++ G    +  +EA  L  E   +G++ NV+  + +++   K G++D A  +L+ M++ 
Sbjct: 635 SIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK 694

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PN +T+N+LMD    T +I+     F SM+ M C  + ++Y+ILING C+ ++  +A
Sbjct: 695 GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 754

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
              + E+  +G+ P VVTY T+  GL ++     A  LF   + N    D+ ++   I+G
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEG 814

Query: 377 L 377
           +
Sbjct: 815 M 815



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 191/399 (47%), Gaps = 30/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN +L CL K +  D  L+LF  +      P++ TY+I+I+  C  G+V+  + I
Sbjct: 349 PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNIIIDMLCMAGRVNEAYKI 407

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PN+++   ++  LC  +++ EA  +F      GC PN +TY +LI+GL +
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
            G    A  LF++M +   +   +                              +P+   
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            +  +D + K G V+K + +F  MK     P+V +Y+ LIHG   A    E   +   M 
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            QG   +  + N +++ LCK+GK+D A  +L+ M    V P   TY +++DG     +++
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF   +S G + +   Y+ LI+G+ K   ++EA  +  E+  KG+ P V T+N+L 
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             L +  + + AL  F  M+    + +T TY   I+GLC
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLC 746



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 179/379 (47%), Gaps = 7/379 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N+ + C  K    D     F  L + GL PD  +Y+ ++   CK G++     +
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++      P    + ++I G  +  R  +A  L  +L+  GC P+V+++N+++  L +
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK 363

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL LF  M           KPN  TY+IIID LC  G V++A ++  +M+   L
Sbjct: 364 KRKVDEALTLFDVMKKDA-------KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+++   ++   C AN   EA  +     ++G  PN V+   +++ L K GK+D+A R
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M+      N   Y +L+  F + G+     +++  M   G + D    N  ++   
Sbjct: 477 LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVF 536

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  EVE+  +++ ++   G  P V +Y+ L HGL +  QA     +F  M     A D  
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDAR 596

Query: 369 TYRTFIDGLCVRPQVRFTY 387
            Y   +DGLC   +V   Y
Sbjct: 597 AYNAVVDGLCKSGKVDKAY 615



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 181/368 (49%), Gaps = 7/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++      + +D    L +RL   G  P + +++ ++ C  K  +V     +
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTL 373

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    PN+ T+  +I  LC   R+ EA  +  +++  G  PN+++ N +++ LC+
Sbjct: 374 FD-VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  +F+  +    E G    PN+VTY  +IDGL K+G +D A  LF +M     
Sbjct: 433 ANQLEEAHRIFESAS----ERGC--NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + N + YTSLI  F       +   +  EM+ +G +P++   N  M+ + K G+++    
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRA 546

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M      P+  +Y+ L+ G    G+      +F +M   G   D  +YN +++G C
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLC 606

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V++A  +  E+  K + PTV TY ++  GL +I + + A  LF E +   +  +  
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666

Query: 369 TYRTFIDG 376
            Y + IDG
Sbjct: 667 LYSSLIDG 674



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 180/358 (50%), Gaps = 7/358 (1%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L +++  +    +   +  +   P    Y++LI    +  Q      +  ++    
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           +  +V  FT+L++ L  E ++  A AL  ++K    EP+++ YN  I+   + G   +A 
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
             F E+   +G      +P+ V+Y+ ++  LCK G + +A+ELF QM+ E   P    Y 
Sbjct: 267 KFFHEL-KAHG-----LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYN 320

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           ++I G+  A  +++A  LL  + ++G  P+VVS N I+  L K  K+D A  L D+M + 
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK- 379

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
           D +PN  TYN ++D  C+ G++N   ++   ME  G   +  S NI+++  CK  ++EEA
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             ++     +G  P  VTY +L  GL +  + + A +LF +M      A+   Y + I
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 168/347 (48%), Gaps = 10/347 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           ++K +   G  PDL   +  ++C  K G+V  G  IF  +    F P+V +++ LI GL 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              +  E + +F  +   G   +   YN +++GLC++G    A  + +EM   +      
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH------ 625

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P   TY  I+DGL K   +D+A  LF + K + +  NV+ Y+SLI GF      +EA 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L EM+ +G+ PNV + N +M+ L K  ++D A      M +    PN +TY+ L++G 
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   K N+    +  M+  G   +  +Y  +I+G  K   + +A SL+      G  P  
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDS 805

Query: 333 VTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTCTYRTFIDGL 377
            ++N L  G+    +   A ++F E  ++G  +   TC   + +D L
Sbjct: 806 ASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCI--SLLDAL 850



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 8/364 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++  N  + C+ K    +   ++F+ + S G  PD+ +YSILI+   K GQ      I
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNI 582

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +  FA +   + +++ GLC   ++ +A  +  ++K     P V TY ++++GL +
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF+E  +   E+      N + YS +IDG  K G +D+A  +  +M  + L
Sbjct: 643 IDRLDEAYMLFEEAKSKGIEL------NVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV T+ SL+       + +EA      M +    PN  + ++++N LC+  K + A  
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  + PN  TY T++ G    G I     LF   ++ G   D  S+N LI G  
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMS 816

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                 EA  ++ E   +G +  V T  +L   L +    E+A    V    +++A    
Sbjct: 817 NANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA--AIVGAVLSEIAKSQH 874

Query: 369 TYRT 372
            YR+
Sbjct: 875 AYRS 878



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 9/247 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           ++H+HP+   V+++  ++  LAK    D    LF+   S G+  ++  YS LI+ F K+G
Sbjct: 623 VKHVHPT---VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVG 679

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           ++   ++I   +++    PNV T+ SL+  L     I EA   F  +K   C PN  TY+
Sbjct: 680 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYS 739

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LINGLCR      A   ++EM       G++  PN VTY+ +I GL K G +  A  LF
Sbjct: 740 ILINGLCRVQKYNKAFVFWQEMQKQ----GLI--PNVVTYTTMISGLAKVGNITDAYSLF 793

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            + K     P+  ++ +LI G  +AN   EA  +  E   +G + NV +   +++ L K 
Sbjct: 794 ERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKT 853

Query: 241 GKMDNAS 247
             ++ A+
Sbjct: 854 ECLEQAA 860



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 1/238 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F+P    Y+++I  L +    ++A EL  QM+      +V  +T+L+           A 
Sbjct: 172 FRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPAL 231

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ E+    ++P++V  NV ++   K G +D A +    +    +RP+  +Y +++   
Sbjct: 232 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVL 291

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G++   +ELF  ME+       ++YN +I GY   +  ++A  L   L  +G  P+V
Sbjct: 292 CKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSV 351

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           V++N++   L + R+ + AL LF  M+  D   +  TY   ID LC+  +V   Y  R
Sbjct: 352 VSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIR 408



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 2/175 (1%)

Query: 205 ANDWNEAKGLLIEMVDQGVQ-PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
           ++D    + +L EM   G   PN   + ++   L ++ ++++A R++  M     RP   
Sbjct: 119 SHDLAALEKVLEEMSHLGYGLPNPACAALVAT-LVRSRRLEDAFRVIGAMRHLKFRPPFS 177

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            Y  L+       +  R  EL   M+ +G +     +  L+    +  ++E AL+L +E+
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               ++P +V YN       +    + A K F E++ + +  D  +Y + +  LC
Sbjct: 238 KGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 171/318 (53%), Gaps = 16/318 (5%)

Query: 8   PPPVSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P  V S NIL+  L KNK   D+ L +F+ + + G  PD YTY  LIN  C++G +S   
Sbjct: 152 PSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAK 211

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + +  F+ +VVT+TSLI GLC  + + EA  L  ++K    EPNV TY++L++GL
Sbjct: 212 ELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGL 271

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ GH+  A+ L + M   +        PN VTYS +I+GLCKE  + +A E+  +M+ +
Sbjct: 272 CKGGHSSQAMQLLEVMDKKH------HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQ 325

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS-------SNVIMNELCK 239
            L PN   Y  +I G C A  + EA   + EMV  G+ PN  S        N+++  LC 
Sbjct: 326 GLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCN 385

Query: 240 NGKMDNASRL-LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           N     A +L L +  +C +     T++ L+  FC  G +++   +   M   GC  D+ 
Sbjct: 386 NVDPPRAFQLYLSMRTRC-ISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEG 444

Query: 299 SYNILINGYCKNKEVEEA 316
            +N++I G    K+V EA
Sbjct: 445 VWNVVIGGLWDRKKVREA 462



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 163/310 (52%), Gaps = 14/310 (4%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VALN 137
           P    + +++  L  E+ +  A   + +++  G   +V++ N LI  LC+   T+  AL 
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +F+EM N         +P++ TY  +I+GLC+ G + +AKELF +M+ +  + +VVTYTS
Sbjct: 178 IFQEMPNRG------CQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTS 231

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LIHG C +N+ +EA GLL EM    ++PNV + + +M+ LCK G    A +LL++M +  
Sbjct: 232 LIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKH 291

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
             PN  TY+TL++G C   K+    E+   M   G K +   Y  +I+G C     +EA 
Sbjct: 292 HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAA 351

Query: 318 SLYNELPFKGIKPT-------VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           +  +E+   GI P        V  +N +  GL       RA +L++ M+   ++ +  T+
Sbjct: 352 NFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTF 411

Query: 371 RTFIDGLCVR 380
              +   C R
Sbjct: 412 DCLVKCFCKR 421



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 15/368 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFV 67
           P   ++  +L  L +  H    +  ++ +  +G+   + + +ILI   CK  + V     
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +      P+  T+ +LI GLC    I EA  LF +++  G   +V+TY +LI+GLC
Sbjct: 178 IFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLC 237

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++ +   A+ L +EM   + E      PN  TYS ++DGLCK G   +A +L   M  ++
Sbjct: 238 QSNNLDEAIGLLEEMKRNDIE------PNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKH 291

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+VTY++LI+G C      EA  +L  M  QG++PN      I++ LC  G    A+
Sbjct: 292 HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAA 351

Query: 248 RLLDLMVQCDVRPNAFTY-------NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             +D MV   + PN  ++       N ++ G C      R  +L++SM +     +  ++
Sbjct: 352 NFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTF 411

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL-KLFVEMQ 359
           + L+  +CK  ++ +A  +  E+   G  P    +N +  GL++ ++   A  +L VE+Q
Sbjct: 412 DCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQ 471

Query: 360 GNDVAADT 367
              V A++
Sbjct: 472 QKFVEAES 479



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 41/308 (13%)

Query: 114 PNVITYNTLINGLCRTGHTI-VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC---- 168
           P  IT N+L+  L +    +  A+N+F   T    E G  F+ +  T+ +II  L     
Sbjct: 10  PKQIT-NSLVVQLIKAEKDVHKAVNMFDSAT---AEYGNGFRHDHETFGLIISRLVTVNQ 65

Query: 169 ---KEGFVDKAKE----------------------------LFLQMKYENLNPNVVTYTS 197
               EG +++ K+                            +F +M+   L P    Y +
Sbjct: 66  FRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLT 125

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK-MDNASRLLDLMVQC 256
           ++      N    A G   EM + G+  +VVS N+++  LCKN + +D+A R+   M   
Sbjct: 126 ILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNR 185

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +P+++TY TL++G C  G I+  KELF  ME  G      +Y  LI+G C++  ++EA
Sbjct: 186 GCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEA 245

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + L  E+    I+P V TY++L  GL +   + +A++L   M       +  TY T I+G
Sbjct: 246 IGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLING 305

Query: 377 LCVRPQVR 384
           LC   ++R
Sbjct: 306 LCKERKLR 313


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 177/335 (52%), Gaps = 6/335 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V+++ +L+   +++   +    LF  +   G+ PD+Y Y+ +IN  CK G +   FV+F 
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN  T+ +LI G C    +  A  +   +++ G + N + +NTL++G C+ G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL L   M     EI      +  T +II  G C+    ++AK L L M+   + P
Sbjct: 382 MIDEALRLQNIMQQKGFEI------DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 435

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVV+++ LI  +C   ++ EA+ L   M  +G  P+VV+ N  +   CK GKM+ A +L+
Sbjct: 436 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 495

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + P+ +TY +L+DG   +G ++R  ELF  M  +G   +  +Y ++I+G  K+
Sbjct: 496 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 555

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
              +EA  LY+E+  +GI P    Y++L   L ++
Sbjct: 556 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 590



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 181/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LL    + K    V  +   +    +  ++ TY++LI  + +  ++     +
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L+    P+V  +TS+I   C    +  A  LF ++      PN  TY  LING C+
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +  +M +   ++      N V ++ ++DG CK+G +D+A  L   M+ +  
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDV------NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +  T   +  GFC +N   EAK LL+ M ++GV PNVVS +++++  CK      A R
Sbjct: 399 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L  +M +    P+  TYN  ++ +C  GK+    +L   M+  G   D ++Y  LI+G  
Sbjct: 459 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +  V+ AL L+NE+P  G+   VVTY  +  GL +  +A+ A KL+ EM    +  D  
Sbjct: 519 ASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDG 578

Query: 369 TYRTFIDGL 377
            Y + I  L
Sbjct: 579 IYSSLIASL 587



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 185/406 (45%), Gaps = 42/406 (10%)

Query: 7   SPPPVSSF-NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
            P  V  F ++L      N+ +D+ L +F      G   D  +    +    + G + L 
Sbjct: 117 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 176

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                +++ S     V ++T+++ GLC +  +V A AL  +L   G +P+VITYNTL+NG
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236

Query: 126 L-----------------------------------CRTGHTIVALNLFKEMTNGNGEIG 150
                                                R+     A  LF EM     E  
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE-- 294

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+   Y+ II+  CK G + +A  LF +M    L PN  TY +LI+G C A +   
Sbjct: 295 ----PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 350

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ ++ +M  +GV  N V  N +M+  CK G +D A RL ++M Q     +AFT N +  
Sbjct: 351 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 410

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC + +    K L ++ME  G   +  S++ILI+ YCK +   EA  L+  +  KG  P
Sbjct: 411 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +VVTYN       +  + E A KL  EMQ   +  DT TY + IDG
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 152/317 (47%), Gaps = 16/317 (5%)

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           RSCF   +    S    LC E           ++   G E  V ++  +++GLC+ G  +
Sbjct: 158 RSCFEFLLALKRSGNMELCVE--------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVV 209

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  E+          FKP+ +TY+ +++G  +   V    E+   M+   ++ NV 
Sbjct: 210 RAKALMDELVCKG------FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 263

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT LI  +  ++   EA+ L  EM+ +G++P+V     I+N  CK G M  A  L D M
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + PNA+TY  L++G C  G++   + +   M+S G   +   +N L++GYCK   +
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 383

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EAL L N +  KG +    T N +  G     + E A +L + M+   VA +  ++   
Sbjct: 384 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443

Query: 374 IDGLCVRPQVRFTYARR 390
           ID  C   +  F  ARR
Sbjct: 444 IDIYC--KEQNFAEARR 458



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N  +    K    +    L   +   GL PD YTY+ LI+     G V     +
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 529

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +     NVVT+T +I GL  + R  EA  L+ ++   G  P+   Y++LI  L +
Sbjct: 530 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589

Query: 129 TGHTIVAL 136
            G  +  L
Sbjct: 590 VGPLVSGL 597


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 184/367 (50%), Gaps = 10/367 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L+   A N  ++     FKR    G      +   L+    K  + +    ++  ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIR 216

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR---TGH 131
               PNV TF  +I  LC   ++ +A  +   +K +G  PNV++YNTLI+G C+    G 
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  + KEM            PN  T++I+IDG  K+  +  + ++F +M  +++ PN
Sbjct: 277 MYKADAVLKEMVENE------VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           V+TY SLI+G C+    NEA G+  +MV  GVQPN+++ + ++N  CKNG M  A  + D
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            +     RP    YN L+D +C  GKI+    L   ME  G   D  +YN LI G C+N 
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +E A  L+++L  KG+ P +VT++ L  G     ++ +A  L  EM    +     TY 
Sbjct: 451 NIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 372 TFIDGLC 378
             + G C
Sbjct: 510 IMMKGYC 516



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 186/366 (50%), Gaps = 11/366 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG---QVSLG 65
           P V +FN+++  L K    +    + + +   G  P++ +Y+ LI+ +CK+G   ++   
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +   ++ +  +PN+ TF  LI G   +  +  +  +F ++      PNVITYN+LING
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC  G    A+ +  +M +     GV  +PN +TY  +I+G CK G + +A ++F  +K 
Sbjct: 341 LCNGGKINEAIGMRDKMVSA----GV--QPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   P    Y  LI  +C     ++   L  EM  +G+ P+V + N ++  LC+NG ++ 
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +L D +    + P+  T++ LM+G+C  G+  +   L   M  MG K    +YNI++ 
Sbjct: 455 AKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMK 513

Query: 306 GYCKNKEVEEALSLYNEL-PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           GYCK   ++ A ++  ++   + ++  V +YN L  G  +  + E A  L  EM    + 
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573

Query: 365 ADTCTY 370
            +  TY
Sbjct: 574 PNRITY 579



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 8/296 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +++FNIL+    K+ +    L +FK +    + P++ TY+ LIN  C  G+++    +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ +   PN++T+ SLI G C    + EA  +F  +K  G  P    YN LI+  C+
Sbjct: 354 RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK 413

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L +EM       G+V  P+  TY+ +I GLC+ G ++ AK+LF Q+  + L
Sbjct: 414 LGKIDDGFALKEEMERE----GIV--PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL 467

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VT+  L+ G+C   +  +A  LL EM   G++P  ++ N++M   CK G +  A+ 
Sbjct: 468 -PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 249 LLDLM-VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +   M  +  +R N  +YN L+ G+   GK+     L   M   G   +  +Y I+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 8/269 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L      +  + +  ++ S G+ P+L TY  LIN FCK G +     +
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDM 388

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P    +  LI   C   +I +  AL  +++  G  P+V TYN LI GLCR
Sbjct: 389 FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  LF ++TN          P+ VT+ I+++G C  G   KA  L  +M    L
Sbjct: 449 NGNIEAAKKLFDQLTNKG-------LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGL 501

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEM-VDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P  +TY  ++ G+C   +   A  +  +M  ++ ++ NV S NV++    + GK+++A+
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            LL+ M++  + PN  TY  + +     G
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 8/166 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L +N + +    LF +L + GL PDL T+ IL+  +C  G+     ++
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAML 492

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
              + +    P  +T+  ++KG C E  +  A  + T++ K      NV +YN L+ G  
Sbjct: 493 LKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           + G    A  L  EM     E G+V  PN +TY I+ + +  +GFV
Sbjct: 553 QKGKLEDANMLLNEML----EKGLV--PNRITYEIVKEEMVDKGFV 592


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 191/362 (52%), Gaps = 9/362 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF  +  +G   + Y+Y+ILI   C    V    V+F  + R   +PNV  FT LI GLC
Sbjct: 125 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 184

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R+ +A  LF  +   G  P+V+TYN +I G  + G    AL + KE+   NG     
Sbjct: 185 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 238

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P+  TY+ +I GLC +   ++A+EL      E   P VVT+T+LI+G+C A  +++A 
Sbjct: 239 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  +M+    + ++     ++N L K  ++  A  LL+ +    + PN  TY +++DG+
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C +GK++   E+   ME  GC+ + ++YN L+ G  K+K++ +A++L  ++   GI P V
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARR 390
           +TY TL  G  +    + A +LF  M+ N +  D   Y    D LC   R +  +++  R
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 477

Query: 391 KG 392
           KG
Sbjct: 478 KG 479



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 187/385 (48%), Gaps = 12/385 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F  L+  L K         L   +++ GL P++ TY+ +I+ +CK G+V +   +   + 
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R    PN  T+ SL+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C      
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF EM   NG      KP+   Y+++ D LCK G   +A+E +  +  + +    V
Sbjct: 435 NAFRLF-EMMEQNG-----LKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKV 485

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YT+LI GF  A + + A  L+  M+D+G  P+  + +V+++ LCK  +++ A  +LD M
Sbjct: 486 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               ++   F Y  L+D     GK +  K ++  M S G K    +Y + IN YCK   +
Sbjct: 546 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 605

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E+A  L  ++  +G+ P VVTYN L  G   +   +RA      M G     +  TY   
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665

Query: 374 IDGLCVRPQVRFTYARRKGNSGNTN 398
           +  L    +    Y R    SG  N
Sbjct: 666 LKHLL---KGNLAYVRSVDTSGMWN 687



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 194/439 (44%), Gaps = 78/439 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+  L K+        LF  +   G+ P + TY+ +I  + K+G+++     
Sbjct: 171 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 230

Query: 67  ------------------VIFG--------------RILRSCFAPNVVTFTSLIKGLC-- 92
                             +I+G                ++  F P VVTFT+LI G C  
Sbjct: 231 KELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 290

Query: 93  ---------------------------------AESRIVEAAALFTKLKAFGCEPNVITY 119
                                             + R+ EA  L  ++ A G  PNVITY
Sbjct: 291 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 350

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
            ++I+G C++G   +AL + K M     +      PN  TY+ ++ GL K+  + KA  L
Sbjct: 351 TSIIDGYCKSGKVDIALEVLKMMERDGCQ------PNAWTYNSLMYGLVKDKKLHKAMAL 404

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M+ + + PNV+TYT+L+ G C  +D++ A  L   M   G++P+  +  V+ + LCK
Sbjct: 405 LTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK 464

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G+ + A      +V+  V      Y TL+DGF   G  +    L   M   GC  D ++
Sbjct: 465 AGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 521

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y++L++  CK K + EAL + +++  +GIK T+  Y  L   +    + + A +++ EM 
Sbjct: 522 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 581

Query: 360 GNDVAADTCTYRTFIDGLC 378
            +       TY  FI+  C
Sbjct: 582 SSGHKPSATTYTVFINSYC 600



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 181/406 (44%), Gaps = 45/406 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+ IL+  L   K     L LF  +   G  P++  ++ LI+  CK G+V    ++F  +
Sbjct: 140 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 199

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++   P+V+T+ ++I G     R+ +A  +   ++  GC P+  TYNTLI GLC    T
Sbjct: 200 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 258

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC------------------------ 168
             A  L       N  +   F P  VT++ +I+G C                        
Sbjct: 259 EEAEELL------NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 169 -----------KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                      K+  + +AKEL  ++    L PNV+TYTS+I G+C +   + A  +L  
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M   G QPN  + N +M  L K+ K+  A  LL  M +  + PN  TY TL+ G C    
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    LF  ME  G K D+ +Y +L +  CK    EEA   Y+ +  KG+  T V Y T
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 489

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L  G  +    + A  L   M       D+ TY   +  LC + ++
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 535



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 177/417 (42%), Gaps = 54/417 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V ++  LL        +D    LF+ +   GL PD + Y++L +  CK G+    +  
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 67  ------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
                                          +  R++     P+  T++ L+  LC + R
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA  +  ++   G +  +  Y  LI+ + R G    A  ++ EMT+         KP+
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG------HKPS 588

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             TY++ I+  CKEG ++ A++L L+M+ E + P+VVTY  LI G  H    + A   L 
Sbjct: 589 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 648

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNG----------------KMDNASRLLDLMVQCDVRP 260
            MV    +PN  +  +++  L K                  ++D   +LL+ MV+  + P
Sbjct: 649 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 708

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
              TY++L+ GFC  G++     L   M   G   ++  Y +LI   C  K  E+ALS  
Sbjct: 709 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 768

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + +   G +P + +Y  L  GL      E+   LF ++       D   ++   DGL
Sbjct: 769 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 825



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           ++++L   G  P+ +TYNT+I   C+ G    A   F+ +  G        +P T T + 
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGG------LEPETFTCNA 108

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           ++ G C+ G + KA  LFL M       N  +YT LI G C A    +A  L + M   G
Sbjct: 109 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 168

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN--- 279
             PNV +   +++ LCK+G++ +A  L D M Q  V P+  TYN ++ G+   G++N   
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 228

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           ++KEL   ME  GC  DD++YN LI G C  K  EEA  L N    +G  PTVVT+  L 
Sbjct: 229 KIKEL---MEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLI 284

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G     + + AL++  +M  +    D   +   I+ L  + +++
Sbjct: 285 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 22/322 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++LL  L K K  +  L +  +++  G+   ++ Y+ILI+   + G+      +
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 576

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  S   P+  T+T  I   C E R+ +A  L  K++  G  P+V+TYN LI+G   
Sbjct: 577 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 636

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
            G+   A +  K M      +G   +PN  TY +++  L K                   
Sbjct: 637 MGYIDRAFSTLKRM------VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 690

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           +D   +L  +M    LNP V TY+SLI GFC A    EA  LL  M  +G+ PN     +
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++   C     + A   + +M +C  +P   +Y  L+ G C  G   +VK LF  +  +G
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 810

Query: 293 CKHDDFSYNILINGYCKNKEVE 314
             HD+ ++ IL +G  K   V+
Sbjct: 811 YNHDEVAWKILNDGLLKAGYVD 832



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 109/219 (49%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+  +  L +    +    ++ Q+  + L P+ VTY ++I  +C   D   A      ++
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G++P   + N ++   C+ G++  A  L  +M     + N ++Y  L+ G C    + 
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +   LF+ M+  GC  +  ++  LI+G CK+  V +A  L++ +P  G+ P+V+TYN + 
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  ++ +   ALK+   M+ N    D  TY T I GLC
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 254


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 95  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRV 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L T + A G +P+V TY+ LIN
Sbjct: 155 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLDK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q +++ +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 329 TAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRL-KTAMHASG-----VQPDVYTYSVLINGLCKESKMDDAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           C+ G +  A  L+D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 287 CRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+     +A  +  E+   G+KP  +TY  + +   +        KL  E
Sbjct: 347 VGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G C+  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLC 357



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+++ ++
Sbjct: 125 EEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+D+G+ 
Sbjct: 179 NGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +   A K+  EM    +  DT TY   I+  C +  V
Sbjct: 359 EGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDV 397



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 10/229 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L    +P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N ++      + V Y+ +I GLC+EG    A+++  
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQL------DDVGYTALISGLCQEGRYLDAEKVLR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+ +TYT +I+ FC   D W  +K LL EM   G  P+VV+
Sbjct: 371 EMLSVGLKPDTITYTMIINEFCKKGDVWTGSK-LLKEMQRDGQMPSVVT 418



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 142 LMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL      ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGX 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEHRK 335


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V + N++L  + K+K  + V SLF+ ++  G+ P++ T++ILIN  C  G +     +
Sbjct: 947  PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++  + F P +VT+ +L+   C + R   A  L   +   G E +V TYN  I+ LC 
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 1066

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +  A  L K+M         +  PN VTY+ +I+G  KEG +  A ++F +M   +L
Sbjct: 1067 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +PN VTY +LI G CH  D+ EA  LL  M   G++ N V+   ++N LCK+ K + A R
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            LL+ M   D+      Y  L+DG C  G ++   +L  +M   G   D  +Y+ LING+C
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +   ++ A  +   +   G+    + Y+TL +   +      A+K++  M  N   AD  
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300

Query: 369  TYRTFIDGLC 378
            T    +  LC
Sbjct: 1301 TCNVLVSSLC 1310



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 175/370 (47%), Gaps = 6/370 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P + ++N LL    K   Y   + L   +   G+  D+ TY++ I+  C   + +  +++
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 1076

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ +   +PN VT+ +LI G   E +I  AA +F ++  F   PN +TYN LI G C 
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    AL L   M           + N VTY  +++GLCK    + AK L  +M+  ++
Sbjct: 1137 VGDFEEALRLLDHMEAAG------LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 1190

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                + YT LI G C     +EA  L+  M   GV P+V++ + ++N  C+ G + +A  
Sbjct: 1191 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 1250

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            ++  M +  +  N   Y+TL+  FC  G +    +++  M   G   D F+ N+L++  C
Sbjct: 1251 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 1310

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            ++ ++ EA      +   G+ P  +TY+ + +G   I     A   F +M          
Sbjct: 1311 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 1370

Query: 369  TYRTFIDGLC 378
            TY + + GLC
Sbjct: 1371 TYGSLLKGLC 1380



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 177/360 (49%), Gaps = 29/360 (8%)

Query: 21   LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
            L K + YD+  S+ + L                   C+MG  S    IFG ++ +    N
Sbjct: 873  LVKARMYDSAKSILRHL-------------------CQMGIGSKS--IFGALMDTYPLCN 911

Query: 81   VV--TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
             +   F  LI+    E  I  A   F  +   G +P+V T N ++  + +   T +  +L
Sbjct: 912  SIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 971

Query: 139  FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
            F+EM++     G+   PN  T++I+I+GLC EG + KA  L  QM+     P +VTY +L
Sbjct: 972  FREMSDK----GIC--PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 1025

Query: 199  IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
            ++ +C    +  A  L+  M+ +G++ +V + NV ++ LC N +   A  LL  M +  +
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 1085

Query: 259  RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
             PN  TYNTL++GF   GKI    ++F  M       +  +YN LI G+C   + EEAL 
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145

Query: 319  LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            L + +   G++   VTY TL +GL +  + E A +L   M+ ND+      Y   IDGLC
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 202/463 (43%), Gaps = 82/463 (17%)

Query: 11   VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            V ++N+ +  L  N        L K++    + P+  TY+ LIN F K G++ +   +F 
Sbjct: 1054 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 1113

Query: 71   RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             + +   +PN VT+ +LI G C      EA  L   ++A G   N +TY TL+NGLC+  
Sbjct: 1114 EMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 1173

Query: 131  HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               +A  L + M   +  +G       + Y+++IDGLCK G +D+A +L   M  + +NP
Sbjct: 1174 KFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 1227

Query: 191  NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV---------------------- 228
            +V+TY+SLI+GFC   +   AK ++  M   G+  N +                      
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 1287

Query: 229  -------------SSNVIMNELCKNGKMDNASRLL------------------------- 250
                         + NV+++ LC++GK+  A + L                         
Sbjct: 1288 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 1347

Query: 251  ----------DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
                      D M++C   P+ FTY +L+ G C  G +   K+    +  +    D   Y
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 1407

Query: 301  NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF-VEMQ 359
            N L+   CK+  + EA++L++++    + P   TY++L  GL    +A  A+ LF   M 
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467

Query: 360  GNDVAADTCTYRTFIDGLCV--RPQVRFTY---ARRKGNSGNT 397
               +  +   Y   +DGL     P+  F +     +KG   +T
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 1510



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 175/400 (43%), Gaps = 42/400 (10%)

Query: 15   NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            N+L+  L ++            ++ IGL P+  TY  +IN +  +G     F  F  +++
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 1362

Query: 75   SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
                P+  T+ SL+KGLC    +VEA     +L       + + YNTL+   C++G+   
Sbjct: 1363 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 1422

Query: 135  ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYENLNPNVV 193
            A+ LF +M   N        P++ TYS ++ GLC++G    A  LF   M    L PN V
Sbjct: 1423 AVALFDKMVQNN------VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 1476

Query: 194  TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
             YT L+ G   A     A     EM+ +G  P+ V+ N I++   + G+M  A+     M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 254  VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM------------------------E 289
                V PN  TYN L+ GF     + R   L+ +M                         
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 290  SMGCK-----------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +G K            D F++NILIN Y ++ ++ +A  L N +   G+ P   TYN +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 339  FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            F+GL +      +  +  EM  N V      Y T I+G+C
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 1696



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 7/370 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   ++  LL  L K  +         RL+ I    D   Y+ L+   CK G +     +
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 1426

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE-PNVITYNTLINGLC 127
            F +++++   P+  T++SL+ GLC + + V A  LF      G   PN + Y  L++GL 
Sbjct: 1427 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 1486

Query: 128  RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            + GH   A   F+EM            P+TV ++ IID   + G + KA + F  M++  
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGT------CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540

Query: 188  LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            + PN+ TY  L+HGF           L   M+ +G+ P+ ++ + ++  L K+G  D   
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600

Query: 248  RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +LL  M+      + FT+N L++ +  +GK+ +  +L   M ++G   D  +YN + NG 
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660

Query: 308  CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
             K     E+  + +E+   G+ P    Y TL +G+  +   + A KL  EM+     +  
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 1720

Query: 368  CTYRTFIDGL 377
                  + GL
Sbjct: 1721 VAESAMVRGL 1730



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 180/417 (43%), Gaps = 44/417 (10%)

Query: 1    MRHMHPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
            +  +H  P  V S  +N LL    K+ +    ++LF ++    + PD YTYS L+   C+
Sbjct: 1392 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 1451

Query: 59   MGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
             G+      +FG  + R    PN V +T L+ GL        A   F ++   G  P+ +
Sbjct: 1452 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 1511

Query: 118  TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
             +N +I+   R G  + A + F  M       GV   PN  TY+I++ G  K+  + +  
Sbjct: 1512 AFNAIIDSCSRRGQMMKANDFFSTMR----WWGVC--PNLATYNILLHGFSKKQALLRYL 1565

Query: 178  ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
             L+  M  E + P+ +T+ SLI G   +   +    LL +M+ +G   +  + N+++N+ 
Sbjct: 1566 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 1625

Query: 238  CKNGKMDNASRLLDLMVQCDVRPNAFTYN------------------------------- 266
             ++GKM  A  L++ M    V P+  TYN                               
Sbjct: 1626 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 1685

Query: 267  ----TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
                TL++G C  G I    +L   ME++G    + + + ++ G     + E+A+ + + 
Sbjct: 1686 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 1745

Query: 323  LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            +    + PT+ T+ TL H      +   ALKL   M+   +  D   Y   I G+C 
Sbjct: 1746 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCA 1802



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 6/351 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN ++   ++          F  +   G+ P+L TY+IL++ F K   +     +
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  ++R    P+ +TF SLI GL           L  K+   G   +  T+N LIN    
Sbjct: 1568 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            +G    A +L   M      +GV   P+  TY+ I +GL K+    ++  +  +M    +
Sbjct: 1628 SGKMRKAFDLVNFMNT----LGVF--PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV 1681

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P    Y +LI+G C   D   A  L  EM   G   + V+ + ++  L   GK ++A  
Sbjct: 1682 IPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAML 1741

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +LD M++  + P   T+ TLM  FC   KI    +L   ME  G K D  +YN+LI G C
Sbjct: 1742 VLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMC 1801

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
             N +   A  LY E+  + + P + TY  L   +       +  KL  ++Q
Sbjct: 1802 ANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 1852



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 6/320 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++++NILL   +K +     LSL+  +   G+FPD  T+  LI    K G   LG  +
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             G+++      +  TF  LI       ++ +A  L   +   G  P+  TYN + NGL +
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +  +  EM     E GV+  P    Y  +I+G+C+ G +  A +L  +M+    
Sbjct: 1663 KSAFRESTVVLHEML----ENGVI--PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              + V  ++++ G  H     +A  +L  M+   + P + +   +M+  C++ K+  A +
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  +M  C ++ +   YN L+ G C  G      EL+  M       +  +Y +L++   
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836

Query: 309  KNKEVEEALSLYNELPFKGI 328
                + +   L  +L  +G+
Sbjct: 1837 AANNLIQGEKLLTDLQERGL 1856



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 19/148 (12%)

Query: 237  LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            L K    D+A  +L  + Q  +   +  +  LMD + L   I  V               
Sbjct: 873  LVKARMYDSAKSILRHLCQMGIGSKSI-FGALMDTYPLCNSIPSV--------------- 916

Query: 297  DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
               +++LI  Y K   ++ A+  +  +   G KP+V T N +   + + ++ E    LF 
Sbjct: 917  ---FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR 973

Query: 357  EMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            EM    +  +  T+   I+GLCV   ++
Sbjct: 974  EMSDKGICPNVGTFNILINGLCVEGNLK 1001


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M+ M  S   P + ++N +L    K   +   + L   + S G+  D+ TY++LI+  C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             +++ G+++   + +    PN VT+ +LI G   E +++ A+ L  ++ +FG  PN +T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 119 YNTLINGLCRTGHTIVALNLF-----KEMTNGNGEIGVVF-------------------K 154
           +N LI+G    G+   AL +F     K +T      GV+                    K
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 155 PNTV-----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            N V     TY+ +IDGLCK GF+D+A  L  +M  + ++P++VTY++LI+GFC    + 
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            AK ++  +   G+ PN +  + ++   C+ G +  A R+ + M+      + FT+N L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
              C  GK+   +E    M S G   +  S++ LINGY  + E  +A S+++E+   G  
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 330 PTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           PT  TY +L  GL +   +R+AE+ LK    +     A DT  Y T +  +C
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLK---SLHAVPAAVDTVMYNTLLTAMC 624



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FNIL+  L     ++    L +++   G  P + TY+ +++ +CK G+      +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       +V T+  LI  LC  +RI +   L   ++     PN +TYNTLING   
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  ++A  L  EM      +     PN VT++ +IDG   EG   +A ++F  M+ + L
Sbjct: 311 EGKVLIASQLLNEM------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V+Y  L+ G C   +++ A+G  + M   GV    ++   +++ LCKNG +D A  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME------------------- 289
           LL+ M +  + P+  TY+ L++GFC  G+    KE+   +                    
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 290 SMGC----------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            MGC                  D F++N+L+   CK  +V EA      +   GI P  V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +++ L +G     +  +A  +F EM          TY + + GLC    +R
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +LG + K+    +V S  K +    + PD+ T++ILIN  C  G       +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +S +AP +VT+ +++   C + R   A  L   +K+ G + +V TYN LI+ LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +        L ++M         +  PN VTY+ +I+G   EG V  A +L  +M    L
Sbjct: 276 SNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN VT+ +LI G     ++ EA  +   M  +G+ P+ VS  V+++ LCKN + D A  
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  V     TY  ++DG C  G ++    L   M   G   D  +Y+ LING+C
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + A  +   +   G+ P  + Y+TL +    +   + A++++  M       D  
Sbjct: 450 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509

Query: 369 TYRTFIDGLCVRPQV 383
           T+   +  LC   +V
Sbjct: 510 TFNVLVTSLCKAGKV 524



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 177/367 (48%), Gaps = 6/367 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S ++IL+    +       L +F+ +   G  P +YT + ++    K G+    +     
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +L+    P+V TF  LI  LCAE    +++ L  K++  G  P ++TYNT+++  C+ G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+ L   M +           +  TY+++I  LC+   + K   L   M+   ++PN
Sbjct: 244 FKAAIELLDHMKSKG------VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTY +LI+GF +      A  LL EM+  G+ PN V+ N +++     G    A ++  
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M    + P+  +Y  L+DG C   + +  +  ++ M+  G      +Y  +I+G CKN 
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            ++EA+ L NE+   GI P +VTY+ L +G  ++ + + A ++   +    ++ +   Y 
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 372 TFIDGLC 378
           T I   C
Sbjct: 478 TLIYNCC 484



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 188/417 (45%), Gaps = 31/417 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L ++        L + +    + P+  TY+ LIN F   G+V +   +  
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L    +PN VTF +LI G  +E    EA  +F  ++A G  P+ ++Y  L++GLC+  
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 382

Query: 131 HTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVTYS 161
              +A   +  M                     NG  +  VV           P+ VTYS
Sbjct: 383 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I+G CK G    AKE+  ++    L+PN + Y++LI+  C      EA  +   M+ +
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G   +  + NV++  LCK GK+  A   +  M    + PN  +++ L++G+  +G+  + 
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  M  +G     F+Y  L+ G CK   + EA      L         V YNTL   
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ--VRFTYARRKGNSGN 396
           + +     +A+ LF EM    +  D+ TY + I GLC + +  +   +A+     GN
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)

Query: 68  IFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +FG ++   R C   N   +  LI+    E  I ++  +F  +  +G  P+V T N ++ 
Sbjct: 108 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 166

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            + ++G  +   +  KEM            P+  T++I+I+ LC EG  +K+  L  +M+
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRK------ICPDVATFNILINVLCAEGSFEKSSYLMQKME 220

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P +VTY +++H +C    +  A  LL  M  +GV  +V + N+++++LC++ ++ 
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               LL  M +  + PN  TYNTL++GF   GK+    +L   M S G   +  ++N LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+      +EAL ++  +  KG+ P+ V+Y  L  GL +  + + A   ++ M+ N V 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 365 ADTCTYRTFIDGLC 378
               TY   IDGLC
Sbjct: 401 VGRITYTGMIDGLC 414



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 65/432 (15%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L KN   D  + L   ++  G+ PD+ TYS LIN FCK+G+      I  RI R   +PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 81  VV-----------------------------------TFTSLIKGLCAESRIVEAAALFT 105
            +                                   TF  L+  LC   ++ EA     
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNG 147
            + + G  PN ++++ LING   +G  + A ++F EMT                     G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592

Query: 148 EI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +            V    +TV Y+ ++  +CK G + KA  LF +M   ++ P+  TYT
Sbjct: 593 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           SLI G C       A     E   +G V PN V     ++ + K G+        + M  
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
               P+  T N ++DG+   GKI +  +L   M +     +  +YNIL++GY K K+V  
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +  LY  +   GI P  +T ++L  G+ E    E  LK+        V  D  T+   I 
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 832

Query: 376 GLCVRPQVRFTY 387
             C   ++ + +
Sbjct: 833 KCCANGEINWAF 844



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L K  H        K L+++    D   Y+ L+   CK G ++    +
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
           FG +++    P+  T+TSLI GLC + + V A     + +A G   PN + Y   ++G+ 
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     +   ++M N      +   P+ VT + +IDG  + G ++K  +L  +M  +N
Sbjct: 696 KAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+ TY  L+HG+    D + +  L   ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L   +   V  + +T+N L+   C  G+IN   +L   M S+G   D  + + +++  
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            +N   +E+  + +E+  +GI P    Y  L +GL  +   + A  +  EM  + +
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 21/337 (6%)

Query: 44   PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
            P+L TY+IL++ + K   VS  F+++  I+ +   P+ +T  SL+ G+C ES ++E    
Sbjct: 752  PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 808

Query: 104  FTKLKAF---GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
               LKAF   G E +  T+N LI+  C  G    A +L K MT+    +G+    +T   
Sbjct: 809  LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTC-- 862

Query: 161  SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
              ++  L +     +++ +  +M  + ++P    Y  LI+G C   D   A  +  EM+ 
Sbjct: 863  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922

Query: 221  QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
              + P  V+ + ++  L K GK D A+ LL  M++  + P   ++ TLM   C  G +  
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982

Query: 281  VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              EL V M + G K D  SYN+LI G C   ++  A  LY E+   G      TY  L  
Sbjct: 983  ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042

Query: 341  GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL     A           G D+       R FI  +
Sbjct: 1043 GLLARETA---------FSGADIILKDLLARGFITSM 1070



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++SF  L+    KN +    L L   +++ GL  DL +Y++LI   C  G ++L F +
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
            +  +    F  N  T+ +LI+GL A       A +  K
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+    +   +     L + + +   FP L TY+ L+   CK  QV+   + F  +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+S F P++V+F SL+ G C    I EA  LF +LK     P VITYNTLI+GLC  G+ 
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L KEMT+          P+  TY+I+++G  K G+V  A+  F +M  + L P+ 
Sbjct: 407 DAALRLKKEMTDQG------LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y + I G     D + A  +  EM+  G  P+V++ NV ++ LC+ G  + A  LL+ 
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV   + P+  TY ++++GF   G + + +E+F  M S G      +Y +LI+ +   + 
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A   ++++  K +   V+TYN + +GL   R+ + A K F EM+   +  +  +Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 373 FIDGLC 378
            I+  C
Sbjct: 641 LINESC 646



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 186/414 (44%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L    K    D  L L   +   G +P+  TY++L+N   K G++     +
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L S    +  T+  LI G C +   VEA  L  ++      P + TYNTL+ GLC+
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                     F +M          F P+ V+++ ++ G C+ G + +A  LF ++K  +L
Sbjct: 333 WVQVTGVRLRFSDMLKSK------FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDL 386

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V+TY +LIHG C     + A  L  EM DQG+ P++ +  +++N   K G +  A  
Sbjct: 387 VPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARG 446

Query: 249 LLDLMVQCDVRPNAFTYNT---------------------LMDGF--------------C 273
             + M+   ++P+ F YNT                     L  GF              C
Sbjct: 447 FFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALC 506

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G      +L  +M S G   D  +Y  +ING+ KN  + +A  ++NE+  KG+ P+VV
Sbjct: 507 QQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV 566

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           TY  L H     +  + A   F +M    V A+  TY   I+GLC+  ++   Y
Sbjct: 567 TYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 8/377 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L          +++  +   G+ P + TY+ +++ +CK G+V     +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +  R C+ PN VT+  L+ GL  +  + +A  L  ++   G   +  TYN LING C
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G  + A +L +EM N          P   TY+ ++ GLCK   V   +  F  M    
Sbjct: 297 QKGLFVEAFDLVEEMVNRRA------FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P++V++ SL++G+C     +EA  L  E+  + + P V++ N +++ LC  G +D A 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL   M    + P+ FTY  L++G    G ++  +  F  M S G K D F+YN  I G 
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +   A S+  E+   G  P V+TYN   H L +    E A  L   M  + +  D 
Sbjct: 471 MKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDH 530

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY + I+G      +R
Sbjct: 531 VTYTSIINGFVKNGHLR 547



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 12/351 (3%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           L +F ++   GL PD+   + ++        +S    ++G + +    P VVT+ +++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
            C E R+ +A  L ++++  GC PN +TYN L+NGL + G    A  L +EM N    + 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV- 283

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
                +  TY+ +I+G C++G   +A +L  +M      P + TY +L++G C    W +
Sbjct: 284 -----SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC---KWVQ 335

Query: 211 AKGLLI---EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
             G+ +   +M+     P++VS N ++   C+ G +  A  L D +   D+ P   TYNT
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C+ G ++    L   M   G   D F+Y IL+NG  K   V  A   +NE+  KG
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +KP    YNT   G  +I     A  +  EM       D  TY  F+  LC
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALC 506



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 29/363 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S++N L+  L K      V   F  +      PD+ +++ L+  +C+ G +S  F++
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      P V+T+ +LI GLC    +  A  L  ++   G  P++ TY  L+NG  +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 129 TGHTIVALNLFKEM-------------TNGNGEIGVV----------------FKPNTVT 159
            G+  +A   F EM             T   GE+ +                 F P+ +T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++ +  LC++G  ++A +L   M  + L P+ VTYTS+I+GF       +A+ +  EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +GV P+VV+  V+++       +D A      M++  V  N  TYN +++G C+T +++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              + F  ME  G   + FSY ILIN  C     EEAL LY E+  + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 340 HGL 342
             L
Sbjct: 678 KNL 680



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 162/309 (52%), Gaps = 12/309 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L    + D  L L K +   GLFPD++TY+IL+N   K+G VS+    
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT---KLKAFGCEPNVITYNTLING 125
           F  +L     P+   + + I G   E +I + +  F+   ++ A G  P+VITYN  ++ 
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G+   A +L + M +     G++  P+ VTY+ II+G  K G + KA+E+F +M  
Sbjct: 505 LCQQGNFEEACDLLENMVSD----GLI--PDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + + P+VVTYT LIH        + A     +M+++ V  NV++ N I+N LC   +MD 
Sbjct: 559 KGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDE 618

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A +  D M +  + PN F+Y  L++  C  G       L+  M     + D F++++ + 
Sbjct: 619 AYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678

Query: 306 GYCKNKEVE 314
              ++ +V 
Sbjct: 679 NLHRDYQVH 687



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 8/220 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++N+ +  L +  +++    L + + S GL PD  TY+ +IN F K G +     
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +L    AP+VVT+T LI    A+  +  A   F+K+       NVITYN +INGLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            T     A   F EM     E G++  PN  +Y+I+I+  C  G+ ++A  L+ +M    
Sbjct: 612 MTRRMDEAYKYFDEME----EKGIL--PNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           + P+  T++  +       D+       +E + Q V+ N+
Sbjct: 666 IQPDSFTHSVFLKNL--HRDYQVHAVQCVESLIQNVEDNI 703



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%)

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           +M+  G+ P+V + N I+  L     +  A  +  +M Q  ++P   TYNT++D +C  G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++++  EL   M+  GC  +D +YN+L+NG  K  E+E+A  L  E+   G+  +  TYN
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYN 289

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            L +G  +      A  L  EM          TY T + GLC   QV
Sbjct: 290 PLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 184/373 (49%), Gaps = 41/373 (10%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P++  Y+ +I  +CK+G +   +++F  +    F P + TF ++I G C E   V +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294

Query: 101 AALFTKLKAFG-----------------------------------CEPNVITYNTLING 125
             L +++K  G                                   C+P+V TYN LIN 
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+ G   VA+    E +      G++  PN ++Y+ +I   CK    D A +L LQM  
Sbjct: 355 LCKEGKKEVAVGFLDEASKK----GLI--PNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               P++VTY  LIHG   +   ++A  + ++++D+GV P+    N++M+ LCK G+   
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M+  ++ P+A+ Y TL+DGF  +G  +  +++F      G K D   +N +I 
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C++  ++EAL+  N +  + + P   TY+T+  G  + +    A+K+F  M+ N    
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588

Query: 366 DTCTYRTFIDGLC 378
           +  TY + I+G C
Sbjct: 589 NVVTYTSLINGFC 601



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 180/356 (50%), Gaps = 7/356 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD+ TY+ILIN  CK G+  +         +    PN +++  LI+  C       A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             ++   GC+P+++TY  LI+GL  +GH   A+N+  ++ +     GV   P+   Y+++
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR----GV--SPDAAIYNML 456

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + GLCK G    AK LF +M   N+ P+   Y +LI GF  + D++EA+ +    V++GV
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           + +VV  N ++   C++G +D A   ++ M +  + P+ FTY+T++DG+     +    +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +F  ME   CK +  +Y  LING+C   + + A   + E+  + + P VVTY TL   L 
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636

Query: 344 -EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTN 398
            E    E+A+  +  M  N    +  T+   + G   +   +        N G ++
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 21/349 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ IL+  L  + H D  +++  +L   G+ PD   Y++L++  CK G+     ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L     P+   + +LI G        EA  +F+     G + +V+ +N +I G CR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    AL     M   +        P+  TYS IIDG  K+  +  A ++F  M+    
Sbjct: 533 SGMLDEALACMNRMNEEH------LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK-MDNAS 247
            PNVVTYTSLI+GFC   D+  A+    EM  + + PNVV+   ++  L K    ++ A 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFC--LTGKI------------NRVKELFVSMESMGC 293
              +LM+     PN  T+N L+ GF    +GK+            +   E F  M+S G 
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
                +YN  +   C +  V+ A    +++  KG  P  V++  + HG 
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 22/356 (6%)

Query: 27  YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
           YD V+ L+  +      PD+   + L++   K  ++     ++  +     + +  +   
Sbjct: 157 YDYVVELYDSV------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L+KG+C E ++     L       GC PN++ YNT+I G C+ G    A  +FKE+    
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI-----HG 201
                 F P   T+  +I+G CKEG    +  L  ++K   L  +V    ++I     HG
Sbjct: 271 ------FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           +    D  E+ G +I       +P+V + N+++N LCK GK + A   LD   +  + PN
Sbjct: 325 Y--KVDPAESIGWIIA---NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             +Y  L+  +C + + +   +L + M   GCK D  +Y ILI+G   +  +++A+++  
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L  +G+ P    YN L  GL +  +   A  LF EM   ++  D   Y T IDG 
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 126/318 (39%), Gaps = 56/318 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + +N+L+  L K   +     LF  +    + PD Y Y+ LI+ F + G       +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F   +      +VV   ++IKG C    + EA A   ++      P+  TY+T+I+G  +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ +F+ M           KPN VTY+ +I+G C +G    A+E F +M+  +L
Sbjct: 568 QQDMATAIKIFRYMEKNKC------KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNE----------- 236
            PNVVTYT+LI      +   E      E M+     PN V+ N ++             
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681

Query: 237 --------------------------------------LCKNGKMDNASRLLDLMVQCDV 258
                                                 LC +G +  A    D MV+   
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741

Query: 259 RPNAFTYNTLMDGFCLTG 276
            P+  ++  ++ GFC+ G
Sbjct: 742 SPDPVSFAAILHGFCVVG 759



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 6/266 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P+VI  N+L++ L ++     A  ++ EM +    +      +  +  I++ G+C EG V
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSV------DNYSTCILVKGMCNEGKV 221

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +  ++L      +   PN+V Y ++I G+C   D   A  +  E+  +G  P + +   +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +N  CK G    + RLL  + +  +R + +  N ++D     G      E    + +  C
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
           K D  +YNILIN  CK  + E A+   +E   KG+ P  ++Y  L     + ++ + A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
           L ++M       D  TY   I GL V
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVV 427



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 15/259 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ ++    K +   T + +F+ +      P++ TY+ LIN FC  G   +    
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
           F  +      PNVVT+T+LI+ L  ES  +E A  + +L     C PN +T+N L+ G  
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672

Query: 128 -RTGHTIVA---------LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            +T   ++A          +LF E  +     G  +  +   Y+  +  LC  G V  A 
Sbjct: 673 KKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG--WSDHAAAYNSALVCLCVHGMVKTAC 730

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL-LIEMVDQGVQPNVVSSNVIMNE 236
               +M  +  +P+ V++ +++HGFC   +  + + +    + ++G++  V  S V+   
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQH 790

Query: 237 LCKNGKMDNASRLLDLMVQ 255
           L     +  AS +L  MV+
Sbjct: 791 L-PQPVICEASTILHAMVE 808



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 13/183 (7%)

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ-- 224
           L +    ++ +++   ++ EN+       + ++H +  +   ++A    +E+ D  V+  
Sbjct: 109 LARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKA----VEIYDYVVELY 164

Query: 225 ---PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT--LMDGFCLTGKIN 279
              P+V++ N +++ L K+ ++ +A ++ D M  CD   +   Y+T  L+ G C  GK+ 
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEM--CDRGDSVDNYSTCILVKGMCNEGKVE 222

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             ++L       GC  +   YN +I GYCK  ++E A  ++ EL  KG  PT+ T+ T+ 
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282

Query: 340 HGL 342
           +G 
Sbjct: 283 NGF 285



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 1/172 (0%)

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYN 266
           +NE + +L  + ++ V+    + + +++   ++G +  A  + D +V+  D  P+    N
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           +L+     + ++   ++++  M   G   D++S  IL+ G C   +VE    L      K
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK 234

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  P +V YNT+  G  ++   E A  +F E++         T+ T I+G C
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 196/378 (51%), Gaps = 7/378 (1%)

Query: 7   SPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           +P P + S+N+++  L K       + LF  +    + P+  TY+ +I+   K G +  G
Sbjct: 183 APAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESG 242

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F ++ ++LR    PNV+T+  L+ GLC   R+ E AA+  ++ +    P+  TY+ L +G
Sbjct: 243 FRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDG 302

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             RTG +   L+LF+E      +IG        T SI+++GLCK+G + KA+E+   +  
Sbjct: 303 HSRTGDSQTMLSLFEESVKKGVKIG------AYTCSILLNGLCKDGKISKAEEVLQTLVN 356

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L    V Y +LI+G+C   D   A  +  +M  + ++P+ ++ N ++N L K  ++  
Sbjct: 357 SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L+  M +  V P+  T+NTL+D +   G++ +   +   M+  G K +  SY  ++N
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
            +CKN ++ EA+++ +++  K + P    YN +     E    ++A  L  +M+ + V  
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536

Query: 366 DTCTYRTFIDGLCVRPQV 383
              TY   I GLC + Q+
Sbjct: 537 SIVTYNLLIKGLCKQSQI 554



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N+LL  L +        ++   + S  + PD +TYSIL +   + G    
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQT 311

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F   ++        T + L+ GLC + +I +A  +   L   G     + YNTLIN
Sbjct: 312 MLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLIN 371

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C+ G    A ++F++M +       + +P+ +TY+ +I+GL K   + +A +L ++M+
Sbjct: 372 GYCQIGDLEGAFSIFQQMKS------RLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              +NP+V T+ +LI  +  A    +   +L +M ++G++PNVVS   I+N  CKNGK+ 
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  +LD M   DV P A  YN ++D +   G  ++   L   M+S G      +YN+LI
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G CK  ++ EA  L + L   G+ P V++YNTL          +RAL+L  EM    + 
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 365 ADTCTYRTFIDGL 377
               TYR     L
Sbjct: 606 PSPRTYRMLFSSL 618



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 174/368 (47%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL    ++     T+LSLF+     G+    YT SIL+N  CK G++S    +
Sbjct: 291 PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++ S      V + +LI G C    +  A ++F ++K+    P+ ITYN LINGL +
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM   NG       P+  T++ +ID   + G ++K   +   M+ + L
Sbjct: 411 VERITEAHDLVIEMEK-NG-----VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGL 464

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y S+++ FC      EA  +L +M  + V P     N I++   + G  D A  
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M    V P+  TYN L+ G C   +I+  +EL  S+ + G   D  SYN LI+  C
Sbjct: 525 LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                + AL L  E+   GIKP+  TY  LF  L    +      L+ +M   DV   + 
Sbjct: 585 YRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG 644

Query: 369 TYRTFIDG 376
            Y   +D 
Sbjct: 645 IYNIMVDA 652



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 8/355 (2%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVT 83
           +H D V   F+ L +    PD +T++  +      G +     +  R+      APN  +
Sbjct: 132 RHAD-VRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           +  +I GL       +A  LF ++      PN ITYNT+I+G  + G       L+ +M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                     KPN +TY++++ GLC+ G + +   +  +M    + P+  TY+ L  G  
Sbjct: 251 RHG------LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              D      L  E V +GV+    + ++++N LCK+GK+  A  +L  +V   +     
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            YNTL++G+C  G +     +F  M+S   + D  +YN LING  K + + EA  L  E+
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              G+ P+V T+NTL        Q E+   +  +MQ   +  +  +Y + ++  C
Sbjct: 425 EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFC 479



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 6/358 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +ILL  L K+        + + L + GL      Y+ LIN +C++G +   F IF ++  
Sbjct: 332 SILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS 391

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+ +T+ +LI GL    RI EA  L  +++  G  P+V T+NTLI+   R G    
Sbjct: 392 RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEK 451

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
              +  +M           KPN V+Y  I++  CK G + +A  +   M  +++ P    
Sbjct: 452 CFIILSDMQEKG------LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y ++I  +      ++A  L  +M   GV P++V+ N+++  LCK  ++  A  LLD + 
Sbjct: 506 YNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLR 565

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
              + P+  +YNTL+   C     +R  EL   M   G K    +Y +L +       V 
Sbjct: 566 NYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVH 625

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           E  +LY ++  K + P    YN +     +  +  +   L  EM    +A    T  T
Sbjct: 626 EMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 58/143 (40%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP + ++N+L+  L K         L   L + GL PD+ +Y+ LI+  C          
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +    P+  T+  L   L    R+ E   L+ ++      P    YN +++   
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654

Query: 128 RTGHTIVALNLFKEMTNGNGEIG 150
           + G       L KEM++    +G
Sbjct: 655 KCGEESKVEALRKEMSDKGIAVG 677


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 201/440 (45%), Gaps = 64/440 (14%)

Query: 2   RHMHPSPP--PVSSFNILLGCLAKNKHYDTVLSLFKRLNS-------------------- 39
           R + PS P  P+   N LL  LA+++ +  + SL  R+ +                    
Sbjct: 30  RVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIP 89

Query: 40  -----------IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSL 87
                       GL PD Y Y+  +  +C+ G ++    +F  + LR C      T+T+L
Sbjct: 90  AAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTAL 148

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT--------------- 132
           + GL     + EA A+F  ++A  C P+   Y T+++GLC  G T               
Sbjct: 149 LHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 133 ---IVALNLFKEMTNGNGEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKE 178
              IV  N   +     GE+    K           PN  TY+ +I GLCK G V++A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF +M    L PNVVTYT+LI G C+      A  LL  M   G+ PN  + +V+++ LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K++ A   L  +V+  V+ N   Y +L+DG C TGKI+   EL   M S G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ LI+G C+ K++ +A  +  ++  KGI+ + VTY  +   L     +E   K+F +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               +  D  TY  F+   C
Sbjct: 449 IATGINPDIVTYTVFVRSYC 468



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  LL  L         +++F  + +    PD + Y+ +++  C+ G+     V+    
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + + F PN+V + +LI G C    +  A  +F  +    C PNV TY  LI+GLC++G  
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ LF  M           +PN VTY+ +I G C EG +  A  L   M+   L PN 
Sbjct: 264 ERAMVLFSRMVEAG------LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T++ LI   C      EA+  L  +V +GV+ N V    +++ LCK GK+D A  L+  
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+     P+A +Y++L+DG C   K+++   +   M   G +    +Y I+I+   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            E    +++++   GI P +VTY        E  + E A  + V+M    V  +  TY T
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 373 FIDG 376
            I G
Sbjct: 498 LIRG 501



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 181/367 (49%), Gaps = 8/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+         +  L +F+ ++     P++ TY+ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++ +   PNVVT+T+LI+G C E  +  A  L   ++  G  PN  T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +    LF       G      K N V Y+ +IDGLCK G +D A EL  +M  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +Y+SLI G C     ++A  +L +M+++G+Q + V+  +I++EL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+   + P+  TY   +  +C  G++   + + V M   G   +  +YN LI GY 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF--VEMQGNDVAAD 366
               V +A S +  +  KG KP   +Y  L   + +   ++ ++ ++   +M+   V  +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 367 TCTYRTF 373
             T R  
Sbjct: 564 DITERQL 570



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 179/382 (46%), Gaps = 18/382 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+       H      L   + + GL P+ +T+S+LI+  CK  +V    + 
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +++     N V +TSLI GLC   +I  A  L  K+ + G  P+  +Y++LI+GLCR
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + ++M     E G+   P  VTY+IIID L +E   +  K++F +M    +
Sbjct: 400 QKKLSQATLMLEDMM----EKGIQASP--VTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP++VTYT  +  +C      +A+ ++++MVD+GV PN+V+ N ++      G +  A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 249 LLDLMVQCDVRPNAFTYNTLM---------DGFCLTGKINRVKELFVSMESMGCKHDDFS 299
             ++MV    +PN  +Y  L+         D      KI  +K+L V +E +  +    +
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 300 ---YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              Y+  I   C+   +EEA   +  +    + P+   Y ++      ++    AL L  
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 357 EMQGNDVAADTCTYRTFIDGLC 378
            M  +       +YR  I  LC
Sbjct: 634 SMTKSGYLPHLESYRIIISSLC 655



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 10/306 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P +    +L+  L       +  +L +++ A     N+ TY TLIN  C  G    A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPA----RNLRTYTTLINAYCLAGDIPAAKQH 94

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
              + +          P++  Y+  + G C+ G +  A  +F+ M          TYT+L
Sbjct: 95  LTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTAL 148

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +HG   A    EA  + + M      P+      +++ LC+ G+ + A  LL+  +    
Sbjct: 149 LHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN   YN L+DG+C  G++    ++F  M+   C  +  +Y  LI+G CK+ +VE A+ 
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L++ +   G++P VVTY  L  G       + A +L   M+ N +  +  T+   ID LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 379 VRPQVR 384
            R +V 
Sbjct: 329 KREKVE 334



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 53/365 (14%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV------ 67
           +  L+  L K    D    L +++ S G  PD ++YS LI+  C+  ++S   +      
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 68  -----------------------------IFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                                        IF +++ +   P++VT+T  ++  C E R+ 
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A ++  ++   G  PN++TYNTLI G    G    A + F+ M      +G  +KPN  
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM------VGKGWKPNED 528

Query: 159 TYSIIIDGLCKEGFVDKAKELF-------LQMKYENLNPNVV-----TYTSLIHGFCHAN 206
           +Y++++  + K+   D + +++       LQ+  E++    +      Y+  I   C  +
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              EAK   + M +  + P+      I++  C+   + +A  LLD M +    P+  +Y 
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYR 648

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            ++   C  G     KE+F  +      +D+  + ILI G  +   V E  SL + +   
Sbjct: 649 IIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 708

Query: 327 GIKPT 331
           G +P+
Sbjct: 709 GYQPS 713



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 109/287 (37%), Gaps = 53/287 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ + +    +    +   S+  ++   G+FP+L TY+ LI  +  +G VS  F  
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 69  FGRILRSCFAPNVVTFTSL----------------------------------------- 87
           F  ++   + PN  ++T L                                         
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAA 574

Query: 88  ------IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
                 I+ LC   R+ EA   F  ++     P+   Y ++I+  CR      AL L   
Sbjct: 575 DIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDS 634

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           MT         + P+  +Y III  LC+ G    AKE+F  +  +  N + + +  LI+G
Sbjct: 635 MTKSG------YLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYG 688

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                   E   LL  M + G QP+   + +I  E+    ++   +R
Sbjct: 689 LLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 735



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%)

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N+ +   ++N  C  G +  A + L  ++   + P+++ Y + + G+C  G +     +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           V M   GC    F+Y  L++G      V EA++++  +      P    Y T+ HGL E 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
            + E A  L  E   N    +   Y   IDG C   ++       +G  GN
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/123 (19%), Positives = 51/123 (41%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P     ++  + CL +    +     F  + +  L P    Y+ +I+C C++  ++    
Sbjct: 571 PLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALT 630

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +S + P++ ++  +I  LC       A  +F  L       + I +  LI GL 
Sbjct: 631 LLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLL 690

Query: 128 RTG 130
           + G
Sbjct: 691 QKG 693


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 180/349 (51%), Gaps = 6/349 (1%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L  +  +   G  P++YT+++L+N  CK G+V    +IF  I ++   P  V+F +LI 
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C    + E   L   ++ F   P+V TY+ LI+GLC+      A +LFKEM +     
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR---- 331

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+V  PN VT++ +I+G CK G VD A E++ QM  + L  ++V Y +LI G C    + 
Sbjct: 332 GLV--PNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFR 389

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA+  + EM  +G+ P+  +   +++  CK G ++ A  +   MV+  ++ +   +  ++
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G C  GKI   +     M   G K DD +Y ++++G+CK  +V+    L  E+   G  
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI 509

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P V+TYN L +GL +  Q + A  L   M    V  D  TY   + G C
Sbjct: 510 PGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC 558



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 188/371 (50%), Gaps = 46/371 (12%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN+L+  L K         +F  +   GL P   +++ LIN +CK G +  GF 
Sbjct: 229 PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFR 288

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +      P+V T+++LI GLC E ++ +A  LF ++   G  PN +T+ TLING C
Sbjct: 289 LKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQC 348

Query: 128 RTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           + G   +AL ++++M T G        K + V Y+ +IDGLCK G+  +A++   +M   
Sbjct: 349 KNGRVDLALEIYQQMFTKG-------LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+  TYT+L+ G C   D   A  +  EMV +G+Q + V+   I++ LC++GK+ +A
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-------------- 292
            R L  M++  ++P+  TY  +MDGFC  G +    +L   M+S G              
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNG 521

Query: 293 -CKH--------------------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            CK                     DD +YNIL+ G+CK+ ++ +  ++  E+   G+   
Sbjct: 522 LCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSD 578

Query: 332 VVTYNTLFHGL 342
             +Y +L H L
Sbjct: 579 YASYRSLLHEL 589



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 172/333 (51%), Gaps = 6/333 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+    KM    +    +  IL S + PNV TF  L+  LC E ++ +A  +F +++  G
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
            +P  +++NTLING C++G+      L   M     E   VF P+  TYS +IDGLCKE 
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKMVM-----EEFRVF-PDVFTYSALIDGLCKEC 316

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            ++ A  LF +M    L PN VT+T+LI+G C     + A  +  +M  +G++ ++V  N
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            +++ LCK G    A + +  M +  + P+ FTY TL+DG C  G +    E+   M   
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D+ ++  +I+G C++ ++ +A     E+   G+KP   TY  +  G  +    +  
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            KL  EMQ +       TY   ++GLC + QV+
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 12/354 (3%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           L + G     + +  L++ + + G VS     F    +            L++ +   S 
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
            + A   + ++   G  PNV T+N L+N LC+ G    A  +F E+           +P 
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG------LQPT 266

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            V+++ +I+G CK G +++   L + M+   + P+V TY++LI G C      +A  L  
Sbjct: 267 AVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFK 326

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM D+G+ PN V+   ++N  CKNG++D A  +   M    ++ +   YNTL+DG C  G
Sbjct: 327 EMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGG 386

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
                ++    M   G   D F+Y  L++G CK  ++E AL +  E+  +GI+   V + 
Sbjct: 387 YFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFT 446

Query: 337 TLFHGL---FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            +  GL    +I  AER L+   EM    +  D  TY   +DG C +  V+  +
Sbjct: 447 AIISGLCRDGKIVDAERTLR---EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGF 497



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 23/363 (6%)

Query: 29  TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
           ++LS F  L+S   +P   T+S  +  +C M    + F+I  R+ +   A +++ F    
Sbjct: 92  SLLSFFDFLSS---YP---TFSHTVQSYCSM----VHFLIAHRMNQQ--AESLLHFVVSR 139

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           KG  + S +  A+ L TK    G   +   ++ L++     G+   A+  F+     N +
Sbjct: 140 KGKGSASSVF-ASILETK----GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLK 194

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
           I             +++ + K      A E +L++      PNV T+  L++  C     
Sbjct: 195 IPFN------GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKV 248

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            +A+ +  E+   G+QP  VS N ++N  CK+G ++   RL  +M +  V P+ FTY+ L
Sbjct: 249 KDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSAL 308

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG C   ++     LF  M   G   +D ++  LING CKN  V+ AL +Y ++  KG+
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           K  +V YNTL  GL +      A K   EM    +  D  TY T +DG C    +     
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE 428

Query: 389 RRK 391
            RK
Sbjct: 429 MRK 431


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 1   MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           M+ M  S   P + ++N +L    K   +   + L   + S G+  D+ TY++LI+  C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
             +++ G+++   + +    PN VT+ +LI G   E +++ A+ L  ++ +FG  PN +T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 119 YNTLINGLCRTGHTIVALNLF-----KEMTNGNGEIGVVF-------------------K 154
           +N LI+G    G+   AL +F     K +T      GV+                    K
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 155 PNTV-----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
            N V     TY+ +IDGLCK GF+D+A  L  +M  + ++P++VTY++LI+GFC    + 
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            AK ++  +   G+ PN +  + ++   C+ G +  A R+ + M+      + FT+N L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
              C  GK+   +E    M S G   +  S++ LINGY  + E  +A S+++E+   G  
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575

Query: 330 PTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           PT  TY +L  GL +   +R+AE+ LK    +     A DT  Y T +  +C
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLK---SLHAVPAAVDTVMYNTLLTAMC 624



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V++FNIL+  L     ++    L +++   G  P + TY+ +++ +CK G+      +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       +V T+  LI  LC  +RI +   L   ++     PN +TYNTLING   
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  ++A  L  EM      +     PN VT++ +IDG   EG   +A ++F  M+ + L
Sbjct: 311 EGKVLIASQLLNEM------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ V+Y  L+ G C   +++ A+G  + M   GV    ++   +++ LCKNG +D A  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME------------------- 289
           LL+ M +  + P+  TY+ L++GFC  G+    KE+   +                    
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 290 SMGC----------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            MGC                  D F++N+L+   CK  +V EA      +   GI P  V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +++ L +G     +  +A  +F EM          TY + + GLC    +R
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +LG + K+    +V S  K +    + PD+ T++ILIN  C  G       +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +S +AP +VT+ +++   C + R   A  L   +K+ G + +V TYN LI+ LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +        L ++M         +  PN VTY+ +I+G   EG V  A +L  +M    L
Sbjct: 276 SNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN VT+ +LI G     ++ EA  +   M  +G+ P+ VS  V+++ LCKN + D A  
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  V     TY  ++DG C  G ++    L   M   G   D  +Y+ LING+C
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 449

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    + A  +   +   G+ P  + Y+TL +    +   + A++++  M       D  
Sbjct: 450 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509

Query: 369 TYRTFIDGLCVRPQV 383
           T+   +  LC   +V
Sbjct: 510 TFNVLVTSLCKAGKV 524



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 179/367 (48%), Gaps = 6/367 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S ++IL+    +       L +F+ +   G  P +YT + ++    K G+    +     
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +L+    P+V TF  LI  LCAE    +++ L  K++  G  P ++TYNT+++  C+ G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A+ L   M +     GV    +  TY+++I  LC+   + K   L   M+   ++PN
Sbjct: 244 FKAAIELLDHMKSK----GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
            VTY +LI+GF +      A  LL EM+  G+ PN V+ N +++     G    A ++  
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           +M    + P+  +Y  L+DG C   + +  +  ++ M+  G      +Y  +I+G CKN 
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            ++EA+ L NE+   GI P +VTY+ L +G  ++ + + A ++   +    ++ +   Y 
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 372 TFIDGLC 378
           T I   C
Sbjct: 478 TLIYNCC 484



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 188/417 (45%), Gaps = 31/417 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N+L+  L ++        L + +    + P+  TY+ LIN F   G+V +   +  
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +L    +PN VTF +LI G  +E    EA  +F  ++A G  P+ ++Y  L++GLC+  
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 382

Query: 131 HTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVTYS 161
              +A   +  M                     NG  +  VV           P+ VTYS
Sbjct: 383 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I+G CK G    AKE+  ++    L+PN + Y++LI+  C      EA  +   M+ +
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G   +  + NV++  LCK GK+  A   +  M    + PN  +++ L++G+  +G+  + 
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +F  M  +G     F+Y  L+ G CK   + EA      L         V YNTL   
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ--VRFTYARRKGNSGN 396
           + +     +A+ LF EM    +  D+ TY + I GLC + +  +   +A+     GN
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)

Query: 68  IFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +FG ++   R C   N   +  LI+    E  I ++  +F  +  +G  P+V T N ++ 
Sbjct: 108 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 166

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            + ++G  +   +  KEM            P+  T++I+I+ LC EG  +K+  L  +M+
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRK------ICPDVATFNILINVLCAEGSFEKSSYLMQKME 220

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                P +VTY +++H +C    +  A  LL  M  +GV  +V + N+++++LC++ ++ 
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
               LL  M +  + PN  TYNTL++GF   GK+    +L   M S G   +  ++N LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+      +EAL ++  +  KG+ P+ V+Y  L  GL +  + + A   ++ M+ N V 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 365 ADTCTYRTFIDGLC 378
               TY   IDGLC
Sbjct: 401 VGRITYTGMIDGLC 414



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 65/432 (15%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L KN   D  + L   ++  G+ PD+ TYS LIN FCK+G+      I  RI R   +PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 81  VV-----------------------------------TFTSLIKGLCAESRIVEAAALFT 105
            +                                   TF  L+  LC   ++ EA     
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNG 147
            + + G  PN ++++ LING   +G  + A ++F EMT                     G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592

Query: 148 EI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            +            V    +TV Y+ ++  +CK G + KA  LF +M   ++ P+  TYT
Sbjct: 593 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           SLI G C       A     E   +G V PN V     ++ + K G+        + M  
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
               P+  T N ++DG+   GKI +  +L   M +     +  +YNIL++GY K K+V  
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           +  LY  +   GI P  +T ++L  G+ E    E  LK+        V  D  T+   I 
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 832

Query: 376 GLCVRPQVRFTY 387
             C   ++ + +
Sbjct: 833 KCCANGEINWAF 844



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  LL  L K  H        K L+++    D   Y+ L+   CK G ++    +
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
           FG +++    P+  T+TSLI GLC + + V A     + +A G   PN + Y   ++G+ 
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G     +   ++M N      +   P+ VT + +IDG  + G ++K  +L  +M  +N
Sbjct: 696 KAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN+ TY  L+HG+    D + +  L   ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L   +   V  + +T+N L+   C  G+IN   +L   M S+G   D  + + +++  
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            +N   +E+  + +E+  +GI P    Y  L +GL  +   + A  +  EM  + +
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 21/337 (6%)

Query: 44   PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
            P+L TY+IL++ + K   VS  F+++  I+ +   P+ +T  SL+ G+C ES ++E    
Sbjct: 752  PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 808

Query: 104  FTKLKAF---GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
               LKAF   G E +  T+N LI+  C  G    A +L K MT+    +G+    +T   
Sbjct: 809  LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTC-- 862

Query: 161  SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
              ++  L +     +++ +  +M  + ++P    Y  LI+G C   D   A  +  EM+ 
Sbjct: 863  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922

Query: 221  QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
              + P  V+ + ++  L K GK D A+ LL  M++  + P   ++ TLM   C  G +  
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982

Query: 281  VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              EL V M + G K D  SYN+LI G C   ++  A  LY E+   G      TY  L  
Sbjct: 983  ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042

Query: 341  GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL     A           G D+       R FI  +
Sbjct: 1043 GLLARETA---------FSGADIILKDLLARGFITSM 1070



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++SF  L+    KN +    L L   +++ GL  DL +Y++LI   C  G ++L F +
Sbjct: 962  PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
            +  +    F  N  T+ +LI+GL A       A +  K
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 198/409 (48%), Gaps = 41/409 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + N LL  L +   ++  L ++  +   G+ PD  +Y  L++   KMG+      ++ 
Sbjct: 429 VVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWN 488

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            IL   +  +   F ++I G C   +++EA   F ++K  G EP+ +TY TLI+G C+ G
Sbjct: 489 DILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG 548

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A  + ++M            P+   Y+ +I GL K     +  +L  +M  + L+P
Sbjct: 549 NVEEAFKVKEKMEKE------AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSP 602

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           NVVTY +LI G+C     ++A     +M+++G  PNV+  + I++ L + G++D A+ LL
Sbjct: 603 NVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLL 662

Query: 251 DLMVQCDV-----------------------------------RPNAFTYNTLMDGFCLT 275
             MV  DV                                    PN+  YN  + G C +
Sbjct: 663 QKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKS 722

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           GK++  K++F S+   G   D+F+Y  LI+GY     V +A SL +E+  +G+ P ++TY
Sbjct: 723 GKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITY 782

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           N L +GL +    +RA KLF ++    +A +  +Y   IDG C     R
Sbjct: 783 NALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTR 831



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 202/441 (45%), Gaps = 77/441 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P + S N LL  L +       + ++  +N +G+ PD++T SI++N +CK G V+     
Sbjct: 181 PSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDF 240

Query: 64  ------LGF----VIFGRILRSCFA--------------------PNVVTFTSLIKGLCA 93
                 LGF    V +  ++  C +                     N VT T LIKG C 
Sbjct: 241 VKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCR 300

Query: 94  ESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           + ++ EA  +  ++ ++ G   +   Y  LI+G CR      A+ L  EM N      V 
Sbjct: 301 QCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLN------VG 354

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            + N    + +I+G CK G V +A+ L ++M   +L P   +Y++L+ GFC      +A 
Sbjct: 355 LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAI 414

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY------- 265
            +  EM+  G+Q NVV+ N ++  LC+ G  ++A  +  LM++  V P+  +Y       
Sbjct: 415 SVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474

Query: 266 ----------------------------NTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
                                       NT+++GFC   K+   +E F  M+ +G + D 
Sbjct: 475 FKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+GYCK   VEEA  +  ++  + I P++  YN+L  GLF+ ++    + L  E
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M    ++ +  TY T I G C
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWC 615



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 10/348 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+G L K+K    V+ L   +   GL P++ TY  LI  +C  G++   F  
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++   FAPNV+  + ++  L    RI EA  L  K+       N+  +  L +G   
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM------VNLDVF--LDHGYFD 678

Query: 129 TGHTIVALNL-FKEMTNGNGEIGVVFK-PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
             H     NL  +++ +   E    F  PN+V Y+I I GLCK G VD AK++F  +   
Sbjct: 679 RLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLR 738

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
             +P+  TY +LIHG+  A + N+A  L  EM+ +G+ PN+++ N ++N LCK+G +D A
Sbjct: 739 GFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRA 798

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +L D +    + PN  +YN L+DG+C  G      +L   M   G      +Y+ LI G
Sbjct: 799 QKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYG 858

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           +CK  ++ +A +L +E+        +  +  L  G  +  + ++  KL
Sbjct: 859 FCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 66/409 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+S   L+  L++ + YD   S    L    + P    YS L              V+
Sbjct: 92  PNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSL--------------VV 133

Query: 69  FGRILRSC----FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
           +  ++R      F+P V  F  ++K  C +  I  A  +F  +   GC P++ + N L++
Sbjct: 134 WNELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLS 191

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            L R G +  A+ ++  +      +G+V  P+  T SI+++  CK+G+V+ A +   +M 
Sbjct: 192 SLVRKGESSNAILVYDHIN----RLGIV--PDVFTCSIMVNAYCKDGWVNVAVDFVKEMD 245

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV---------------- 228
           Y     NVVTY SLI G     D   A+ +L  M ++G+  N V                
Sbjct: 246 YLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLE 305

Query: 229 --------------------SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
                               +  V+++  C+  KMD+A RL D M+   +R N F  N L
Sbjct: 306 EAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNAL 365

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           ++G+C  G+++  + L + M     + + +SY+ L++G+C+   V +A+S+YNE+   GI
Sbjct: 366 INGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGI 425

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +  VVT+N+L  GL  +   E AL ++  M    V  D  +Y T +D L
Sbjct: 426 QSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 23/219 (10%)

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL--- 237
           L  K  N  PNV ++  L+H    A  ++E +  L E+V      N  SS V+ NEL   
Sbjct: 83  LASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTP--SKNNYSSLVVWNELVRV 140

Query: 238 ------------------CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
                             C+ G + NA  + D M +    P+  + N L+      G+ +
Sbjct: 141 FEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESS 200

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               ++  +  +G   D F+ +I++N YCK+  V  A+    E+ + G +  VVTYN+L 
Sbjct: 201 NAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLI 260

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G   I   ERA  +   M    +  +  T    I G C
Sbjct: 261 DGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYC 299



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+    P V S+NIL+    KN +    L L  ++   G+ P L TYS LI  FCK G +
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 63  SLGFVIFGRILRSCFA-PNVVTFTSLIKG 90
                +    +R  FA  N+  F  L++G
Sbjct: 866 GKATNLLDE-MRELFADQNIAKFVKLVEG 893


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + IL+    +N   D    +F R++ +GL  + Y Y+I+IN F K G    GF +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++      PN+ T+ SLI   C + ++  A  +F ++   G   N +TYN LI GLCR
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L + M   +        P T T+++++DGLC  G +DKA     ++K   L
Sbjct: 260 KGQVSKAEGLLERMKRAH------INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGL 313

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P +VTY  LI GF    + +    L+ EM D+G+ P+ V+  ++MN   ++  ++ A  
Sbjct: 314 CPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYE 373

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  LM +  + P+  TY  L+ G C+ G +    +L+ SM  M  + +D  YN +INGYC
Sbjct: 374 MFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYC 433

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K     +AL    E+   G+ P V +Y +    L +  ++  A +L  EM
Sbjct: 434 KECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEM 483



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I +    +N +      L  ++ ++G+ P+++ Y+ILI   C+ G +    V+F 
Sbjct: 107 VYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFS 166

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R+     A N   +T +I G   +    +   L+ K+K  G  PN+ TYN+LI   CR G
Sbjct: 167 RMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDG 226

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +A  +F E++    + GV    N VTY+I+I GLC++G V KA+ L  +MK  ++NP
Sbjct: 227 KLSLAFKVFDEIS----KRGVA--CNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
              T+  L+ G C+    ++A   L ++   G+ P +V+ N++++   K G     S L+
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+  TY  LM+ F  +  I +  E+F  M+ +G   D  +Y +LI+G C  
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  LY  +    ++P  V YNT+ +G  +   + +ALK   EM  N V  +  +Y
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460

Query: 371 RTFIDGLC 378
            + I  LC
Sbjct: 461 ISTIQILC 468



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 165/317 (52%), Gaps = 6/317 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + I++    K  +      L++++  +G+ P+LYTY+ LI  +C+ G++SL F +F  I 
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +   A N VT+  LI GLC + ++ +A  L  ++K     P   T+N L++GLC TG   
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL+  +++      IG+   P  VTY+I+I G  K G      EL  +M+   ++P+ V
Sbjct: 300 KALSYLEKLK----LIGLC--PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT L++ F  ++D  +A  +   M   G+ P+  +  V+++ LC  G M  AS+L   M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V+  ++PN   YNT+++G+C      +  +    M   G   +  SY   I   CK+ + 
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKS 473

Query: 314 EEALSLYNELPFKGIKP 330
            EA  L  E+   G+KP
Sbjct: 474 IEAKRLLKEMTEAGLKP 490



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 9/351 (2%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIK 89
           L  FK +   G  P  ++++  ++   K G +   +  F   L R+ F  +V +F   IK
Sbjct: 58  LDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF--DVYSFGITIK 115

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C    + +   L  +++  G  PNV  Y  LI   CR G    A  +F  M     ++
Sbjct: 116 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD----DL 171

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+    N   Y+I+I+G  K+G+     EL+ +MK   + PN+ TY SLI  +C     +
Sbjct: 172 GLA--ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
            A  +  E+  +GV  N V+ N+++  LC+ G++  A  LL+ M +  + P   T+N LM
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           DG C TG++++       ++ +G      +YNILI+G+ K         L  E+  +GI 
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           P+ VTY  L +        E+A ++F  M+   +  D  TY   I GLC++
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+   +   ++++ + F  M  +  +P+  ++ + +     + + +   G   E + + 
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR- 102

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            Q +V S  + +   C+NG +     LL  M    V PN F Y  L++  C  G I++ K
Sbjct: 103 TQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            +F  M+ +G   + + Y I+ING+ K    ++   LY ++   G+ P + TYN+L    
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +   A K+F E+    VA +  TY   I GLC + QV
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQV 263



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+    ++   +    +F  +  IGL PD +TY +LI+  C  G +     +
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     PN V + ++I G C E    +A     ++   G  PNV +Y + I  LC+
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 129 TGHTIVALNLFKEMTNG 145
            G +I A  L KEMT  
Sbjct: 470 DGKSIEAKRLLKEMTEA 486


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 178/337 (52%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 84  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRV 143

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  P  VT++ +IDG CK G VD A E++ QM 
Sbjct: 204 GLCKEXKMDEANELFDEMLV----XGLV--PXGVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   B  +A  L+ EM  +G +P+ ++   +++  CK G +D
Sbjct: 258 SQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLD 317

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 318 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMII 377

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V     L  E+   G  P+VVTYN L +G
Sbjct: 378 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 102 KLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVV 161

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL++G  R G       L K   + +G      +P+  TYS++I+GLCKE  +D+A 
Sbjct: 162 SYNTLMSGYIRLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKEXKMDEAN 215

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M    L P  VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 216 ELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 275

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+  M     +P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 276 CKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 335

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G KP   TY  + +   +        KL  E
Sbjct: 336 VAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKE 395

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 396 MQRDGHVPSVVTYNVLMNG 414



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 10/235 (4%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P   T++ LI+  CK G+
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGR 245

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   I+ ++L     P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 246 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTT 305

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 306 LIDGCCKEGDLDTAFEHRKRMIQEN------IRLDDVAYTALISGLCQEGRSVDAEKMLR 359

Query: 182 QMKYENLNPNVVTYTSLIHGFCHAND-WNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           +M      P+  TYT +I+ FC   D W  +K LL EM   G  P+VV+ NV+MN
Sbjct: 360 EMLSVGXKPDTRTYTMIINEFCKKGDVWTGSK-LLKEMQRDGHVPSVVTYNVLMN 413



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 115/219 (52%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV+Y +L+ G+    D +E   L   M 
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMH 187

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L D M+   + P   T+ TL+DG C  G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVD 247

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L  E+  KG KP  +TY TL 
Sbjct: 248 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLI 307

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 308 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 346



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G+  VA ++F  +T          +P+ V+Y+ ++ G  + 
Sbjct: 120 GYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWG------LRPSVVSYNTLMSGYIRL 173

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C     +EA  L  EM+  G+ P  V+ 
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTF 233

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L   M  
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSL 293

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 294 KGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 353

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM       DT TY   I+  C +  V
Sbjct: 354 AEKMLREMLSVGXKPDTRTYTMIINEFCKKGDV 386



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 100/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +M+   + G +D   RL   M    
Sbjct: 131 LMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASG 190

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G      ++  LI+G+CKN  V+ A+
Sbjct: 191 VQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAM 250

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM       D  TY T IDG 
Sbjct: 251 EIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGC 310

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 311 CKEGDLDTAFEHRK 324



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSGLIT 63

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 64  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPA 123

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G +  A  + D + +  +RP+  +YNTLM G+   G ++    L 
Sbjct: 124 SLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLK 183

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  +++EA  L++E+   G+ P  VT+ TL  G  + 
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKN 243

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLK 282


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 178/372 (47%), Gaps = 6/372 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N  L  LAK    D     F+ +   G+   ++TY+I+I   CK G +     +
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSL 274

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +    P++VT+ SLI G      + E+  LF ++K  GCEP+VITYN LIN  C+
Sbjct: 275 FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCK 334

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +   EM N         KPN VTYS +ID LCKE  + +A +  L M+   L
Sbjct: 335 YEQMPKAFHFLHEMKNSG------LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN  TYTSLI   C A   ++A  L  EM+   V  NVV+   +++ LCK G+M  A  
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M++  V PN  TY  L+ G     ++    EL   ++    K D   Y  +I G C
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
              ++EE   + +E+   GI+   V Y       F+  +   AL L  EM    V     
Sbjct: 509 SQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV 568

Query: 369 TYRTFIDGLCVR 380
           T+   IDGLC +
Sbjct: 569 TFCVLIDGLCKK 580



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 183/405 (45%), Gaps = 42/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K    D    LF+ +  +G  PD+ TY+ LINCFCK  Q+   F  
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  S   PNVVT+++LI  LC E  + +A      ++  G  PN  TY +LI+  C+
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL L  EM     ++ V F  N VTY+ ++DGLCKEG + +A++LF  M    +
Sbjct: 405 AGYLSDALKLADEML----QVQVGF--NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGV 458

Query: 189 NPNVVTYTSLIHG-----------------------------------FCHANDWNEAKG 213
            PN+ TYT+L+HG                                    C  N   E + 
Sbjct: 459 TPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEF 518

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           ++ EM   G++ N V   + M+   K GK   A  LL  M    V     T+  L+DG C
Sbjct: 519 VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSY-NILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
             G +    + F  M     + ++ +    LI+G CKN  +E A  L++E+  K + P  
Sbjct: 579 KKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDK 638

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           + Y  L  G  + +  + AL +   M    +  D   Y + + GL
Sbjct: 639 IAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ L     +    +     F R+    +FP   + +  +    K G+  L    
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++ +  A +V T+  +I  +C E  +V A +LF ++K  G  P+++TYN+LI+G  +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    +  LF+EM +   E      P+ +TY+ +I+  CK   + KA     +MK   L
Sbjct: 300 LGLLDESFCLFEEMKDVGCE------PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY++LI   C  +   +A   L++M   G+ PN  +   +++  CK G + +A +
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+Q  V  N  TY TL+DG C  G++   ++LF +M   G   +  +Y  L++G+ 
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KNK VE AL L  E+  K IKP ++ Y T+  GL    + E    +  EM+   + A++ 
Sbjct: 474 KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSV 533

Query: 369 TYRTFIDG 376
            Y   +D 
Sbjct: 534 IYTIRMDA 541



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 166/335 (49%), Gaps = 6/335 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P    +  L + F ++G +      F R+ R    P   +  + +  L    +   +   
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F  +   G   +V TYN +I  +C+ G  + A +LF +M     ++G+   P+ VTY+ +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMK----QMGLT--PDIVTYNSL 293

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           IDG  K G +D++  LF +MK     P+V+TY +LI+ FC      +A   L EM + G+
Sbjct: 294 IDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PNVV+ + +++ LCK   +  A + L  M +  + PN FTY +L+D  C  G ++   +
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           L   M  +    +  +Y  L++G CK   + EA  L+  +   G+ P + TY  L HG  
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + ++ E AL+L  E++   +  D   Y T I GLC
Sbjct: 474 KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 30/304 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++  LL  L K         LF+ +   G+ P+L TY+ L++   K  +V     +  
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLK 486

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            I      P+++ + ++I GLC+++++ E   + +++KA G   N + Y   ++   +TG
Sbjct: 487 EIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTG 546

Query: 131 HTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTVTY- 160
            T+ ALNL +EM +   E+ +V                              +PN V   
Sbjct: 547 KTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVC 606

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDGLCK  +++ AK+LF +M+ +N+ P+ + YT+LI G     D+ EA  +   M +
Sbjct: 607 TALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSE 666

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G++ ++ +   ++  L +   +  A   L+ M+   + P+      L+  +   G I+ 
Sbjct: 667 LGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDE 726

Query: 281 VKEL 284
             EL
Sbjct: 727 AIEL 730



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 8/242 (3%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            I+ G  ++NK  +    +   + + G+  +   Y+I ++ + K G+      +   +  
Sbjct: 502 TIIWGLCSQNKLEECEF-VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCD 560

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN-VITYNTLINGLCRTGHTI 133
                 +VTF  LI GLC +  + EA   F ++  F  +PN V     LI+GLC+  +  
Sbjct: 561 LGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIE 620

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF EM + N        P+ + Y+ +IDG  K     +A  +  +M    +  ++ 
Sbjct: 621 AAKKLFDEMQDKN------MVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLH 674

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            YTSL+ G    N   +A+  L EM+ +G+ P+ +    ++ +  + G +D A  L D +
Sbjct: 675 AYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734

Query: 254 VQ 255
           ++
Sbjct: 735 LK 736



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G ++ A +    M +  V P A + N  +     TGK +   + F  M   G     F+Y
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NI+I   CK  ++  A SL++++   G+ P +VTYN+L  G  ++   + +  LF EM+ 
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315

Query: 361 NDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGNSG 395
                D  TY   I+  C   Q+   F +     NSG
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  + IL+    +N   D    +F R++ +GL  + Y Y+I+IN F K G    GF +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++      PN+ T+ SLI   C + ++  A  +F ++   G   N +TYN LI GLCR
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L + M   +        P T T+++++DGLC  G +DKA     ++K   L
Sbjct: 260 KGQVSKAEGLLERMKRAH------INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGL 313

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P +VTY  LI GF    + +    L+ EM D+G+ P+ V+  ++MN   ++  ++ A  
Sbjct: 314 CPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYE 373

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +  LM +  + P+  TY  L+ G C+ G +    +L+ SM  M  + +D  YN +INGYC
Sbjct: 374 MFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYC 433

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           K     +AL    E+   G+ P V +Y +    L +  ++  A +L  EM
Sbjct: 434 KECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEM 483



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I +    +N +      L  ++ ++G+ P+++ Y+ILI   C+ G +    V+F 
Sbjct: 107 VYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFS 166

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           R+     A N   +T +I G   +    +   L+ K+K  G  PN+ TYN+LI   CR G
Sbjct: 167 RMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDG 226

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +A  +F E++    + GV    N VTY+I+I GLC++G V KA+ L  +MK  ++NP
Sbjct: 227 KLSLAFKVFDEIS----KRGVAC--NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
              T+  L+ G C+    ++A   L ++   G+ P +V+ N++++   K G     S L+
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M    + P+  TY  LM+ F  +  I +  E+F  M+ +G   D  +Y +LI+G C  
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             + EA  LY  +    ++P  V YNT+ +G  +   + +ALK   EM  N V  +  +Y
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460

Query: 371 RTFIDGLC 378
            + I  LC
Sbjct: 461 ISTIQILC 468



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 165/317 (52%), Gaps = 6/317 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           + I++    K  +      L++++  +G+ P+LYTY+ LI  +C+ G++SL F +F  I 
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +   A N VT+  LI GLC + ++ +A  L  ++K     P   T+N L++GLC TG   
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL+  +++      IG+   P  VTY+I+I G  K G      EL  +M+   ++P+ V
Sbjct: 300 KALSYLEKLK----LIGLC--PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT L++ F  ++D  +A  +   M   G+ P+  +  V+++ LC  G M  AS+L   M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           V+  ++PN   YNT+++G+C      +  +    M   G   +  SY   I   CK+ + 
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKS 473

Query: 314 EEALSLYNELPFKGIKP 330
            EA  L  E+   G+KP
Sbjct: 474 IEAKRLLKEMTEAGLKP 490



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 9/348 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLC 92
           FK +   G  P  ++++  ++   K G +   +  F   L R+ F  +V +F   IK  C
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF--DVYSFWITIKAFC 118

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               + +   L  +++  G  PNV  Y  LI   CR G    A  +F  M     ++G+ 
Sbjct: 119 ENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD----DLGLA 174

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              N   Y+I+I+G  K+G+     EL+ +MK   + PN+ TY SLI  +C     + A 
Sbjct: 175 --ANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAF 232

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +  E+  +GV  N V+ N+++  LC+ G++  A  LL+ M +  + P   T+N LMDG 
Sbjct: 233 KVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGL 292

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C TG++++       ++ +G      +YNILI+G+ K         L  E+  +GI P+ 
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           VTY  L +        E+A ++F  M+   +  D  TY   I GLC++
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I+   +   ++++ + F  M  +  +P+  ++ + +     + + +   G   E + + 
Sbjct: 44  VINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR- 102

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            Q +V S  + +   C+NG +     LL  M    V PN F Y  L++  C  G I++ K
Sbjct: 103 TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            +F  M+ +G   + + Y I+ING+ K    ++   LY ++   G+ P + TYN+L    
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               +   A K+F E+    VA +  TY   I GLC + QV
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQV 263



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+    ++   +    +F  +  IGL PD +TY +LI+  C  G +     +
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++     PN V + ++I G C E    +A     ++   G  PNV +Y + I  LC+
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 129 TGHTIVALNLFKEMTNG 145
            G +I A  L KEMT  
Sbjct: 470 DGKSIEAKRLLKEMTEA 486


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 188/371 (50%), Gaps = 10/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NILL  L +N      +SL + +    L PD+++Y+ +I  FC+  ++     +  
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  S  + ++VT+  LI   C   ++ EA     ++K  G E +++ Y +LI G C  G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 131 HTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                  LF E +  G+        P  +TY+ +I G CK G + +A E+F  M    + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           PNV TYT LI G C      EA   L  M+++  +PN V+ N+I+N+LCK+G + +A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILINGY 307
           ++LM +   RP+  TYN L+ G C  G ++   +L   M  +S     D  SYN LI+G 
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK   + +AL +Y+ L  K      VT N L +   +     +A++L+ ++  + +  ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 368 CTYRTFIDGLC 378
            TY   IDG C
Sbjct: 495 DTYTAMIDGFC 505



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 8/364 (2%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           L+  L ++++++   S ++++     F +  + S L+ C+ +M +    F +   +L+  
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           FA NV     L+KGLC      +A +L  +++     P+V +YNT+I G C       AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L  EM  G+G        + VT+ I+ID  CK G +D+A     +MK+  L  ++V YT
Sbjct: 198 ELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           SLI GFC   + +  K L  E++++G  P  ++ N ++   CK G++  AS + + M++ 
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            VRPN +TY  L+DG C  GK     +    M     + +  +YNI+IN  CK+  V +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRTFI 374
           + +   +  +  +P  +TYN L  GL      + A KL   M  +      D  +Y   I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 375 DGLC 378
            GLC
Sbjct: 432 HGLC 435



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 45/415 (10%)

Query: 1   MRHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +R M  +   P V S+N ++    + K  +  L L   +   G    L T+ ILI+ FCK
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224

Query: 59  MGQV--SLGFV---------------------------------IFGRILRSCFAPNVVT 83
            G++  ++GF+                                 +F  +L    +P  +T
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
           + +LI+G C   ++ EA+ +F  +   G  PNV TY  LI+GLC  G T  AL     M 
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
             + E      PN VTY+III+ LCK+G V  A E+   MK     P+ +TY  L+ G C
Sbjct: 345 EKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 204 HANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
              D +EA  LL  M+       P+V+S N +++ LCK  ++  A  + DL+V+     +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             T N L++     G +N+  EL+  +       +  +Y  +I+G+CK   +  A  L  
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           ++    ++P+V  YN L   L +    ++A +LF EMQ ++   D  ++   IDG
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 8/337 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  TY+I+IN  CK G V+    I   + +    P+ +T+  L+ GLCA+  + EA+ L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409

Query: 104 -FTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
            +  LK     +P+VI+YN LI+GLC+      AL+++  +    G        + VT +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTN 463

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           I+++   K G V+KA EL+ Q+    +  N  TYT++I GFC     N AKGLL +M   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            +QP+V   N +++ LCK G +D A RL + M + +  P+  ++N ++DG    G I   
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           + L V M   G   D F+Y+ LIN + K   ++EA+S ++++   G +P     +++   
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                + ++  +L  ++   D+  D     T +D +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N V+ + L+  +        A G+L  M+ +G   NV + N+++  LC+N +   A  LL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +  + P+ F+YNT++ GFC   ++ +  EL   M+  GC     ++ ILI+ +CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +++EA+    E+ F G++  +V Y +L  G  +  + +R   LF E+     +    TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 371 RTFIDGLCVRPQVR 384
            T I G C   Q++
Sbjct: 286 NTLIRGFCKLGQLK 299



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 7/237 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NILL    K    +  + L+K+++   +  +  TY+ +I+ FCK G +++   +  ++  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S   P+V  +  L+  LC E  + +A  LF +++     P+V+++N +I+G  + G    
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A +L   M+           P+  TYS +I+   K G++D+A   F +M      P+   
Sbjct: 583 AESLLVGMSRAG------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC-KNGKMDNASRLL 250
             S++       + ++   L+ ++VD+ +  +   +  +M+ +C  +  MD A RLL
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N LL  L K    D    LF+ +     FPD+ +++I+I+   K G +     +
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R+  +P++ T++ LI        + EA + F K+   G EP+    ++++     
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646

Query: 129 TGHTIVALNLFKEMTNGN 146
            G T     L K++ + +
Sbjct: 647 QGETDKLTELVKKLVDKD 664


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 196/404 (48%), Gaps = 40/404 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+++  L K   +D    ++ R+       DLYTYS LI+  C  G +     +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 69  FGRILRSCFAPNVVTFTS----------------------------------LIKGLCAE 94
           +  +  +  +P+VV + +                                  LI+GL   
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN 372

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
           +++ EA +++  L    C  + +TY  L++GLC+ G+   AL++ +E  NG G++     
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL----- 427

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            +T  YS +I+GLC+EG +D+   +  QM      PN     ++I+GF  A+   +A   
Sbjct: 428 -DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              MV +G  P VV+ N ++N L K  +   A  L+  M+    +PN  TY+ LM+G C 
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             K++    L+      G K D   +NI+I+G C + +VE+AL LY+E+  +   P +VT
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +NTL  G +++R  ERA K++  +       D  +Y   + GLC
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 194/422 (45%), Gaps = 39/422 (9%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  +    P + S+N LL  L ++  +D   S F    ++GL P+L TY+ILI   C+  
Sbjct: 104 MHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKK 163

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q      +   +    F+P+V ++ +LI  L     + +A  LF ++   G  P+V  YN
Sbjct: 164 QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYN 223

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            LI+G  + G  + A  +++ +  G         PN  +Y+++I+GLCK G  D++ E++
Sbjct: 224 ILIDGFFKKGDILNASEIWERLLKGPS-----VYPNIPSYNVMINGLCKCGKFDESFEIW 278

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV------------ 228
            +MK      ++ TY++LIHG C + + + A  +  EM + GV P+VV            
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 229 ----------------------SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
                                 S N+++  L +N K+D A  + +L+ + D   ++ TY 
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYG 398

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ G C  G +N+   +    E+     D F+Y+ +ING C+   ++E   + +++   
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           G KP     N + +G     + E AL+ F  M          TY T I+GL    +    
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 387 YA 388
           YA
Sbjct: 519 YA 520



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%), Gaps = 9/359 (2%)

Query: 22  AKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           AKN   D  L +F+R++ I G  P + +Y+ L+N   +  +       F        +PN
Sbjct: 89  AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 148

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
           + T+  LIK  C + +  +A  L   +   G  P+V +Y TLIN L + G+   AL LF 
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYENLNPNVVTYTSLI 199
           EM     E GV   P+   Y+I+IDG  K+G +  A E++ + +K  ++ PN+ +Y  +I
Sbjct: 209 EMP----ERGVT--PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           +G C    ++E+  +   M       ++ + + +++ LC +G +D A+R+   M +  V 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           P+   YNT+++G+   G+I    EL+  ME  GC+    SYNILI G  +N +V+EA+S+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +  LP K      +TY  L HGL +     +AL +  E +      DT  Y + I+GLC
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NIL+  L +N   D  +S+++ L       D  TY +L++  CK G ++    I  
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                    +   ++S+I GLC E R+ E A +  ++   GC+PN    N +ING  R  
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL  F  M +        F P  VTY+ +I+GL K     +A  L  +M ++   P
Sbjct: 479 KLEDALRFFGNMVSKG-----CF-PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N++TY+ L++G C     + A  L  + +++G +P+V   N+I++ LC +GK+++A +L 
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 592

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M Q    PN  T+NTLM+GF       R  +++  +   G + D  SYNI + G C  
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSC 652

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             + +A+   N+   +G+ PT +T+N L   + +
Sbjct: 653 HRISDAVGFLNDAVDRGVLPTAITWNILVRAVLD 686



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 21/310 (6%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  IL+  F P +V   S         RIVE      + +   C  +V    T+I    
Sbjct: 45  VFHHILKRLFDPKLVAHVS---------RIVE----LIRTQKCKCPEDVAL--TVIKAYA 89

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      AL++F+ M    G      +P   +Y+ +++ L +    D+A+  FL  +   
Sbjct: 90  KNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG 144

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN+ TY  LI   C    +++AK LL  M +QG  P+V S   ++N L KNG M +A 
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF-SYNILING 306
           +L D M +  V P+   YN L+DGF   G I    E++  +      + +  SYN++ING
Sbjct: 205 KLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 264

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK  + +E+  +++ +        + TY+TL HGL      + A +++ EM  N V+ D
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324

Query: 367 TCTYRTFIDG 376
              Y T ++G
Sbjct: 325 VVVYNTMLNG 334



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 6/239 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P     N ++    +    +  L  F  + S G FP + TY+ LIN   K  + S 
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + +   +L   + PN++T++ L+ GLC   ++  A  L+ +    G +P+V  +N +I+
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC +G    AL L+ EM            PN VT++ +++G  K    ++A +++  + 
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRK------CVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
                P++++Y   + G C  +  ++A G L + VD+GV P  ++ N+++  +  NG +
Sbjct: 632 QYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 267 TLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           T++  +      ++  ++F  M E  GC+    SYN L+N   ++ + +EA S +     
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G+ P + TYN L       +Q ++A +L   M     + D  +Y T I+ L
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPTV 332
           L   ++R+ EL   + +  CK  +     +I  Y KN   ++AL ++  +    G +P +
Sbjct: 58  LVAHVSRIVEL---IRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGI 114

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            +YN+L + L E  + + A   F+  +   ++ +  TY   I   C + Q
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ 164


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N  +    K      V  +   +   G+  ++ TY++LI+ F  +G++     +F 
Sbjct: 260 VVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFE 319

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +       +V  +TS+I   C    +  A  LF ++   G  P+  TY  LI+G+C+ G
Sbjct: 320 EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAG 379

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM  G G        N V ++ +IDG C+ G VD+A  L + M+ + L  
Sbjct: 380 QMEAAQMLVNEM-QGKG-----IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLES 433

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V  Y S+  G C  N  +EAKGLL  MV++GV PN +S   +++  CK G    A R+ 
Sbjct: 434 DVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVF 493

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    PN  TYN L+DG+   G +    +L   +E+ G   D ++   LI+G C +
Sbjct: 494 REMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID 553

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V+ AL L++E+P +G+ P VVTY  +  GL +  ++E A KL+ EM+   +  D   Y
Sbjct: 554 GKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 613

Query: 371 RTFIDGL 377
            + +  L
Sbjct: 614 SSLVGSL 620



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 6/368 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           + L  L +    D+ L  F+R+ ++ +   +Y+ +I+++  CK G V +G  +   +   
Sbjct: 195 VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK 254

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
               NVVT+ + I+G      +   A + T ++  G   NV+TY  LI+G    G    A
Sbjct: 255 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 314

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             LF+EM     E G+  + +   Y+ II   C+ G V +A  LF +M  + L P+  TY
Sbjct: 315 QRLFEEMR----EKGI--EADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 368

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LIHG C A     A+ L+ EM  +G+  N V  N +++  C++G +D A RL  +M +
Sbjct: 369 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             +  + F YN++  G C   + +  K L  SM   G   +  S+  LI+ YCK     E
Sbjct: 429 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 488

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  ++ E+  KG  P ++TYN L  G  +    + A KL  E++   +  D  T  + I 
Sbjct: 489 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 548

Query: 376 GLCVRPQV 383
           G C+  +V
Sbjct: 549 GECIDGKV 556



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 185/428 (43%), Gaps = 64/428 (14%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L    A NK +   L  F+ +   G   D  +  + +    + GQV      F R++
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT------------ 121
                  V + T ++ GLC    +     L  ++ A G + NV+TYN             
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 122 -----------------------LINGLCRTGHTIVALNLFKEM---------------- 142
                                  LI+G    G    A  LF+EM                
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 143 ----TNGNGEIGVV---------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                +GN +  +V           P+  TY  +I G+CK G ++ A+ L  +M+ + ++
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            N V + +LI G+C +   +EA  L + M  +G++ +V + N I + LCK  + D A  L
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  MV+  V PN  ++ TL+D +C  G     K +F  ME  G   +  +YN+LI+GY K
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              ++EA  L +EL  +G+ P V T  +L HG     + + ALKLF EM    +  +  T
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577

Query: 370 YRTFIDGL 377
           Y   I GL
Sbjct: 578 YTAMISGL 585



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 11/299 (3%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
            F ++     E  V +   +++GLC+ G   +   L  E+       GV  K N VTY+ 
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 265

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            I+G  K   +    E+   M+ E +  NVVTYT LIHGF +     EA+ L  EM ++G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           ++ +V     I++  C++G +  A  L D M    + P+A TY  L+ G C  G++   +
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M+  G   +   +N LI+GYC++  V+EAL L   +  KG++  V  YN++  GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYARRKGNSGN 396
            ++ + + A  L   M    V+ +T ++ T ID  C     V  +  F     KGN  N
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF  L+    K  ++     +F+ +   G  P++ TY++LI+ + K G +     +
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 527

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+V T TSLI G C + ++  A  LF ++   G  PNV+TY  +I+GL +
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G +  A  L+ EM     E G+   P+   YS ++  L
Sbjct: 588 DGRSEEAFKLYDEMK----ETGLT--PDDTVYSSLVGSL 620



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P TV  S++ D  C E   ++AK    + K+ +L         L   +     + EA   
Sbjct: 131 PVTVIASLV-DDACNESKCNRAK---FKEKFFDL---------LFRVYADNKMFGEALEA 177

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M  +G   +  S  V +  L + G++D+  R    MV  DV    ++   ++DG C 
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +   ++L   + + G K +  +YN  I GY K  ++     +   +  +G+   VVT
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           Y  L HG   I + E A +LF EM+   + AD   Y + I   C    V+
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N  +    K      V  +   +   G+  ++ TY++LI+ F  +G++     +F 
Sbjct: 264 VVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFE 323

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +       +V  +TS+I   C    +  A  LF ++   G  P+  TY  LI+G+C+ G
Sbjct: 324 EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAG 383

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L  EM  G G        N V ++ +IDG C+ G VD+A  L + M+ + L  
Sbjct: 384 QMEAAQMLVNEM-QGKG-----IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLES 437

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +V  Y S+  G C  N  +EAKGLL  MV++GV PN +S   +++  CK G    A R+ 
Sbjct: 438 DVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVF 497

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    PN  TYN L+DG+   G +    +L   +E+ G   D ++   LI+G C +
Sbjct: 498 REMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID 557

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V+ AL L++E+P +G+ P VVTY  +  GL +  ++E A KL+ EM+   +  D   Y
Sbjct: 558 GKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 617

Query: 371 RTFIDGL 377
            + +  L
Sbjct: 618 SSLVGSL 624



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 6/368 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           + L  L +    D+ L  F+R+ ++ +   +Y+ +I+++  CK G V +G  +   +   
Sbjct: 199 VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK 258

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
               NVVT+ + I+G      +   A + T ++  G   NV+TY  LI+G    G    A
Sbjct: 259 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 318

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
             LF+EM     E G+  + +   Y+ II   C+ G V +A  LF +M  + L P+  TY
Sbjct: 319 QRLFEEMR----EKGI--EADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 372

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            +LIHG C A     A+ L+ EM  +G+  N V  N +++  C++G +D A RL  +M +
Sbjct: 373 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             +  + F YN++  G C   + +  K L  SM   G   +  S+  LI+ YCK     E
Sbjct: 433 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 492

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  ++ E+  KG  P ++TYN L  G  +    + A KL  E++   +  D  T  + I 
Sbjct: 493 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 552

Query: 376 GLCVRPQV 383
           G C+  +V
Sbjct: 553 GECIDGKV 560



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 185/428 (43%), Gaps = 64/428 (14%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L    A NK +   L  F+ +   G   D  +  + +    + GQV      F R++
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT------------ 121
                  V + T ++ GLC    +     L  ++ A G + NV+TYN             
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 122 -----------------------LINGLCRTGHTIVALNLFKEM---------------- 142
                                  LI+G    G    A  LF+EM                
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 143 ----TNGNGEIGVV---------FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                +GN +  +V           P+  TY  +I G+CK G ++ A+ L  +M+ + ++
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            N V + +LI G+C +   +EA  L + M  +G++ +V + N I + LCK  + D A  L
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  MV+  V PN  ++ TL+D +C  G     K +F  ME  G   +  +YN+LI+GY K
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              ++EA  L +EL  +G+ P V T  +L HG     + + ALKLF EM    +  +  T
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581

Query: 370 YRTFIDGL 377
           Y   I GL
Sbjct: 582 YTAMISGL 589



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 13/214 (6%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N +   L K    D    L   +   G+ P+  +++ LI+ +CK G       +F 
Sbjct: 439 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFR 498

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN++T+  LI G      + EA  L  +L+  G  P+V T  +LI+G C  G
Sbjct: 499 EMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDG 558

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              +AL LF EM     + G+V  PN VTY+ +I GL K+G  ++A +L+ +MK   L P
Sbjct: 559 KVDMALKLFDEMP----QRGLV--PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 612

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +   Y+SL+ G  H+ D +      I M  QG Q
Sbjct: 613 DDTVYSSLV-GSLHSADES------ISMQIQGSQ 639



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   SF  L+    K  ++     +F+ +   G  P++ TY++LI+ + K G +     +
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 531

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+V T TSLI G C + ++  A  LF ++   G  PNV+TY  +I+GL +
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G +  A  L+ EM     E G+   P+   YS ++  L
Sbjct: 592 DGRSEEAFKLYDEMK----ETGLT--PDDTVYSSLVGSL 624



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 147/359 (40%), Gaps = 31/359 (8%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRI---LRSCFAPNVVTFTSLIKGLCAES----- 95
           PD   +S L   F     + L   I G+I   L S  A ++ T  SL+  L +++     
Sbjct: 6   PDERMWSNLKKAFSSNPSLKLNQEIAGKISKTLVSSGAKSLQTTPSLLSSLNSQTVHLIL 65

Query: 96  --RIVEAAA---LFTKLKAFGCEPNVITYNTLINGLCRTG-----HTIVALNLFKEMTNG 145
              I+ A +    F  ++    +P++  Y TLI  L R+      H        + + N 
Sbjct: 66  SNHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNC 125

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                 +  P TV  S++ D  C E   ++AK    + K+ +L         L   +   
Sbjct: 126 AAVDDGLRVPVTVIASLV-DDACNESKCNRAK---FKEKFFDL---------LFRVYADN 172

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
             + EA      M  +G   +  S  V +  L + G++D+  R    MV  DV    ++ 
Sbjct: 173 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSL 232

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
             ++DG C  G +   ++L   + + G K +  +YN  I GY K  ++     +   +  
Sbjct: 233 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G+   VVTY  L HG   I + E A +LF EM+   + AD   Y + I   C    V+
Sbjct: 293 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 196/406 (48%), Gaps = 44/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++  L K   +D  L +++R+       D++TYS LI+  C+ G +     +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314

Query: 69  FGRILRSCFAPN----------------------------------VVTFTSLIKGLCAE 94
           +  I+ S    +                                  VV++  LIKGL   
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFEN 374

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
            ++ EA +++  L   GC P   TY  LI+GLC+ G    AL +FKE  +G G++     
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL----- 429

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE--NLNPNVVTYTSLIHGFCHANDWNEAK 212
            +   YS ++DGLCKEG +D+A  +  QM      L+P+V     LI+GF  A+   +A 
Sbjct: 430 -DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAI 486

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
               EM  +G  P +VS N ++  LCK  +   A   +  M++ + +P+  T + LMDG 
Sbjct: 487 NFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   KI     L+      G K D   YNIL++G C   ++E+AL LY+ +      P +
Sbjct: 547 CQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNL 606

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VT NTL  GL+++R  E+A +++  +  + +  D  +Y   I GLC
Sbjct: 607 VTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLC 652



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 196/379 (51%), Gaps = 8/379 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+  + K       L +F  ++  G+  D+  Y++LI+ F K G    G  I
Sbjct: 184 PDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI 243

Query: 69  FGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           + R+++ C   PNVVT+  +I GLC   R  E+  ++ ++     E ++ TY++LI+GLC
Sbjct: 244 WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G+   A+ ++KE+   +  +      + VT++ +++G C+ G + ++ EL++ M  EN
Sbjct: 304 EAGNIDGAVRVYKEIVESSLVV------DAVTHNAMLNGFCRAGKIKESFELWMVMGKEN 357

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
               VV+Y  LI G        EA  +   +  +G +P   +  V+++ LCKNG+++ A 
Sbjct: 358 CQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKAL 416

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++         + +A+ Y++++DG C  G+++    +   M+  G K D    N LING+
Sbjct: 417 KIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGF 476

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            +  ++E+A++ + E+  KG  PT+V+YNTL  GL +  +   A     EM   +   D 
Sbjct: 477 VRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDM 536

Query: 368 CTYRTFIDGLCVRPQVRFT 386
            T    +DGLC   ++   
Sbjct: 537 ITCSLLMDGLCQEKKIEMA 555



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 43/424 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+ +    P V S+N LL    +   +D   S  +   S+ + P+L TY+ILI   CK  
Sbjct: 106 MQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQ 165

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--------- 111
           Q+     +   +      P+V ++ +LI G+     ++ A  +F ++   G         
Sbjct: 166 QIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYN 225

Query: 112 -------------------------CE--PNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
                                    C   PNV+TYN +INGLC+ G    +L +++ MT 
Sbjct: 226 MLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTK 285

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
              E       +  TYS +I GLC+ G +D A  ++ ++   +L  + VT+ ++++GFC 
Sbjct: 286 NERE------KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCR 339

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A    E+  L + M  +  Q  VVS N+++  L +NGK++ A  + +L+ +   RP + T
Sbjct: 340 AGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTT 398

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           Y  L+ G C  G++N+  ++F   E    K D ++Y+ +++G CK   ++EA+S+ N++ 
Sbjct: 399 YGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMD 458

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +G K      N L +G     + E A+  F EM+    +    +Y T I GLC   +  
Sbjct: 459 KRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFS 518

Query: 385 FTYA 388
             Y+
Sbjct: 519 EAYS 522



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 6/338 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NIL+  L +N   +  +S+++ L   G  P+  TY +LI+  CK G+++    IF 
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                    +   ++S++ GLC E R+ EA ++  ++   G + +    N LING  R  
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+N F+EM            P  V+Y+ +I GLCK     +A     +M  +   P
Sbjct: 481 KLEDAINFFREMECKG------CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKP 534

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++T + L+ G C       A  L  + +D+G +P++   N++M+ LC   K+++A +L 
Sbjct: 535 DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLY 594

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    PN  T NTLM+G        +  E++  +   G   D  SYNI I G C  
Sbjct: 595 SHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSC 654

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
             + +A+   N+   +GI PT VT+N L       R +
Sbjct: 655 SRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFRTS 692



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 147/306 (48%), Gaps = 7/306 (2%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           F  +++ L A+SR+V   +    + KA  C        T+I    +   +  AL+ F+ M
Sbjct: 47  FHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNM 106

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            +  G      KP   +Y+ +++   +    D+A+      +  +++PN+ TY  LI   
Sbjct: 107 QDIFG-----CKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKIS 161

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C      +A  LL  M  Q ++P+V S   ++N + K G +  A ++ D M    V  + 
Sbjct: 162 CKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADV 221

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             YN L+DGF   G  ++ KE++  + +      +  +YNI+ING CK    +E+L ++ 
Sbjct: 222 TCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE 281

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
            +     +  + TY++L HGL E    + A++++ E+  + +  D  T+   ++G C   
Sbjct: 282 RMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAG 341

Query: 382 QVRFTY 387
           +++ ++
Sbjct: 342 KIKESF 347



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 6/193 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N L+  L K + +    S  K +      PD+ T S+L++  C+  ++ +   +
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + + L   F P++  +  L+ GLC+  ++ +A  L++ +K   C PN++T NTL+ GL +
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  ++  +            P+ ++Y+I I GLC    +  A E         +
Sbjct: 619 VRDYEKASEIWDCILKDG------LHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGI 672

Query: 189 NPNVVTYTSLIHG 201
            P  VT+  L+  
Sbjct: 673 LPTAVTWNILVRA 685


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 186/412 (45%), Gaps = 42/412 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR  +   P V ++ +++  L +    D    +   L   G+ P + TY++L++  C+ G
Sbjct: 206 MRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSG 265

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   F + GR++     P++VTF  LI GL    R  E  A+  +++ FG  PN + YN
Sbjct: 266 RVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYN 325

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE-- 178
            LI   CR GH   AL LF EM +         K   VTY++I   LCKEG ++ A++  
Sbjct: 326 QLIGWHCREGHCSEALRLFDEMVSKG------IKQTVVTYNLIAKALCKEGEMEHAEQIL 379

Query: 179 ----------------------------------LFLQMKYENLNPNVVTYTSLIHGFCH 204
                                             L  +M    L PN    T+ I   C 
Sbjct: 380 DEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCK 439

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
                EA  +   ++ +G+  N+ +SN +++ LC+   M  A+++L  MV   V  +  T
Sbjct: 440 RGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRIT 499

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YN ++   C   K+    +L   M   G K D F++N  +  YC   +VE+ L L +++ 
Sbjct: 500 YNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMK 559

Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            +G+KP +VTY T+  G  + +   +A K  +E+  N +  +   Y   I G
Sbjct: 560 SEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 173/351 (49%), Gaps = 6/351 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D VL L + + +  L P+    +  I   CK G+      I+  +L      N+ T  +L
Sbjct: 409 DVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNAL 468

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I GLC  + + EA  +   +   G E + ITYN +I   C+      A+ L  +M     
Sbjct: 469 IHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG- 527

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                FKP+  T++  +   C  G V+    L  QMK E L P++VTY ++I G+C A D
Sbjct: 528 -----FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            ++A   LIE++  G++PN V  N ++    +NG + +A  +LD M    ++P   TYN+
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LM   C  G +   KE+F        +     Y I+I G+CK  +++EA+  + E+ ++ 
Sbjct: 643 LMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRD 702

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           I+P  +TY TL +   +    E A KLF EM  + +  DT +Y T I G C
Sbjct: 703 IRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 178/417 (42%), Gaps = 78/417 (18%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR-SCFAPNVVTFTSLIKGLC 92
           F  L++ G  P + T +IL+      GQ+ L   +FG +   +  AP+V T+T +IK LC
Sbjct: 168 FLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALC 227

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               I  A  +  +L+  G +P V+TYN L++ LCR+G    A  L   M  G       
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR------ 281

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+ VT+ I+I+GL +     +   +  +M+   + PN V Y  LI   C     +EA 
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM------VQCD--------- 257
            L  EMV +G++  VV+ N+I   LCK G+M++A ++LD M      V C          
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401

Query: 258 ---------------------VRPNAFTYNTLMDGFCLTGKINRVKELFV---------- 286
                                ++PN       +   C  GK     E++           
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461

Query: 287 -------------------------SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
                                    +M   G + D  +YNI+I   CK  ++EEA+ L +
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           ++  +G KP + T+NT       + + E  L L  +M+   +  D  TY T IDG C
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 7/337 (2%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           + KH +     F  L   GL  ++ T + LI+  C+   +     +   ++ S    + +
Sbjct: 440 RGKHEEAAEIWFLVLGK-GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRI 498

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           T+  +I+  C  S++ EA  L   +   G +P++ T+NT +   C  G     L+L  +M
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            +         KP+ VTY  IIDG CK   V KA +  +++    L PN V Y +LI G+
Sbjct: 559 KSEG------LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
                 ++A G+L  M   G+QP  ++ N +M  +C  G ++ A  +    +  ++    
Sbjct: 613 GRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
             Y  ++ GFC  GKI+     F  M     + +  +Y  L+  YCK    EEA  L++E
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE 732

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +   GI P  V+YNTL  G  E+   ++ ++   EM 
Sbjct: 733 MVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 6/278 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++NI++    K    +  + L   +   G  PDL+T++  +  +C +G+V     +  ++
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P++VT+ ++I G C    + +A     +L   G  PN + YN LI G  R G  
Sbjct: 559 KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSI 618

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ +   M + NG      +P  +TY+ ++  +C  G V++AKE+F Q   +N+   V
Sbjct: 619 SDAIGVLDTMKH-NG-----IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + YT +I GFC     +EA     EM  + ++PN ++   +M   CK G  + A +L D 
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE 732

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           MV   + P+  +YNTL+ G C    ++++ E    M S
Sbjct: 733 MVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 6/237 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN  L         + +L L  ++ S GL PD+ TY  +I+ +CK   V      
Sbjct: 530 PDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKY 589

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++   PN V + +LI G      I +A  +   +K  G +P  ITYN+L+  +C 
Sbjct: 590 LIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCH 649

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F +    N E+GV      + Y+III G CK G +D+A   F +M Y ++
Sbjct: 650 AGLVEEAKEIFAQCILKNIELGV------IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDI 703

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            PN +TYT+L++ +C   +  EA  L  EMV  G+ P+ VS N +++  C+   +D 
Sbjct: 704 RPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDK 760



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 10/284 (3%)

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           AA  F +L   G  P++ T N L+  L   G   +A  +F EM +GN        P+  T
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA-----VAPDVYT 218

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++I  LC+ G +D A  +  +++   + P VVTY  L+   C +    EA  L   MV
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +  ++P++V+  +++N L +  +      +L  M    + PN   YN L+   C  G  +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF  M S G K    +YN++    CK  E+E A  + +E+   G+      +N++ 
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 340 HGLFEIRQAER---ALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
              + +R   R    L+L  EM    +  +       I  LC R
Sbjct: 399 A--WHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKR 440



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 51/257 (19%)

Query: 153 FKPNTVTYSIIIDGLC---------------KEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           F P +V  + I D  C                 G +  A + FL++     +P++ T   
Sbjct: 126 FNPLSVAAAAIADSDCTATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNI 185

Query: 198 LIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           L+         + A+ +  EM D   V P+V +  V++  LC+ G++D A  +L  + + 
Sbjct: 186 LVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERS 245

Query: 257 DVRPNAFTYNTLMDGFCLTGKIN-----------------------------------RV 281
            ++P   TYN LMD  C +G++                                     V
Sbjct: 246 GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
             +   ME  G   ++  YN LI  +C+     EAL L++E+  KGIK TVVTYN +   
Sbjct: 306 DAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKA 365

Query: 342 LFEIRQAERALKLFVEM 358
           L +  + E A ++  EM
Sbjct: 366 LCKEGEMEHAEQILDEM 382


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN V ++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLV--PNGVIFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +   L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M ++G K D  +Y ++I
Sbjct: 335 TAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN V +T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +     L+D M    ++P+  TY TL+DG C  G ++   E    M     + D+
Sbjct: 293 CKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDE 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN   + TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++   L +E+  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +   +M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLC 363



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 131 KEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLM 184

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V    +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +V  L
Sbjct: 245 PNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHL 304

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A     ++  + I+   V Y  L  GL +
Sbjct: 305 IDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQ 364

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 365 EGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDV 403



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +   +  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++   L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +         T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  V + TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 184/370 (49%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+L+    +       L L   + + G  P L TY  LINC  K G +     +
Sbjct: 237 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSL 296

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   +PNV  + S+I  LC      +A  +  ++ A GC+P++IT+NTLI GLC 
Sbjct: 297 FLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCH 356

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   A +  +E       I     PN ++Y+ +I G C  G +  A +L ++M     
Sbjct: 357 EGHVRKAEHFLRE------AIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGH 410

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVT+ +LIHG   A   +EA  +  +M ++ V P+V   NV+++ LCK   +  A  
Sbjct: 411 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKN 470

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M++ +V+P+ F Y TL+DGF  +  +   +++F  ME  G + D  S N +I GYC
Sbjct: 471 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYC 530

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +   + EA+   + +   G  P   TY T+  G  +      AL+   +M       +  
Sbjct: 531 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVV 590

Query: 369 TYRTFIDGLC 378
           TY + I+G C
Sbjct: 591 TYSSLINGYC 600



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 31/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+ CL K    + + SLF  +   GL P++  Y+ +I+  CK    +   VI
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  S   P+++TF +LI GLC E  + +A     +       PN ++Y  LI+G C 
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391

Query: 129 TGHTIVALNLFKEMTNGNGEI-----------GVVFK-------------------PNTV 158
            G  + A +L  EM  G G             G+V                     P+  
Sbjct: 392 RGELMAASDLLMEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVN 450

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y+++I GLCK+  +  AK +  +M  +N+ P+   Y +LI GF  + +  +A+ +   M
Sbjct: 451 IYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 510

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +GV+P++VS N ++   C+ G M  A   +  M +    P+ FTY T++ G+   G +
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           N        M    CK +  +Y+ LINGYCK  + + A  L+  +  + + P VVTY  L
Sbjct: 571 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
              LF+  +  RA   F  M  N  + +  T    ++GL
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 162/355 (45%), Gaps = 21/355 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F  L+  L         L + +++    +FPD+  Y++LI+  CK   +     I
Sbjct: 412 PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNI 471

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+   + +LI G      + +A  +F  ++  G  P++++ N +I G C+
Sbjct: 472 LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQ 531

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+     M     ++G +  P+  TY+ +I G  K+G ++ A      M     
Sbjct: 532 FGMMSEAILCMSNMR----KVGCI--PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 585

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVVTY+SLI+G+C   D + A+GL   M  + + PNVV+  +++  L K  K+  A  
Sbjct: 586 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 645

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF------------CLTGKINRVKELFVSMESMGCKHD 296
             + M+     PN  T + L++G             C T +++    L V  + +     
Sbjct: 646 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 705

Query: 297 D---FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           D    +YN +I   C++  + EAL   N +  KG  P  +T+ +L +G   + ++
Sbjct: 706 DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 760



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 7/307 (2%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVAL 136
           AP      +L+        + +A  +  +L+  +G  P V   N L+  L        A 
Sbjct: 130 APTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDAR 189

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L+ EM      +G     +  +  +++ GLC EG V++  +L          P+VV Y 
Sbjct: 190 KLYDEM------LGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYN 243

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LI G+C   D      LL EM  +G  P +V+   ++N L K G ++    L   M + 
Sbjct: 244 VLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR 303

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PN   YN+++D  C      +   +   M + GC  D  ++N LI G C    V +A
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 363

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                E   + + P  ++Y  L HG     +   A  L +EM G     D  T+   I G
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423

Query: 377 LCVRPQV 383
           L V  +V
Sbjct: 424 LVVAGKV 430



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 3/232 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKEL--FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           P       ++      G + KA ++   L+ +Y +L P V     L+        W++A+
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSL-PEVTHCNRLLKLLVEQRRWDDAR 189

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM+ +    +  S+ V++  LC  G+++   +L++        P+   YN L+DG+
Sbjct: 190 KLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGY 249

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G + R   L   ME+ G      +Y  LIN   K  ++E+  SL+ E+  +G+ P V
Sbjct: 250 CRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNV 309

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             YN++   L +   A +A+ +  +M  +    D  T+ T I GLC    VR
Sbjct: 310 QIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 361



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 59/327 (18%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  L+    ++++      +F+ +   G+ PD+ + + +I  +C+ G +S   +    + 
Sbjct: 487 YATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 546

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    P+  T+T++I G   +  +  A      +    C+PNV+TY++LING C+TG T 
Sbjct: 547 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 606

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF  M            PN VTY+I+I  L K+  V +A   F  M   + +PN V
Sbjct: 607 SAEGLFANMQ------AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 660

Query: 194 T--------------------------------------------------YTSLIHGFC 203
           T                                                  Y ++I   C
Sbjct: 661 TLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLC 720

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
             N   EA      M  +G  PN ++   ++   C  GK  N   +L    Q +     F
Sbjct: 721 RHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIF 780

Query: 264 TYNTLMDGFCLTG---KINRVKELFVS 287
            Y  L D +       +++RV + +++
Sbjct: 781 RYKFLFDQYATESVCCEVSRVLQQYLA 807


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 6/318 (1%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
           G++  GF     ++     P+++  TSLI+G C   +  +A  +   ++  G  P+VITY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
           N LI+G+C TG  + A  L  +M            P+ VT++I+I+ LC++G + +A ++
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRG------CSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             +M      PN ++Y  L+HGFC       A   L +M  +G  P++V+ N ++  LCK
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +GK+D A  LL+ +      P   TYNT++DG    GK ++  +L   M + G K D  +
Sbjct: 272 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIIT 331

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y+ L+ G  +  +V+EA+  +++L   G+KP  +TYN +  GL + R+ +RA+     M 
Sbjct: 332 YSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 360 GNDVAADTCTYRTFIDGL 377
                    +Y   I+GL
Sbjct: 392 QRGCKPTEASYTILIEGL 409



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 177/341 (51%), Gaps = 6/341 (1%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCF 77
           L  L +N   +      + +   G  PD+   + LI  FCK+G+      I   I  S  
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
            P+V+T+  LI G+C+  R ++A  L   +   GC P+V+T+N LIN LCR G    A++
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           + ++M            PN+++Y+ ++ G CKE  +++A E   +M      P++VTY +
Sbjct: 211 VLEKMPKHG------CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+   C     + A  LL ++  +G  P +++ N +++ L K GK D A++LLD M    
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++P+  TY++L+ G    GK++   + F  +E +G K +  +YN ++ G CK ++ + A+
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
                +  +G KPT  +Y  L  GL     A+ AL+L  E+
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 6/288 (2%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD+ TY++LI+  C  G+      +   ++R   +P+VVTF  LI  LC +  +  A
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRA 208

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +  K+   GC PN ++YN L++G C+      A+    +MT+          P+ VTY
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRG------CYPDIVTY 262

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + ++  LCK+G VD A EL  Q+  +  +P ++TY ++I G       ++A  LL EM  
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G++P++++ + ++  L + GK+D A +    +    V+PNA TYN +M G C   K +R
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             +    M   GCK  + SY ILI G       +EAL L NEL  +G+
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 9/256 (3%)

Query: 137 NLFKEMTNGNGEIGVVFK---------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           NL K + NG  E G  F          P+ +  + +I G CK G   KA  +   ++   
Sbjct: 90  NLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSG 149

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+V+TY  LI G C    W +A+ LL +MV +G  P+VV+ N+++N LC+ G +  A 
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+ M +    PN+ +YN L+ GFC   K+ R  E    M S GC  D  +YN L+   
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK+ +V+ A+ L N+L  KG  P ++TYNT+  GL ++ + ++A KL  EM+   +  D 
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329

Query: 368 CTYRTFIDGLCVRPQV 383
            TY + + GL    +V
Sbjct: 330 ITYSSLVGGLSREGKV 345



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 138/277 (49%), Gaps = 6/277 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+L+  +     +     L   +   G  P + T++ILIN  C+ G +     +
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +    PN +++  L+ G C E ++  A     K+ + GC P+++TYNTL+  LC+
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L  ++++          P  +TY+ +IDGL K G  D+A +L  +M+ + L
Sbjct: 272 DGKVDAAVELLNQLSSKG------CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+++TY+SL+ G       +EA     ++   GV+PN ++ N IM  LCK  K D A  
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
            L  MVQ   +P   +Y  L++G    G      EL 
Sbjct: 386 FLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 6/265 (2%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           P++I   +LI G C+ G T  A  +  E+   +G +     P+ +TY+++I G+C  G  
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIM-EIIEDSGAV-----PDVITYNVLISGMCSTGRW 170

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
             A++L   M     +P+VVT+  LI+  C       A  +L +M   G  PN +S N +
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPL 230

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++  CK  KM+ A   L  M      P+  TYNTL+   C  GK++   EL   + S GC
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                +YN +I+G  K  + ++A  L +E+  KG+KP ++TY++L  GL    + + A+K
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
            F +++   V  +  TY   + GLC
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLC 375



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 128/244 (52%), Gaps = 8/244 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FNIL+  L +       + + +++   G  P+  +Y+ L++ FCK  ++      
Sbjct: 187 PSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEY 246

Query: 69  FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
            G++  R C+ P++VT+ +L+  LC + ++  A  L  +L + GC P +ITYNT+I+GL 
Sbjct: 247 LGKMTSRGCY-PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G T  A  L  EM           KP+ +TYS ++ GL +EG VD+A + F  ++   
Sbjct: 306 KVGKTDQAAKLLDEMRAKG------LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN +TY +++ G C A   + A   L  MV +G +P   S  +++  L   G    A 
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419

Query: 248 RLLD 251
            LL+
Sbjct: 420 ELLN 423



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 6/219 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+N LL    K K  +  +    ++ S G +PD+ TY+ L+   CK G+V  
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  ++     +P ++T+ ++I GL    +  +AA L  +++A G +P++ITY++L+ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL R G    A+  F ++      +GV  KPN +TY+ I+ GLCK    D+A +    M 
Sbjct: 338 GLSREGKVDEAIKFFHDLE----VLGV--KPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
                P   +YT LI G  +     EA  LL E+  +GV
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%)

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           + SN  +++L +NG+++   R L+ MV     P+     +L+ GFC  GK  +   +   
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +E  G   D  +YN+LI+G C      +A  L  ++  +G  P+VVT+N L + L     
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             RA+ +  +M  +    ++ +Y   + G C
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFC 235


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 191/372 (51%), Gaps = 7/372 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  ++G   +  H      LF+ +  +G+ PD+  ++ LI+  C+ G V     +  ++
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV 242

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L+   +PN+ T    I+G C  + + EA  L   +   G  P+VITYNTLI GLC+    
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKV 301

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A +  ++M N        ++P+  TY+ IIDG CK G +  A ++     ++   P+ 
Sbjct: 302 VEAEHYLRKMVNEG------YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDE 355

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TY SLI+G C   D + A  +  E +++G++PN+V  N ++  L + G +  A +L++ 
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M +    P+ +TYN +++G C  G ++    L +   + G   D F++N LI+GYCK  +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A+ + + +   G+ P V+TYN++ +GL +  + E  +  F  M       +  TY  
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535

Query: 373 FIDGLCVRPQVR 384
             +  C   +V 
Sbjct: 536 LTESFCKARKVE 547



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 189/381 (49%), Gaps = 7/381 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L KN          +++ + G  PD +TY+ +I+ +CK+G +     I
Sbjct: 283 PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQI 342

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                   F P+  T+ SLI GLC +  I  A  +F +    G +PN++  NTL+ GL +
Sbjct: 343 LRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQ 402

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + AL L  EM+  NG       P+  TY+++I+GLCK G V  A  L +    +  
Sbjct: 403 QGLILQALKLMNEMSE-NG-----CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+ +LI G+C     + A  ++  M + GV P+V++ N I+N LCK GK ++   
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMG 516

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
              LM++    PN  TYN L + FC   K+     L   M++ G   D  ++  L+ G+C
Sbjct: 517 TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC 576

Query: 309 KNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            N +++ A  L+  +  +     T+ TYN + +          A KLF +M  N  + D+
Sbjct: 577 DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDS 636

Query: 368 CTYRTFIDGLCVRPQVRFTYA 388
            TYR  IDG C    +   Y+
Sbjct: 637 YTYRVMIDGFCKTGNINSGYS 657



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 182/349 (52%), Gaps = 7/349 (2%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            + +F+R++     P + +Y+ ++N   +         ++ R+      P+V TFT  +K
Sbjct: 95  AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMK 154

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
             C  SR   A  L   + + GCE + + Y T+I G     H + A  LF+EM      +
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM------L 208

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           G+   P+ + ++ +I  LC++G V +++ L  ++    ++PN+ T    I GFC     N
Sbjct: 209 GLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLN 268

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  LL + V +G+ P+V++ N ++  LCKN K+  A   L  MV     P+ FTYN+++
Sbjct: 269 EAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSII 327

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           DG+C  G +    ++       G   D+ +Y  LING C++ +++ A++++NE   KG+K
Sbjct: 328 DGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK 387

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           P +V  NTL  GL +     +ALKL  EM  N  + D  TY   I+GLC
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 197/468 (42%), Gaps = 98/468 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ------- 61
           P V S+N ++  L + +++D    ++ R+   G+ PD+YT++I +  FC+  +       
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168

Query: 62  ------------------VSLGFV----------IFGRILRSCFAPNVVTFTSLIKGLCA 93
                             V  GF           +F  +L     P+++ F  LI  LC 
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG-------- 145
           +  + E+  L  K+   G  PN+ T N  I G C+      A+ L   +  G        
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITY 288

Query: 146 --------------------NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
                                  +   ++P+  TY+ IIDG CK G +  A ++     +
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348

Query: 186 ENLNPNVVTYTSLIHGFCHAND-------WNEA---------------------KGLLI- 216
           +   P+  TY SLI+G C   D       +NEA                     +GL++ 
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408

Query: 217 ------EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
                 EM + G  P++ + N+++N LCK G + +A  L+   +     P+ FT+NTL+D
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+C   K++   E+   M + G   D  +YN ++NG CK  + E+ +  +  +  KG  P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            ++TYN L     + R+ E AL L  EMQ   +  D   + T + G C
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC 576



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 163/348 (46%), Gaps = 42/348 (12%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  PD  TY  LIN  C+ G +     +F   +     PN+V   +L+KGL  +  I++A
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQA 409

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             L  ++   GC P++ TYN +INGLC+ G    A NL  +     G +     P+  T+
Sbjct: 410 LKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI-AKGHL-----PDVFTF 463

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDG CK+  +D A E+  +M    ++P+V+TY S+++G C A  + +  G    M++
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI-- 278
           +G  PN+++ N++    CK  K++ A  L++ M    + P+   + TLM GFC  G +  
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDG 583

Query: 279 ----------------------------------NRVKELFVSMESMGCKHDDFSYNILI 304
                                             N  ++LF  M   G   D ++Y ++I
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           +G+CK   +    S       KG+ P++ T+  + + L   R+   A+
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAV 691



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 7/285 (2%)

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + +I EA  +F ++  F CEP+V +YN ++N L    +   A  ++  M +     G+V 
Sbjct: 89  KGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDK----GIV- 143

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+  T++I +   C+      A+ L   M  +    + V Y ++I GF   N   EA  
Sbjct: 144 -PDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE 202

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  EM+  G+ P++++ N +++ LC+ G +  + RLL+ +++  V PN FT N  + GFC
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               +N    L   +   G   D  +YN LI G CKN +V EA     ++  +G +P   
Sbjct: 263 QRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN++  G  ++   + A ++  +        D  TY + I+GLC
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLC 366



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 5/252 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    K    D  + +  R+ + G+ PD+ TY+ ++N  CK G+       
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PN++T+  L +  C   ++ EA  L  +++  G  P+V+ + TL+ G C 
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  LFK +          F     TY+I+I+    +  ++ A++LF +M     
Sbjct: 578 NGDLDGAYQLFKRVDEQ-----YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+  TY  +I GFC   + N     L+  +++G+ P++ +   ++N LC   ++  A  
Sbjct: 633 SPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVG 692

Query: 249 LLDLMVQCDVRP 260
           ++ LMV   + P
Sbjct: 693 IIHLMVHKGIVP 704



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 7/227 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++N +L  L K   Y+ V+  FK +   G  P++ TY+IL   FCK  +V  
Sbjct: 489 HGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEE 548

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLI 123
              +   +      P+VV F +L+KG C    +  A  LF ++ + +     + TYN +I
Sbjct: 549 ALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMI 608

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           N      +  +A  LF +M   NG     F P++ TY ++IDG CK G ++      L  
Sbjct: 609 NAFAGKLNMNMAEKLFNKMCE-NG-----FSPDSYTYRVMIDGFCKTGNINSGYSFLLVK 662

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
             + L P++ T+  +++  C     +EA G++  MV +G+ P VV++
Sbjct: 663 IEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNT 709



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           ++G + +A ++F +M + N  P+V +Y ++++       +++A  + + M D+G+ P+V 
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +  + M   C+  +   A RLL+ M       +A  Y T++ GF          ELF  M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
             +G   D  ++N LI+  C+   V+E+  L N++  +G+ P + T N    G  +    
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT--YARRKGNSG 395
             A++L ++  G  +  D  TY T I GLC   +V     Y R+  N G
Sbjct: 268 NEAIRL-LDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 6/214 (2%)

Query: 175 KAKELFLQMKYEN-LNPNVVTYTSLIHGFCHANDWNEAKGLLIEM---VDQGVQPNVVSS 230
           KA E+F  +K E+     ++TY  +I       ++   + +L E    +D G+   V   
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIG 81

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
              M    + GK+  A  + + M   +  P+  +YN +M+        ++  ++++ M  
Sbjct: 82  --AMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D +++ I +  +C+      A  L N +P +G + + V Y T+  G +E      
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           A +LF EM G  +  D   +   I  LC +  V+
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQ 233


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 187/367 (50%), Gaps = 31/367 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P   +FNI++  L K         + K +   GL P + TY+ LI+ + K G+    +  
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245

Query: 67  -VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            ++   + ++  +PNVVTF  LI G C ES I  A  +F +++  G   N++TY +L++G
Sbjct: 246 DMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG 305

Query: 126 LCRTGHTIVALNLFKEMT--------------NGNGEIGVV--------------FKPNT 157
           LCR G    ++ L +EM               NG  + G++               KPN 
Sbjct: 306 LCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNV 365

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           VTY+ +IDG  + G + +A      M  + ++P+V TY  LI GF  + DW    GLL E
Sbjct: 366 VTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDE 425

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M + GV+ ++V+ NV++  LC  G++  A +LLD MV+  + P   TYN +++GFC  G 
Sbjct: 426 MKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGD 485

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                ++ + ME    + +  + N+ +  +CK  +++EA  + NE+  KG+ P  +TY  
Sbjct: 486 AKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEI 545

Query: 338 LFHGLFE 344
           +  G+ E
Sbjct: 546 INSGMIE 552



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 180/373 (48%), Gaps = 10/373 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S N LL  L +    D     F+      + PD +T++I+I+  CK GQ+     +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESR---IVEAAALFTKLKAFGCEPNVITYNTLING 125
              +      P+VVT+ +LI G     R   +     L  ++   G  PNV+T+N LING
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+  +   A+ +F+EM             N VTY+ ++ GLC+EG V+ + +L  +M+ 
Sbjct: 271 YCKESNITAAIKVFEEMRQHG------IPANMVTYTSLVSGLCREGKVEDSMKLVEEMEE 324

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             L   + T  S+++GFC      EA+G +  M  +G++PNVV+ N +++   + GKM  
Sbjct: 325 LGL-ATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKE 383

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A+     M    + P+  TYN L+ GF  +     V  L   M+  G K D  +YN+LI 
Sbjct: 384 ATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIG 443

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             C   EV +A+ L +E+   G++P   TYN + +G  E   A+ A  + + M+     A
Sbjct: 444 ALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRA 503

Query: 366 DTCTYRTFIDGLC 378
           +  T   F+   C
Sbjct: 504 NVVTCNVFLKYFC 516



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           + P+  +  +L+  L    R+  A   F         P+  T+N +I+GLC+TG    A 
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK---AKELFLQMKYENLNPNVV 193
           ++ K+M       G    P+ VTY+ +IDG  K G   K      L  +M    ++PNVV
Sbjct: 209 DVAKDMR------GWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVV 262

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+  LI+G+C  ++   A  +  EM   G+  N+V+   +++ LC+ GK++++ +L++ M
Sbjct: 263 TFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEM 322

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +     T N++++GFC  G +   +     M   G K +  +YN LI+GY +  ++
Sbjct: 323 EELGL-ATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKM 381

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA +    +  KGI P V TYN L  G            L  EM+   V AD  TY   
Sbjct: 382 KEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVL 441

Query: 374 IDGLCVRPQVR 384
           I  LC + +VR
Sbjct: 442 IGALCCKGEVR 452



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 147/352 (41%), Gaps = 90/352 (25%)

Query: 9   PPVSSFNILL------GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           P V ++N L+      G   K  H D    L K +N  G+ P++ T+++LIN +CK   +
Sbjct: 221 PSVVTYNTLIDGYYKWGRAGKMYHVDM---LLKEMNQAGISPNVVTFNVLINGYCKESNI 277

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------- 97
           +    +F  + +     N+VT+TSL+ GLC E ++                         
Sbjct: 278 TAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSVL 337

Query: 98  ---------VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG- 147
                    VEA      +   G +PNV+TYNTLI+G  R G         KE T   G 
Sbjct: 338 NGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGK-------MKEATAAKGA 390

Query: 148 -------------------------------------EIGVVFKPNTVTYSIIIDGLCKE 170
                                                E GV  K + VTY+++I  LC +
Sbjct: 391 MAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGV--KADLVTYNVLIGALCCK 448

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G V KA +L  +M    L P   TY ++I+GFC   D   A  + I M     + NVV+ 
Sbjct: 449 GEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTC 508

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           NV +   CK GKMD A+ +L+ M++  + PN  TY  +  G    G +  ++
Sbjct: 509 NVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIR 560



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 4/203 (1%)

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L     Y    P+  +  +L+     A+  + A+      + + V P+  + N++++ LC
Sbjct: 140 LLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLC 199

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF---CLTGKINRVKELFVSMESMGCKH 295
           K G++  A  +   M    + P+  TYNTL+DG+      GK+  V  L   M   G   
Sbjct: 200 KTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISP 259

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           +  ++N+LINGYCK   +  A+ ++ E+   GI   +VTY +L  GL    + E ++KL 
Sbjct: 260 NVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLV 319

Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
            EM+   +A    T  + ++G C
Sbjct: 320 EEMEELGLAT-LPTLNSVLNGFC 341


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLD-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A     +M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +   L   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  + G     LN    + N     GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 173 SFNTLMNGYIKLGD----LNEGFRLKNAMQASGV--QPDVYTYSVLINGLCKESKMDDAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M    L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+K  + TY  + +   +        KL  E
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+    D NE   L   M 
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLC 357



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 134/265 (50%), Gaps = 6/265 (2%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N L++  C+ G   +A ++F  +T          +P+ V+++ +++G  K G +++   
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLMNGYIKLGDLNEGFR 192

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN V+   +++  C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M   G K D  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  A K+  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
               +  +  TY   I+  C +  V
Sbjct: 373 LSVGLKLEIGTYTMIINEFCKKGDV 397



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +MN   K G ++   RL + M    
Sbjct: 142 LMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 116/231 (50%)

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           + +   +S +I    + GF+  A E     K         T   ++        +    G
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              E ++ G   ++   N++M+  CK G++  A  + D + +  +RP+  ++NTLM+G+ 
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G +N    L  +M++ G + D ++Y++LING CK  ++++A  L++E+   G+ P  V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           T+ TL  G  +  + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +++N L+   A+        ++ + + + G  PDL+TY++L    C+ G+V   F +
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 337

Query: 69  FGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
              +   S  +P+VVT+ +L+       R  +A  L  +++  G + +++T+N ++ GLC
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLC 397

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G    AL   K MT    E G+   P+ +TY+ +ID  CK   V KA  L  +M    
Sbjct: 398 REGQLEEALGRLKMMT----EEGLA--PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L  +  T  +L++  C    + EA+ LL     +G  P+ VS   +M    K  K + A 
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L D M +  + P+ +TYNTL+ G C  GK+    +    +   G   DD +YNI+I+ Y
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  ++E+A   +N++     KP VVT NTL +GL    + E+A+KLF          D 
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV 631

Query: 368 CTYRTFIDGLC 378
            TY T I  LC
Sbjct: 632 ITYNTLIQALC 642



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 180/370 (48%), Gaps = 6/370 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H+    P V ++N L+    K +     L+L + +   G+   L T++I++   C+ G
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+         +     AP+V+T+ +LI   C    + +A  L  ++   G + +  T N
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLN 460

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TL+  LC+      A  L +            F P+ V+Y  ++    KE   + A  L+
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRG------FVPDEVSYGTVMAAYFKENKPEPALYLW 514

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L P++ TY +LI G C      EA   L E++ +G+ P+  + N+I++  CK 
Sbjct: 515 DEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE 574

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G ++ A +  + M++   +P+  T NTLM+G CL GK+ +  +LF S    G K D  +Y
Sbjct: 575 GDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITY 634

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI   CK+ +V+ AL  + ++  +G++P   TYN +   L E  ++E A  +  ++  
Sbjct: 635 NTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694

Query: 361 NDVAADTCTY 370
           +   ++  +Y
Sbjct: 695 SGKLSERFSY 704



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 186/385 (48%), Gaps = 40/385 (10%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS--LGFVIFGRILRSCFAPNVVTFTSL 87
           +L  F+R   +   P L   + +++   +    S      +F  ++     PN  TF  L
Sbjct: 159 LLHSFRRRGHVR--PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLL 216

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM----- 142
           +   C++  + +A +  + ++ FG  P+V+TYNTL+   CR G    A  L   M     
Sbjct: 217 VHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGI 276

Query: 143 ----------TNGNGEIGVV--------------FKPNTVTYSIIIDGLCKEGFVDKAKE 178
                      +    +G +              F+P+  TY+++  GLC+ G VD+A +
Sbjct: 277 APTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFK 336

Query: 179 LFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           L  +M++ ++ +P+VVTY +L+         ++A  LL EM D+GV+ ++V+ N+++  L
Sbjct: 337 LKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGL 396

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM---GCK 294
           C+ G+++ A   L +M +  + P+  TYNTL+D +C   K   V + FV M+ M   G K
Sbjct: 397 CREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC---KARNVAKAFVLMDEMVRSGLK 453

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D F+ N L+   CK K  EEA  L    P +G  P  V+Y T+    F+  + E AL L
Sbjct: 454 MDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYL 513

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCV 379
           + EM    +     TY T I GLC 
Sbjct: 514 WDEMSKRKLTPSIYTYNTLIKGLCT 538



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 183/413 (44%), Gaps = 45/413 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + NI++  L +    +  L   K +   GL PD+ TY+ LI+ +CK   V+  FV+   +
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALF----------------TKLKAFGCE--- 113
           +RS    +  T  +L+  LC E R  EA  L                 T + A+  E   
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 114 ----------------PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                           P++ TYNTLI GLC  G    A++   E+       G+V  P+ 
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK----GLV--PDD 561

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            TY+III   CKEG ++KA +   +M      P+VVT  +L++G C      +A  L   
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
             ++G + +V++ N ++  LCK+G +D A      M    ++P+AFTYN ++      G+
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP--TVVTY 335
               + +   ++  G   + FSY  LI    +  +  +   + ++    G        +Y
Sbjct: 682 SEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESY 740

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
           N     L    Q + A  +  EM    ++ D+ TY T ++GL  R Q R T+A
Sbjct: 741 NKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKR-QKRQTHA 792



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L+PN  T+  L+H  C      +A   L  M   G+ P+VV+ N ++   C+ G +  A 
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            LL  M +  + P   TYNTL+  +   G I +   +  +M + G + D ++YN+L  G 
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325

Query: 308 CKNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           C+  +V+EA  L +E+    I  P VVTYNTL    F+ +++  AL L  EM+   V + 
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385

Query: 367 TCTYRTFIDGLCVRPQVRFTYARRK 391
             T+   + GLC   Q+     R K
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLK 410


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 194/382 (50%), Gaps = 10/382 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R++ P+   +++   L+  L K       + L+ RL   G  P++ T + LI+  CK G
Sbjct: 459 LRNLRPNDGLLTT---LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +   +L      + +T+ +LI G C E ++ E   L  ++   G +P++ T+N
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L++GLC       A  L+ E    NG     + PN  TY ++IDG CK   V++ + L 
Sbjct: 576 LLLHGLCNADKIDEASRLWHECKK-NG-----YVPNVYTYGVMIDGYCKANKVEEGENLL 629

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            ++  + L  N V Y SLI  +C   + N A  L  +M  +GV  +  + + +M+ LC  
Sbjct: 630 NELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNI 689

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G +D+A  LLD M +  + PN   Y T++ G+   G++N+V  +   M S     + F+Y
Sbjct: 690 GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTY 749

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
            I+I+G+CK  + +EA  L NE+  KGI P  VTYN   +GL +  + E A K+  EM  
Sbjct: 750 TIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS 809

Query: 361 NDVAADTCTYRTFIDGLCVRPQ 382
             V  D  TY T IDG C +P 
Sbjct: 810 GAVCLDEITYTTLIDG-CHQPS 830



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 193/411 (46%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +   LL  L K         ++  +   G+ PD++ +S +IN FCK  +      +
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   APNVVT+ ++I GLC   R+ EA     K+      P++ITY+  INGL +
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  + KEM+    E+G  F PN V Y+ +IDG CK G + +A ++   M  + +
Sbjct: 339 LEKIDEANCVLKEMS----ELG--FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE------------ 236
           +PN VT  SLI GFC ++   +A+ +L EM+ +G+  N  S ++++N             
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 237 -----------------------LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                  LCK GK   A  L   ++     PN  T N L+ G C
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G +    +L   M   G   D  +YN LI+G CK  +V+E   L  E+  KGI+P + 
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           T+N L HGL    + + A +L+ E + N    +  TY   IDG C   +V 
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVE 623



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 41/417 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  F+ ++    K    D  + LF ++  +G+ P++ TY+ +I+  CK G++   +  
Sbjct: 254 PDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++   +P+++T++  I GL    +I EA  +  ++   G  PN + YNTLI+G C+
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-------- 180
            G+   AL +  +M +          PN+VT + +I G CK   + +A+ +         
Sbjct: 374 MGNISEALKIRDDMLSKG------ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427

Query: 181 ---------------------------LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
                                       +M   NL PN    T+L+ G C A    EA  
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVE 487

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L   ++ +G  PN+V+SN +++ LCK G M    +LL  M++  +  +  TYNTL+ G C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             GK+    EL   M   G + D +++N+L++G C   +++EA  L++E    G  P V 
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           TY  +  G  +  + E    L  E+    +  ++  Y + I   C+   +   +  R
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLR 664



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 177/380 (46%), Gaps = 6/380 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P    SF++++  L     + T L   + +    L P+    + L++  CK G+      
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVE 487

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R+L   F PN+VT  +LI GLC    + E   L   +   G   + ITYNTLI+G C
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G       L +EM           +P+  T+++++ GLC    +D+A  L+ + K   
Sbjct: 548 KEGKVKEGFELKEEMVKKG------IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG 601

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PNV TY  +I G+C AN   E + LL E+V + ++ N V  N ++   C NG M+ A 
Sbjct: 602 YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAF 661

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL D M    V  +  TY++LM G C  G ++  K L   M   G   +   Y  +I GY
Sbjct: 662 RLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGY 721

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  ++ +   +  E+    I P   TY  +  G  ++ + + A KL  EM    +  D 
Sbjct: 722 SKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDA 781

Query: 368 CTYRTFIDGLCVRPQVRFTY 387
            TY  F +GLC   +V   +
Sbjct: 782 VTYNAFTNGLCKEGKVEEAF 801



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 82/161 (50%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           +  +G+ P++ +   +++ L K  ++  +  + D +    + P+   ++T+++ FC   +
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    LF  ME +G   +  +YN +I+G CK+  ++EA     ++  + + P+++TY+ 
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             +GL ++ + + A  +  EM       +   Y T IDG C
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC 372


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 173/362 (47%), Gaps = 29/362 (8%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N ++  L ++   +     F  + ++GL PD+ TY+ L+N +CK G +    ++
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            FG + R+  AP V+T+  LI G C    + EA  L  ++   GC PNV TY  L+ G   
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 1342

Query: 129  TGHTIVALNLFKEMTNGN------------------GEIGVVFK-----------PNTVT 159
                 +A   F EM +                    G+I   F+            +TVT
Sbjct: 1343 VRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVT 1402

Query: 160  YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            Y+I+I GLCK G +  AKEL ++M    L P+ +TYT LIH  C      EA+ +   M+
Sbjct: 1403 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462

Query: 220  DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
              G+ P+ V+  VI++  C+ G + +A      M++  V PN  TYN L+   C  G+  
Sbjct: 1463 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 1522

Query: 280  RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
                 F  M   G   + ++Y +LI+G CK    E+A+  Y E+   GI P  +T+  L 
Sbjct: 1523 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582

Query: 340  HG 341
             G
Sbjct: 1583 KG 1584



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 199/442 (45%), Gaps = 79/442 (17%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS--IGLFPDLYTYSILINCFCKMGQVSLGF 66
            P + ++N LL    K    D V  L K + +   G  P+  TY+++I    + G +    
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 67   -------------------VIFGRILRSC---------------FAPNVVTFTSLIKGLC 92
                               +I G + R C                 P VVT+ ++I GL 
Sbjct: 1177 ELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 1236

Query: 93   AESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
             +S +VEAA + F +++A G  P+VITYN+L+NG C+ G+   AL LF ++         
Sbjct: 1237 -QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG----- 1290

Query: 152  VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
               P  +TY+I+IDG C+ G +++A+ L  +M  +   PNV TYT L+ G  +      A
Sbjct: 1291 -LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 212  KGLLIEMVDQGVQPN-----------------------------------VVSSNVIMNE 236
            +    EM+ +G+QP+                                    V+ N++++ 
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 237  LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            LCK G + +A  L   MV   ++P+  TY  L+   C  G +   +++F +M S G    
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 297  DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
              ++ ++I+ YC+   +  A   + ++  +G++P  +TYN L H L  + + + A   F 
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 357  EMQGNDVAADTCTYRTFIDGLC 378
            EM    + A+  TY   IDG C
Sbjct: 1530 EMLERGLVANKYTYTLLIDGNC 1551



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 9/382 (2%)

Query: 5    HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
            H   P V   N +L  L     +D + ++ + +  +G+ P + TY+ L++ F K G+   
Sbjct: 1078 HGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDK 1137

Query: 65   GFVIFGRILR--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              ++   +    S   PN VT+  +I GL  +  + EAA L   ++    + +  TYN L
Sbjct: 1138 VAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPL 1196

Query: 123  INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
            I GL   G      +L  EM N     G++  P  VTY+ +I GL + G V+ A+  F +
Sbjct: 1197 ITGLLARGCVKKVYDLQLEMENE----GIM--PTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 183  MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
            M+   L P+V+TY SL++G+C A +  EA  L  ++   G+ P V++ N++++  C+ G 
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 243  MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            ++ A  L + M +    PN  TY  LM G      +   +E F  M S G + D F+YN 
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370

Query: 303  LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
             I       ++  A  L   L  +GI    VTYN L HGL +    + A +L ++M  N 
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430

Query: 363  VAADTCTYRTFIDGLCVRPQVR 384
            +  D  TY   I   C R  +R
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLR 1452



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 43/335 (12%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V ++N LL    K  +    L LF  L   GL P + TY+ILI+ +C++G +    ++
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317

Query: 69   FGRILRSCFAPNVVTFTSLIKG--------------------------------LCAE-- 94
               +      PNV T+T L+KG                                +CAE  
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 1377

Query: 95   -SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL-FKEMTNGNGEIGVV 152
               I  A  L   L   G   + +TYN LI+GLC+TG+   A  L  K ++NG       
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG------- 1430

Query: 153  FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             +P+ +TY+ +I   C+ G + +A+++F  M  + L P+ VT+T +IH +C   +   A 
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490

Query: 213  GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            G   +M+++GV+PN ++ NV+++ LC+ G+   AS     M++  +  N +TY  L+DG 
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGN 1550

Query: 273  CLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            C  G        +  M   G   D  ++  L+ G+
Sbjct: 1551 CKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 3/201 (1%)

Query: 180  FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
            F +M    + P+V     ++     A  W++   +  EM++ G++P++V+ N +++   K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 240  NGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
             G+ D  + LL  M        PN  TYN ++ G    G +    EL   M  +  K   
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 1190

Query: 298  FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            F+YN LI G      V++   L  E+  +GI PTVVTYN + HGL +    E A   F E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 358  MQGNDVAADTCTYRTFIDGLC 378
            M+   +  D  TY + ++G C
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYC 1271


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K+++ V + ++ +   G    LY ++IL++ FCK G + L
Sbjct: 95  HKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF+EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFEEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEVYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C     N+A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLD 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S G K D  +Y ++I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V +   L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 6/318 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           ++    K+   +L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G
Sbjct: 107 MLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 166

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             P+V++YNTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE 
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLNEGFKL-KSAMHASG-----VQPDVYTYSVLINGLCKES 220

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +D A ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N
Sbjct: 221 KMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYN 280

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++  LCK G ++ A  L+D M    ++P+  TY TL+DG C  G ++   E    M   
Sbjct: 281 TLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQE 340

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
             + DD +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     + 
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKG 400

Query: 352 LKLFVEMQGNDVAADTCT 369
            KL  EMQ +  A    T
Sbjct: 401 SKLLKEMQRDGHAPSVVT 418



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 118/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV+Y +L++G+    D NE   L   M 
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L + M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK   + +A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 357



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 160/339 (47%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +++ L          A +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+Y+ ++
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG------LRPSVVSYNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +++  +L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 179 NGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G +N+  +L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 299 MDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  DT TY   I+  C +  V
Sbjct: 359 EGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDV 397



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 8/228 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF+ +   GL P+  T++ LI+  CK G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V L   ++ ++L     P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 257 VDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQEN------IRLDDVAYTALISGLCQEGRSVDAEKMMR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D  +   LL EM   G  P+VV+
Sbjct: 371 EMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G ++   +L   M    
Sbjct: 142 LMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +     +A  L  EM    +  D  TY T IDG 
Sbjct: 262 EVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGC 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLDTAFEHRK 335


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 8/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++NIL+  L + +     L+L++++N  G+ P + TY  L+ C+C  G +     +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +    F PNVVT+T+L+KG   ++   +A AL  ++K  G   N  TYNTLINGLC 
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G       + K   T G       F P  +TY+ II+G  K G +  A  ++ QM  + 
Sbjct: 504 VGRVCEVGEMLKRFETEG-------FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN+VTYTS I G+C  +  + A  +L ++  +G++P++ + N ++   C+ G M +A 
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L LM++  + PN   YN+ + G+     +     L+  M   G   D  +Y  LI+G+
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGF 676

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K+  V  AL LY+E+  KG  P  +T+  L HGL      + A KL  EM   D+  + 
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736

Query: 368 CTYRTFIDG 376
             Y   I+G
Sbjct: 737 LMYNMLING 745



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 182/370 (49%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + FN+++  L  +K +   +SLFK +   G+ PD +TY+ILI+  C+  ++     +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++  +   P +VT+ SL+   C    + EA  L+T++   G  PNV+TY TL+ G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM   NG        N  TY+ +I+GLC  G V +  E+  + + E  
Sbjct: 469 KAAFDKAYALLAEMKQ-NG-----VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  +TY S+I+GF  A     A  +  +M  +G+ PN+V+    ++  CK    D A +
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +    +RP+   YN+L+ GFC  G ++   ++ V M   G   +   YN  I GY 
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K +EEAL LY ++  +GI     TY TL  G  +      ALKL+ EM       D  
Sbjct: 643 NLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 369 TYRTFIDGLC 378
           T+     GLC
Sbjct: 703 TFTALTHGLC 712



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 7/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K    +  L +   L + G    +   + L++ +C   +V     IF   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           LR    P  VT+T LI+G   E    +A  L  +++  G  P+   +N +I GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++LFKEM +     G+   P+  TY+I+I  LC+   + +A  L+ +M    + P +
Sbjct: 369 KDAVSLFKEMADS----GI---PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY SL+  +C     +EA  L  EM  +G  PNVV+   +M         D A  LL  
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M Q  V  N +TYNTL++G C+ G++  V E+    E+ G      +YN +ING+ K   
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A ++Y ++  KGI P +VTY +   G  +    + ALK+  +++   +  D   Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 373 FIDGLC 378
            I G C
Sbjct: 602 LIFGFC 607



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 177/400 (44%), Gaps = 42/400 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++++    K   YD  + LF  + +  + PD    S+ I   CK+   +   ++  ++ 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            + F P   TF S++  L    R+ EA  +  +L A G + +V+   TL++G C      
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL++F+E        G+V  P  VTY+++I G  +EG  +KA EL  QM+   L P+  
Sbjct: 300 KALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK-------------- 239
            +  +I G  +   W +A  L  EM D G+ P+  + N++++ LC+              
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 240 ---------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                NG MD A +L   M      PN  TY TLM G       
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++   L   M+  G   +D++YN LING C    V E   +      +G  PT +TYN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G  +      A  ++ +M    +  +  TY +FIDG C
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYC 572



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 179/392 (45%), Gaps = 42/392 (10%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L +F+     GL P   TY++LI    + G     + +  ++      P+   F  +IK
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           GL  +    +A +LF ++   G  P+  TYN LI+ LC+      ALNL+++M     E 
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMN----ET 415

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           GV  KP  VTY  ++   C  G +D+A +L+ +M  +   PNVVTYT+L+ G  +   ++
Sbjct: 416 GV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  LL EM   GV  N  + N ++N LC  G++     +L         P A TYN+++
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +GF   G +     ++  M + G   +  +Y   I+GYCK    + AL + N++  KG++
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLR 593

Query: 330 PTVVTYNTLFHGLFE-----------------------------------IRQAERALKL 354
           P +  YN+L  G  +                                   ++  E AL+L
Sbjct: 594 PDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRL 653

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           + +M    +  DT TY T IDG      V F 
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 6/292 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L        V  + KR  + G  P   TY+ +IN F K G +   F ++ ++
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN+VT+TS I G C  S    A  +   ++  G  P++  YN+LI G C+ G+ 
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL +   M            PN   Y+  I G      +++A  L+ +M  E ++ + 
Sbjct: 613 SHALQVLVLMLKDG------LLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDT 666

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI GF    +   A  L  EMV +G  P+ ++   + + LC+NG +D+A +LLD 
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           M + D+RPN   YN L++G+   GK+     L   M       DD +Y+IL+
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 7/339 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D + + +++    K G       +F  +  S   P+    +  I  LC       A  + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            K++  G  P   T+N++++ L + G    AL++  E+     ++ VV        + ++
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA------TTLM 289

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            G C +  V KA ++F +   + L P  VTYT LI G        +A  L  +M D G+ 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+    N+++  L  +    +A  L   M    + P+AFTYN L+   C   KI     L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M   G K    +Y+ L+  YC N  ++EA+ LY E+P KG  P VVTY TL  G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               ++A  L  EM+ N V+ +  TY T I+GLCV  +V
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRV 507



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 1/225 (0%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           + +++    KEG  D A  LF +M    + P+    +  I   C   D N A  +L +M 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D G  P   + N +++ L K G+M+ A  + D ++    + +     TLM G+CL  ++ 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +  ++F      G    D +Y +LI G  +    E+A  L  ++   G+ P+   +N + 
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            GL   +  + A+ LF EM  + +  D  TY   I  LC R ++R
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIR 403



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%)

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M+   + P+  + T L+     +    +A  LL EM  +G   +    +V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             D+A RL D M   ++ P+    +  +   C     NR   +   M+  G    DF++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +++   K   +EEAL + +EL   G K +VV   TL HG    R+  +AL +F E   +
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 362 DVAADTCTYRTFIDG 376
            +     TY   I G
Sbjct: 312 GLVPTDVTYTVLIRG 326



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 51/112 (45%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++  L+   +K+ +    L L+  + + G  PD  T++ L +  C+ G +     +   
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           + R    PNV+ +  LI G     ++ EA  L  ++      P+  TY+ L+
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 194/371 (52%), Gaps = 11/371 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL  LA+    D +  L+  +    +  D+YT++++IN +CKMG V        +++
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           ++  +P+  T TS I G C    +  A  +F ++       N ++YN LI+GLC  G   
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP----NRNEVSYNQLIHGLCEAGRID 275

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A++LF  M +          PN  TY+ +I GLC++  V KA  L  +M   NL P+++
Sbjct: 276 EAVSLFVRMKDD------CCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLI 328

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY SLI G C A   + A  LL  M ++G+ P+  +    ++ LCK+ +++ A RL D +
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  V  N   Y+ L+DG+C  GK++    LF  M S  C  + +++N LI+G C    +
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EALSL++++   G+KPTV T+N L   + +    + A K   +M  +       TY  F
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508

Query: 374 IDGLCVRPQVR 384
           I+  C   +V+
Sbjct: 509 IEVYCSAGKVQ 519



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 187/395 (47%), Gaps = 36/395 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N L+  L +    D  +SLF R+     +P++YTY+ LI   C+   V     +   +
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEM 318

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L     P+++T+ SLI G C    +  A  L + +K  G  P+  TY   I+ LC++   
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF  +T    E GV    N + YS++IDG CK G VD+A  LF +M  +N +PN 
Sbjct: 379 EEARRLFDSLT----EEGV--SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNA 432

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T+ +LIHG C A +  EA  L  +MV  G++P V + N+++  + K G  D+A + L  
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQK 492

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+    +P A TYN  ++ +C  GK+   +++ V M+  G   DDF+Y  LI  Y K   
Sbjct: 493 MMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGL 552

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR-------------------------- 346
              A  +   +     +P+  T+ +L   LF+ R                          
Sbjct: 553 TYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW 612

Query: 347 ---QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              + +  ++LF EM+ +    D+  Y   I G+C
Sbjct: 613 KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGIC 647



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 173/364 (47%), Gaps = 11/364 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + +FN+++    K            ++   GL PD +T +  I  +C+   V   F +F 
Sbjct: 192 IYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFE 251

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +       N V++  LI GLC   RI EA +LF ++K   C PNV TY  LI GLCR  
Sbjct: 252 EMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK- 306

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           +   A+ L  EM   N        P+ +TY+ +I G C+ G +D A  L   MK   L P
Sbjct: 307 NVHKAMGLLDEMLERN------LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +  TY   I   C +N   EA+ L   + ++GV  NV+  +V+++  CK GK+D A  L 
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+  +  PNA+T+N L+ G C  G +     LF  M  MG K   +++NILI    K 
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            + ++A     ++   G KP   TYN          + + A  + V+M+   V  D  TY
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 371 RTFI 374
            + I
Sbjct: 541 TSLI 544



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 11/313 (3%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           L  Y+ L+    + G V     ++  +L    + ++ TF  +I   C    + EA     
Sbjct: 157 LKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMC 216

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           K+   G  P+  T  + I G CR+     A  +F+EM N           N V+Y+ +I 
Sbjct: 217 KMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----------NEVSYNQLIH 266

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLC+ G +D+A  LF++MK +   PNV TYT+LI G C  N  ++A GLL EM+++ + P
Sbjct: 267 GLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVP 325

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++++ N ++   C+ G +D+A RLL LM +  + P+  TY   +D  C + ++   + LF
Sbjct: 326 DLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLF 385

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            S+   G   +   Y++LI+GYCK  +V+EA  L+ ++  K   P   T+N L HGL   
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445

Query: 346 RQAERALKLFVEM 358
              + AL LF +M
Sbjct: 446 GNLKEALSLFDQM 458



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 185/433 (42%), Gaps = 70/433 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    +  H D+   L   +   GL PD  TY   I+  CK  +V     +
Sbjct: 325 PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRL 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     + NV+ ++ LI G C   ++ EA  LF K+ +  C PN  T+N LI+GLC 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL+LF +M      + +  KP   T++I+I  + K+G  D A +   +M     
Sbjct: 445 AGNLKEALSLFDQM------VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TY + I  +C A    EA+ ++++M ++GV P+  +   ++    K G   +A  
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFD 558

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF----------CLTG-------------------KIN 279
           +L  M   D  P+  T+ +L+               TG                   + +
Sbjct: 559 VLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFD 618

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN--- 336
            V ELF  ME  GC  D   Y  LI+G CK + +  AL L +++  +GI P+ + +N   
Sbjct: 619 IVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVI 678

Query: 337 --------------------------------TLFHGLFEIRQAERALKLFVEMQGNDVA 364
                                           TL  GL+E  + ER   +F +++G    
Sbjct: 679 SCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYN 738

Query: 365 ADTCTYRTFIDGL 377
            D   ++  IDG+
Sbjct: 739 DDEIAWKILIDGM 751



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 153/363 (42%), Gaps = 35/363 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN L+  L    +    LSLF ++  +GL P +YT++ILI    K G        
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S   P   T+ + I+  C+  ++ EA  +  ++K  G  P+  TY +LI    +
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV--------------- 173
            G T  A ++ K M + + E      P+  T+  +I  L  + +V               
Sbjct: 550 LGLTYSAFDVLKSMFDADCE------PSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNF 603

Query: 174 --------------DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
                         D   ELF +M+     P+   Y  LI G C   +   A  LL +M 
Sbjct: 604 GDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQ 663

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+ +  N +++  CK  K   A+ +++ M+     P      TL+ G    G+  
Sbjct: 664 KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETE 723

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           R   +F  +   G   D+ ++ ILI+G  K   VEE   L+ E+   G   +  TY+ L 
Sbjct: 724 RGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILT 783

Query: 340 HGL 342
             L
Sbjct: 784 QKL 786



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 6/163 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    +  L+  + K ++    L L  ++   G+ P    ++ +I+C CK+ +   
Sbjct: 630 HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGE 689

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              I   ++ S  +P +    +LI GL  E       ++F KL+  G   + I +  LI+
Sbjct: 690 AANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILID 749

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           G+ + G       LF+EM       G  F P   TYSI+   L
Sbjct: 750 GMLKQGLVEEFSQLFEEMEKN----GCNFSPR--TYSILTQKL 786


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 200/440 (45%), Gaps = 64/440 (14%)

Query: 2   RHMHPSPP--PVSSFNILLGCLAKNKHYDTVLSLFKRLNS-------------------- 39
           R + PS P  P+   N LL  LA+++ +  + SL  R+ +                    
Sbjct: 30  RVLSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIP 89

Query: 40  -----------IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI-LRSCFAPNVVTFTSL 87
                       GL PD Y Y+  +  +C+ G ++    +F  + LR C      T+T+L
Sbjct: 90  AAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTAL 148

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT--------------- 132
           + GL     + EA  +F  ++A  C P+   Y T+++GLC  G T               
Sbjct: 149 LHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 133 ---IVALNLFKEMTNGNGEIGVVFK-----------PNTVTYSIIIDGLCKEGFVDKAKE 178
              IV  N   +     GE+    K           PN  TY+ +I GLCK G V++A  
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           LF +M    L PNVVTYT+LI G C+      A  LL  M   G+ PN  + +V+++ LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K  K++ A   L  +V+  V+ N   Y +L+DG C TGKI+   EL   M S G   D  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY+ LI+G C+ K++ +A  +  ++  KGI+ + VTY  +   L     +E   K+F +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 359 QGNDVAADTCTYRTFIDGLC 378
               +  D  TY  F+   C
Sbjct: 449 IATGINPDIVTYTVFVRSYC 468



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  LL  L         +++F  + +    PD + Y+ +++  C+ G+     V+    
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           + + F PN+V + +LI G C    +  A  +F  +    C PNV TY  LI+GLC++G  
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+ LF  M           +PN VTY+ +I G C EG +  A  L   M+   L PN 
Sbjct: 264 ERAMVLFSRMVEAG------LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T++ LI   C      EA+  L  +V +GV+ N V    +++ LCK GK+D A  L+  
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+     P+A +Y++L+DG C   K+++   +   M   G +    +Y I+I+   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            E    +++++   GI P +VTY        E  + E A  + V+M    V  +  TY T
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 373 FIDG 376
            I G
Sbjct: 498 LIRG 501



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 181/367 (49%), Gaps = 8/367 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+         +  L +F+ ++     P++ TY+ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R++ +   PNVVT+T+LI+G C E  +  A  L   ++  G  PN  T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
               +    LF       G      K N V Y+ +IDGLCK G +D A EL  +M  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  +Y+SLI G C     ++A  +L +M+++G+Q + V+  +I++EL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+   + P+  TY   +  +C  G++   + + V M   G   +  +YN LI GY 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF--VEMQGNDVAAD 366
               V +A S +  +  KG KP   +Y  L   + +   ++ ++ ++   +M+   V  +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 367 TCTYRTF 373
             T R  
Sbjct: 564 DITERQL 570



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 10/306 (3%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           P +    +L+  L       +  +L +++ A     N+ TY TLIN  C  G    A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
              + +          P++  Y+  + G C+ G +  A  +F+ M          TYT+L
Sbjct: 95  LTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTAL 148

Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           +HG   A    EA  + + M      P+      +++ LC+ G+ + A  LL+  +    
Sbjct: 149 LHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
            PN   YN L+DG+C  G++    ++F  M+   C  +  +Y  LI+G CK+ +VE A+ 
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L++ +   G++P VVTY  L  G       + A +L   M+ N +  +  T+   ID LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 379 VRPQVR 384
            R +V 
Sbjct: 329 KREKVE 334



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 88/268 (32%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV------ 67
           +  L+  L K    D    L +++ S G  PD ++YS LI+  C+  ++S   +      
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 68  -----------------------------IFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                                        IF +++ +   P++VT+T  ++  C E R+ 
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           +A ++  ++   G  PN++TYNTLI G    G    A + F+ M      +G  +KPN  
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM------VGKGWKPNED 528

Query: 159 TYSII-----------------------------------------------IDGLCKEG 171
           +Y+++                                               I  LC+  
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLI 199
            +++AK  F+ M+  NL P+   YTS+I
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%)

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           N+ +   ++N  C  G +  A + L  ++   + P+++ Y + + G+C  G +     +F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           V M   GC    F+Y  L++G      V EA++++  +      P    Y T+ HGL E 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGN 396
            + E A  L  E   N    +   Y   IDG C   ++       +G  GN
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+  +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A   F EM       G+V  PN VT++ +IDG CK G VD AKE++ QM 
Sbjct: 221 GLCKESKMDDANEXFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAKEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ +M  +G++P+ ++   ++B  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M S+  K D  +Y ++I
Sbjct: 335 SAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           + NTL+NG  R G       L K +   +G      +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SXNTLMNGYIRLGDLDEGFRL-KSVMLASG-----VQPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           E F +M  + L PN VT+T+LI G C     + AK +  +M+ Q + P++++ N ++  L
Sbjct: 233 EXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+BG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+     +A  +  E+    +KP   TY  + +   +     +  KL  E
Sbjct: 353 VVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +  A    TY   ++G
Sbjct: 413 MQRDGHAPSVVTYNVLMNG 431



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+  +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+   D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             KE++  M S     D  +YN LI G CK  ++++A  L +++  KG+KP  +TY TL 
Sbjct: 265 LAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 BGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLC 363



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+ + +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSXNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A     EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LIBG CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVRLKPDTGTYTMIINEFCKKGDV 403



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL  +M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   E F  M   G   +  ++  LI+G+CKN  V+ A 
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAK 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  +M    +  D  TY T IBG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDSAFEHRK 341



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 132/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  + NTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M + G + D ++Y++LING CK  ++++A   ++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A +++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 181/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K +++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 83  HKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 142

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLIN 202

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G++  PN VT++ +IDG CK G VD A E++ +M 
Sbjct: 203 GLCKESKMDDANELFDEMLVK----GLI--PNGVTFTTLIDGHCKNGRVDLAMEIYKRML 256

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 257 SQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 316

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +    M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 317 TAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMII 376

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 377 NEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 101 KLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 160

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M   NG      +P+  TYS++I+GLCKE  +D A 
Sbjct: 161 SYNTLMNGYIRLGDLDEGFRLKSAML-ANG-----VQPDVYTYSVLINGLCKESKMDDAN 214

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 215 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 274

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CKNG +  A  L+D M    ++P+ FTY TL+DG C  G ++   +    M     + DD
Sbjct: 275 CKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDD 334

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+  +  +A  +  E+   G+KP + TY  + +   +     +  KL  E
Sbjct: 335 VAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 394

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N  A    TY   ++G
Sbjct: 395 MQRNGHAPSVVTYNVLMNG 413



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 122/223 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 187 ANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 246

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CKN ++++A  L +E+  KG+KP   TY TL 
Sbjct: 247 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 306

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            G  +    + A K    M   ++  D   Y   I GLC   Q
Sbjct: 307 DGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQ 349



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 172

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  Q+  
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVD 352

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  D  TY   I+  C +  V
Sbjct: 353 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDV 385



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 130 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANG 189

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAM 249

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 250 EIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 309

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 310 CKEGDLDTAFKHRK 323



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 12/273 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G   VVF          + +   +S +I 
Sbjct: 3   SYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGLIT 62

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 63  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPA 122

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 183 SAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 242

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            + + A++++  M    +  D  TY T I GLC
Sbjct: 243 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC 275



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C    + + +N LM  FC  G I   + +F ++   G +    SYN L+NGY +  +
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G++P V TY+ L +GL +  + + A +LF EM    +  +  T+ T
Sbjct: 175 LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 234

Query: 373 FIDGLCVRPQV 383
            IDG C   +V
Sbjct: 235 LIDGHCKNGRV 245


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 30/349 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    + +++G L K    D   S F+++   G  PD  TY++L++   K  +   G  I
Sbjct: 47  PDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI 106

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +L    +P +VT+ +++ G C   RI +A +L  +LK  G  P+   Y+TLI+GLC+
Sbjct: 107 FEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 166

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF----------------------------KPNTVTY 160
                 A  LF EM  G+ +  +V+                             P+ V+Y
Sbjct: 167 HDRHEEARELF-EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 225

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           ++II  LCK+  V +AKEL  Q       P V   T L+ G C +    EA  +L  M++
Sbjct: 226 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 285

Query: 221 QGVQ-PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            G + P+VV+ + +++ LCK  ++D+A  +L  M +    P+  TY  ++D FC  G+++
Sbjct: 286 AGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 345

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
             +ELF  M   GC  D  +YNILI GYC+  +V+EA+++  E+  +GI
Sbjct: 346 EARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 194/379 (51%), Gaps = 15/379 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +F  L+  L +    +  L +F ++  + + PD + Y+++I   CK+ ++ L    
Sbjct: 12  PTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++++S   P+ VT+T L+  L    +  +   +F ++ + G  P ++TY T++NG C+
Sbjct: 72  FEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 131

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+L + +  G G       P+   YS +IDGLCK    ++A+ELF +M   ++
Sbjct: 132 AGRIDQALSLMRRL-KGTGR-----SPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGDV 184

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V+ YTS I G C A   +EAK + ++M++ G  P+ VS NVI+  LCK+ ++  A  
Sbjct: 185 Q-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 243

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD----FSYNILI 304
           L+D  ++    P       L+DG C   K  RV+E  V +E M    D      +Y+ +I
Sbjct: 244 LMDQAMERKCMPGVPVCTVLVDGLC---KSRRVEEACVILERMLEAGDRAPSVVTYSAVI 300

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G CK   +++A  +  ++   G  P VVTY  +     ++ + + A +LF  M     A
Sbjct: 301 DGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 360

Query: 365 ADTCTYRTFIDGLCVRPQV 383
           +D   Y   I G C   +V
Sbjct: 361 SDVVAYNILIRGYCRAAKV 379



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 136/310 (43%), Gaps = 40/310 (12%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L  ++KA G  P ++T+ +LI  LC    T  AL +F +M      I +  KP+   Y++
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQM------IDMKVKPDAFLYTV 54

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I  LCK   +D A   F QM      P+ VTYT L+H    A  W +   +  EM+ +G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD------------ 270
             P +V+   ++N  CK G++D A  L+  +      P+   Y+TL+D            
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 271 ---------------------GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
                                G C  GK++  K + V M   GC  D  SYN++I   CK
Sbjct: 175 ELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 234

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTC 368
           +  V EA  L ++   +   P V     L  GL + R+ E A  +   M +  D A    
Sbjct: 235 DNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVV 294

Query: 369 TYRTFIDGLC 378
           TY   IDGLC
Sbjct: 295 TYSAVIDGLC 304


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 192/374 (51%), Gaps = 10/374 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV--- 67
           + S N LL CL ++   D V  LF+ L   G  P+++TY+I++N FC+    S+      
Sbjct: 171 IMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRAS 230

Query: 68  -IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I G+I  S   PNVVT+ + IKGLC       A  L   L       N   +N +I GL
Sbjct: 231 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 290

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A  +FKEM N     G++  P+  +YSI+IDG C++G VD+A E+F +M+  
Sbjct: 291 CQGGILDEASEVFKEMKNS----GIL--PDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PN+ +Y+ LI GFC     ++A  +  EM + G+ P+V S +++++  C+ G MD+A
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            +  + M   +  P+AF Y +L+ G+  + +     + F  M+ +G   D  + N +++ 
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC+  +  +AL+L  +    G+     +YN   H +      E+AL+L   M   +V  D
Sbjct: 465 YCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD 524

Query: 367 TCTYRTFIDGLCVR 380
              Y T I     R
Sbjct: 525 VVNYSTLISCFAKR 538



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 45/402 (11%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++  L +    D    +FK + + G+ PD+Y+YSILI+ FC+ G+V     +F  + 
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S   PN+ +++ LI G C E R+ +A  +F ++K  G  P+V +Y+ LI+G CR G   
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+  ++EMT+ N      F P+   Y  +I G  K      A + F  M+   + P+ +
Sbjct: 403 SAIKFWEEMTSNN------FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTI 456

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
               ++  +C   D+N+A  L  +  + GV  N  S N  ++ +C+    + A +LL +M
Sbjct: 457 ACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVM 516

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKE--LFVSMESMG------------------C 293
           ++ +V P+   Y+TL+   C   ++N  K   LF+ M  +G                  C
Sbjct: 517 LKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDC 574

Query: 294 KHD-----------------DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           K D                   +Y  L+ G+C   E+  A +L++E+  +G  P VVTY 
Sbjct: 575 KMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYT 634

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              +   ++ +  +A KL+ +M+   V  D   Y   I   C
Sbjct: 635 CFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFC 676



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 187/393 (47%), Gaps = 14/393 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S++IL+    K    D  L +F+ + + G+ PD+Y+YSILI+ FC+ G +      
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  + F+P+   + SLIKG     +   A   F  ++  G  P+ I  N +++  CR
Sbjct: 408 WEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCR 467

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L ++      E GV F P   +Y+  I  +C+    +KA +L   M   N+
Sbjct: 468 KPDFNKALALSEKFQ----ENGVHFNP--YSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VV Y++LI  F    +  +A  L I+M   G+  NV +  +++N    + KMD A R
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  V P+   Y +L+ GFC TG++ R + LF  M   GC  +  +Y   IN Y 
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN-----DV 363
           K  +  +A  LY ++  +G+ P  + Y  L        +  RA  LF EM+       +V
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNV 701

Query: 364 AADTCTYRTFIDGLCVRPQVRFTYA--RRKGNS 394
              TC   ++I  L  R Q    Y   R KG S
Sbjct: 702 VMYTCLINSYIK-LNKRDQAEKLYEEMRAKGLS 733



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +LI  F     +     +F R        N+++   L+K L  ++R+     LF  L 
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 198

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---NGEIGVVFKPNTVTYSIIID 165
            FG  PN+ TY  ++N  CR     V +    E+      +GE      PN VTY   I 
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGET-----PNVVTYGTYIK 253

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
           GLCK G    A  L   +  +N   N   + ++I+G C     +EA  +  EM + G+ P
Sbjct: 254 GLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILP 313

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +V S +++++  C+ G++D AS +   M    + PN ++Y+ L+DGFC  G++++  E+F
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVF 373

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M++ G   D +SY+ILI+G+C+  +++ A+  + E+      P+   Y +L  G ++ 
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKS 433

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
           +Q   ALK F  MQ   +  DT      +   C +P
Sbjct: 434 KQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKP 469



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 189/410 (46%), Gaps = 45/410 (10%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           +M    P V ++   +  L K   +     L + L       + + ++ +I   C+ G +
Sbjct: 237 YMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGIL 296

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  +  S   P+V +++ LI G C + R+ +A+ +F +++  G  PN+ +Y+ L
Sbjct: 297 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 356

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G    AL +F+EM N     G++  P+  +YSI+IDG C++G +D A + + +
Sbjct: 357 IDGFCKEGRVDKALEVFEEMKNS----GIL--PDVYSYSILIDGFCRKGDMDSAIKFWEE 410

Query: 183 MKYENLNPNVVTYTSLIHG-----------------------------------FCHAND 207
           M   N +P+   Y SLI G                                   +C   D
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           +N+A  L  +  + GV  N  S N  ++ +C+    + A +LL +M++ +V P+   Y+T
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530

Query: 268 LMDGFCLTGKINRVKE--LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           L+   C   ++N  K   LF+ M  +G   +  +Y ILIN +  + +++ A  L+  +  
Sbjct: 531 LIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 588

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
             + P  + Y +L  G     +  RA  LF EM     + +  TY  FI+
Sbjct: 589 SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 14/255 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+ C AK  + +  + LF ++  +G+  ++ TY+ILIN F    ++ + + +
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  S   P+ + +TSL+ G C    +  A ALF ++   GC PNV+TY   IN   +
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK 642

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-N 187
                 A  L+++M     E GV   P+ + Y+++I   C  G +++A+ LF +MK E  
Sbjct: 643 LNKNNQAHKLYEKMK----ERGVY--PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGR 696

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV------QPNVVSSNVIMNELCKNG 241
             PNVV YT LI+ +   N  ++A+ L  EM  +G+      + +V  S    +++ K G
Sbjct: 697 CTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTG 756

Query: 242 KM-DNASRLLDLMVQ 255
           K+   A + LD   Q
Sbjct: 757 KLGGRAKQGLDWRFQ 771



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 125/285 (43%), Gaps = 42/285 (14%)

Query: 136 LNLFKEMTNGNGEIGVVF---KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           +  +KE     GE+  +    + + V + ++I        ++ A  +F++ K + +  N+
Sbjct: 112 VTFYKEENRDAGELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNI 171

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK----NGKMDNASR 248
           ++   L+      N  +  + L   ++  G +PN+ +  ++MN  C+    +  +  AS 
Sbjct: 172 MSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASE 231

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK------------------------------- 277
           +L  +      PN  TY T + G C  G                                
Sbjct: 232 ILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLC 291

Query: 278 ----INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
               ++   E+F  M++ G   D +SY+ILI+G+C+   V++A  ++ E+   GI P + 
Sbjct: 292 QGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIY 351

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +Y+ L  G  +  + ++AL++F EM+ + +  D  +Y   IDG C
Sbjct: 352 SYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFC 396



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 39/230 (16%)

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V +  LI  F   +    A  + +   D G++ N++S N ++  L ++ ++D    L ++
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 253 MVQCDVRPNAFTYNTLMDGFC----LTGKINRVKELFVSMESMG---------------C 293
           +++   RPN  TY  +M+ FC     +  I R  E+   +   G               C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 294 KHDDFS--------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           K   F                     +N +I G C+   ++EA  ++ E+   GI P V 
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +Y+ L  G     + ++A ++F EM+ + +  +  +Y   IDG C   +V
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G++  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLI--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+++TY +LI+G     D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 275 SQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K DD +Y ++I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLNEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 293 XKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D NE   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G  K  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 265 LAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 191 GDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G    G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  D  TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDDRTYTMIINEFCKKGDV 403



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G ++   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFEHRK 341



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC     + A +L + + +  G G    VF          + +    S +I 
Sbjct: 21  SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVLSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G +N    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GL  +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 182/370 (49%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S  N  +  L K    +  L   +R+   G+ PD+ TY+ LI  +C + ++     +
Sbjct: 264 PNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLC 127
              +      P+ V++ +++  LC E +I +   L  K+ +     P+ +TYNTLI+ L 
Sbjct: 324 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLS 383

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL   KE  +        F  + V YS I+   C++G +D+AK L + M   +
Sbjct: 384 KHGHADDALAFLKEAEDKG------FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            NP+VVTYT+++ GFC     +EAK +L +M   G +PN VS   ++N LC +GK   A 
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++++  +    PNA TY  +M GF   GK++   +L   M   G        N+LI   
Sbjct: 498 EMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 557

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+N++V EA     E   KG    VV + T+ HG  +I   E AL +  +M  ++   D 
Sbjct: 558 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDA 617

Query: 368 CTYRTFIDGL 377
            TY    D L
Sbjct: 618 VTYTALFDAL 627



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 7/352 (1%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PP   S+  ++G L K K  + V  L +++     L PD  TY+ LI+   K G      
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
                     F  + V +++++   C + R+ EA +L   + +  C P+V+TY  +++G 
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           CR G    A  + ++M           KPNTV+Y+ +++GLC  G   +A+E+    +  
Sbjct: 453 CRLGRIDEAKKMLQQMYKHG------CKPNTVSYTALLNGLCHSGKSLEAREMINVSEEH 506

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN +TY  ++HGF      +EA  L  EMV++G  P  V  N+++  LC+N K+  A
Sbjct: 507 WWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEA 566

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            + L+  +      N   + T++ GFC  G +     +   M       D  +Y  L + 
Sbjct: 567 KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDA 626

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
             K   ++EA  L  ++  KG+ PT VT+ ++ H   +  + +  L L   M
Sbjct: 627 LGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRM 678



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 162/371 (43%), Gaps = 7/371 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  LL  L+K K       + + +   G+      +  ++  + + G++     +   + 
Sbjct: 199 YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQ 258

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           ++   PN+    + I  L    ++ +A     +++  G +P+++TYN+LI G C      
Sbjct: 259 KAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 318

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNV 192
            AL L   + +          P+ V+Y  ++  LCKE  +++ K L  +M +  NL P+ 
Sbjct: 319 DALELIAGLPSKG------CPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQ 372

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +LIH        ++A   L E  D+G   + V  + I++  C+ G+MD A  L+  
Sbjct: 373 VTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 432

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M      P+  TY  ++DGFC  G+I+  K++   M   GCK +  SY  L+NG C + +
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGK 492

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
             EA  + N        P  +TY  + HG     +   A  L  EM              
Sbjct: 493 SLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINL 552

Query: 373 FIDGLCVRPQV 383
            I  LC   +V
Sbjct: 553 LIQSLCQNQKV 563



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 71/377 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG-FV 67
           P   ++N L+  L+K+ H D  L+  K     G   D   YS +++ FC+ G++     +
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN------------ 115
           +     RSC  P+VVT+T+++ G C   RI EA  +  ++   GC+PN            
Sbjct: 430 VIDMYSRSC-NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 488

Query: 116 -----------------------VITYNTLINGLCRTGHTIVALNLFKEMTNGN-----G 147
                                   ITY  +++G  R G    A +L +EM          
Sbjct: 489 HSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPV 548

Query: 148 EIGVVFKP------------------------NTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           EI ++ +                         N V ++ +I G C+ G ++ A  +   M
Sbjct: 549 EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM 608

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              N +P+ VTYT+L          +EA  L+++M+ +G+ P  V+   +++  C+ G++
Sbjct: 609 YLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRV 668

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+   LLD MV+   +P    YN +++  C  G +   ++L   +     K D  + ++L
Sbjct: 669 DDMLNLLDRMVK--RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVL 726

Query: 304 INGYCKNKEVEEALSLY 320
           +   C  K V  ALS Y
Sbjct: 727 MES-CLKKGV--ALSAY 740



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 1/229 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +  + + Y  ++D L K      A+ +   M    +  +   +  ++  +  A     A 
Sbjct: 192 YSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNAL 251

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L  M   GV+PN+   N  +  L K  K++ A R L+ M    ++P+  TYN+L+ G+
Sbjct: 252 RVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGY 311

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-PFKGIKPT 331
           C   +I    EL   + S GC  D  SY  ++   CK K++E+   L  ++     + P 
Sbjct: 312 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPD 371

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            VTYNTL H L +   A+ AL    E +      D   Y   +   C +
Sbjct: 372 QVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQK 420



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 39/285 (13%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  TY ++++ F + G++S    +   ++   F P  V    LI+ LC   ++VEA   
Sbjct: 510 PNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 569

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +    GC  NV+ + T+I+G C+ G    AL++ ++M   N        P+ VTY+ +
Sbjct: 570 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKH------PDAVTYTAL 623

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN----------------- 206
            D L K+G +D+A EL ++M  + L+P  VT+ S+IH +C                    
Sbjct: 624 FDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKP 683

Query: 207 ----------------DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
                           +  EA+ LL +++    + +  + +V+M    K G   +A ++ 
Sbjct: 684 FRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVA 743

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
             M + ++ P+      +     L G +    +L +     G + 
Sbjct: 744 CQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQQ 788


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 177/369 (47%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  L +      + SL   +   GL P++  Y+ +I   CK    S    +
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             +++ S F P+VVTF +LI   C E  + EA  L  +      EPN ++Y  LI+G C 
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +VA +L  EM      IG    P+ VT   +I GL   G VD+A  +  +M    +
Sbjct: 464 RGEVMVASDLLVEM------IGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   Y  LI G C     + AK LL+EM++Q VQP+      +++   ++ K+ +A +
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M +     +   YN ++ G+C +G +N       SM  +GC  D+F+Y  LI+GY 
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +++ AL    ++  +  KP +VTY +L  G   I   + A  LF  MQ   +  +  
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697

Query: 369 TYRTFIDGL 377
            Y   I  L
Sbjct: 698 HYTVLIGSL 706



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 178/373 (47%), Gaps = 41/373 (10%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P    Y++LI+ +C+ G V  G ++ G +      P VVT+ ++I  L  +S + + 
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            +L  ++K  G  PNV  YNT+I  LC+      AL +  +M      +   F P+ VT+
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM------VASRFDPDVVTF 419

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +I   C+EG V++A +L  +     L PN ++YT LIHGFC   +   A  LL+EM+ 
Sbjct: 420 NTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIG 479

Query: 221 QGVQPNVVS-----------------------------------SNVIMNELCKNGKMDN 245
           +G  P+VV+                                    NV+++ LCK   +  
Sbjct: 480 RGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSA 539

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  LL  M++  V+P+ F Y TL+DGF  + K++  +++F  ME  G   D  +YN +I 
Sbjct: 540 AKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIK 599

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           GYCK+  + EA+   + +   G  P   TY TL  G  +    + AL+   +M       
Sbjct: 600 GYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKP 659

Query: 366 DTCTYRTFIDGLC 378
           +  TY + I G C
Sbjct: 660 NIVTYASLICGYC 672



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 179/369 (48%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N ++  L K +     L++  ++ +    PD+ T++ LI  FC+ G V     +
Sbjct: 379 PNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKL 438

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +R    PN +++T LI G C    ++ A+ L  ++   G  P+V+T   LI+GL  
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    AL + ++M            P+   Y+++I GLCK+  +  AK L ++M  + +
Sbjct: 499 SGQVDEALMVREKMAERQ------VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+   YT+LI GF  ++  ++A+ +   M ++G   ++V+ N ++   CK+G M+ A  
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +  M +    P+ FTY TL+DG+   G I         M    CK +  +Y  LI GYC
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC 672

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
                + A  L+  +  +G+ P VV Y  L   LF+  +A +A   F  M  N  + +  
Sbjct: 673 NIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA 732

Query: 369 TYRTFIDGL 377
           T    ++GL
Sbjct: 733 TMHYLVNGL 741



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 140/290 (48%), Gaps = 6/290 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           +++GLC E R+ E   L       GC P  + YN LI+G CR G     L L  EM    
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
                   P  VTY  II  L ++  + K + L  +MK   L+PNV  Y ++I+  C   
Sbjct: 342 ------IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             ++A  +L +MV     P+VV+ N ++   C+ G ++ A +LL   ++ ++ PN  +Y 
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYT 455

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L+ GFC+ G++    +L V M   G   D  +   LI+G   + +V+EAL +  ++  +
Sbjct: 456 PLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAER 515

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            + P    YN L  GL + R    A  L VEM    V  D   Y T IDG
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDG 565



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 6/338 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    +    +  L L +      L P+  +Y+ LI+ FC  G+V +   +
Sbjct: 414 PDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDL 473

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+VVT  +LI GL    ++ EA  +  K+      P+   YN LI+GLC+
Sbjct: 474 LVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCK 533

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A NL  EM           +P+   Y+ +IDG  +   +  A+++F  M+ +  
Sbjct: 534 KRMLSAAKNLLVEMLEQK------VQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG 587

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++V Y ++I G+C +   NEA   +  M   G  P+  +   +++   K G +  A R
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALR 647

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M++   +PN  TY +L+ G+C  G  +  + LF SM+S G   +   Y +LI    
Sbjct: 648 FLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLF 707

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           K  +  +A + +  +      P   T + L +GL   R
Sbjct: 708 KKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCR 745



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 22/396 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +   L+  L  +   D  L + +++    + PD   Y++LI+  CK   +S    +
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+   +T+LI G     ++ +A  +F  ++  G   +++ YN +I G C+
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A+     M     ++G +  P+  TY+ +IDG  K+G +  A      M     
Sbjct: 604 SGMMNEAVMCMSSMR----KVGCI--PDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+VTY SLI G+C+  + + A+ L   M  +G+ PNVV   V++  L K  K   A+ 
Sbjct: 658 KPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAA 717

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGF--CLTGKINR-------------VKELFVSMESMGC 293
             + M+     PN  T + L++G   C  G IN              + ++F  + S G 
Sbjct: 718 YFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGL 777

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
                +YN +I   C++  + +A+ L  ++  KG  P  VT+ +L +G   + ++ +   
Sbjct: 778 DPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRS 837

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYAR 389
                   D     C Y T ++   + P VR   +R
Sbjct: 838 ALPNEFQQDEFEIICKYMTLLNQHVMSP-VRDEVSR 872



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 147/371 (39%), Gaps = 67/371 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + +N+L+  L K +      +L   +    + PD + Y+ LI+ F +  ++S    I
Sbjct: 519 PDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKI 578

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       ++V + ++IKG C    + EA    + ++  GC P+  TY TLI+G  +
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAK 638

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL    +M           KPN VTY+ +I G C  G  D A+ LF  M+ E L
Sbjct: 639 KGDIKAALRFLCDMMKRR------CKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGL 692

Query: 189 NPNVVTYTSLIHGF---------------------------------------------- 202
            PNVV YT LI                                                 
Sbjct: 693 FPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSN 752

Query: 203 CHANDWNEAKGLLIE----MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
           C   D    K  L++    ++  G+ P + + N I+  LC++  +  A  L + M     
Sbjct: 753 CSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGC 812

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS----YNILINGYCKN---K 311
            P+  T+ +L+ GF   GK  + +    +      + D+F     Y  L+N +  +    
Sbjct: 813 LPDPVTFLSLLYGFSSVGKSGKWRSALPN----EFQQDEFEIICKYMTLLNQHVMSPVRD 868

Query: 312 EVEEALSLYNE 322
           EV   L LY E
Sbjct: 869 EVSRVLQLYAE 879



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 121/286 (42%), Gaps = 43/286 (15%)

Query: 100 AAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
           A  L+ ++ A   E     Y+T  ++ GLC  G       L  E   G G +     P  
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLI-EARWGEGCV-----PGA 311

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+++IDG C+ G V +   L  +M+ + + P VVTY ++IH     +D  + + LL E
Sbjct: 312 VFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWE 371

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M ++G+ PNV   N ++  LCK      A  +L+ MV     P+  T+NTL         
Sbjct: 372 MKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTL--------- 422

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                                     I  +C+  +VEEAL L  E   + ++P  ++Y  
Sbjct: 423 --------------------------IAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L HG     +   A  L VEM G     D  T    I GL V  QV
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQV 502


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 160/301 (53%), Gaps = 6/301 (1%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALN 137
            P++ T+ +LI GLC +  +V A  L  +++  GCEPNVITY  LI+  C+ G    A N
Sbjct: 11  GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           +  EM+      G     N V Y+ +I  LCK+  V  A  +F  M  +   P++ T+ S
Sbjct: 71  VLDEMS------GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LI G C  N + EA GL  +M+ +GV  N ++ N +++   + G M  A +L++ M+   
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
              +  TYN L+   C  G I +   LF  M S G   ++ S NILING C+   ++ AL
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
               ++  +G+ P +VTYN+L +GL +  +A+ AL LF ++Q   +  D  TY T I   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 378 C 378
           C
Sbjct: 305 C 305



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 160/311 (51%), Gaps = 11/311 (3%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S+G  PD++TY+ LI   CK G +     +   +      PNV+T+T LI   C E R+ 
Sbjct: 7   SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 66

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
           EA  +  ++   G   N + YN LI+ LC+      ALN+F +M++         KP+  
Sbjct: 67  EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG------CKPDIF 120

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T++ +I GLCK    ++A  L+  M  E +  N +TY +LIH F       EA  L+ +M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           + +G   + ++ N ++  LC+ G ++    L + M+   + PN  + N L++G C TG I
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
               E    M   G   D  +YN LING CK    +EAL+L+++L  +GI P  +TYNTL
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 339 F-----HGLFE 344
                  G+F+
Sbjct: 301 ISWHCKEGMFD 311



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+  L K  +  +   L   +   G  P++ TY+ILI+ FCK G++     +
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     A N V +  LI  LC + ++ +A  +F  + + GC+P++ T+N+LI GLC+
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+++M       GV+   NT+TY+ +I    + G + +A +L   M +   
Sbjct: 132 VNKFEEALGLYQDMLLE----GVI--ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI   C A +  +   L  +M+ +G+ PN +S N+++N LC+ G + +A  
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M+   + P+  TYN+L++G C TG+      LF  ++  G   D  +YN LI+ +C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           K    ++A  L +     G  P  VT+  L
Sbjct: 306 KEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 335



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 91/167 (54%)

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+  G  P++ + N ++  LCK G + +A  L++ M      PN  TY  L+D FC  G+
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +   + +   M   G   +   YN LI+  CK+++V++AL+++ ++  KG KP + T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L  GL ++ + E AL L+ +M    V A+T TY T I     R  ++
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 171



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%)

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           SM S+GC  D F+YN LI G CK   +  A  L NE+  KG +P V+TY  L     +  
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           + E A  +  EM G  +A +   Y   I  LC   +V+
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 101


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 87  HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 146

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 147 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 206

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G++  PN VT++ +IDG CK G VD A E++ +M 
Sbjct: 207 GLCKESKMDDANELFDEMLVK----GLI--PNGVTFTTLIDGRCKNGRVDLAMEIYKRML 260

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 261 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 320

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+  K D  +Y ++I
Sbjct: 321 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMII 380

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 381 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 105 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 164

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 165 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDDAN 218

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 219 ELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 278

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 279 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 338

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+    +KP   TY  + +   +     +  KL  E
Sbjct: 339 VAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 398

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +  A    TY   ++G
Sbjct: 399 MQRDGHAPSVVTYNVLMNG 417



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 190

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 191 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVD 250

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 349



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 176

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 177 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 236

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 237 TTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 296

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 297 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 356

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM   D+  DT TY   I+  C +  V
Sbjct: 357 AEKMLREMLSVDLKPDTGTYTMIINEFCKKGDV 389



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 134 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 193

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G CKN  V+ A+
Sbjct: 194 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAM 253

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 254 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 313

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 314 CKEGDLDTAFEHRK 327



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 7   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLIT 66

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF   A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 67  AYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 126

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 127 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 186

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 187 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKN 246

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++  M    +  D  TY T I GLC +  ++
Sbjct: 247 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 285


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 183/369 (49%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL    K + Y   L L   + + G  P+  TY+++I+  C+ G V     +
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V + +++KG C+  R V+A  +  ++    C PN  T N +IN LCR
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR 315

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  +  + L+ E  + +G        N VTY+ +I G+C++G VD A EL   M+    
Sbjct: 316 KG-LLQKVTLYLEKMSKHG-----CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++VTY +++ G C A+ W +A+ L+I+M      P+  + N I++  C+ G +  A  
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +    PN+ TY+T++ G    GK+ +  EL   M + G   D   Y +L     
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLN 488

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++EE + + ++L   GI P  V YNT+  GL    + + A+ +  +M       D  
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDES 548

Query: 369 TYRTFIDGL 377
           TY   I+GL
Sbjct: 549 TYIILIEGL 557



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 174/366 (47%), Gaps = 7/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           + N L+  L +       L +   +   G  PD+ TY+IL+   CK         +   +
Sbjct: 165 AHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFM 224

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN VT+  +I  +C E  + +A  L   L + GC+PN + YNT++ G C     
Sbjct: 225 RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERW 284

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
           + A  +  EM   N        PN  T ++II+ LC++G + K      +M       NV
Sbjct: 285 VDADEILDEMVREN------CPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANV 338

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY ++I G C   + + A  LL  M   G +P++V+ N ++  LC   + ++A  L+  
Sbjct: 339 VTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIK 398

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M Q D  P+  T+NT++  +C  G I +  E+F  M   GC  +  +Y+ +I G  K  +
Sbjct: 399 MSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGK 458

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +E+AL L NE+  KG   T   Y  L   L +  + E  +++  ++Q + ++  T  Y T
Sbjct: 459 MEQALELLNEMANKGFN-TDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNT 517

Query: 373 FIDGLC 378
            + GLC
Sbjct: 518 VLLGLC 523



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 176/396 (44%), Gaps = 29/396 (7%)

Query: 1   MRHMHPSPPPVSSFNIL---------------LGCLAKNKHYDTVLSLFKRLNSIGLFPD 45
           +R   PSPP + + +                 L  L      D  L L   + S    PD
Sbjct: 39  VRSSRPSPPGIPNTSTRPPPLPPRRLHGADRRLSALIHRGDLDAALRL---VGSSPRPPD 95

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFA-PNVVTFTSLIKGLCAESRIVEAAALF 104
           +   + L+   C+ G+ +       R++ +C       T+ +L+ G C    + +A  + 
Sbjct: 96  VPLANRLVRDLCRRGRPADA----ARVVEACGPEATAATYGALVDGYCRAGLLEDARRVV 151

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
             + A     +   +N LI+ LC  G    AL +       +G +     P+ VTY+I++
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVL------DGMLCRGCAPDVVTYNILL 205

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
              CK     +A EL   M+ E   PN VTY  +I   C   D ++A+ LL  +  +G +
Sbjct: 206 QAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCK 265

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+ N ++   C   +  +A  +LD MV+ +  PN  T N +++  C  G + +V   
Sbjct: 266 PNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLY 325

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   GC  +  +YN +I+G C+   V+ AL L + +   G KP +VTYNT+  GL  
Sbjct: 326 LEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 385

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
             + E A +L ++M  ND   D  T+ T I   C +
Sbjct: 386 ADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQK 421



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 44/296 (14%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  T +++IN  C+ G +    +   ++ +     NVVT+ ++I G+C +  +  A  L
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
            + +++FGC+P+++TYNT++ GLC       A  L  +M+  +        P+  T++ I
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND------RLPDNSTFNTI 414

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV---- 219
           I   C++G + +A E+F QM  +  NPN  TY+++I G   A    +A  LL EM     
Sbjct: 415 ISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF 474

Query: 220 ------------------------------DQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
                                         D G+ P  V  N ++  LC+NGK D A  +
Sbjct: 475 NTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDV 534

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           L  MV C   P+  TY  L++G    G     +EL   +    C  D  S +++ N
Sbjct: 535 LADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL----CSRDVLSNSLIKN 586


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 184/371 (49%), Gaps = 10/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +  LL  L + +     +  FKR       P LY+++I+I CFC +      +   G
Sbjct: 44  VYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLG 103

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+V  +  ++KG C   R+  A   F K+    C+PNV TYNT+INGLC+ G
Sbjct: 104 YMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFG 162

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A++LF  + +       +  P+  TYS ++ GLC+   ++ A +++  M   N + 
Sbjct: 163 KIDWAVHLFTRLPHD------LVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDG 216

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK-NGKMDNASRL 249
           +   Y ++  GFC     +EA  +L  M+ +G +P+VV+ N I+N +C+   +++ A RL
Sbjct: 217 DAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRL 276

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              MV  D  PNA TY T++ G     ++ R  ELF  M   G   D ++Y+ LI  + K
Sbjct: 277 FQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVK 336

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ--AERALKLFVEMQGNDVAADT 367
            ++++EA S+  +     + P V  Y TL  G    R+   + AL LF  M+   V  + 
Sbjct: 337 VRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNV 396

Query: 368 CTYRTFIDGLC 378
            TY   + GLC
Sbjct: 397 ITYNIVLRGLC 407



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 187/372 (50%), Gaps = 10/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF I++ C    ++          + S+G+ PD+  Y++++  +C +G+V    + 
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++ ++C  PNV T+ ++I GLC   +I  A  LFT+L     +P+  TY+TL++GLC+
Sbjct: 137 FGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ ++  M   N      +  +   Y+ + DG CKE  VD+A E+   M     
Sbjct: 196 AERLEAAIKVYDMMLEAN------YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGC 249

Query: 189 NPNVVTYTSLIHGFC-HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+VVTY  +I+G C + N   EA  L  +MV     PN V+   ++  L K  ++    
Sbjct: 250 KPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCL 309

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M +  + P+ + Y++L+  F    K++  K +           D + Y  LI+GY
Sbjct: 310 ELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGY 369

Query: 308 CKNKE--VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           C+ ++  V+EAL L+  +  + + P V+TYN +  GL +  + + A ++F EM     + 
Sbjct: 370 CRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSP 429

Query: 366 DTCTYRTFIDGL 377
           +  T++    G+
Sbjct: 430 NRMTFKVMTMGM 441



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 9/322 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N ++  L K    D  + LF RL    + PD +TYS L++  C+  ++     +
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L + +  +   + ++  G C E R+ EA  +   +   GC+P+V+TYN +ING+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQ 265

Query: 129 TGHTI-VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             + I  A  LF++M      +G    PN VTY  +I GL K   V +  ELF  M    
Sbjct: 266 YKNRIEEAYRLFQQM------VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG 319

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK--MDN 245
           L+P+   Y SLI+ F      +EAK +L +     V P+V     +++  C+  K  +D 
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M    V PN  TYN ++ G C TG+ +   ++F  M  + C  +  ++ ++  
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTM 439

Query: 306 GYCKNKEVEEALSLYNELPFKG 327
           G     + ++   ++ ++ +KG
Sbjct: 440 GMIHCGKTDKFERIFMDMVYKG 461



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 35/260 (13%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           ++ +   Y+ ++  L +     +A   F +    +  P++ ++T +I  FC+  +   A 
Sbjct: 40  YRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAW 99

Query: 213 GLLIEMVDQGVQPNVVSSNVIM----------------------------------NELC 238
             L  M   G+ P+V + NV++                                  N LC
Sbjct: 100 RYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKTCKPNVATYNTVINGLC 159

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K GK+D A  L   +    V P+ FTY+TL+ G C   ++    +++  M       D  
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR-QAERALKLFVE 357
           +YN + +G+CK + V+EAL +   +  +G KP+VVTYN + +G+ + + + E A +LF +
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M G+D   +  TY T I GL
Sbjct: 280 MVGSDCPPNAVTYGTMILGL 299



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  ++  L+K       L LFK ++  GL PD Y Y  LI  F K+ ++     
Sbjct: 286 PPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKS 345

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLC--AESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           I     R+   P+V  +T+LI G C   + R+ EA  LF  +K     PNVITYN ++ G
Sbjct: 346 ILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRG 405

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+TG    A  +F+EM        V   PN +T+ ++  G+   G  DK + +F+ M Y
Sbjct: 406 LCKTGRFDEAYQIFQEM------FKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVY 459

Query: 186 E 186
           +
Sbjct: 460 K 460



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 6/211 (2%)

Query: 176 AKELF-LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           A++ F    K E    +V  YT L+H    A    EA       +    +P++ S  +I+
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-- 292
              C       A R L  M    + P+   YN ++ G+C  G++ R     +    MG  
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA---LIKFGKMGKT 143

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           CK +  +YN +ING CK  +++ A+ L+  LP   + P   TY+TL HGL +  + E A+
Sbjct: 144 CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAI 203

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           K++  M   +   D   Y    DG C   +V
Sbjct: 204 KVYDMMLEANYDGDAGAYNAMADGFCKERRV 234


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 175/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++I+++ FCK G++  
Sbjct: 95  HKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRR 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +ID  CK G VD A E++ QM 
Sbjct: 215 GLCKESKVDEANELFNEMLDR----GLV--PNGVTFTTLIDVHCKNGMVDSAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  +P+++TY +LI+G C   D  + + L+ EM   G++P+ ++   +++  CK G ++
Sbjct: 269 SQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++  +R +   Y  L+ G C  G+ +  +++F  M S+G K D+ +Y ++I
Sbjct: 329 TAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V  A  L  E+   G  P VVT
Sbjct: 389 NEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  ++   C E  +  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  VD+A 
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKVDEAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M    L PN VT+T+LI   C     + A  +  +M+ QG  P++++ N ++  L
Sbjct: 227 ELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +     L+D M    ++P+  TY TL+DG C  G +    E    M     + D+
Sbjct: 287 CKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDN 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  L++G C+    ++A  ++ E+   G+KP   TY  + +   +      A +L  E
Sbjct: 347 VAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 160/340 (47%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S L+  + + G V      F    +  F     T   +++ L            +
Sbjct: 65  DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N +++  C+ G    A ++F  +T          +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  +EA  L  EM+D+G+ 
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG +D+A  +   M+     P+  TYNTL+ G C  G + +V+ L
Sbjct: 239 PNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRAL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +
Sbjct: 299 IDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             +A+ A K+F EM    +  D  TY   I+  C +  VR
Sbjct: 359 EGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVR 398



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 119/228 (52%), Gaps = 8/228 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           V     I+ ++L   F+P+++T+ +LI GLC +  + +  AL  ++   G +P+ ITY T
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M      I    + + V Y+ ++ GLC+EG  D A+++F 
Sbjct: 317 LIDGCCKEGDLETAFEFRKRM------IKESIRLDNVAYTALVSGLCQEGRADDAEKMFR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D   A  LL EM   G  P VV+
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           ++H FC   +   A+ +   +   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 142 VMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+ +CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  +G  P ++TYNTL +GL +    ++   L  EM  N +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGC 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEFRK 335


>gi|115474407|ref|NP_001060800.1| Os08g0107700 [Oryza sativa Japonica Group]
 gi|113622769|dbj|BAF22714.1| Os08g0107700, partial [Oryza sativa Japonica Group]
          Length = 374

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 167/304 (54%), Gaps = 6/304 (1%)

Query: 30  VLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
            +SLF+R+  +    + P+L TYS++I+C  ++G + L F   GR++RS +    +TF+ 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 87  LIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           L+K LC + R  EA  +   ++   GC PNV +Y  L+ GLC    +  AL+L   M   
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGF-VDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
           +   G  + P+ V+Y+ +I+GL +EG  +D A  LF QM  + L+P+VVTY S+I     
Sbjct: 192 DDTRGG-YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSK 250

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
           A   ++A  +L+ MV  G  PN ++ N +++  C +GK ++A  +   M +  V P+ FT
Sbjct: 251 ARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFT 310

Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
           YNTLM   C  G+    +++F SM   G K +  +Y  L++GY     + +   L + + 
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV 370

Query: 325 FKGI 328
             GI
Sbjct: 371 RNGI 374



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 18/310 (5%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAA--LFTKLKAFG---CEPNVITYNTLINGLCRTGHTI 133
           P   +   L + L   +R   A A  LF ++         PN+ITY+ +I+   R GH  
Sbjct: 49  PTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYENLNPNV 192
           +A      +          +    +T+S ++  LC +    +A ++ L+ M      PNV
Sbjct: 109 LAFAALGRVIRSG------WTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNV 162

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMV-----DQGVQPNVVSSNVIMNELCKNGK-MDNA 246
            +YT L+ G C  N   +A  LL  M+       G  P+VVS N ++N L + G+ +D A
Sbjct: 163 FSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTA 222

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L D M+   + P+  TYN+++        +++   + V M   G   +  ++N L++G
Sbjct: 223 YHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHG 282

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           YC + +  +A+ ++  +   G++P V TYNTL   L +  ++  A K+F  M       +
Sbjct: 283 YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342

Query: 367 TCTYRTFIDG 376
           + TY T + G
Sbjct: 343 SATYGTLLHG 352



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 18/256 (7%)

Query: 134 VALNLFKEMTNGNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           VA++LF+ M        +V +P    N +TYS++ID   + G +D A     ++      
Sbjct: 71  VAISLFRRMV-------MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWT 123

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGL-LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              +T++ L+   C     +EA  + L  M   G  PNV S  +++  LC   +   A  
Sbjct: 124 AEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALH 183

Query: 249 LLD-LMVQCDVR----PNAFTYNTLMDGFCLTGK-INRVKELFVSMESMGCKHDDFSYNI 302
           LL  +MV  D R    P+  +YNT+++G    G+ ++    LF  M   G   D  +YN 
Sbjct: 184 LLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNS 243

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+   K + +++A  +   +   G  P  +T+N+L HG     +   A+ +F  M  + 
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDG 303

Query: 363 VAADTCTYRTFIDGLC 378
           V  D  TY T +  LC
Sbjct: 304 VEPDVFTYNTLMGYLC 319


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 179/365 (49%), Gaps = 8/365 (2%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L +  + D  + +F+ ++      D YTYS L++  C  G++     +   +      PN
Sbjct: 10  LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
            V F  LI  LC +  +  A+ L   +   GC PN +TYN+L++GLC  G    A++L  
Sbjct: 70  PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
            M            PN +T+  ++DG  K G       + + ++ +    N  +Y+SLI 
Sbjct: 130 RMVANK------CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 183

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G            L  EMV++G +PN +  + +++ LC+ GK D A   L  M      P
Sbjct: 184 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 243

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N+FTY++LM G+   G I++   ++  M    C H +  Y+ILING CKN +++EAL ++
Sbjct: 244 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 303

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM--QGNDVAADTCTYRTFIDGLC 378
            ++  +GIK  VV Y+++ HG    +  E+ +KLF +M      +  D  TY   ++  C
Sbjct: 304 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 363

Query: 379 VRPQV 383
            +  V
Sbjct: 364 TKNSV 368



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 180/364 (49%), Gaps = 37/364 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+  L      D  +SL   +   G FP+   +++LI+  CK G +S    +   +
Sbjct: 37  TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 96

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN VT+ SL+ GLC + ++ +A +L  ++ A  C PN IT+ TL++G  + G  
Sbjct: 97  FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRA 156

Query: 133 ------IVALN-----------------LFKEMTNGNGEIGVVF---------KPNTVTY 160
                 +V+L                  LFKE   G GE G+           KPNT+ Y
Sbjct: 157 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKE---GKGEHGMQLWKEMVEKGCKPNTIVY 213

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           S +IDGLC+EG  D+AKE  ++MK +   PN  TY+SL+ G+  A D ++A  +  EM D
Sbjct: 214 SALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTD 273

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                + V  ++++N LCKNGK+  A  +   M+   ++ +   Y++++ GFC    + +
Sbjct: 274 NDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQ 333

Query: 281 VKELFVSM--ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             +LF  M   +   + D  +YNIL+N +C    V  A+ + N +  +G  P  +T +  
Sbjct: 334 GMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIF 393

Query: 339 FHGL 342
              L
Sbjct: 394 LKTL 397



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 147/292 (50%), Gaps = 6/292 (2%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++  LC    + +A  +F  +    C  +  TY+TL++GLC  G    A++L  EM    
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM---- 61

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            ++   F PN V ++++I  LCK+G + +A +L   M  +   PN VTY SL+HG C   
Sbjct: 62  -QVEGTF-PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 119

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
             ++A  LL  MV     PN ++   +++   K+G+  +  R+L  + +   R N F+Y+
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 179

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           +L+ G    GK     +L+  M   GCK +   Y+ LI+G C+  + +EA     E+  K
Sbjct: 180 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G  P   TY++L  G FE     +A+ ++ EM  ND       Y   I+GLC
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 291



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 2/237 (0%)

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I+  LC+ G VD+A E+F  M   N   +  TY++L+HG C+    +EA  LL EM  +G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             PN V+ NV+++ LCK G +  AS+L+D M      PN  TYN+L+ G CL GK+++  
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L   M +  C  +D ++  L++G+ K+    + + +   L  KG +    +Y++L  GL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSGNT 397
           F+  + E  ++L+ EM       +T  Y   IDGLC   +P     Y     N G+T
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 242



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S++ L+  L K    +  + L+K +   G  P+   YS LI+  C+ G+          +
Sbjct: 177 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 236

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN  T++SL+ G      I +A  ++ ++    C  + + Y+ LINGLC+ G  
Sbjct: 237 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 296

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN--LNP 190
             AL ++K+M +         K + V YS +I G C    V++  +LF QM   N  L P
Sbjct: 297 KEALIVWKQMLSRG------IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 350

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN--------------- 235
           +VVTY  L++ FC  N  + A  +L  M+DQG  P+ ++ ++ +                
Sbjct: 351 DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREF 410

Query: 236 ------ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                  L K  +   AS ++++M+Q  + P   T+   +   C   K+ +
Sbjct: 411 LDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRK 461


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++ + L+  L K  + D+   L  +L   G  P+L+ Y+ LIN  CK   +    ++
Sbjct: 321 PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELL 380

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +       N VT++ LI   C    +  A + F ++   G    +  YN+LING C+
Sbjct: 381 YKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCK 440

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L+ +M N   E      P   T++ +I G CK+  V+KA +L+ +M  + +
Sbjct: 441 FGDLSAAEFLYTKMINEGLE------PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+V T+T+LI+G C  N+  EA  L  EMV++ ++P  V+ NV++   CK   MD A  
Sbjct: 495 APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFE 554

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL+ M+   + P+ +TY  L+ G C TG+++  K+    +     K ++  Y+ L++GYC
Sbjct: 555 LLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYC 614

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + EALS   E+  +GI   +V +  L  G  + +  +R   L  +M    +  D+ 
Sbjct: 615 GQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSV 674

Query: 369 TYRTFIDG 376
            Y + ID 
Sbjct: 675 IYTSMIDA 682



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 8/378 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N+L+  L K       L + K L   GL  D+ TY  L+  FC++ Q   G  +  
Sbjct: 253 IVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMN 312

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   F P     + L+ GL  +  I  A  L  KL  FG  PN+  YN LIN LC+  
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGE 372

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  L+K M + N         N VTYSI+ID  CK G +D A+  F +M  + +  
Sbjct: 373 DLDKAELLYKNMHSMN------LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRE 426

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            +  Y SLI+G C   D + A+ L  +M+++G++P   +   +++  CK+ +++ A +L 
Sbjct: 427 TIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLY 486

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M + ++ P+ +T+  L+ G C T ++    +LF  M     K  + +YN++I GYCK 
Sbjct: 487 REMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKA 546

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +++A  L  ++   G+ P   TY  L  GL    +   A     ++   ++  +   Y
Sbjct: 547 HNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCY 606

Query: 371 RTFIDGLCVRPQVRFTYA 388
              + G C   Q R T A
Sbjct: 607 SALLHGYC--GQGRLTEA 622



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 42/381 (11%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           L+ ++ + GL P   T++ LI+ +CK  QV   F ++  +     AP+V TFT+LI GLC
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           + + + EA+ LF ++     +P  +TYN +I G C+  +   A  L ++M + NG +   
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH-NGLV--- 565

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF---------- 202
             P+T TY  +I GLC  G V  AK+    +  +NL  N + Y++L+HG+          
Sbjct: 566 --PDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 203 ----------------CHA---------NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
                           CHA          D     GLL +M DQG++P+ V    +++  
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K G    +   LDLMV     PN  TY   M+G C  G+I+R   LF  M +     + 
Sbjct: 684 SKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNS 743

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y   ++   K   ++EA  L++E+  KG+     TYN L  G  ++ +   A K+  E
Sbjct: 744 VTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSE 802

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           M  N +  D  TY T I   C
Sbjct: 803 MTENGIFPDCITYSTIIYEHC 823



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 180/388 (46%), Gaps = 39/388 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+++    K  + D    L + +   GL PD YTY  LI+  C  G+VS     
Sbjct: 531 PTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDF 590

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     N + +++L+ G C + R+ EA +   ++   G   +++ +  LI+G  +
Sbjct: 591 IDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMK 650

Query: 129 TGHTIVALNLFKEMTN-GNGEIGVVFK----------------------------PNTVT 159
                    L K+M + G     V++                             PN VT
Sbjct: 651 QQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVT 710

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+  ++GLCK G +D+A  LF +M   N++PN VTY   +       +  EA  L  EM+
Sbjct: 711 YTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML 770

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+  N  + N+++   CK G++  A+++L  M +  + P+  TY+T++   C +G + 
Sbjct: 771 -KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVG 829

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY---- 335
              EL+ +M   G + D  ++N+LI G C N  +++A  L N++  +G+KP  +      
Sbjct: 830 AAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKR 889

Query: 336 -----NTLFHGLFEIRQAERALKLFVEM 358
                N L HG     + + AL+L+  M
Sbjct: 890 DLGVCNFLMHGGCVTGEVDTALRLYHSM 917



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 16/308 (5%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+  DL  +++LI+   K   +   F +  ++      P+ V +TS+I     E    ++
Sbjct: 633 GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKS 692

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
                 +    C PNV+TY   +NGLC+ G    A +LF++M   N        PN+VTY
Sbjct: 693 GECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN------ISPNSVTY 746

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
              +D L KEG + +A +L  +M  + L  N  TY  LI GFC      EA  +L EM +
Sbjct: 747 GCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTE 805

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G+ P+ ++ + I+ E C++G +  A  L D M++  V P++  +N L+ G C+ G +++
Sbjct: 806 NGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDK 865

Query: 281 VKELFVSMESMGCK---------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
             EL   M S G K          D    N L++G C   EV+ AL LY+ +  + +K +
Sbjct: 866 AFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLS 925

Query: 332 VVTYNTLF 339
           +  +  L+
Sbjct: 926 LEMWKCLY 933



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 181/419 (43%), Gaps = 58/419 (13%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDL-----------------YTYSILIN 54
           +SF IL+  L +NK +    SL   L   G  P                     +  L++
Sbjct: 97  TSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVH 156

Query: 55  CFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            + +  +V    V+   +L +   P V T ++++ GL    + +    +F +    G +P
Sbjct: 157 SYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKP 216

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           +  T + +I  LC       A      M +        F  + VTY+++I GLCK G V 
Sbjct: 217 DPYTCSAVIRSLCELKDFCRAKEKILWMESNR------FDLSIVTYNVLIHGLCKGGGVL 270

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ------------- 221
           +A E+   ++ + L  +VVTY +L+ GFC    +++   L+ EMV+              
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 222 ----------------------GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
                                 G  PN+   N ++N LCK   +D A  L   M   ++ 
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
            N  TY+ L+D FC  G ++  +  F  M   G +   + YN LING+CK  ++  A  L
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           Y ++  +G++PT  T+ TL  G  +  Q E+A KL+ EM   ++A    T+   I GLC
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 92/261 (35%), Gaps = 63/261 (24%)

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV---------------- 228
           ++N+N    ++  L+H       +  A  LL  ++ +G  P  V                
Sbjct: 89  HKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSST 148

Query: 229 ------------------------------------SSNVIMNELCKNGKMDNASRLLDL 252
                                               + + I+N L +  K      + D 
Sbjct: 149 LGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDE 208

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            V   V+P+ +T + ++   C      R KE  + MES        +YN+LI+G CK   
Sbjct: 209 SVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGG 268

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V EAL +   L  KG+K  VVTY TL  G   ++Q +  + L  EM              
Sbjct: 269 VLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSG 328

Query: 373 FIDGLCVRPQVRFTYARRKGN 393
            +DGL           R+KGN
Sbjct: 329 LVDGL-----------RKKGN 338


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 171/365 (46%), Gaps = 29/365 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N L+  L K  + +     F  + + GL PDL TY+ LIN +CK G +     +
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG + R+   P V+T+  LI G C    +  A  L  ++    C P+V TY  L+NG C 
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452

Query: 129 TGHTIVALNLFKEMTNGNGE---------------IGVV--------------FKPNTVT 159
             +  +    F EM +   E               IG +                 +TVT
Sbjct: 453 VRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVT 512

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+++IDGLCK G +  A  L+++M  + L  + VTYT LIH  C      EAK +   MV
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+ P+VV+  + ++  C+ G +  A      M++  V PN  TYN LM   C  G+  
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              + F  M   G   + ++Y +LI+G CK      A+ LY E+  KGI P   T+N LF
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALF 692

Query: 340 HGLFE 344
            G  E
Sbjct: 693 KGFGE 697



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 9/378 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V   N +L  L     +D + +++  +  +G+ P ++TY+ L++ FCK G++  
Sbjct: 188 HGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQ 247

Query: 65  GFVIFGRILRSCFA--PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              +   +        PN VT+  +I GL  +  + +AA L   ++    + +  TYN L
Sbjct: 248 AVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPL 306

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I GL        A  L  EM N     G+V  P  VTY+ +IDGL K G  + A+  F +
Sbjct: 307 ITGLLARDFVEKAGALLLEMENE----GIV--PTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+ + L P+++TY SLI+G+C A +  +A  L  ++   G+ P V++ N++++  C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           ++ A RL + M + D  P+  TY  LM+G C+   +  V+  F  M S G + D F+YN 
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
            I+       +  A  L  E+  +GI    VTYN L  GL +    + A  L+++M  + 
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDG 540

Query: 363 VAADTCTYRTFIDGLCVR 380
           +  D  TY   I   C R
Sbjct: 541 LRLDCVTYTCLIHAHCER 558



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 180/382 (47%), Gaps = 9/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS--IGLFPDLYTYSILINCFCKMGQVSLGF 66
           P + ++N LL    K    D  ++L K + +   G  P+  TY+++IN   + G++    
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   I+R     +  T+  LI GL A   + +A AL  +++  G  P V+TYNTLI+GL
Sbjct: 287 QLVD-IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            +TG+   A   F EM            P+ +TY+ +I+G CK G + +A  LF  +K  
Sbjct: 346 FKTGNAEAAQVKFDEMRAKG------LLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P V+TY  LI G+C   D   A+ L  EM ++   P+V +  ++MN  C    +   
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
               D M+   + P+ F YNT +      G I    +L   M   G   D  +YN+LI+G
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK   +++A  L+ ++   G++   VTY  L H   E  +   A  +F  M  + ++  
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS 579

Query: 367 TCTYRTFIDGLCVRPQVRFTYA 388
             TY  FI   C R  +   Y 
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYG 601



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 171/359 (47%), Gaps = 9/359 (2%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           LS F+ +   G+ P +   + ++       +      ++  +L+    P++ T+ +L+  
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 91  LCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
            C   R+ +A AL   +  +A GC PN +TYN +INGL R G    A  L   M      
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR----- 293

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
             +  K +  TY+ +I GL    FV+KA  L L+M+ E + P VVTY +LI G     + 
Sbjct: 294 --LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
             A+    EM  +G+ P++++ N ++N  CK G +  A  L   + +  + P   TYN L
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           +DG+C  G +   + L   M    C  D  +Y IL+NG C  + +      ++E+  KG+
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +P    YNT       I     A +L  EM    +++DT TY   IDGLC    ++  Y
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY 530



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L      +   +L   + + G+ P + TY+ LI+   K G      V F  +
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 P+++T+ SLI G C    + +A  LF  LK  G  P V+TYN LI+G CR G  
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDL 421

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L +EMT  +        P+  TY+I+++G C    +   +  F +M  + L P+ 
Sbjct: 422 EGARRLKEEMTEED------CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDC 475

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y + I           A  L  EM+ +G+  + V+ NV+++ LCK G + +A  L   
Sbjct: 476 FAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMK 535

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV   +R +  TY  L+   C  G++   K +F  M + G      +Y I I+ YC+   
Sbjct: 536 MVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGN 595

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A   + ++  +G++P  VTYN L H L  + + E A + F EM    +  +  TY  
Sbjct: 596 LYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTL 655

Query: 373 FIDGLC 378
            IDG C
Sbjct: 656 LIDGSC 661


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 6/355 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           + +  L   G+ P+   +++L+    + G+++    +F  +LR    P VVTF +L+ G+
Sbjct: 100 AFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGM 159

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  S +  A AL   +   G  P+V TY   I GLC+TG    A+ +F+EM     E G 
Sbjct: 160 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC----ERG- 214

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PNTV  + +ID  CKEG V    EL  +M    +  ++V Y +L++GFC   D   A
Sbjct: 215 -LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA 273

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             ++ EM   G++P+ V+   +++  CK G++D A  +   M    V  +  TY  L+ G
Sbjct: 274 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 333

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               G+    + +   M   G + D+ +Y ++I+ +CKN +V+       E+  KG  P 
Sbjct: 334 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 393

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           +VTYN + +G   + Q + A  L   M    V  +  TY   +DG C   +VR T
Sbjct: 394 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDT 448



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  + K    +   +L   +   G+ PD+YTY   I   CK G++     +
Sbjct: 147 PTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEM 206

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN V  T+LI   C E  +     L  ++   G + +++ YN L+NG CR
Sbjct: 207 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 266

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ +EM           KP+ VTY+ +IDG CKEG +D A E+  +M  E +
Sbjct: 267 VRDMKAANDIVEEMRKDG------LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGV 320

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTYT+LI G   A    +A+ +L EM++ G+QP+  +  ++++  CKNG +    +
Sbjct: 321 ALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK 380

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M      P   TYN +M+GFC  G++     L  +M ++G   +D +YNIL++G+C
Sbjct: 381 HLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 440

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           K+ +V +   L +    KG+      Y +L +   + + A+
Sbjct: 441 KHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVKKKSAK 478



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 8/301 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA A +  L   G  P    +N L+  + R+G    A N+F EM           +P 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG------VQPT 148

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VT++ ++ G+CK   ++ A  L   M    + P+V TY + I G C      +A  +  
Sbjct: 149 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 208

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM ++G+ PN V    +++  CK G +     L   M    V+ +   YN L++GFC   
Sbjct: 209 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 268

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +    ++   M   G K D  +Y  LI+G CK  E++ A+ +  E+  +G+    VTY 
Sbjct: 269 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 328

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR--FTYARRKGNS 394
            L  GL +  ++  A ++  EM    +  D  TY   ID  C    V+  F + +   N 
Sbjct: 329 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 388

Query: 395 G 395
           G
Sbjct: 389 G 389


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN+V+++ +IDG CK+G VD A E++ QM 
Sbjct: 215 GLCKESKLDDANELFDEMLD-NGLV-----PNSVSFTTLIDGHCKDGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +   L   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  + G     LN    + N     GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 173 SFNTLMNGYIKLGD----LNEGFRLKNAMQASGV--QPDVYTYSVLINGLCKESKLDDAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M    L PN V++T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CKNG +  A  L++ M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 287 CKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP + TY  + +   +        KL  E
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 122/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +L++G+    D NE   L   M 
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  K+D+A+ L D M+   + PN+ ++ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CKN ++++A  L NE+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   +A ++F  +T          +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN VS 
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CK+G++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P+VVS N +MN   K G ++   RL + M    
Sbjct: 142 LMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  S+  LI+G+CK+  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 189/376 (50%), Gaps = 12/376 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V + NIL+    + +  D  L LF  +     L P+  TY+ +I C+CKM ++     
Sbjct: 68  PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQ 127

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGL 126
           +      SC + +V+  TS+ +G C   R+ EA  L   + +    +P+++ +N +I+G 
Sbjct: 128 LLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMK 184
           C+ G    A  + + + +    +G V  PN VTY+ +IDG CK G + +A +LF  L  +
Sbjct: 186 CKAGRVREAYEMLETLVS----MGCV--PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
             +  PNVVT+ +LI G C A+    A  L+ +M  + ++ +  +   +M+ LCK G+  
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
             SR+ + M++    P+  TY TL+   C  G +   +++  SM + G   D  +Y +L+
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G  +N +V  A   + ++  +   P  V Y+ L  G  +    + A+K +VEM    +A
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419

Query: 365 ADTCTYRTFIDGLCVR 380
            D  T +  ++ LC R
Sbjct: 420 PDPATCKLLVEMLCKR 435



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 13/338 (3%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+ +T+S+LI   CK G++      + ++L     PN+     L+  LC   ++ +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F   +   C P+VIT N LING C       AL LF EM     E      P   TY+ I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-----EKNFALVPEATTYTAI 112

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QG 222
           I   CK   +D+A++L  +      + +V+  TS+  GFC A   +EA  LL++MV+ + 
Sbjct: 113 IKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            +P++V+ NVI++  CK G++  A  +L+ +V     PNA TY TL+DGFC +G ++   
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 283 ELF--VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           +LF  +S      + +  ++N LI+G CK   +E A  L  ++  + ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  +     ++F EM          TY T +   C
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M     + P + ++N+++    K         + + L S+G  P+  TY+ LI+ FCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224

Query: 61  QVSLGFVIFGRILRS---CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
            +S    +F ++L S      PNVVTF +LI GLC   R+  A  L  ++KA     +  
Sbjct: 225 NLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TY TL++GLC+ G T     +F+EM            P+ VTY+ ++   CK G +  A+
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ++   M  + + P+V TYT L+ G         A     +++ +   P  V  + ++   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           CK   +D A +    M+   + P+  T   L++  C  G+ +
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 189/376 (50%), Gaps = 12/376 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V + NIL+    + +  D  L LF  +     L P+  TY+ +I C+CKM ++     
Sbjct: 68  PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQ 127

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGL 126
           +      SC + +V+  TS+ +G C   R+ EA  L   + +    +P+++ +N +I+G 
Sbjct: 128 LLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF--LQMK 184
           C+ G    A  + + + +    +G V  PN VTY+ +IDG CK G + +A +LF  L  +
Sbjct: 186 CKAGRVREAYEMLETLVS----MGCV--PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
             +  PNVVT+ +LI G C A+    A  L+ +M  + ++ +  +   +M+ LCK G+  
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
             SR+ + M++    P+  TY TL+   C  G +   +++  SM + G   D  +Y +L+
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
            G  +N +V  A   + ++  +   P  V Y+ L  G  +    + A+K +VEM    +A
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLA 419

Query: 365 ADTCTYRTFIDGLCVR 380
            D  T +  ++ LC R
Sbjct: 420 PDPATCKLLVEMLCKR 435



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 165/304 (54%), Gaps = 15/304 (4%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
           PN  TF+ LI GLC   R+ EA   + ++    C PN+   N L+  LC+ G    A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTS 197
           F+         G+   P+ +T +I+I+G C+   +DKA ELF +M+    L P   TYT+
Sbjct: 61  FR---------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR-LLDLMVQC 256
           +I  +C  +  ++A+ LL E        +V++   +    CK  ++D A + LLD++ + 
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
             +P+   +N ++ GFC  G++    E+  ++ SMGC  +  +Y  LI+G+CK+  + EA
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 317 LSLYNELPFKG--IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           L L+  L  +    +P VVT+N L  GL +  + E A +L  +M+  D+ ADT TY T +
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 375 DGLC 378
           DGLC
Sbjct: 290 DGLC 293



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 170/338 (50%), Gaps = 13/338 (3%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+ +T+S+LI   CK G++      + ++L     PN+     L+  LC    + +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
           F   +   C P+VIT N LING C       AL LF EM     E      P   TY+ I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-----EKNFALVPEATTYTAI 112

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD-QG 222
           I   CK   +D+A++L  +      + +V+  TS+  GFC A   +EA  LL++MV+ + 
Sbjct: 113 IKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
            +P++V+ NVI++  CK G++  A  +L+ +V     PNA TY TL+DGFC +G ++   
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 283 ELF--VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           +LF  +S      + +  ++N LI+G CK   +E A  L  ++  + ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           GL +  +     ++F EM          TY T +   C
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M     + P + ++N+++    K         + + L S+G  P+  TY+ LI+ FCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224

Query: 61  QVSLGFVIFGRILRS---CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
            +S    +F ++L S      PNVVTF +LI GLC   R+  A  L  ++KA     +  
Sbjct: 225 NLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TY TL++GLC+ G T     +F+EM            P+ VTY+ ++   CK G +  A+
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ++   M  + + P+V TYT L+ G         A     +++ +   P  V  + ++   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           CK   +D A +    M+   + P+  T   L++  C  G+ +
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 202/404 (50%), Gaps = 39/404 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SFN +L    ++  +      F    + G+ P+L TY+ILI   CK  Q   G  +
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P+++++ +LI  L     +++A  LF ++   G  P+V+ YN LI+G  R
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  ++K +   +        P+  TY+I+I+GLCK G +D++ E++ +MK    
Sbjct: 232 KGDFVKANEIWKRLLTESS-----VYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEK 286

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++ T++S+IHG   A ++N A+ +  EM++ G+ P+V + N +++ L + GK++    
Sbjct: 287 SPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE 346

Query: 249 LLDLMVQ---CDV-------------------------------RPNAFTYNTLMDGFCL 274
           L ++M +   C++                               + ++ TY  L++G C 
Sbjct: 347 LWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G +N+   +    E+ G   D F+Y+ +++G CK   +E+A+ L +++     K     
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +N+L +G     + E A+ +  EM+  D A    +Y T I+GLC
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLC 510



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 44/417 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NI++  L K    D  + ++ R+      PDL+T+S +I+   K G  +    +
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312

Query: 69  FGRILRSCFAP----------------------------------NVVTFTSLIKGLCAE 94
           F  ++ S  +P                                  N+V++  LI+GL   
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDN 372

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
            ++ +A   +  L   G + +  TY  LINGLC+ G+   AL + +E  N   ++     
Sbjct: 373 KKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL----- 427

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            +T  YS ++ GLCK+G +++A EL  QMK      N   + SLI+G+  A    EA  +
Sbjct: 428 -DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISV 486

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L EM  +   P VVS N I+N LCK  +  +A   L  M++  ++P+  TY+ L+DG C 
Sbjct: 487 LREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCR 546

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
             K++    L+    +   K D   +NI+I+G C  ++V+ AL ++ ++      P +VT
Sbjct: 547 GEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVT 606

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC----VRPQVRFTY 387
           +NT+  GL++      ALK++  +    +  D  +Y     GLC    V   + F Y
Sbjct: 607 HNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLY 663



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 6/334 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + S+N+L+  L  NK  +  +  ++ L+  GL  D  TY +LIN  CK G ++    I  
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                    +   ++S++ GLC +  + +A  L  ++K    + N   +N+LING  R  
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A+++ +EM + +        P  V+Y+ II+GLCK      A     +M  E L P
Sbjct: 479 KLEEAISVLREMKSKDC------APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKP 532

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +++TY+ LI G C     + A  L  + +++ ++P++   N+I++ LC   K+D A  + 
Sbjct: 533 DMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIF 592

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M Q +  P+  T+NT+M+G    G      +++  +   G + D  SYNI   G C  
Sbjct: 593 TQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSC 652

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
             V +A+    +   +GI P   T+N L   + +
Sbjct: 653 ARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVD 686



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 6/304 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++ +L+  L KN + +  L + +   + G   D + YS +++  CK G +     +  +
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           + ++    N   F SLI G     ++ EA ++  ++K+  C P V++YNT+INGLC+   
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A    KEM     E G+  KP+ +TYS++IDGLC+   VD A  L+ Q   + L P+
Sbjct: 515 FSDAYLSLKEML----EEGL--KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           +  +  +IHG C A   + A  +  +M      P++V+ N IM  L K G    A ++ D
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            +++  ++P+  +YN    G C   +++   E        G   +  ++N+L+     +K
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688

Query: 312 EVEE 315
            + E
Sbjct: 689 PLME 692



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 2/216 (0%)

Query: 164 IDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           I    K    D+A  LF  M      NP + ++ S+++ F  +N W EA+         G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + PN+ + N+++   CK  + +    LL  M +  + P+  +Y TL++    +G +    
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHG 341
           ELF  M   G   D   YNILI+G+ +  +  +A  ++  L  +  + P+V TYN + +G
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           L ++ + + +++++  M+ N+ + D  T+ + I GL
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   NI++  L   +  D  L +F ++  +   PDL T++ ++    K G       I
Sbjct: 567 PDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKI 626

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           + RIL +   P+++++    KGLC+ +R+ +A          G  PN  T+N L+  +
Sbjct: 627 WDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 98  HKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 157

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G  P+V TY+ LIN
Sbjct: 158 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLIN 217

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G++  PN VT++ +IDG CK G VD A E++ +M 
Sbjct: 218 GLCKESKMDDANELFDEMLVK----GLI--PNGVTFTTLIDGHCKNGRVDFAMEIYKRML 271

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 272 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 331

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 332 TAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 391

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 392 NEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 159/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 116 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 175

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R GH      L   M       GV+  P+  TYS++I+GLCKE  +D A 
Sbjct: 176 SYNTLMNGYIRLGHLDEGFRLKSAMLAS----GVL--PDVYTYSVLINGLCKESKMDDAN 229

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   E    M     + DD
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 350 VAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 409

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N  A    TY   ++G
Sbjct: 410 MQRNGHAPSVVTYNVLMNG 428



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 118/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+      +E   L   M+
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAML 201

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GV P+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 202 ASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 261

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 262 FAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 322 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 187

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 307

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 308 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVD 367

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 368 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 400



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 145 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASG 204

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 205 VLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAM 264

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 265 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 324

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 325 CKEGDLDTAFEHRK 338



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 18  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 77

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 78  AYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 137

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 138 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLK 197

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G   D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 198 SAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 257

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++  M    +  D  TY T I GLC +  ++
Sbjct: 258 GRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 296



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 68/134 (50%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C    + + +N LM  FC  G I   + +F ++   G +    SYN L+NGY +   
Sbjct: 130 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGH 189

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G+ P V TY+ L +GL +  + + A +LF EM    +  +  T+ T
Sbjct: 190 LDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 249

Query: 373 FIDGLCVRPQVRFT 386
            IDG C   +V F 
Sbjct: 250 LIDGHCKNGRVDFA 263


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 193/384 (50%), Gaps = 17/384 (4%)

Query: 1   MRHM-HPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           + HM H    P+S +FN LL  L ++ ++D    +F  L S  +  D Y++ I+I   C+
Sbjct: 112 LHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCE 170

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G    GF +   +     +PNVV +T+LI G C +  ++ A  LF K+   G  PN  T
Sbjct: 171 AGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHT 230

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y+ L+NG  + G       +++ M       G+V  PN   Y+ +I   C +G VDKA +
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNAYAYNCLISEYCNDGMVDKAFK 284

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F +M+ + +   V+TY  LI G C    + EA  L+ ++   G+ PN+V+ N+++N  C
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC----LTGKINRVKELFVSMESMGCK 294
              KMD+A RL + +    + P   TYNTL+ G+     L G ++ VKE    ME     
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE----MEERCIA 400

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
               +Y ILI+ + +    E+A  +++ +   G+ P V TY+ L HGL      + A KL
Sbjct: 401 PSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKL 460

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F  +    +  ++  Y T I G C
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYC 484



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 185/382 (48%), Gaps = 7/382 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H  P       ++ ++     +   D  L+    +   G  P   T++ L+    +    
Sbjct: 81  HFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYF 140

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + IF   L+S    +  +F  +IKG C     V+   L   L+ FG  PNV+ Y TL
Sbjct: 141 DKAWWIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G+ ++A NLF +M      +G+V  PN  TYS++++G  K+G   +  +++  
Sbjct: 200 IDGCCKDGNVMLAKNLFCKMN----RLGLV--PNPHTYSVLMNGFFKQGLQREGFQMYEN 253

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK   + PN   Y  LI  +C+    ++A  +  EM ++G+   V++ N+++  LC+  K
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A +L+  + +  + PN  TYN L++GFC   K++    LF  ++S G      +YN 
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI GY K + +  AL L  E+  + I P+ VTY  L      +   E+A ++   M+ + 
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           +  D  TY   + GLCV   ++
Sbjct: 434 LVPDVYTYSVLLHGLCVHGNMK 455



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 41/362 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +  L+    K+ +     +LF ++N +GL P+ +TYS+L+N F K G    GF +
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + RS   PN   +  LI   C +  + +A  +F +++  G    V+TYN LI GLCR
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ L  ++        V   PN VTY+I+I+G C    +D A  LF Q+K   L
Sbjct: 311 GKKFGEAVKLVHKVNK------VGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL 364

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--------------------------- 221
           +P +VTY +LI G+    +   A  L+ EM ++                           
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE 424

Query: 222 --------GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                   G+ P+V + +V+++ LC +G M  AS+L   + +  ++PN+  YNT++ G+C
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G   R   L   M   G   +  S+   I   C++++ +EA  L  ++   G+KP+V 
Sbjct: 485 KEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544

Query: 334 TY 335
            Y
Sbjct: 545 LY 546


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++NIL+  L + +     L+L++++N  G+ P + TY  L+ C+C  G +     +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +    F PNVVT+T+L+KG   ++   +A AL  ++K  G   N  TYNTLINGLC 
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G       + K   T G       F P  +TY+ II+G  K G +  A  ++ QM  + 
Sbjct: 504 VGRVCEVGEMLKRFETEG-------FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN+VTYTS I G+C  +  + A  +L ++  +G++P++ + N ++   C+ G M +A 
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L LM++  + PN   YN+ + G+     +      +  M   G   D  +Y  LI+G+
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGF 676

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K+  V  AL LY+E+  KG  P  +T+  L HGL      + A KL  EM   D+  + 
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736

Query: 368 CTYRTFIDG 376
             Y   I+G
Sbjct: 737 LMYNMLING 745



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 181/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  + FN+++  L  +K +   +SLFK +   G+ PD +TY+ILI+  C+  ++     +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++  +   P +VT+ SL+   C    + EA  L+T++   G  PNV+TY TL+ G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L  EM   NG        N  TY+ +I+GLC  G V +  E+  + + E  
Sbjct: 469 KAAFDKAYALLAEMKQ-NG-----VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  +TY S+I+GF  A     A  +  +M  +G+ PN+V+    ++  CK    D A +
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ +    +RP+   YN+L+ GFC  G ++   ++ V M   G   +   YN  I GY 
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             K +EEAL  Y ++  +GI     TY TL  G  +      ALKL+ EM       D  
Sbjct: 643 NLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHI 702

Query: 369 TYRTFIDGLC 378
           T+     GLC
Sbjct: 703 TFTALTHGLC 712



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 7/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K    +  L +   L + G    +   + L++ +C   +V     IF   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           LR    P  VT+T LI+G   E    +A  L  +++  G  P+   +N +I GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A++LFKEM +     G+   P+  TY+I+I  LC+   + +A  L+ +M    + P +
Sbjct: 369 KDAVSLFKEMADS----GI---PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY SL+  +C     +EA  L  EM  +G  PNVV+   +M         D A  LL  
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M Q  V  N +TYNTL++G C+ G++  V E+    E+ G      +YN +ING+ K   
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A ++Y ++  KGI P +VTY +   G  +    + ALK+  +++   +  D   Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 373 FIDGLC 378
            I G C
Sbjct: 602 LIYGFC 607



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 177/400 (44%), Gaps = 42/400 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++++    K   YD  + LF  + +  + PD    S+ I   CK+   +   ++  ++ 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            + F P   TF S++  L    R+ EA  +  +L A G + +V+   TL++G C      
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL++F+E        G+V  P  VTY+++I G  +EG  +KA EL  QM+   L P+  
Sbjct: 300 KALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK-------------- 239
            +  +I G  +   W +A  L  EM D G+ P+  + N++++ LC+              
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 240 ---------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
                                NG MD A +L   M      PN  TY TLM G       
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++   L   M+  G   +D++YN LING C    V E   +      +G  PT +TYN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +G  +      A  ++ +M    +  +  TY +FIDG C
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYC 572



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 179/392 (45%), Gaps = 42/392 (10%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L +F+     GL P   TY++LI    + G     + +  ++      P+   F  +IK
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           GL  +    +A +LF ++   G  P+  TYN LI+ LC+      ALNL+++M     E 
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMN----ET 415

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
           GV  KP  VTY  ++   C  G +D+A +L+ +M  +   PNVVTYT+L+ G  +   ++
Sbjct: 416 GV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  LL EM   GV  N  + N ++N LC  G++     +L         P A TYN+++
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +GF   G +     ++  M + G   +  +Y   I+GYCK    + AL + N++  KG++
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLR 593

Query: 330 PTVVTYNTLFHGLFE-----------------------------------IRQAERALKL 354
           P +  YN+L +G  +                                   ++  E AL+ 
Sbjct: 594 PDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRF 653

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           + +M    +  DT TY T IDG      V F 
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 6/292 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+  L        V  + KR  + G  P   TY+ +IN F K G +   F ++ ++
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PN+VT+TS I G C  S    A  +   ++  G  P++  YN+LI G C+ G+ 
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL +   M            PN   Y+  I G      +++A   + +M  E ++ + 
Sbjct: 613 SHALQVLVLMLKDG------LLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDT 666

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT+LI GF    +   A  L  EMV +G  P+ ++   + + LC+NG +D+A +LLD 
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           M + D+RPN   YN L++G+   GK+     L   M       DD +Y+IL+
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 7/339 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D + + +++    K G       +F  +  S   P+    +  I  LC       A  + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            K++  G  P   T+N++++ L + G    AL++  E+     ++ VV        + ++
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA------TTLM 289

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            G C +  V KA ++F +   + L P  VTYT LI G        +A  L  +M D G+ 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+    N+++  L  +    +A  L   M    + P+AFTYN L+   C   KI     L
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M   G K    +Y+ L+  YC N  ++EA+ LY E+P KG  P VVTY TL  G   
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
               ++A  L  EM+ N V+ +  TY T I+GLCV  +V
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRV 507



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 1/225 (0%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           + +++    KEG  D A  LF +M    + P+    +  I   C   D N A  +L +M 
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           D G  P   + N +++ L K G+M+ A  + D ++    + +     TLM G+CL  ++ 
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +  ++F      G    D +Y +LI G  +    E+A  L  ++   G+ P+   +N + 
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            GL   +  + A+ LF EM  + +  D  TY   I  LC R ++R
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIR 403



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%)

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M+   + P+  + T L+     +    +A  LL EM  +G   +    +V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
             D+A RL D M   ++ P+    +  +   C     NR   +   M+  G    DF++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            +++   K   +EEAL + +EL   G K +VV   TL HG    R+  +AL +F E   +
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 362 DVAADTCTYRTFIDG 376
            +     TY   I G
Sbjct: 312 GLVPTDVTYTVLIRG 326



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 51/112 (45%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++  L+   +K+ +    L L+  + + G  PD  T++ L +  C+ G +     +   
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
           + R    PNV+ +  LI G     ++ EA  L  ++      P+  TY+ L+
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 204/419 (48%), Gaps = 44/419 (10%)

Query: 2   RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           R   P PP    +++++    ++  Y + L + + L++ G   D    +++IN  C  G 
Sbjct: 145 RSCVPIPP---MYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGC 201

Query: 62  VSLGFVIFGRI-LRSCFAPNVVTFTSLIKGLCAESR----------IVEAAALFTKLKAF 110
           V  G  +  ++ L  C A ++V++ +++KGLCA  R          +V+     +++   
Sbjct: 202 VDEGLEMLRKLPLFGCEA-DIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV------------------ 152
           GC P++  Y T+I+G+C+ GH  VA  +   M +   +  VV                  
Sbjct: 261 GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKA 320

Query: 153 -------FKPN----TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
                  ++ N     VT++I++D  C+ G VD+  EL  QM      P+V+TYT++I+G
Sbjct: 321 EELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           FC     +EA  LL  M   G +PN +S  +++  LC   +  +A  L+  M+Q    PN
Sbjct: 381 FCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPN 440

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             T+NT+++  C  G + +  EL   M   GC  D  SY+ +I+G  K  + EEAL L N
Sbjct: 441 PVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            +  KGI P V+TY+++   L    + ++ +++F  +Q   + +D   Y   I  LC R
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKR 559



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 14/381 (3%)

Query: 6   PSPP-PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           P PP   + F ++ G   + +  D  L++   + S    P    Y ++I   C+ G    
Sbjct: 111 PVPPNAYTYFPVVRGLCGRGRIADA-LAVLDEMTSRSCVPIPPMYHVIIESACRSG---- 165

Query: 65  GFVIFGRILRSCFAPNVVTFTS----LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           G+    R+L +  A      T     +I  +C +  + E   +  KL  FGCE ++++YN
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKA 176
            ++ GLC          L  EM   +  +  + +    P+   Y+ IIDG+CKEG  + A
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
            E+  +M    L PNVV Y +++ G C A+ W +A+ LL EM  +    + V+ N++++ 
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            C+NG +D    LL+ M++    P+  TY T+++GFC  G I+    L  +M S GCK +
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY I++ G C  +   +A  L + +  +G  P  VT+NT+ + L +    E+A++L  
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 357 EMQGNDVAADTCTYRTFIDGL 377
           +M  N    D  +Y T IDGL
Sbjct: 466 QMLVNGCNPDLISYSTVIDGL 486



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 32/408 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSI----------GLFPDLYTYSILINCFCKMG 60
           + S+N +L  L   K +  V  L   +  +          G  PD+  Y+ +I+  CK G
Sbjct: 221 IVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEG 280

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
              +   I  R+      PNVV + +++KG+C+  R  +A  L T++    C  + +T+N
Sbjct: 281 HHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            L++  C+ G     + L ++M     E G +  P+ +TY+ +I+G CKEG +D+A  L 
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQML----EHGCM--PDVITYTTVINGFCKEGLIDEAVMLL 394

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M      PN ++YT ++ G C    W +A+ L+  M+ QG  PN V+ N I+N LCK 
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKK 454

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G ++ A  LL  M+     P+  +Y+T++DG    GK     EL   M + G   +  +Y
Sbjct: 455 GLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           + +     +   +++ + +++ +    I+   V YN +   L + R+ + A+     M  
Sbjct: 515 SSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVS 574

Query: 361 NDVAADTCTYRTFIDG----------------LCVRPQVRFTYARRKG 392
           N    +  TY   I G                LC R  VR    RR G
Sbjct: 575 NGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLTRRFG 622



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 169/355 (47%), Gaps = 19/355 (5%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
            + L++ G    +  Y+ ++  +C++GQV     +   +      PN  T+  +++GLC 
Sbjct: 72  VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCG 128

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             RI +A A+  ++ +  C P    Y+ +I   CR+G    AL + + +      +    
Sbjct: 129 RGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTL---- 184

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             +T   +++I+ +C +G VD+  E+  ++       ++V+Y +++ G C A  W + + 
Sbjct: 185 --DTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEE 242

Query: 214 LLIEMV----------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
           L+ EMV            G  P++     I++ +CK G  + A+ +L  M    ++PN  
Sbjct: 243 LMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVV 302

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
            YNT++ G C   +  + +EL   M    C  DD ++NIL++ +C+N  V+  + L  ++
Sbjct: 303 CYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 362

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              G  P V+TY T+ +G  +    + A+ L   M       +T +Y   + GLC
Sbjct: 363 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLC 417



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 157/315 (49%), Gaps = 6/315 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N +L  +     ++    L   +       D  T++IL++ FC+ G V     +
Sbjct: 299 PNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIEL 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P+V+T+T++I G C E  I EA  L   + + GC+PN I+Y  ++ GLC 
Sbjct: 359 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCS 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T   + A  L   M            PN VT++ II+ LCK+G V++A EL  QM     
Sbjct: 419 TERWVDAEELMSRMIQQG------CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP++++Y+++I G   A    EA  LL  M+++G+ PNV++ + +   L + G++D   +
Sbjct: 473 NPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D +    +R +A  YN ++   C   + +   +    M S GC  ++ +Y  LI G  
Sbjct: 533 MFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLA 592

Query: 309 KNKEVEEALSLYNEL 323
               + EA  L +EL
Sbjct: 593 SEGLLCEAQDLLSEL 607



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 22/305 (7%)

Query: 84  FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
            ++LI+ LC   R  +A      L A G    V+ YN ++ G CR G    A  L     
Sbjct: 55  LSALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAA--- 108

Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
                  V   PN  TY  ++ GLC  G +  A  +  +M   +  P    Y  +I   C
Sbjct: 109 ------AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESAC 162

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
            +  ++ A  +L  +  +G   +  + N+++N +C  G +D    +L  +       +  
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222

Query: 264 TYNTLMDGFCLTGKINRVKEL----------FVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +YN ++ G C   +   V+EL             M   GC  D   Y  +I+G CK    
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E A  + + +P  G+KP VV YNT+  G+    + E+A +L  EM   +   D  T+   
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNIL 342

Query: 374 IDGLC 378
           +D  C
Sbjct: 343 VDFFC 347


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 200/413 (48%), Gaps = 42/413 (10%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+ M  SP  V+ +N+L+  L+ +   +    L + +  +GL   +YTY  LI  +C+ G
Sbjct: 228 MQAMGCSPNDVT-YNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKG 286

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV---------------------- 98
           Q+     +   +L     P VVT+ +++ GLC   R+                       
Sbjct: 287 QIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 346

Query: 99  -------------EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
                        EA  LF +L+     P+V+TYNTLI+GLCR G   VA+ L  EM   
Sbjct: 347 TLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKH 406

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
             +      P+  T++  + G CK G +  AKELF +M    L P+   Y + I G    
Sbjct: 407 GPD------PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
            D ++A G+  EM+ +G  P++++ NV ++ L K G +  AS L+  M+   + P+  TY
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
            +++    + G + + + LF+ M S G      +Y +LI+ Y     ++ A+  + E+  
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           KG+ P V+TYN L +GL ++R+ ++A   F EMQ   ++ +  TY   I+  C
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 191/377 (50%), Gaps = 7/377 (1%)

Query: 9   PPVSSFNILLGCLA-KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V + N +L  L  ++ + D    ++  +   G+ P + TY+ +++ FCK G V     
Sbjct: 164 PDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQ 223

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  ++     +PN VT+  L+ GL     + +A  L   +   G E +V TY+ LI G C
Sbjct: 224 LLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYC 283

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G    A  L +EM +     G V  P  VTY+ I+ GLCK G V  A++L   M  +N
Sbjct: 284 EKGQIEEASRLGEEMLSR----GAV--PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P++V+Y +LI+G+    +  EA  L  E+  + + P+VV+ N +++ LC+ G +D A 
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           RL D M++    P+ FT+ T + GFC  G +   KELF  M + G + D F+Y   I G 
Sbjct: 398 RLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 457

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  +  +A  +  E+  +G  P ++TYN    GL ++   + A +L  +M  N +  D 
Sbjct: 458 LKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDH 517

Query: 368 CTYRTFIDGLCVRPQVR 384
            TY + I    +   +R
Sbjct: 518 VTYTSIIHAHLMAGHLR 534



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 180/363 (49%), Gaps = 29/363 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K         L   + +  L PDL +Y+ LI  + ++G +   F++
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     AP+VVT+ +LI GLC    +  A  L  ++   G +P+V T+ T + G C+
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424

Query: 129 TGHTIVALNLFKEMTNGN-------------GEIGVV----------------FKPNTVT 159
            G+  +A  LF EM N               GE+ +                 F P+ +T
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++ IDGL K G + +A EL  +M Y  L P+ VTYTS+IH    A    +A+ L +EM+
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G+ P+VV+  V+++     G++  A      M +  V PN  TYN L++G C   K++
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +    F  M++ G   + ++Y ILIN  C     +EAL LY ++  + I+P   T+ +L 
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664

Query: 340 HGL 342
             L
Sbjct: 665 KHL 667



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 183/378 (48%), Gaps = 6/378 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L    K       L L  ++ ++G  P+  TY++L+N     G++     +
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR     +V T+  LI+G C + +I EA+ L  ++ + G  P V+TYNT++ GLC+
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L   M N N        P+ V+Y+ +I G  + G + +A  LF +++Y +L
Sbjct: 320 WGRVSDARKLLDVMVNKN------LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G C   D + A  L  EM+  G  P+V +    +   CK G +  A  
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P+ F Y T + G    G  ++   +   M + G   D  +YN+ I+G  
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   ++EA  L  ++ + G+ P  VTY ++ H         +A  LF+EM    +     
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553

Query: 369 TYRTFIDGLCVRPQVRFT 386
           TY   I    VR +++  
Sbjct: 554 TYTVLIHSYAVRGRLKLA 571



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 177/346 (51%), Gaps = 20/346 (5%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILR--------------SCFAPNVVTFTSLIKGLCA 93
           +YS++++   + G +   + +  +++                   P+V     L+  +  
Sbjct: 83  SYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYV 142

Query: 94  ESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
           +  ++E   L F K+ + G  P+V   N ++  L    + I   ++ +E+ N   E G+ 
Sbjct: 143 KKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNI---DVAREVYNVMVECGIC 199

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             P  VTY+ ++D  CK+G V +A +L  QM+    +PN VTY  L++G  H+ +  +AK
Sbjct: 200 --PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAK 257

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ +M+  G++ +V + + ++   C+ G+++ ASRL + M+     P   TYNT+M G 
Sbjct: 258 ELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGL 317

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  G+++  ++L   M +     D  SYN LI GY +   + EA  L+ EL ++ + P+V
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSV 377

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           VTYNTL  GL  +   + A++L  EM  +    D  T+ TF+ G C
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 170/350 (48%), Gaps = 12/350 (3%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D V S    + S+ L  DL     L+  + K   +    ++F +++     P+V     +
Sbjct: 118 DVVSSSEVSMPSVKLILDL-----LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRV 172

Query: 88  IKGLCAESRIVEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           ++ L      ++ A  ++  +   G  P V+TYNT+++  C+ G    AL L  +M    
Sbjct: 173 LRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ--- 229

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
               +   PN VTY+++++GL   G +++AKEL   M    L  +V TY  LI G+C   
Sbjct: 230 ---AMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKG 286

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
              EA  L  EM+ +G  P VV+ N IM  LCK G++ +A +LLD+MV  ++ P+  +YN
Sbjct: 287 QIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 346

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL+ G+   G I     LF  +          +YN LI+G C+  +++ A+ L +E+   
Sbjct: 347 TLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKH 406

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           G  P V T+ T   G  ++     A +LF EM    +  D   Y T I G
Sbjct: 407 GPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 6/280 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V +F   +    K  +      LF  + + GL PD + Y   I    K+G  S 
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 465

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F +   +L   F P+++T+   I GL     + EA+ L  K+   G  P+ +TY ++I+
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 525

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                GH   A  LF EM +       +F P+ VTY+++I      G +  A   F +M 
Sbjct: 526 AHLMAGHLRKARALFLEMLSKG-----IF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + ++PNV+TY +LI+G C     ++A     EM  +G+ PN  +  +++NE C  G   
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
            A RL   M+  +++P++ T+ +L+       K++ V+ L
Sbjct: 640 EALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHL 679



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 56/267 (20%)

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA---KELFLQMKYENLN 189
           +VAL  F+      G     FK + ++YS+I+D L + G +  A    E  + +K EN  
Sbjct: 62  VVALRFFRWAERQTG-----FKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGV 116

Query: 190 PNVVTYTSL----IHGFCHANDWNEAKGLLIE--------MVDQGVQPNVVSSNVIMNEL 237
            +VV+ + +    +        W   K  L+E        MV +G+ P+V + N ++  L
Sbjct: 117 IDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLL 176

Query: 238 C-KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
             ++  +D A  + ++MV+C + P   TYNT+                            
Sbjct: 177 RDRDNNIDVAREVYNVMVECGICPTVVTYNTM---------------------------- 208

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
                  ++ +CK   V+EAL L  ++   G  P  VTYN L +GL    + E+A +L  
Sbjct: 209 -------LDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQ 261

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +M    +     TY   I G C + Q+
Sbjct: 262 DMLRLGLEVSVYTYDPLIRGYCEKGQI 288


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 196/363 (53%), Gaps = 6/363 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+    K + ++    L + +   G  P + TY+ ++   C++G+VS        +
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     P++V++ +LI G        EA  LF++L++    P+V+TYNTLI+G CRTG+ 
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN- 397

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
              L++ K M +   + G+   P+ VT++I++ G C+ G +  AKELF +M    L P+ 
Sbjct: 398 ---LDIAKGMKDDMIKHGLC--PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + YT+ I G     + ++A G+  EM  +G  P++++ NV++N LCK G  D+A+ L+  
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M    + P+  TY +++    ++G + + +E+F  M   G      +Y +LI+ Y     
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGR 572

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++ A   ++E+  KG+ P V+TYN L +GL +    + A  LF EM+   V+ +  TY  
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632

Query: 373 FID 375
            I+
Sbjct: 633 LIN 635



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N L+   ++  ++   L LF  L S  L P + TY+ LI+  C+ G + +   +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    P+VVTFT L++G C    +  A  LF ++ + G +P+ I Y T I G  +
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  + +EM    G     F P+ +TY+++I+GLCK G  D A EL  +M+ E +
Sbjct: 465 LGNPSKAFGMKEEM-KAEG-----FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYTS+IH    +    +A+ +  +M+ +G+ P+VV+  V+++     G++D A +
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             D M    V PN  TYN L+ G C    ++    LF  MES G   + ++Y ILIN   
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENS 638

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
             +  ++AL LY ++  + IKP   T++ L   L
Sbjct: 639 NLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 188/389 (48%), Gaps = 11/389 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N +L  L      + V  ++  +    + P + T++ +++  CK G+V     +
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V++  L+ GL  +     A  L  ++   G + +  TYN LI G C+
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCK 289

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L +EM  G G +     P  VTY+ I+  LC+ G V  A+     M  E+L
Sbjct: 290 KEMFEEANDLRREML-GRGAL-----PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDL 343

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++V+Y +LI+G+    ++ EA  L  E+  + + P+VV+ N +++  C+ G +D A  
Sbjct: 344 MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKG 403

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M++  + P+  T+  L+ GFC  G +   KELF  M S G K D  +Y   I G  
Sbjct: 404 MKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K     +A  +  E+  +G  P ++TYN L +GL ++   + A +L  +M+   +  D  
Sbjct: 464 KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHV 523

Query: 369 TYRT-----FIDGLCVRPQVRFTYARRKG 392
           TY +      I GL  + +  F+   +KG
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKG 552



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 177/378 (46%), Gaps = 6/378 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN ++    K       + +   +   G  P+  +Y++L+N     G+      +
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++       +  T+  LI+G C +    EA  L  ++   G  P V+TYNT++  LCR
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A      M N +        P+ V+Y+ +I G  + G   +A  LF +++ +NL
Sbjct: 325 LGRVSDARRYLDVMVNED------LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+VVTY +LI G C   + + AKG+  +M+  G+ P+VV+  +++   C+ G +  A  
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P+   Y T + G    G  ++   +   M++ G   D  +YN+LING C
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    ++A  L  ++  +GI P  VTY ++ H         +A ++F +M    +     
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558

Query: 369 TYRTFIDGLCVRPQVRFT 386
           TY   I    VR ++ F 
Sbjct: 559 TYTVLIHSYAVRGRLDFA 576



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 41/364 (11%)

Query: 50  SILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA 109
            +LI  F K   +    ++F +++ +   P+V     ++K L  +S + E   +++ +  
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 110 FGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK 169
               P ++T+NT+++  C+ G    A+ +   M     +      PN V+Y+++++GL  
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD------PNDVSYNVLVNGLSG 254

Query: 170 EGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +G  D+AKEL  QM    L  +  TY  LI GFC    + EA  L  EM+ +G  P VV+
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPN---------------------------- 261
            N IM  LC+ G++ +A R LD+MV  D+ P+                            
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374

Query: 262 -------AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                    TYNTL+DG C TG ++  K +   M   G   D  ++ IL+ G+C+   + 
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
            A  L++E+  +G+KP  + Y T   G  ++    +A  +  EM+      D  TY   I
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 375 DGLC 378
           +GLC
Sbjct: 495 NGLC 498



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 6/218 (2%)

Query: 35  KRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAE 94
           + + + G  PDL TY++LIN  CK+G       +  ++      P+ VT+TS+I      
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535

Query: 95  SRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK 154
             + +A  +F+ +   G  P+V+TY  LI+     G    A   F EM +     GV   
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK----GV--S 589

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           PN +TY+ +I GLCKE  +D A  LF +M+ + ++PN  TYT LI+   +   W +A  L
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             +M+D+ ++P+  + + +M  L K+ K+    RL +L
Sbjct: 650 YKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENL 687


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 41/402 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NILL  L      D  L     +   G+ PD+ TY+ L   F  +G +S    +  ++
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L     P++VT+T+LI G C    I EA  L  +  + G + NVI YN L++ LC+ G  
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE------ 186
             AL LF EM        +  +P+ + YSI+I GLCKEGFV +A +L+ QM+ +      
Sbjct: 428 EEALTLFDEMET------LRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 187 -----------------------------NLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                                        +L  +VV Y  +I G+   +   EA  L  +
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYK 541

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+++G+ P+VV+ N ++N  C+ G +  A ++L+++    + P+  TY TLM+ +C  G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +  +      ME+        +Y +LI G C+  ++ E+L L   +  KG+ P  VTYNT
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +     + ++  +AL+L+  M  ++      TY+  I+ LC+
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 192/414 (46%), Gaps = 41/414 (9%)

Query: 5   HPSPPPVSSFN------ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           H   P V ++N      +LLG ++  +       + +++   GL PDL TY+ LI   C+
Sbjct: 335 HGVEPDVVTYNTLAKGFLLLGLMSGAR------KVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           MG +     +    L   F  NV+ +  L+  LC   RI EA  LF +++    EP+ I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 119 YNTLINGLCRTGHTIVALNLFKEM--------------------TNGN-GEIGVVFKPNT 157
           Y+ LI+GLC+ G    A  L+++M                     NGN  E    F   T
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 158 --------VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                   V Y+I+IDG  +   + +A +L+ +M    + P+VVT+ +LI+GFC   D  
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA+ +L  +  +G+ P+VV+   +MN  C+ G M      L  M    V P   TY  L+
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G C   K++   +L   M + G   D  +YN +I  +CK KE+ +AL LYN +      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           PT VTY  L + L      +   ++ V ++  ++     TY T I   C + QV
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQV 742



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 6/367 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+LL CL K    +  L+LF  + ++ L PD   YSILI+  CK G V   + ++ ++ 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+     +++ GL     I EA   F          +V+ YN +I+G  R     
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+ L+ +M     E G+   P+ VT++ +I+G C+ G + +A+++   ++ + L P+VV
Sbjct: 534 EAMQLYYKMI----ERGIT--PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+L++ +C   +  E    L EM    V P  V+  V++  LC+  KM  + +LL+ M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P++ TYNT++  FC   +I +  +L+  M    C     +Y +LIN  C   ++
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++   +   +  + I     TY T+        Q  +AL  F +M           Y   
Sbjct: 708 KDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 374 IDGLCVR 380
           I+ LC R
Sbjct: 768 INRLCKR 774



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A  +  K+K    + +V TYN+L++ +    HT +  +++        EI V   P 
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVY-------NEIKVSGAPQ 235

Query: 157 T-VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  T SI+I GLC++  ++ A   FL    + + P++V+  +++  FC     + A+   
Sbjct: 236 SECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXF 294

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             MV  G+  +  S N++++ LC  G MD A    D M +  V P+  TYNTL  GF L 
Sbjct: 295 CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G ++  +++   M   G   D  +Y  LI G+C+   +EEAL L  E   +G K  V+ Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           N L   L ++ + E AL LF EM+   +  D   Y   I GLC    V+  Y
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 15/332 (4%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D +L  F+  +S GL  D+  ++     + +   +     +  ++    F  +V T+ SL
Sbjct: 157 DLLLEKFRNWDSNGLVWDMLAFA-----YSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           +  +     + +   ++ ++K  G   +  T + LI+GLC       A++    + + N 
Sbjct: 212 LHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF---LHDSNK 265

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            +G    P+ V+ + I+   CK G +D A+  F  M    L  +  +Y  L+HG C A  
Sbjct: 266 VVG----PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGS 321

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA G   +M   GV+P+VV+ N +       G M  A +++  M+   + P+  TY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C  G I    +L     S G K +   YN+L++  CK   +EEAL+L++E+    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           ++P  + Y+ L HGL +    +RA +L+ +M+
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 12/364 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L    ++++     L +  ++  +     + TY+ L++    M    + + ++  I 
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH---NMRHTDIMWDVYNEIK 229

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            S    +  T + LI GLC +S++ +A + L    K  G  P++++ NT+++  C+ G  
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG--PSIVSINTIMSKFCKVGLI 287

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            VA + F  M   NG +      ++ +Y+I++ GLC  G +D+A      M+   + P+V
Sbjct: 288 DVARSXFCLMVK-NGLL-----HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +L  GF      + A+ ++ +M+ QG+ P++V+   ++   C+ G ++ A +L   
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            +    + N   YN L+   C  G+I     LF  ME++  + D   Y+ILI+G CK   
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+ A  LY ++  K   P       +  GLF+      A   F      D+  D   Y  
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 373 FIDG 376
            IDG
Sbjct: 522 MIDG 525



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 7/280 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    +         + + +   GL P + TY+ L+N +C++G +   F  
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P  VT+T LIKGLC ++++ E+  L   + A G  P+ +TYNT+I   C+
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+  M   N +      P  VTY ++I+ LC  G +     + + ++  N+
Sbjct: 669 GKEITKALQLYNMMLLHNCD------PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                TY ++I   C     ++A G   +M+ +G   ++   + ++N LCK G +  A  
Sbjct: 723 TLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
              +M+   V P+     T+++ F   G  + V E F++M
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE-FLAM 821


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 6/355 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           + +  L   G+ P+   +++L+    + G+++    +F  +LR    P VVTF +L+ G+
Sbjct: 228 AFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGM 287

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C  S +  A AL   +   G  P+V TY   I GLC+TG    A+ +F+EM     E G 
Sbjct: 288 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC----ERG- 342

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              PNTV  + +ID  CKEG V    EL  +M    +  ++V Y +L++GFC   D   A
Sbjct: 343 -LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA 401

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             ++ EM   G++P+ V+   +++  CK G++D A  +   M    V  +  TY  L+ G
Sbjct: 402 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 461

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               G+    + +   M   G + D+ +Y ++I+ +CKN +V+       E+  KG  P 
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 521

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           +VTYN + +G   + Q + A  L   M    V  +  TY   +DG C   +VR T
Sbjct: 522 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDT 576



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+  + K    +   +L   +   G+ PD+YTY   I   CK G++     +
Sbjct: 275 PTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEM 334

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN V  T+LI   C E  +     L  ++   G + +++ YN L+NG CR
Sbjct: 335 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 394

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++ +EM           KP+ VTY+ +IDG CKEG +D A E+  +M  E +
Sbjct: 395 VRDMKAANDIVEEMRKDG------LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGV 448

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + VTYT+LI G   A    +A+ +L EM++ G+QP+  +  ++++  CKNG +    +
Sbjct: 449 ALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK 508

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L  M      P   TYN +M+GFC  G++     L  +M ++G   +D +YNIL++G+C
Sbjct: 509 HLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHC 568

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
           K+ +V +   L +    KG+      Y +L +   + + A+
Sbjct: 569 KHGKVRDTEELKSA---KGMVSDFGVYTSLINEFVKKKSAK 606



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 8/301 (2%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + EA A +  L   G  P    +N L+  + R+G    A N+F EM           +P 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG------VQPT 276

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VT++ ++ G+CK   ++ A  L   M    + P+V TY + I G C      +A  +  
Sbjct: 277 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 336

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM ++G+ PN V    +++  CK G +     L   M    V+ +   YN L++GFC   
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 396

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +    ++   M   G K D  +Y  LI+G CK  E++ A+ +  E+  +G+    VTY 
Sbjct: 397 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 456

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR--FTYARRKGNS 394
            L  GL +  ++  A ++  EM    +  D  TY   ID  C    V+  F + +   N 
Sbjct: 457 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516

Query: 395 G 395
           G
Sbjct: 517 G 517


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 26/395 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++    ++  +D    +  R+   G  PD+ TY+ILI   C  G++ L   +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++L     P V+T+T LI+       I +A  L  ++ + G +P++ TYN ++ G+C+
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 129 TGHTIVALNLFKEM-----------------TNGNGEIGVVF---------KPNTVTYSI 162
            G    A      +                   G  E G            +PN VTYS+
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I  LC++G   +A ++   MK + LNP+   Y  LI  FC     + A G + +M+  G
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
             P++V+ N IM  LCK G+ D A  +   + +    PNA +YNT+      +G   R  
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            + + M S G   D  +YN LI+  C++  V+EA+ L  ++     +PTV++YN +  GL
Sbjct: 444 TMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGL 503

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +  +   A+++   M  N    +  TY   ++G+
Sbjct: 504 CKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 171/335 (51%), Gaps = 9/335 (2%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PD + Y+ +I+ FC+  +      +  R+    F+P+VVT+  LI  LCA  ++  A  +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +L    C P VITY  LI      G    A+ L  EM +         +P+  TY++I
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG------LQPDMYTYNVI 257

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           + G+CK G VD+A E    +   N  P++  Y  L+ G  +   W   + L+ +M+ +G 
Sbjct: 258 VRGMCKRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGC 314

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
           +PN+V+ +V+++ LC++GK   A  +L +M +  + P+A+ Y+ L+  FC  GK++    
Sbjct: 315 EPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIG 374

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
               M S G   D  +YN ++   CK    +EAL+++ +L   G  P   +YNT+F  L+
Sbjct: 375 FVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALW 434

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                 RAL + +EM  N V  D  TY + I  LC
Sbjct: 435 SSGDKIRALTMILEMLSNGVDPDRITYNSLISSLC 469



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 151/358 (42%), Gaps = 75/358 (20%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+     +   D  + L   + S GL PD+YTY++++   CK G V   F  
Sbjct: 214 PTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEF 273

Query: 69  F----------------------GR-----------ILRSCFAPNVVTFTSLIKGLCAES 95
                                  GR           I++ C  PN+VT++ LI  LC + 
Sbjct: 274 VSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGC-EPNIVTYSVLISSLCRDG 332

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
           +  EA  +   +K  G  P+   Y+ LI+  C+ G   +A+    +M      I   + P
Sbjct: 333 KAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM------ISAGWLP 386

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELF----------------------------------- 180
           + V Y+ I+  LCK+G  D+A  +F                                   
Sbjct: 387 DIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMI 446

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
           L+M    ++P+ +TY SLI   C     +EA GLL++M     QP V+S N+++  LCK 
Sbjct: 447 LEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKA 506

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            ++ +A  +L +MV    +PN  TY  L++G    G  +   EL  S+ SM     D 
Sbjct: 507 HRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQDL 564



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 39/293 (13%)

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           +N LC+TG    AL   ++M          +KP+ +  + +I GL      +KA  + ++
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRG------YKPDVILCTKLIKGLFTSKRTEKAVRV-ME 136

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +  +  +P+   Y ++I GFC ++ ++ A  +++ M  +G  P+VV+ N+++  LC  GK
Sbjct: 137 ILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGK 196

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D A +++D +++ +  P   TY  L++   + G I+    L   M S G + D ++YN+
Sbjct: 197 LDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNV 256

Query: 303 LINGYCKNKEVEEALS--------------------------------LYNELPFKGIKP 330
           ++ G CK   V+ A                                  L +++  KG +P
Sbjct: 257 IVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEP 316

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            +VTY+ L   L    +A  A+ +   M+   +  D   Y   I   C   +V
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKV 369



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP  SS+N + G L  +      L++   + S G+ PD  TY+ LI+  C+ G V     
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIG 479

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + R+ + P V+++  ++ GLC   RIV+A  +   +   GC+PN  TY  L+ G+ 
Sbjct: 480 LLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVG 539

Query: 128 RTGHTIVALNLFKEMTNGNG 147
             G    A+ L K + + N 
Sbjct: 540 YAGWRSYAVELAKSLVSMNA 559


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 197/439 (44%), Gaps = 77/439 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F I +  L +    D    +F+R++  G  PDL TY++LI+  C  GQ+     +
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 69  F-----------------------------------GRILRSCFAPNVVTFTSLIKGLCA 93
           F                                    ++    + P+VVTFT L+  LC 
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA A F  ++  G  PN+ TYNTLI GL R G    AL L   M +    +GV  
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES----VGV-- 433

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV-------------------- 193
           +P   TY+I ID   K G   KA E F +MK + + PN+V                    
Sbjct: 434 QPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 194 ---------------TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
                          TY  ++  +      +EA  LL EM+  G +P+V+  N +++ L 
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G++D A ++ D M    + P   TYNTL+ G    G++ +  ELF SM    C  +  
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTI 613

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           S+N L++ +CKN EVE AL +++++     KP V+TYNT+ +GL +  +   A   F ++
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 359 QGNDVAADTCTYRTFIDGL 377
           +   +  D  T  T + GL
Sbjct: 674 K-KSMHPDHVTICTLLPGL 691



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 191/376 (50%), Gaps = 6/376 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L K +  + V+ L K +  +GL P++YT++I I    + G++   + I
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+      P++VT+T LI  LC   ++  A  LF K+KA G +P+ + Y TL++    
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L+ FKE  +     G  + P+ VT++I++D LCK    D+A   F  M+ + +
Sbjct: 345 FGD----LDTFKEFWSQMEADG--YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN+ TY +LI G   A    +A  LL  M   GVQP   + N+ ++   K+G+   A  
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             + M    + PN    N  +      G++   K +F  +   G   D  +YN+++  Y 
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  +V+EA++L +E+   G +P V+  N+L   L++  + + A ++F  M+   ++    
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 369 TYRTFIDGLCVRPQVR 384
           TY T + GL    +V+
Sbjct: 579 TYNTLLSGLGKEGRVQ 594



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 52   LINCFCKMGQVSLGFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            L+   CK  +    + IF +  +    +P + ++  LI  L       +A  LF  +K  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 111  GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
            GC P+  T+N L+    ++G       L+KEM      I    KP+ +TY+I+I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEM------ISRRCKPDAITYNIVISSLAKS 871

Query: 171  GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              +DKA + F  +   +  P   TY  LI G        EA  L  EM D G +PN    
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 231  NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            N+++N   K G  + A +L   MV   +RP+  +Y  L+D  CL G+++     F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 291  MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
             G   D  +YN +ING  K++ +EEAL+LYNE+  +GI P + TYN+L   L      E+
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 351  ALKLFVEMQGNDVAADTCTYRTFIDG--LCVRPQVRFT 386
            A +++ E+Q   +  D  TY   I G  L   P+  +T
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 172/340 (50%), Gaps = 8/340 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           ++  ++   G   + Y+Y+ LI+   + G       ++ R++     P++ T+++L+  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIG 150
             +        L  +++  G  PNV T+   I  L R G    A  +F+ M + G G   
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCG--- 294

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ VTY+++ID LC  G ++ AKELF++MK     P+ V Y +L+  F    D + 
Sbjct: 295 ----PDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
            K    +M   G  P+VV+  ++++ LCK    D A    D+M +  + PN  TYNTL+ 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G    G+I    +L  +MES+G +   ++YNI I+ + K+ E  +A+  + ++  KGI P
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVP 470

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V  N   + L E+ +   A  +F  ++ N +A D+ TY
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 173/330 (52%), Gaps = 6/330 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++S+N L+G L +  + +    LFK + ++G  PD +T+++L+    K G+++  F +
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  ++     P+ +T+  +I  L   + + +A   F  L +    P   TY  LI+GL +
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A+ LF+EM++         KPN   ++I+I+G  K G  + A +LF +M  E +
Sbjct: 906  VGRLEEAMRLFEEMSDYGC------KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P++ +YT L+   C A   +EA     E+   G+ P+ ++ N I+N L K+ +M+ A  
Sbjct: 960  RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L + M    + P+ +TYN+LM    L G + + K ++  ++  G + D F+YN LI GY 
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             ++  E A ++Y  +   G  P + TY  L
Sbjct: 1080 LSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN+LL    K+     +  L+K + S    PD  TY+I+I+   K   +      
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+PN   +N LING  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G T  A  LFK M N         +P+  +Y+I++D LC  G VD+A   F ++K   L
Sbjct: 941  IGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +P+ + Y  +I+G   +    EA  L  EM ++G+ P++ + N +M  L   G ++ A R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            + + +    + P+ FTYN L+ G+ L+        ++ +M   GC  +  +Y  L N
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 180/405 (44%), Gaps = 44/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   N L+  L K    D    +F R+  + L P + TY+ L++   K G+V     +
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++    +PN ++F +L+   C    +  A  +F+K+    C+P+V+TYNT+I GL +
Sbjct: 600 FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK----AKELFLQMK 184
                 A   F ++            P+ VT   ++ GL K G +      A++   Q++
Sbjct: 660 ENKVNHAFWFFHQLKKS-------MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR 712

Query: 185 -------YENLNPNVVTYTSL-----------IHGFCHANDW----------NEAKGLLI 216
                  +E+L    +    +           ++G C  + +          ++ +    
Sbjct: 713 FRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAY 772

Query: 217 EMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           ++ D+     G+ P + S N ++ EL +    + A  L   M      P+AFT+N L+  
Sbjct: 773 QIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV 832

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
              +GKI  + EL+  M S  CK D  +YNI+I+   K+  +++AL  + +L     +PT
Sbjct: 833 HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             TY  L  GL ++ + E A++LF EM       +   +   I+G
Sbjct: 893 PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 6/309 (1%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + +     ++ T+ ++ K L     + +   +  K++  G   N  +YN LI+ L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            ++G    AL +++ M +         KP+  TYS ++  L K+   +    L  +M+  
Sbjct: 203 IQSGFCGEALEVYRRMVSEG------LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PNV T+T  I     A   +EA  +   M D+G  P++V+  V+++ LC  G+++NA
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M     +P+   Y TL+D F   G ++  KE +  ME+ G   D  ++ IL++ 
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK ++ +EA + ++ +  +GI P + TYNTL  GL    + E ALKL   M+   V   
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436

Query: 367 TCTYRTFID 375
             TY  FID
Sbjct: 437 AYTYNIFID 445



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           + + +  TY  I   L   G + +   +  +M+      N  +Y  LIH    +    EA
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +   MV +G++P++ + + +M  L K    +    LL  M    +RPN +T+   +  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               GKI+   E+F  M+  GC  D  +Y +LI+  C   ++E A  L+ ++   G KP 
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V Y TL     +    +   + + +M+ +    D  T+   +D LC
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLC 378


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 8/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L    K   Y   L L  ++ S G+  D  TY++L++  CK  + + G+++
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLL 260

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +   +PN +T+ S+I G   E +I  A  +F ++      PN +TYN LI+G C 
Sbjct: 261 LKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCH 320

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   AL +  EM    G      KPN V+YS +++GLC+    + +K +  +M+   +
Sbjct: 321 DGNFEQALTIL-EMMEATGP-----KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGM 374

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
               + YT++I G C     NE+  LL +M+  GV P+VV+ +V++N  C+ GK+ N   
Sbjct: 375 IVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKE 434

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++  M +  + PN+  Y TL+  +C TG +    +++V+M  +G   + F  N+L++  C
Sbjct: 435 IICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLC 494

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V  A   ++ +   G  P  +T++ + +G        +A  +F EM          
Sbjct: 495 KDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHF 554

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           TY   +  LC     +F  A+R
Sbjct: 555 TYGGLLKALC--RAGKFKEAKR 574



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 192/394 (48%), Gaps = 11/394 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + N+LLG L K +    V   FK + +  + PD+ T++ILIN  C  G++     +
Sbjct: 131 PSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYL 190

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++  S + P+VVT+ +++   C + R   A  L  ++ + G E +  TYN L++ LC+
Sbjct: 191 LKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCK 250

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +     L K+M         +  PN +TY+ II+G  KEG +  A  +F +M   NL
Sbjct: 251 NNRSAKGYLLLKKMRKR------MISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL 304

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VTY +LI G CH  ++ +A  +L  M   G +PN VS + ++N LC++ K + +  
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKS 364

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M    +      Y  ++DG C  G +N   +L   M   G   D  ++++LING+C
Sbjct: 365 ILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFC 424

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +  +++    +  ++   G+ P  + Y TL +   +      A K++V M      A+  
Sbjct: 425 RVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCF 484

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
                +  LC   +V      F +  + GN  N+
Sbjct: 485 ICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 184/383 (48%), Gaps = 7/383 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR    SP  ++ +N ++    K         +F+ ++ + L P+  TY+ LI+  C  G
Sbjct: 264 MRKRMISPNEIT-YNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDG 322

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
                  I   +  +   PN V++++L+ GLC  ++   + ++  +++  G     I Y 
Sbjct: 323 NFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYT 382

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+GLCR G    ++ L  +M       GVV  P+ VT+S++I+G C+ G +   KE+ 
Sbjct: 383 AMIDGLCRNGLLNESVKLLDKMLKD----GVV--PDVVTFSVLINGFCRVGKIKNVKEII 436

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M    L PN + YT+LI+ +C   D  EA  + + M   G   N    NV+++ LCK+
Sbjct: 437 CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKD 496

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           GK+  A      M +    PN+ T++ +++G+  +G   +   +F  M   G     F+Y
Sbjct: 497 GKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY 556

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             L+   C+  + +EA  L ++L +       VTYNT+    F+      A+ LF EM  
Sbjct: 557 GGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQ 616

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
            +V  D+ TY     GL  R ++
Sbjct: 617 RNVLPDSYTYAIIFAGLIRRGKM 639



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 6/299 (2%)

Query: 80  NVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLF 139
           N   F  LI+    E  + +A   F  +   G  P+V T N L+  L +          F
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
           KEM      +     P+  T++I+I+ LC EG + KA  L  +M+     P+VVTY +++
Sbjct: 157 KEM------LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVL 210

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
           + +C    +  A  L+ +M  +G++ +  + N+++++LCKN +      LL  M +  + 
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
           PN  TYN++++GF   GKI     +F  M  +    +  +YN LI+G+C +   E+AL++
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
              +   G KP  V+Y+ L +GL    + E +  +   M+ N +      Y   IDGLC
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 189/443 (42%), Gaps = 78/443 (17%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  ++  L +N   +  + L  ++   G+ PD+ T+S+LIN FC++G++     I  ++
Sbjct: 380 AYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKM 439

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++  APN + +T+LI   C    +VEA  ++  +   G + N    N L++ LC+ G  
Sbjct: 440 YKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKV 499

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            VA   F  M+    +IG V  PN++T+  II+G    G   KA  +F +M     +P+ 
Sbjct: 500 GVAEYFFHHMS----KIGNV--PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSH 553

Query: 193 VTYTSLIHGFCHANDWNEAKGLLI-----------------------------------E 217
            TY  L+   C A  + EAK LL                                    E
Sbjct: 554 FTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDE 613

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDG----- 271
           MV + V P+  +  +I   L + GKM  A     +L+ +  V P    Y T +DG     
Sbjct: 614 MVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAG 673

Query: 272 -------FC-----------------------LTGKINRVKELFVSMES-MGCKHDDFSY 300
                  FC                         GK+ +  ++F  M S +       +Y
Sbjct: 674 QSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATY 733

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           NIL++GY K K + +  +LYN +   GI P  +T ++L  G  +    +  LKL  +M  
Sbjct: 734 NILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLL 793

Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
           + VA D CT+   I   C   +V
Sbjct: 794 DGVAVDQCTFNMLIMKYCETDEV 816



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 179/417 (42%), Gaps = 41/417 (9%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H  PS     ++N +L    K+      ++LF  +    + PD YTY+I+     + G++
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639

Query: 63  SLGFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                 +G +L +   +P  V +T+ + GL    +   A      ++  G   ++I  N 
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           ++NG  R G    A ++F  M +G     +   P+  TY+I++ G  K+  + K   L+ 
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMMWSG-----ITISPSLATYNILLHGYAKKKNLSKCSNLYN 754

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            M    + P+ +T  SLI GFC +   +    LL +M+  GV  +  + N+++ + C+  
Sbjct: 755 IMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETD 814

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNT---------------------------------- 267
           ++  A  L+++M   D+ P+  T+++                                  
Sbjct: 815 EVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYI 874

Query: 268 -LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            L++  C  G I+   +L   ME++G    D + + L+ G  K  +VEEA  + + +  K
Sbjct: 875 ALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRK 934

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            + PT+ T+ TL H          ALKL   M   DV  D   Y   I GLC    V
Sbjct: 935 SLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDV 991



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 6/306 (1%)

Query: 38   NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI 97
            + I + P L TY+IL++ + K   +S    ++  ++R+   P+ +T  SLI G C  + +
Sbjct: 722  SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781

Query: 98   VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
                 L  K+   G   +  T+N LI   C T     A +L   M      +  +F P+ 
Sbjct: 782  DVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMN-----LFDIF-PDM 835

Query: 158  VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
             T+  II  L +   V ++  L  +M      P+   Y +L++  C     + A  L  E
Sbjct: 836  TTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDE 895

Query: 218  MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
            M   G+    V+ + ++  L K GK++ A  +LD M++  + P   T+ TLM  FC    
Sbjct: 896  MEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNES 955

Query: 278  INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
            +    +L  +M+    K D  +YN+LI+G C + +V  AL LY E+  +G+ P + TY  
Sbjct: 956  LVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCI 1015

Query: 338  LFHGLF 343
            L   +F
Sbjct: 1016 LIDAIF 1021



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 7/321 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++++NILL   AK K+     +L+  +   G+FPD  T   LI  FCK   + +G  +
Sbjct: 728  PSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKL 787

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++L    A +  TF  LI   C    + +A  L   +  F   P++ T++++I+ L R
Sbjct: 788  LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR 847

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  +  L  EM     E G +  P+   Y  +++ +C+ G +  A +L  +M+   +
Sbjct: 848  VSTVQESHLLLHEML----ERGCI--PDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +   V  ++L+ G        EAK +L  M+ + + P + +   +M+  C+N  +  A +
Sbjct: 902  SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK 961

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L D M  CDV+ +   YN L+ G C  G +    +L+  ++  G   +  +Y ILI+   
Sbjct: 962  LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021

Query: 309  KNK-EVEEALSLYNELPFKGI 328
             N   + +   L  +L  +G+
Sbjct: 1022 TNDISLAKGEVLLKDLQERGV 1042



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 159/338 (47%), Gaps = 7/338 (2%)

Query: 41   GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVE 99
            GL  DL   ++++N + +MG+++    IF  +      +P++ T+  L+ G   +  + +
Sbjct: 689  GLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSK 748

Query: 100  AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
             + L+  +   G  P+ +T ++LI G C++      L++  ++       GV    +  T
Sbjct: 749  CSNLYNIMMRTGIFPDKLTCHSLILGFCKSA----MLDVGLKLLKKMLLDGVAV--DQCT 802

Query: 160  YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            ++++I   C+   V KA +L   M   ++ P++ T+ S+I      +   E+  LL EM+
Sbjct: 803  FNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEML 862

Query: 220  DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            ++G  P+      ++N +C+ G +  A +L D M    +       + L+ G    GK+ 
Sbjct: 863  ERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVE 922

Query: 280  RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              K +   M          ++  L++ +C+N+ + EAL L + + F  +K  V+ YN L 
Sbjct: 923  EAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLI 982

Query: 340  HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             GL        ALKL+ E++   +  +  TY   ID +
Sbjct: 983  SGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%)

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           CK +   +++LI  Y +   V +AL  +  +  +G  P+V T N L   L + R+     
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             F EM    V  D  T+   I+ LCV  +++
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLK 185


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 41/402 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NILL  L      D  L     +   G+ PD+ TY+ L   F  +G +S    +  ++
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L     P++VT+T+LI G C    I EA  L  +  + G + NVI YN L++ LC+ G  
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE------ 186
             AL LF EM        +  +P+ + YSI+I GLCKEGFV +A +L+ QM+ +      
Sbjct: 428 EEALTLFDEMET------LRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 187 -----------------------------NLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
                                        +L  +VV Y  +I G+   +   EA  L  +
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYK 541

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+++G+ P+VV+ N ++N  C+ G +  A ++L+++    + P+  TY TLM+ +C  G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           +  +      ME+        +Y +LI G C+  ++ E+L L   +  KG+ P  VTYNT
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +     + ++  +AL+L+  M  ++      TY+  I+ LC+
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 192/414 (46%), Gaps = 41/414 (9%)

Query: 5   HPSPPPVSSFN------ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           H   P V ++N      +LLG ++  +       + +++   GL PDL TY+ LI   C+
Sbjct: 335 HGVEPDVVTYNTLAKGFLLLGLMSGAR------KVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           MG +     +    L   F  NV+ +  L+  LC   RI EA  LF +++    EP+ I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 119 YNTLINGLCRTGHTIVALNLFKEM--------------------TNGN-GEIGVVFKPNT 157
           Y+ LI+GLC+ G    A  L+++M                     NGN  E    F   T
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 158 --------VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                   V Y+I+IDG  +   + +A +L+ +M    + P+VVT+ +LI+GFC   D  
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA+ +L  +  +G+ P+VV+   +MN  C+ G M      L  M    V P   TY  L+
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            G C   K++   +L   M + G   D  +YN +I  +CK KE+ +AL LYN +      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           PT VTY  L + L      +   ++ V ++  ++     TY T I   C + QV
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQV 742



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 176/367 (47%), Gaps = 6/367 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+LL CL K    +  L+LF  + ++ L PD   YSILI+  CK G V   + ++ ++ 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                P+     +++ GL     I EA   F          +V+ YN +I+G  R     
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A+ L+ +M     E G+   P+ VT++ +I+G C+ G + +A+++   ++ + L P+VV
Sbjct: 534 EAMQLYYKMI----ERGIT--PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+L++ +C   +  E    L EM    V P  V+  V++  LC+  KM  + +LL+ M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
               + P++ TYNT++  FC   +I +  +L+  M    C     +Y +LIN  C   ++
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           ++   +   +  + I    VTY T+        Q  +AL  F +M           Y   
Sbjct: 708 KDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 374 IDGLCVR 380
           I+ LC R
Sbjct: 768 INRLCKR 774



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I +A  +  K+K    + +V TYN+L++ +    HT +  +++        EI V   P 
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVY-------NEIKVSGAPQ 235

Query: 157 T-VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           +  T SI+I GLC++  ++ A   FL    + + P++V+  +++  FC     + A+   
Sbjct: 236 SECTTSILIHGLCEQSKLEDAIS-FLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFF 294

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             MV  G+  +  S N++++ LC  G MD A    D M +  V P+  TYNTL  GF L 
Sbjct: 295 CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G ++  +++   M   G   D  +Y  LI G+C+   +EEAL L  E   +G K  V+ Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           N L   L ++ + E AL LF EM+   +  D   Y   I GLC    V+  Y
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 15/332 (4%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D +L  F+  +S GL  D+  ++     + +   +     +  ++    F  +V T+ SL
Sbjct: 157 DLLLEKFRNWDSNGLVWDMLAFA-----YSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           +  +     + +   ++ ++K  G   +  T + LI+GLC       A++    + + N 
Sbjct: 212 LHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF---LHDSNK 265

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
            +G    P+ V+ + I+   CK G +D A+  F  M    L  +  +Y  L+HG C A  
Sbjct: 266 VVG----PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGS 321

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA G   +M   GV+P+VV+ N +       G M  A +++  M+   + P+  TY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C  G I    +L     S G K +   YN+L++  CK   +EEAL+L++E+    
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           ++P  + Y+ L HGL +    +RA +L+ +M+
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 12/364 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +++L    ++++     L +  ++  +     + TY+ L++    M    + + ++  I 
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH---NMRHTDIMWDVYNEIK 229

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            S    +  T + LI GLC +S++ +A + L    K  G  P++++ NT+++  C+ G  
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG--PSIVSINTIMSKFCKVGLI 287

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
            VA + F  M   NG +      ++ +Y+I++ GLC  G +D+A      M+   + P+V
Sbjct: 288 DVARSFFCLMVK-NGLL-----HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTY +L  GF      + A+ ++ +M+ QG+ P++V+   ++   C+ G ++ A +L   
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
            +    + N   YN L+   C  G+I     LF  ME++  + D   Y+ILI+G CK   
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V+ A  LY ++  K   P       +  GLF+      A   F      D+  D   Y  
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 373 FIDG 376
            IDG
Sbjct: 522 MIDG 525



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 7/280 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +FN L+    +         + + +   GL P + TY+ L+N +C++G +   F  
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   P  VT+T LIKGLC ++++ E+  L   + A G  P+ +TYNT+I   C+
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL L+  M   N +      P  VTY ++I+ LC  G +     + + ++  N+
Sbjct: 669 GKEITKALQLYNMMLLHNCD------PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
               VTY ++I   C     ++A G   +M+ +G   ++   + ++N LCK G +  A  
Sbjct: 723 TLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
              +M+   V P+     T+++ F   G  + V E F++M
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE-FLAM 821


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 180/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   +K +   G    LY ++IL++ FCK G + +
Sbjct: 97  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRV 156

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 157 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 216

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ +M 
Sbjct: 217 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKRML 270

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 271 SQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 330

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M+Q ++  +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 331 TAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMII 390

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 391 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 155/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 115 KLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 174

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 175 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 228

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M       DD
Sbjct: 289 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDD 348

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 349 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKE 408

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 409 MQRDGHVPSVVTYNVLMNG 427



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLC 359



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 186

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 187 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 246

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L   M  
Sbjct: 247 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 306

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  +++ A      +  + I    V Y  L  GL +  ++  
Sbjct: 307 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVD 366

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 367 AEKMLREMLSVGLKPNXRTYTMIINEFCKKGDV 399



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 144 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 203

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 204 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 263

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 264 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGC 323

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 324 CKEGDLDTAFEHRK 337



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 90/154 (58%)

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L  +M +
Sbjct: 142 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 201

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  +  + + 
Sbjct: 202 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 261

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           A++++  M    +  D  TY T I GLC +  ++
Sbjct: 262 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 295


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 167/320 (52%), Gaps = 14/320 (4%)

Query: 8   PPPVSSFNILLGCLAKNKH-YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PP V S NIL+  L KN+   ++   LF+ + + G  PD YTY  LIN  CK+G++S   
Sbjct: 152 PPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAK 211

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   +     +P+VV++TSLI GLC  + + EA  L  ++   G EPNV TY++L++GL
Sbjct: 212 ELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGL 271

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C++GH+  A+ L + M            PN VTYS +I+GLCKEG   +A E+  +M+ +
Sbjct: 272 CKSGHSSQAMELLEVMVRRR------LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS-------SNVIMNELCK 239
            L P+   Y  +I G C A ++ EA   + EM   G+ PN  S        N+++  LC 
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           N     A +L   M    +     T++ L+  FC  G +N+   +   M   GC  D+  
Sbjct: 386 NVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGM 445

Query: 300 YNILINGYCKNKEVEEALSL 319
           +N+L+ G    K+V E   L
Sbjct: 446 WNVLMCGLWDRKKVRETTEL 465



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 166/310 (53%), Gaps = 14/310 (4%)

Query: 79  PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI-VALN 137
           P   ++ ++   L  E+ +  A   + +++  G  P V++ N LI  LC+   T+  A  
Sbjct: 118 PTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFR 177

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF+EM N         +P++ TY  +I+GLCK G + +AKEL  +M+ + L+P+VV+YTS
Sbjct: 178 LFREMPNRG------CQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTS 231

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           LIHG C +N+ +EA  LL EM+  G++PNV + + +M+ LCK+G    A  LL++MV+  
Sbjct: 232 LIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRR 291

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + PN  TY+TL++G C  GK     E+   M   G K D   Y  +I+G C     +EA 
Sbjct: 292 LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAA 351

Query: 318 SLYNELPFKGIKPT-------VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           +  +E+   GI P        V  +N +  GL       RA +L++ M+   ++ +  T+
Sbjct: 352 NFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTF 411

Query: 371 RTFIDGLCVR 380
              +   C R
Sbjct: 412 DCLVKCFCKR 421



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 181/369 (49%), Gaps = 17/369 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFV 67
           P   S+  +   L +  H    +  +K +   G+ P + + +ILI   CK  + V   F 
Sbjct: 118 PTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFR 177

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+  T+ +LI GLC   +I +A  L  +++  G  P+V++Y +LI+GLC
Sbjct: 178 LFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLC 237

Query: 128 RTGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           ++ +   A+ L +EM  NG        +PN  TYS ++DGLCK G   +A EL   M   
Sbjct: 238 QSNNLDEAIELLEEMIING-------IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRR 290

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PN+VTY++LI+G C      EA  +L  M  QG++P+      I++ LC       A
Sbjct: 291 RLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEA 350

Query: 247 SRLLDLMVQCDVRPNAFTY-------NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
           +  +D M    + PN  ++       N ++ G C      R  +L++SM + G   +  +
Sbjct: 351 ANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGT 410

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV-EM 358
           ++ L+  +CK  ++ +A  +  E+   G  P    +N L  GL++ ++     +L V E+
Sbjct: 411 FDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAEL 470

Query: 359 QGNDVAADT 367
           +   V A++
Sbjct: 471 KQKFVEAES 479



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 42/297 (14%)

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           TF ++I  L + ++   A  +  ++K   CE     + T+  G  R    + A+ +F +M
Sbjct: 52  TFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKM 111

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            +         KP   +Y  + D L +E  V +                           
Sbjct: 112 ED------FQVKPTQKSYLTVFDILVEENHVKR--------------------------- 138

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK-MDNASRLLDLMVQCDVRPN 261
                   A G   EM ++G+ P VVS N+++  LCKN + +++A RL   M     +P+
Sbjct: 139 --------AIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPD 190

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           ++TY TL++G C  GKI++ KEL   ME  G      SY  LI+G C++  ++EA+ L  
Sbjct: 191 SYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLE 250

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E+   GI+P V TY++L  GL +   + +A++L   M    +  +  TY T I+GLC
Sbjct: 251 EMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLC 307



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 12/232 (5%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN---PNVVTYTSLIHGFCHANDWNEA 211
           P  +T S++   +  E  ++K   +F     E  N    +  T+ ++IH     N +  A
Sbjct: 10  PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMD---NASRLLDLMVQCDVRPNAFTYNT 267
           +G+L  M  +  +   V+ +V +  +C+  G++    +A R+   M    V+P   +Y T
Sbjct: 70  EGMLERMKQEDCE---VTEDVFLT-ICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLT 125

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE-VEEALSLYNELPFK 326
           + D       + R    +  M   G      S NILI   CKN+E VE A  L+ E+P +
Sbjct: 126 VFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNR 185

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           G +P   TY TL +GL ++ +  +A +L  EM+   ++    +Y + I GLC
Sbjct: 186 GCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLC 237


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 196/406 (48%), Gaps = 38/406 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL  L KN   D    L   ++S G  PD  +Y+ LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R L   F P+V  + +LI G+C E    EA  L  ++   G +PNVI+Y T+IN L  
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 129 TGHTIVALNLFKEM---------------------TNGNGEI----------GVVFKPNT 157
            G+  ++L +  +M                       G+ E           GVV  PN 
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV--PNV 351

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+ ++ GLC +  +  A  +F QM+     PNV TY++LI G+  A D + A  +   
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+  G  PNVV+   +++ LC+N   + A  L++ M   +  PN  T+NT + G C +G+
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++   ++F  M + GC  +  +YN L++   K++   EA  L  ++  +GI+  +VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + +G         AL+L  +M       D  T    ID  C + +V
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 183/390 (46%), Gaps = 10/390 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  + K   ++    L   + + G+ P++ +Y+ +IN     G V L   +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     +PN+ TFTSLIKG   +    EA   + ++   G  PNV+ YN L++GLC 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 129 TGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                 A+++F +M  NG         PN  TYS +IDG  K G +D A E++  M    
Sbjct: 364 KRSLGDAVSVFNQMEINGCC-------PNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PNVV YT ++   C  + +N+A  L+  M  +   PN V+ N  +  LC +G++D A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++ D M      PN  TYN L+D      +      L   ME  G + +  +YN +I GY
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    + EAL L  ++  +G KP  +T N +     +  +   A++L   +       D 
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 368 CTYRTFIDGLCVRPQVR--FTYARRKGNSG 395
             Y + I G+C    V     Y RR  + G
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEG 626



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  ++  L+   + +  L++  ++ + G  P+L+T++ LI  F   G        
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + R++R    PNVV + +L+ GLC++  + +A ++F +++  GC PNV TY+ LI+G  +
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  ++  M T+G         PN V Y+ ++D LC+    ++A  L   M+ EN
Sbjct: 399 AGDLDGASEVWNWMITHG-------CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VT+ + I G C +   + A  +  +M + G  PN  + N +++ L K+ +   A 
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+  M    +  N  TYNT++ G+C  G +    EL   M   G K D  + NI+I+ Y
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V  A+ L + L      P ++ Y +L  G+      E A+     M    ++ + 
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631

Query: 368 CTYRTFIDGL 377
            T+   +  L
Sbjct: 632 ATWNVLVRHL 641



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 183/384 (47%), Gaps = 13/384 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F  ++G   +    +  L  F R+    + P +  Y+ +++      +  +   I+  + 
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    PNV T+  L+K LC  +R+  A  L  ++ + GC+P+ ++Y TLI+ LC+ G   
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV- 232

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
                 KE      E+ + F P+   Y+ +I+G+CKE   ++A +L  +M  + ++PNV+
Sbjct: 233 ------KEAR----ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +YT++I+    A +   +  +L +M  +G  PN+ +   ++      G    A    D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++  V PN   YN LM G C    +     +F  ME  GC  +  +Y+ LI+GY K  ++
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + A  ++N +   G  P VV Y  +   L       +A  L   MQ  +   +T T+ TF
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 374 IDGLCVRPQVRFTYA--RRKGNSG 395
           I GLC   +V +      + GNSG
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSG 486



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 6/247 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +N  ++    L + +      P+  T++  I   C  G+V  
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW 474

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F ++  S   PN  T+  L+  L  + R  EA  L   ++  G E N++TYNT+I 
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL L  +M           KP+ +T +I+ID  CK+G V+ A +L  ++ 
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGT------KPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
               +P+++ YTSLI G C      EA   L  M+ +G+ PNV + NV++  L  N    
Sbjct: 589 AGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHS 648

Query: 245 NASRLLD 251
            A + LD
Sbjct: 649 GAVQFLD 655



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 10/255 (3%)

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           +AL  FK + N        FK   +TY ++I+ L  E  +D  + L  QMK E ++ +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            + S+I  +  A    +A      M D  V+P V   N I++ L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + PN FTYN L+   C   +++   +L V M S GC  D+ SY  LI+  CK  +V
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA  L          P+V  YN L +G+ +    E A +L  EM    +  +  +Y T 
Sbjct: 233 KEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 374 IDGLCVRPQVRFTYA 388
           I+ L     V  + A
Sbjct: 288 INALSDAGNVELSLA 302


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 186/398 (46%), Gaps = 36/398 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             + S G+ P + TY+ L+  +   G++    +I  
Sbjct: 226 VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIIS 285

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +    F P++ T+  ++  +C E R   A+ +  ++K  G  P+ ++YN LI G    G
Sbjct: 286 EMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNG 342

Query: 131 HTIVALNLFKEMTNGN-------------------------------GEIGVVFKPNTVT 159
               A     EM                                    E G+V   ++VT
Sbjct: 343 DLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL--DSVT 400

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+I+G C+ G   KA  L  +M  + + P   TYTSLI+  C  N   EA  L  ++V
Sbjct: 401 YNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVV 460

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P++V  N +M+  C  G MD A  LL  M + ++ P+  TYN LM G C  GK  
Sbjct: 461 GKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFE 520

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +EL   M+  G K D  SYN LI+GY K  + + A  + +E+   G  PT++TYN L 
Sbjct: 521 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL + +  E A +L  EM+   +  +  ++ + I+ +
Sbjct: 581 KGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 187/382 (48%), Gaps = 9/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N +L  L++    +     +  +  + +  ++YT++I+IN  CK G++      
Sbjct: 189 PKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 248

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      P +VT+ +L++G     RI  A  + +++K+ G +P++ TYN +++ +C 
Sbjct: 249 LGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCN 308

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +EM      IG+V  P++V+Y+I+I G    G ++ A     +M  + +
Sbjct: 309 EGR---ASEVLREMKG----IGLV--PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGM 359

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TY +LIHG    N    A+ L+ E+ ++G+  + V+ N+++N  C++G    A  
Sbjct: 360 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFA 419

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P  FTY +L+   C   K     ELF  +   G K D    N L++G+C
Sbjct: 420 LHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 479

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               ++ A SL  E+    I P  VTYN L  GL    + E A +L  EM+   +  D  
Sbjct: 480 ATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 539

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   +   +  +  R
Sbjct: 540 SYNTLISGYSKKGDTKHAFIVR 561



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 11/376 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F+ ++    + +  D  +  F  +   G  P   T + +++   ++ ++   +V +  + 
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R     NV TF  +I  LC E ++ +A      +++FG +P ++TYNTL+ G    G   
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +  EM +        F+P+  TY+ I+  +C EG   +A E+  +MK   L P+ V
Sbjct: 279 GARMIISEMKSKG------FQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSV 329

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y  LI G  +  D   A     EMV QG+ P   + N +++ L    K++ A  L+  +
Sbjct: 330 SYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 389

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +  ++ TYN +++G+C  G   +   L   M + G K   F+Y  LI   C+  + 
Sbjct: 390 REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKT 449

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ ++  KG+KP +V  NTL  G       +RA  L  EM   ++  D  TY   
Sbjct: 450 READELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCL 509

Query: 374 IDGLCVRPQVRFTYAR 389
           + GLC   + +F  AR
Sbjct: 510 MRGLC--GEGKFEEAR 523



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 6/302 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+NIL+   + N   +T  +    +   G+ P  YTY+ LI+      ++    ++
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I       + VT+  +I G C      +A AL  ++   G +P   TY +LI  LCR
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              T  A  LF+++      +G   KP+ V  + ++DG C  G +D+A  L  +M   N+
Sbjct: 446 RNKTREADELFEKV------VGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VTY  L+ G C    + EA+ L+ EM  +G++P+ +S N +++   K G   +A  
Sbjct: 500 DPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFI 559

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + D M+     P   TYN L+ G          +EL   M+S G   +D S+  +I    
Sbjct: 560 VRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619

Query: 309 KN 310
           K+
Sbjct: 620 KS 621



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 35/284 (12%)

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           +LF E+   +  +      +T+ +  ++   C+   VD+A E F  MK +  +P   T  
Sbjct: 139 DLFDELVLAHDRLQT---KSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCN 195

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            ++      N    A     +M    ++ NV + N+++N LCK GK+  A   L +M   
Sbjct: 196 HILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESF 255

Query: 257 DVRPNAFTYNTLMDGFCLTGKIN--------------------------------RVKEL 284
            ++P   TYNTL+ G+ L G+I                                 R  E+
Sbjct: 256 GIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEV 315

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M+ +G   D  SYNILI G   N ++E A +  +E+  +G+ PT  TYNTL HGLF 
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             + E A  L  E++   +  D+ TY   I+G C     +  +A
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFA 419



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 6/199 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+  L +         LF+++   G+ PDL   + L++  C  G +   F +
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + R    P+ VT+  L++GLC E +  EA  L  ++K  G +P+ I+YNTLI+G  +
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T  A  +  EM      + + F P  +TY+ ++ GL K    + A+EL  +MK E +
Sbjct: 551 KGDTKHAFIVRDEM------LSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGI 604

Query: 189 NPNVVTYTSLIHGFCHAND 207
            PN  ++ S+I     +++
Sbjct: 605 VPNDSSFCSVIEAMSKSDN 623


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 196/406 (48%), Gaps = 38/406 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NILL  L KN   D    L   ++S G  PD  +Y+ LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R L   F P+V  + +LI G+C E    EA  L  ++   G +PNVI+Y T+IN L  
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 129 TGHTIVALNLFKEM---------------------TNGNGEI----------GVVFKPNT 157
            G+  ++L +  +M                       G+ E           GVV  PN 
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV--PNV 351

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
           V Y+ ++ GLC +  +  A  +F QM+     PNV TY++LI G+  A D + A  +   
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M+  G  PNVV+   +++ LC+N   + A  L++ M   +  PN  T+NT + G C +G+
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           ++   ++F  M + GC  +  +YN L++   K++   EA  L  ++  +GI+  +VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           + +G         AL+L  +M       D  T    ID  C + +V
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 183/390 (46%), Gaps = 10/390 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  + K   ++    L   + + G+ P++ +Y+ +IN     G V L   +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++     +PN+ TFTSLIKG   +    EA   + ++   G  PNV+ YN L++GLC 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 129 TGHTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                 A+++F +M  NG         PN  TYS +IDG  K G +D A E++  M    
Sbjct: 364 KRSLGDAVSVFNQMEINGCC-------PNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            +PNVV YT ++   C  + +N+A  L+  M  +   PN V+ N  +  LC +G++D A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++ D M      PN  TYN L+D      +      L   ME  G + +  +YN +I GY
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C    + EAL L  ++  +G KP  +T N +     +  +   A++L   +       D 
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 368 CTYRTFIDGLCVRPQVR--FTYARRKGNSG 395
             Y + I G+C    V     Y RR  + G
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEG 626



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 8/370 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  ++  L+   + +  L++  ++ + G  P+L+T++ LI  F   G        
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + R++R    PNVV + +L+ GLC++  + +A ++F +++  GC PNV TY+ LI+G  +
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
            G    A  ++  M T+G         PN V Y+ ++D LC+    ++A  L   M+ EN
Sbjct: 399 AGDLDGASEVWNWMITHG-------CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VT+ + I G C +   + A  +  +M + G  PN  + N +++ L K+ +   A 
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L+  M    +  N  TYNT++ G+C  G +    EL   M   G K D  + NI+I+ Y
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +V  A+ L + L      P ++ Y +L  G+      E A+     M    ++ + 
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631

Query: 368 CTYRTFIDGL 377
            T+   +  L
Sbjct: 632 ATWNVLVRHL 641



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 182/384 (47%), Gaps = 13/384 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F  ++G   +    +  L  F R+    + P +  Y+ +++      +  +   I+  + 
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    PNV T+  L+K LC  +R+  A  L  ++ + GC+P+ ++Y TLI+ LC+ G   
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A            E+ + F P+   Y+ +I+G+CKE   ++A +L  +M  + ++PNV+
Sbjct: 234 EA-----------RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +YT++I+    A +   +  +L +M  +G  PN+ +   ++      G    A    D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++  V PN   YN LM G C    +     +F  ME  GC  +  +Y+ LI+GY K  ++
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + A  ++N +   G  P VV Y  +   L       +A  L   MQ  +   +T T+ TF
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 374 IDGLCVRPQVRFTYA--RRKGNSG 395
           I GLC   +V +      + GNSG
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSG 486



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 6/247 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  ++  L +N  ++    L + +      P+  T++  I   C  G+V  
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW 474

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F ++  S   PN  T+  L+  L  + R  EA  L   ++  G E N++TYNT+I 
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G C  G    AL L  +M           KP+ +T +I+ID  CK+G V+ A +L  ++ 
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGT------KPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
               +P+++ YTSLI G C      EA   L  M+ +G+ PNV + NV++  L  N    
Sbjct: 589 AGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHS 648

Query: 245 NASRLLD 251
            A + LD
Sbjct: 649 GAVQFLD 655



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 10/255 (3%)

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
           +AL  FK + N        FK   +TY ++I+ L  E  +D  + L  QMK E ++ +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            + S+I  +  A    +A      M D  V+P V   N I++ L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  + PN FTYN L+   C   +++   +L V M S GC  D+ SY  LI+  CK  +V
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           +EA  L          P+V  YN L +G+ +    E A +L  EM    +  +  +Y T 
Sbjct: 233 KEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 374 IDGLCVRPQVRFTYA 388
           I+ L     V  + A
Sbjct: 288 INALSDAGNVELSLA 302


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+   +     +    L   +   G  P +YTY+ +IN  CK G+      +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +LRS  +P+  T+ SL+   C +  +VE   +F+ +++    P+++ ++++++   R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G+   AL  F    N   E G++  P+ V Y+I+I G C++G +  A  L  +M  +  
Sbjct: 388 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +VVTY +++HG C      EA  L  EM ++ + P+  +  ++++  CK G + NA  
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   M +  +R +  TYNTL+DGF   G I+  KE++  M S        SY+IL+N  C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + EA  +++E+  K IKPTV+  N++  G      A        +M       D  
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 369 TYRTFIDGL 377
           +Y T I G 
Sbjct: 622 SYNTLIYGF 630



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 189/373 (50%), Gaps = 9/373 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP   +  ++L+    K    +T   +F  + S  + PDL  +S +++ F + G +    
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           + F  +  +   P+ V +T LI+G C +  I  A  L  ++   GC  +V+TYNT+++GL
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A  LF EMT           P++ T +I+IDG CK G +  A ELF +MK +
Sbjct: 456 CKRKMLGEADKLFNEMTER------ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            +  +VVTY +L+ GF    D + AK +  +MV + + P  +S ++++N LC  G +  A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R+ D M+  +++P     N+++ G+C +G  +  +     M S G   D  SYN LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629

Query: 307 YCKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + + + + +A  L  ++  +  G+ P V TYN++ HG     Q + A  +  +M    V 
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689

Query: 365 ADTCTYRTFIDGL 377
            D  TY   I+G 
Sbjct: 690 PDRSTYTCMINGF 702



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           S F++L+    + +        F  L S G    +   + LI    ++G V L + ++  
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           I RS    NV T   ++  LC + ++ +     ++++  G  P+++TYNTLI+     G 
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A  L   M  G G     F P   TY+ +I+GLCK G  ++AKE+F +M    L+P+
Sbjct: 286 MEEAFELMNAMP-GKG-----FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
             TY SL+   C   D  E + +  +M  + V P++V  + +M+   ++G +D A    +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            + +  + P+   Y  L+ G+C  G I+    L   M   GC  D  +YN +++G CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            + EA  L+NE+  + + P   T   L  G  ++   + A++LF +M+   +  D  TY 
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 372 TFIDGL 377
           T +DG 
Sbjct: 520 TLLDGF 525



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V + NI++  L K+   + V +   ++   G++PD+ TY+ LI+ +   G +   F +  
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +    F+P V T+ ++I GLC   +   A  +F ++   G  P+  TY +L+   C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
             +    +F +M + +    VV  P+ V +S ++    + G +DKA   F  +K   L P
Sbjct: 355 DVVETEKVFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           + V YT LI G+C     + A  L  EM+ QG   +VV+ N I++ LCK   +  A +L 
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M +  + P+++T   L+DG C  G +    ELF  M+    + D  +YN L++G+ K 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +++ A  ++ ++  K I PT ++Y+ L + L        A +++ EM   ++       
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588

Query: 371 RTFIDGLC 378
            + I G C
Sbjct: 589 NSMIKGYC 596



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 8/360 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  F+ ++    ++ + D  L  F  +   GL PD   Y+ILI  +C+ G +S+   +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L+   A +VVT+ +++ GLC    + EA  LF ++      P+  T   LI+G C+
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A+ LF++M           + + VTY+ ++DG  K G +D AKE++  M  + +
Sbjct: 493 LGNLQNAMELFQKMKEKR------IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P  ++Y+ L++  C      EA  +  EM+ + ++P V+  N ++   C++G   +   
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDDFSYNILING 306
            L+ M+     P+  +YNTL+ GF     +++   L   ME    G   D F+YN +++G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +C+  +++EA  +  ++  +G+ P   TY  + +G         A ++  EM     + D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + + N L+G L +    +    +++ ++  G+  ++YT +I++N  CK G++        
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++      P++VT+ +LI    ++  + EA  L   +   G  P V TYNT+INGLC+ G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  +F EM            P++ TY  ++   CK+G V + +++F  M+  ++ P
Sbjct: 320 KYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           ++V ++S++  F  + + ++A      + + G+ P+ V   +++   C+ G +  A  L 
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + M+Q     +  TYNT++ G C    +    +LF  M       D ++  ILI+G+CK 
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             ++ A+ L+ ++  K I+  VVTYNTL  G  ++   + A +++ +M   ++     +Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553

Query: 371 RTFIDGLCVR 380
              ++ LC +
Sbjct: 554 SILVNALCSK 563



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 6/330 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           + +LI  + +  ++      F  +    F  ++    +LI  L     +  A  ++ ++ 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             G   NV T N ++N LC+ G          ++     E GV   P+ VTY+ +I    
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ----EKGVY--PDIVTYNTLISAYS 281

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
            +G +++A EL   M  +  +P V TY ++I+G C    +  AK +  EM+  G+ P+  
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +   ++ E CK G +    ++   M   DV P+   ++++M  F  +G +++    F S+
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           +  G   D+  Y ILI GYC+   +  A++L NE+  +G    VVTYNT+ HGL + +  
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             A KLF EM    +  D+ T    IDG C
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHC 491



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 8/289 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N +L  L K K       LF  +    LFPD YT +ILI+  CK+G +     +F 
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++       +VVT+ +L+ G      I  A  ++  + +    P  I+Y+ L+N LC  G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           H   A  ++ EM + N       KP  +  + +I G C+ G     +    +M  E   P
Sbjct: 565 HLAEAFRVWDEMISKN------IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--GVQPNVVSSNVIMNELCKNGKMDNASR 248
           + ++Y +LI+GF    + ++A GL+ +M ++  G+ P+V + N I++  C+  +M  A  
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           +L  M++  V P+  TY  +++GF     +     +   M   G   DD
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 17/248 (6%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-----------------KYENLNPNVVTY 195
           FK  +++ S +I  L + G +  A+   L+M                  + N   N   +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
             LI  +  A    EA      +  +G   ++ + N ++  L + G ++ A  +   + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             V  N +T N +++  C  GK+ +V      ++  G   D  +YN LI+ Y     +EE
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L N +P KG  P V TYNT+ +GL +  + ERA ++F EM  + ++ D+ TYR+ + 
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348

Query: 376 GLCVRPQV 383
             C +  V
Sbjct: 349 EACKKGDV 356


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 192/409 (46%), Gaps = 33/409 (8%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRL----NSIGLFPDLYTYSILINCF 56
           +R MH   P   + N+LL  L K+   D  L L+ ++    +  G   D YT SI++   
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGL 215

Query: 57  CKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           C +G++  G  +       C  P+VV +  +I G C +  +  A     +LK  G  P V
Sbjct: 216 CNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTV 275

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMT---------------NGNGEIGVVFK------- 154
            TY  LING C+ G       L  EM                +   + G+V +       
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 155 -------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                  P+  TY+I+I+  CK G +++A EL  + K   L PN  +YT L+H +C   D
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGD 395

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
           + +A G+L  + + G + ++VS    ++ +   G++D A  + + M++  V P+A  YN 
Sbjct: 396 YVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNI 455

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           LM G C  G+I  +K L   M     + D + +  LI+G+ +N E++EA+ ++  +  KG
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + P +V YN +  G  +  +   AL    EM     A D  TY T IDG
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDG 564



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 178/346 (51%), Gaps = 6/346 (1%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
            + +R+  +G  PD+ TY+I+IN  CK G++     +  +       PN  ++T L+   
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
           C +   V+A+ +  ++   G + ++++Y   I+G+   G   VAL + ++M     E GV
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM----EKGV 446

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
              P+   Y+I++ GLCK+G +   K L  +M   N+ P+V  + +LI GF    + +EA
Sbjct: 447 F--PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEA 504

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +   ++ +GV P +V  N ++   CK GKM +A   L+ M      P+ +TY+T++DG
Sbjct: 505 IKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDG 564

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           +     ++   ++F  M     K +  +Y  LING+CK  ++  A  +++ +    + P 
Sbjct: 565 YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPN 624

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           VVTY TL  G F+  + ERA  +F  M  N    +  T+   I+GL
Sbjct: 625 VVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 20/329 (6%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D  L + +++   G+FPD   Y+IL++  CK G++    ++   +L     P+V  F +L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATL 491

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I G      + EA  +F  +   G +P ++ YN +I G C+ G    AL+   EM +   
Sbjct: 492 IDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNS--- 548

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
              V   P+  TYS +IDG  K+  +  A ++F QM      PNV+TYTSLI+GFC   D
Sbjct: 549 ---VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 605

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
              A+ +   M    + PNVV+   ++    K GK + A+ + +LM+     PN  T++ 
Sbjct: 606 MIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHY 665

Query: 268 LMDGFCLTG--------------KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           L++G   T               + + + + F  M   G      +YN +I   CK+  V
Sbjct: 666 LINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTV 725

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           + A  L  ++  KG     V +  L HGL
Sbjct: 726 DTAQLLLTKMLTKGFLIDSVCFTALLHGL 754



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 168/373 (45%), Gaps = 13/373 (3%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG--RILR 74
           LL  LA  + +  +  + + + +  L P    +S LI  + + G +     +F   R + 
Sbjct: 101 LLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMH 160

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL----KAFGCEPNVITYNTLINGLCRTG 130
           +CF P  V    L+ GL    ++  A  L+ K+       G   +  T + ++ GLC  G
Sbjct: 161 NCF-PTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLG 219

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
                  L K         G    P+ V Y++IIDG CK+G +  A     ++K + + P
Sbjct: 220 KIEEGRRLIKH------RWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLP 273

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
            V TY +LI+GFC A ++     LL EM  +G+  NV   N +++   K G +  A+ +L
Sbjct: 274 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEML 333

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    P+  TYN +++  C  G+I    EL    +  G   + FSY  L++ YCK 
Sbjct: 334 RRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKK 393

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +  +A  +   +   G K  +V+Y    HG+    + + AL +  +M    V  D   Y
Sbjct: 394 GDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIY 453

Query: 371 RTFIDGLCVRPQV 383
              + GLC + ++
Sbjct: 454 NILMSGLCKKGRI 466



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 28/291 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N ++    K       LS    +NS+   PD YTYS +I+ + K   +S    +
Sbjct: 518 PGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKM 577

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++++  F PNV+T+TSLI G C ++ ++ A  +F+ +K+F   PNV+TY TL+ G  +
Sbjct: 578 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFK 637

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL--------------CKEGFVD 174
            G    A ++F E+   NG +     PN  T+  +I+GL               KE    
Sbjct: 638 AGKPERATSIF-ELMLMNGCL-----PNDATFHYLINGLTNTATSPVLIEEKDSKENERS 691

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
              + F  M  +  +  +  Y S+I   C     + A+ LL +M+ +G   + V    ++
Sbjct: 692 LILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALL 751

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRP----NAFTYNTLMDGFCLTGKINRV 281
           + LC  GK    S+    ++ CD+       A  Y+  +D +   G+++  
Sbjct: 752 HGLCHKGK----SKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 798



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 31/253 (12%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+    K         +F  + S  L P++ TY+ L+  F K G+   
Sbjct: 584 HKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPER 643

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF  +L +   PN  TF  LI GL                       N  T   LI 
Sbjct: 644 ATSIFELMLMNGCLPNDATFHYLINGLT----------------------NTATSPVLIE 681

Query: 125 GL-CRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
               +     + L+ F  M  +G  ++          Y+ +I  LCK G VD A+ L  +
Sbjct: 682 EKDSKENERSLILDFFTMMLLDGWDQV-------IAAYNSVIVCLCKHGTVDTAQLLLTK 734

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  +    + V +T+L+HG CH     E + ++   +++      V  ++ +++    G+
Sbjct: 735 MLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGR 794

Query: 243 MDNASRLLDLMVQ 255
           +  AS +L  +V+
Sbjct: 795 LSEASVILQTLVE 807


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 36/405 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG--- 65
           P V ++N+L+  L +N   D    +   ++  G  PD  ++  +++  CK+G+V      
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214

Query: 66  ---------------------------FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                                      F +   +++    PNVVT+T+++   C    + 
Sbjct: 215 LAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 274

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A A+  ++ + GC PNV+T+  L+ G    G    AL+++  M +        + P+T+
Sbjct: 275 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG------WAPSTI 328

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+++I GLC  G +  A + F  MK   L PN  TY++L+ GF +A D + A  +  EM
Sbjct: 329 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G +PNVV    +++ LCK    D A  L+D M+  +  PN  T+NTL+   C  G++
Sbjct: 389 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 448

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            R   +F  M   GC  +D +YN L++G  +    ++A ++  E+   G + ++VTYNT+
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            + L ++   + A+ L   M    +  D  T+   I   C   +V
Sbjct: 509 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 553



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S+N ++  L        V S+   +   GL P++ TY+ +++ FCK  ++ +   I
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++     PNV+TFT+L+KG   + ++ +A +++  +   G  P+ I+YN LI GLC 
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+ F  M            PN  TYS ++DG    G +D A  ++ +MK    
Sbjct: 340 IGDLKGALDFFNSMKRN------ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 393

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV YT++I   C    +++A+ L+ +M+     PN V+ N ++  LC  G++  A  
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 453

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +    PN  TYN L+ G    G       + + M + G +    +YN +IN  C
Sbjct: 454 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 513

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    + A+ L   +  +GI+P   T+N + H   +  +   A  L  +M   +   +  
Sbjct: 514 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 573

Query: 369 TYRTFIDGLC 378
            Y   I  LC
Sbjct: 574 AYTILISELC 583



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 12/362 (3%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +G  A+    D  L  F R + +G   P +  Y+ L++   +   V     ++  + ++ 
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             PNV T+  LI+ LC   R+  A  +  ++   GC P+ +++ T+++G+C+ G    A 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
               E             P   +Y+ ++  LC E  + +   +  +M    L PNVVTYT
Sbjct: 213 GFLAETV-----------PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 261

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +++  FC A +   A  +L  MV  G  PNV++   ++    ++GK+ +A  +   MV  
Sbjct: 262 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 321

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P+  +YN L+ G C  G +    + F SM+      +  +Y+ L++G+    +++ A
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + ++NE+   G KP VV Y  +   L +    ++A  L  +M  ++   +T T+ T I  
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441

Query: 377 LC 378
           LC
Sbjct: 442 LC 443



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 41/335 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N+L+  L         L  F  +    L P+  TYS L++ F   G +    +I
Sbjct: 325 PSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  S   PNVV +T++I  LC +    +A +L  K+    C PN +T+NTLI  LC 
Sbjct: 385 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCD 444

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    ALN+F  M   NG       PN  TY+ ++ GL +EG    A  + ++M     
Sbjct: 445 CGRVGRALNVFHGMRR-NG-----CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 498

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++VTY ++I+  C       A  LL  M+ QG+QP+  + N I++  CK GK+  A+ 
Sbjct: 499 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA- 557

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                                   CL G++N V           C  +  +Y ILI+  C
Sbjct: 558 ------------------------CLLGQMNAVN----------CPRNVVAYTILISELC 583

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              ++  A+    ++ ++GI P   T+N L   +F
Sbjct: 584 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 6/199 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M   PP   +FN L+G L         L++F  +   G  P+  TY+ L++   + G   
Sbjct: 425 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F +   +L + F  ++VT+ ++I  LC       A  L  ++   G +P+  T+N +I
Sbjct: 485 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 544

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +  C+ G   +A  L  +M        V    N V Y+I+I  LC +G +  A    L+M
Sbjct: 545 HAYCKEGKVSIAACLLGQMN------AVNCPRNVVAYTILISELCNQGKLSNAMVYLLKM 598

Query: 184 KYENLNPNVVTYTSLIHGF 202
            YE + PN  T+  L+   
Sbjct: 599 LYEGICPNEATWNVLVRAI 617



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 66/128 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++ CL +       + L  R+   G+ PD +T++ +I+ +CK G+VS+   + G++
Sbjct: 504 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 563

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  NVV +T LI  LC + ++  A     K+   G  PN  T+N L+  +     T
Sbjct: 564 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGT 623

Query: 133 IVALNLFK 140
           I  ++LFK
Sbjct: 624 IGPIHLFK 631


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++NI++  L K K       L KR+  + L PD  +Y+ LI+ F   G+++L   IF ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           LR    P+V T+T+LI G C   R  EA  +  +++  G  P+ +TY+ L+NG C+    
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKL 420

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL+L K + + +  I      N   Y+I+IDG C+ G V KAK++   M  + ++P+V
Sbjct: 421 GPALDLIKYLRSRSISI------NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY++LI+G C     +E K +L  M   GV PN V    ++   CK G    A +    
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  +  N+  +N L+  F   G I   ++    M  M    D  S+N +I+ YC+   
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 594

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V EA S+Y+ +   G  P + TY +L  GL +     +A +  V +     A D  T  T
Sbjct: 595 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 654

Query: 373 FIDGLC 378
            + G+C
Sbjct: 655 LLVGIC 660



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 189/435 (43%), Gaps = 65/435 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ LL    K+      L L K L S  +  +   Y+ILI+ FC++G+VS    I
Sbjct: 402 PSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQI 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L     P+V+T+++LI G+C    I E   + ++++  G  PN + Y TL+   C+
Sbjct: 462 LKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCK 521

Query: 129 TGHTIVALNLFKEMTNG------------------NGEIGVV--FKP---------NTVT 159
            GH   AL  F ++                      G I     FK          +  +
Sbjct: 522 AGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVAS 581

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++ IID  C+ G V +A  ++  M      P++ TY SL+ G C      +AK  ++ ++
Sbjct: 582 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 641

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI- 278
           ++    +  + N ++  +CK+G +D A  L + MV  ++ P+ +TY  L+DGFC  GK+ 
Sbjct: 642 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 279 -------------------------------NRVKELFVSMESMGCKH----DDFSYNIL 303
                                           +VK      + + CK     D  +YN +
Sbjct: 702 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 761

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           +NGY K  ++ E   L   +    + P+  +YN L HG  +  Q  R L L+ +M    +
Sbjct: 762 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821

Query: 364 AADTCTYRTFIDGLC 378
             D  TYR  I GLC
Sbjct: 822 KPDNVTYRLLIFGLC 836



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 173/333 (51%), Gaps = 8/333 (2%)

Query: 43  FP-DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA 101
           FP D+ T +I++N  C  G++S    +  + +++C  PN VT+ +++     + R   A 
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSAL 284

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
            +   ++  G E ++ TYN +I+ LC+   +  A  L K M   N        P+  +Y+
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYN 338

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I G   EG ++ A  +F QM  ++L P+V TYT+LI G+C     +EA+ +L EM   
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           GV+P+ ++ + ++N  CK+ K+  A  L+  +    +  N   Y  L+DGFC  G++++ 
Sbjct: 399 GVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKA 458

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           K++   M + G   D  +Y+ LING CK   + E   + + +   G+ P  V Y TL   
Sbjct: 459 KQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFY 518

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
             +   A+ ALK FV++  + + A++  +   +
Sbjct: 519 FCKAGHAKEALKYFVDIYRSGLVANSVIHNALL 551



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 183/379 (48%), Gaps = 13/379 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V++ NI+L  L          S+ +++ +  L P+  TY+ ++N + K G+      
Sbjct: 227 PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALR 285

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   + ++    ++ T+  +I  LC   R   A  L  +++     P+  +YNTLI+G  
Sbjct: 286 ILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFF 345

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             G   +A+ +F +M   +       KP+  TY+ +IDG C+ G  D+A+ +  +M+   
Sbjct: 346 GEGKINLAIYIFNQMLRQS------LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITG 399

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+ +TY++L++G+C  +    A  L+  +  + +  N     ++++  C+ G++  A 
Sbjct: 400 VRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAK 459

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L  M+   + P+  TY+ L++G C  G I+  KE+   M+  G   ++  Y  L+  +
Sbjct: 460 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 519

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVA 364
           CK    +EAL  + ++   G+    V +N L    +    I +AE+  +    M+   ++
Sbjct: 520 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK---IS 576

Query: 365 ADTCTYRTFIDGLCVRPQV 383
            D  ++   ID  C R  V
Sbjct: 577 FDVASFNCIIDSYCQRGNV 595



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 11/373 (2%)

Query: 8   PPPVSSFNILLGCLAKN-KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           P  + S ++L+    K  K  D   ++F  ++  G    L++ + ++N    + +    +
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIF-FMDECGFKASLFSCNNILNALVGINKSEYVW 215

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCE-PNVITYNTLING 125
           +     L   F  +V T   ++  LC + ++ +A ++  K+K   C  PN +TYNT++N 
Sbjct: 216 LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILNW 273

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
             + G    AL +  +M   NG      + +  TY+I+ID LCK     +A  L  +M+ 
Sbjct: 274 YVKKGRCKSALRILDDMEK-NG-----IEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            NL P+  +Y +LIHGF      N A  +  +M+ Q ++P+V +   +++  C+NG+ D 
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A R+L  M    VRP+  TY+ L++G+C   K+    +L   + S     +   Y ILI+
Sbjct: 388 ARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILID 447

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G+C+  EV +A  +   +   GI P V+TY+ L +G+ ++       ++   MQ + V  
Sbjct: 448 GFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 507

Query: 366 DTCTYRTFIDGLC 378
           +   Y T +   C
Sbjct: 508 NNVLYTTLVFYFC 520



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 46/397 (11%)

Query: 13   SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
            + N LL  + K+   D  L L +++ +  + PD YTY+IL++ FCK G+V    ++   +
Sbjct: 651  TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 710

Query: 73   LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGH 131
            L     P+ + +T L+ GL  E ++  A+ +F ++    G   + I YN+++NG  + G 
Sbjct: 711  LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 770

Query: 132  TIVALNLFKEMTNGN------------------GEIGVVF-----------KPNTVTYSI 162
                  L + M                      G++               KP+ VTY +
Sbjct: 771  INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 830

Query: 163  IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN---------------- 206
            +I GLC+ G ++ A +   +M  E + P+ + +  LI  F   +                
Sbjct: 831  LIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVG 890

Query: 207  DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            D + A  L  +M   GV P+ V+ + I+  LCK GK++ A  +   +++  + P   T+ 
Sbjct: 891  DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 950

Query: 267  TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
            TLM G C   KI+    L   MES G K D  +YN+LI G C  K + +AL LY E+  K
Sbjct: 951  TLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 1010

Query: 327  GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
            G+ P + TY TL   ++     +   KL  +++   +
Sbjct: 1011 GLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 1047



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 186/426 (43%), Gaps = 47/426 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++ L+  + K         +  R+   G+ P+   Y+ L+  FCK G        
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 69  FGRILRSCFAPN-----------------------------------VVTFTSLIKGLCA 93
           F  I RS    N                                   V +F  +I   C 
Sbjct: 532 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              ++EA +++  +   G  P++ TY +L+ GLC+ GH + A      +      I    
Sbjct: 592 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI---- 647

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             +  T + ++ G+CK G +D+A +L  +M   N+ P+  TYT L+ GFC       A  
Sbjct: 648 --DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALI 705

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGF 272
           LL  M+++G+ P+ ++   ++N L   G++  AS +  +++ +  +  +   YN++M+G+
Sbjct: 706 LLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGY 765

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G+IN ++ L  +M          SYNIL++GY K  ++   L LY ++  +GIKP  
Sbjct: 766 LKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDN 825

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTY 387
           VTY  L  GL E    E A+K   +M    V  D   +   I     + ++      F+Y
Sbjct: 826 VTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSY 885

Query: 388 ARRKGN 393
            +  G+
Sbjct: 886 MKWVGD 891



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 24/268 (8%)

Query: 1    MRHMHPSP--PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
            MR+MH +   P  +S+NIL+    K       L L++ +   G+ PD  TY +LI   C+
Sbjct: 778  MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 837

Query: 59   MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT------------- 105
             G + +      +++     P+ + F  LIK    +S++  A  LF+             
Sbjct: 838  YGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFE 897

Query: 106  ---KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
                +KA G  P+ +  ++++ GLC+ G    A+ +F  +       G+V  P   T++ 
Sbjct: 898  LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA----GMV--PTIATFTT 951

Query: 163  IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            ++ GLCKE  +D A  L   M+   L  +VVTY  LI G C+     +A  L  EM  +G
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 1011

Query: 223  VQPNVVSSNVIMNELCKNGKMDNASRLL 250
            + PN+ +   +   +   G M +  +LL
Sbjct: 1012 LLPNITTYITLTGAMYATGTMQDGEKLL 1039


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 186/403 (46%), Gaps = 36/403 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V +FN +L  LA+ +    +  ++  +     + PD+ TY IL+N  CK G+V     + 
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 70  GRILRSCF--APNVVTFTSLIKGLCAESRIVEAAALFTKLKA--FGCEPNVITYNTLING 125
             + R      P+VVT  +++ GLC   R+ EA A   +  +   GC PN +TYN LI+ 
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255

Query: 126 LCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-------------K 154
            CR G+  +A  L ++M N                    G  G                K
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VTYS ++  L     V  A ELF +   E  +P+ + Y ++I G   A    +A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G + +  + N+++   C+  ++  A  LL  M +  +RP+  TYNTL+ G C 
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G    V EL   M   GC+    ++  L++GYCK  +++EAL +   +   GI P  V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YNTL   L +    + A++LF EM+   V A+  T+   + GL
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 187/376 (49%), Gaps = 12/376 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSI-GLFPDLYTYSILINCFCKMGQVSLGF 66
           P V + N ++  L K+      L+   +R++S+ G  P+  TY+ LI+ FC++G +S+ +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--NVITYNTLIN 124
            +  ++       N+VT  +++ GLC   R   A   F + +    E   N +TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 125 GLCRTGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            L  T +  +A+ LF E M+ G+        P+ + Y  +I GL + G ++ A  +   M
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGH-------SPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K      +   Y  LI GFC     +EA  LL EM + G++P+V + N +++  CK G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                LL  M+    +P+  T+ TL+ G+C  GKI+    +  SM+  G   ++  YN L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+  CK  +V+ A+ L++E+  K +   V T+N L  GL +    E+A +L  +M+    
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 364 AADTCTYRTFIDGLCV 379
             D  T    ++ L V
Sbjct: 560 FPDYVTVDVLMEWLPV 575



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPF-KGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           D F++N ++    + ++V     +Y  +     ++P VVTY  L +GL +  +   AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 355 FVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              M  Q  D+  D  T  T +DGLC   +V+   A
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA 230


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 189/370 (51%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++N++L  L K   +  V  +++R+ +  L PD+ TY ILI+  C+ G V     +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  I+++    +   + SL+KG C   R+ EA   F     F    N+ TYN +I GL  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFD 380

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A+ L+  +     E  V   P+TVT+  +I GLC+ GF +KA  +F + +    
Sbjct: 381 SGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V +Y+S+I+G C+     +A  +  +M   G +PN    N +++  C+  +  +A R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M      P   TYNTL+DG C   K      +   M   G   D  +Y  LI G  
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
            +K++++ALS++ ++ +KG+K  V+ +N L HGL    + + AL +F +M +  +   + 
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 368 CTYRTFIDGL 377
            TY T +DGL
Sbjct: 616 VTYNTLMDGL 625



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 8/336 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLN-SIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           + ++NI++  L  +   D  + L+  L   +   PD  T+  LI+  C+ G  +  F IF
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                S    +V +++S+I GLC   R+V+A  ++ K+   GC+PN   YN LI+G C+ 
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
             T  A+ ++ +M + NG       P  +TY+ +IDGLCK     +A  +  +M      
Sbjct: 488 YRTSDAVRIYSKMAD-NG-----CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P++ TY SLI G       ++A  +  +++ +G++ +V+  N++++ LC  GK+D A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 250 L-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             D+  + +  PN  TYNTLMDG   TG I++   L+ S+   G + D  SYN  I G C
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
               + E + L +E+  +GI PTV+T+N L   + +
Sbjct: 662 SCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 188/372 (50%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V  +N LLG   K   ++ V+ ++ +L    G  P+L TY+++++  CK G+      
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R++ +   P+V+T+  LI GLC    +  AA +++++   G   +   YN+L+ G C
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC 345

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYE 186
           + G    A   +          G     N  TY+I+I GL   G VD+A EL+ L  K  
Sbjct: 346 QAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+ VT+ +LIHG C     N+A  +  E    G Q +V S + ++N LC  G++ +A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            ++ + M +   +PN+  YN L+ GFC   + +    ++  M   GC     +YN LI+G
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK ++ +EA S+  E+   G  P + TY +L  GLF  ++ + AL ++ ++    +  D
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578

Query: 367 TCTYRTFIDGLC 378
              +   I GLC
Sbjct: 579 VMMHNILIHGLC 590



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 194/411 (47%), Gaps = 48/411 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-----PDLYTYSILINCFCKMGQVS 63
           P + S N LL    + + +    + F  L S G F     P+L TY+I++   C  G + 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  + R   AP+ +T+++L+ GL  + R+  A  L  ++     +P+V+ YN L+
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL 235

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G  + G     + ++ ++    G      +PN  TY++++DGLCK G   +  E++ +M
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGA-----RPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--------------------V 223
              NL P+V+TY  LIHG C + D + A  +  E++  G                    V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 224 QP--------------NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR--PNAFTYNT 267
           Q               N+ + N+++  L  +G +D A  L DL+ + DV   P+  T+ T
Sbjct: 351 QEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL-EKDVACIPDTVTFGT 409

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C  G  N+   +F      G + D FSY+ +ING C    + +A+ +Y ++   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KP    YN L  G  ++ +   A++++ +M  N  +    TY T IDGLC
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 46/330 (13%)

Query: 91  LCAESRIVEAAALFTKLKAF----GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L A SR +   A     +A     GC P + ++N L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
              G    PN  TY+I++  LC  G +D+A  LF  ++   + P+ +TY++L+ G    +
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTY 265
             + A  LL EM    VQP+VV  N ++    K G+ +   R+ D +V+    RPN  TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL-- 323
           N ++DG C  G+   V E++  M +   + D  +Y ILI+G C++ +V+ A  +Y+E+  
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 324 ---------------------------------PFKGIKPTVVTYNTLFHGLFEIRQAER 350
                                             F G++  + TYN +  GLF+    + 
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 351 ALKLFVEMQGNDVA--ADTCTYRTFIDGLC 378
           A++L+ ++   DVA   DT T+ T I GLC
Sbjct: 387 AIELW-DLLEKDVACIPDTVTFGTLIHGLC 415



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 42/307 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  L +N   +   ++F+     G   D+++YS +IN  C +G++     +
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++ +    PN   + +LI G C   R  +A  +++K+   GC P VITYNTLI+GLC+
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY---------------------------- 160
                 A ++ +EM   NG     F P+  TY                            
Sbjct: 522 AEKYQEASSVAREMVE-NG-----FTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 161 -------SIIIDGLCKEGFVDKAKELFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAK 212
                  +I+I GLC  G VD+A  +F  MK  +N  PN+VTY +L+ G       ++A 
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   + + G++P+++S N  +  LC   ++    +LLD ++   + P   T+N L+   
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695

Query: 273 CLTGKIN 279
              G I 
Sbjct: 696 IKYGPIQ 702



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 7/251 (2%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKY----ENLNPNVVTYTSLIHGFCHANDWNE 210
           P   +++ ++D   +      A   F  + +      + PN+ TY  ++   C   D + 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L   +  + V P+ ++ + +M  L K  ++D+A  LLD M +  V+P+   YN L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236

Query: 271 GFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           G    G+  +V  ++  + +  G + +  +YN++++G CK    +E   ++  +    ++
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTY 387
           P V+TY  L HGL      + A +++ E+    +  D   Y + + G C   R Q  + +
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 388 ARRKGNSGNTN 398
               G +G  N
Sbjct: 357 WDSAGFAGLRN 367



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 43/91 (47%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+     PP + ++N L+  L +  + D   +L+  +   GL PD+ +Y+  I   C   
Sbjct: 605 MKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCD 664

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           ++  G  +   +L     P V+T+  L++ +
Sbjct: 665 RIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 198/403 (49%), Gaps = 41/403 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+  L      D   +LF  +   G  P+++TY++LI+  C+ G++     +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    P+V+T+ +LI G C + R+V A  L T ++   C+PNV T+N L+ GLCR
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L K M + NG       P+ V+Y+++IDGLC+EG ++ A +L   M   ++
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +T+T++I+ FC     + A   L  M+ +G+  + V+   +++ +CK GK  +A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532

Query: 249 LLDLMVQ--------------------CDVR---------------PNAFTYNTLMDGFC 273
           +L+ +V+                    C V+               P+  TY TL+DG  
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G I     +   M+  GC  + + Y I+ING C+   VEEA  L + +   G+ P  V
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           TY  +  G     + +RAL+    M       +   Y + + G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 7/352 (1%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           ++R+ + G    +  Y  ++N  CK G      +   +IL+  F  +    TSL+ G C 
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 94  ESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              + +A  +F  + K   C PN ++Y+ LI+GLC  G    A  L  +M    GE G  
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM----GEKGC- 297

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+T TY+++I  LC  G +DKA  LF +M      PNV TYT LI G C      EA 
Sbjct: 298 -QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           G+  +MV   + P+V++ N ++N  CK+G++  A  LL +M +   +PN  T+N LM+G 
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK  +   L   M   G   D  SYN+LI+G C+   +  A  L + +    I+P  
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +T+  + +   +  +A+ A      M    ++ D  T  T IDG+C   + R
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 181/373 (48%), Gaps = 12/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S++IL+  L +    +    L  ++   G  P   TY++LI   C  G +   F +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNV T+T LI GLC + +I EA  +  K+      P+VITYN LING C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M           KPN  T++ +++GLC+ G   KA  L  +M    L
Sbjct: 384 DGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++V+Y  LI G C     N A  LL  M    ++P+ ++   I+N  CK GK D AS 
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR---VKELFVSMESMGCKHDDFSYNILIN 305
            L LM++  +  +  T  TL+DG C  GK      + E  V M  +   H   S N++++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH---SLNVILD 554

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
              K  +V+E L++  ++   G+ P+VVTY TL  GL        + ++   M+ +    
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614

Query: 366 DTCTYRTFIDGLC 378
           +   Y   I+GLC
Sbjct: 615 NVYPYTIIINGLC 627



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 7/340 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  ++  L KN + +       ++  IG   D +  + L+  FC+   +     +F  + 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 74  RSCF-APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +    APN V+++ LI GLC   R+ EA  L  ++   GC+P+  TY  LI  LC  G  
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A NLF EM      I    KPN  TY+++IDGLC++G +++A  +  +M  + + P+V
Sbjct: 318 DKAFNLFDEM------IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           +TY +LI+G+C       A  LL  M  +  +PNV + N +M  LC+ GK   A  LL  
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   + P+  +YN L+DG C  G +N   +L  SM     + D  ++  +IN +CK  +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
            + A +    +  KGI    VT  TL  G+ ++ +   AL
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 5/330 (1%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
           YS L+    K+    L +V + R+    F   ++ + +++  LC       A    +K+ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
             G   +     +L+ G CR  +   AL +F  M+       V   PN+V+YSI+I GLC
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE-----VTCAPNSVSYSILIHGLC 277

Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
           + G +++A  L  QM  +   P+  TYT LI   C     ++A  L  EM+ +G +PNV 
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337

Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
           +  V+++ LC++GK++ A+ +   MV+  + P+  TYN L++G+C  G++    EL   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
           E   CK +  ++N L+ G C+  +  +A+ L   +   G+ P +V+YN L  GL      
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             A KL   M   D+  D  T+   I+  C
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 7/312 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F  N   ++SL+  L        A   + +++A G    +I Y T++N LC+ G+T  A 
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTY 195
               ++     +IG V   +  T  ++  G C+   +  A ++F  M  E    PN V+Y
Sbjct: 216 MFMSKIL----KIGFVLDSHIGTSLLL--GFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           + LIHG C      EA GL  +M ++G QP+  +  V++  LC  G +D A  L D M+ 
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
              +PN  TY  L+DG C  GKI     +   M          +YN LINGYCK+  V  
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
           A  L   +  +  KP V T+N L  GL  + +  +A+ L   M  N ++ D  +Y   ID
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449

Query: 376 GLCVRPQVRFTY 387
           GLC    +   Y
Sbjct: 450 GLCREGHMNTAY 461



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 64/363 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +L+  L ++   +    + +++    +FP + TY+ LIN +CK G+V   F +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    PNV TF  L++GLC   +  +A  L  ++   G  P++++YN LI+GLCR
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453

Query: 129 TGHTIVALNLFKEM--------------------TNGNGEIGVVF---------KPNTVT 159
            GH   A  L   M                      G  ++   F           + VT
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513

Query: 160 YSIIIDGLCKEGFVDKA---------------------------------KELFLQMKYE 186
            + +IDG+CK G    A                                 +EL +  K  
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573

Query: 187 NLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            L   P+VVTYT+L+ G   + D   +  +L  M   G  PNV    +I+N LC+ G+++
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +LL  M    V PN  TY  ++ G+   GK++R  E   +M   G + +D  Y+ L+
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693

Query: 305 NGY 307
            G+
Sbjct: 694 QGF 696



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 58/421 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+L+  L +  H +T   L   +N   + PD  T++ +IN FCK G+  +    
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +LR   + + VT T+LI G+C   +  +A  +   L          + N +++ L +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  L +  ++     ++G+V  P+ VTY+ ++DGL + G +  +  +   MK    
Sbjct: 559 GCKVKEELAMLGKIN----KLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV  YT +I+G C      EA+ LL  M D GV PN V+  V++     NGK+D A  
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK-INRVKELFVS------------------ME 289
            +  MV+     N   Y++L+ GF L+ K I+  +E  VS                  +E
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732

Query: 290 SMG--------------CKH------DDFSYNILING-------------YCKNKEVEEA 316
            +G              CK       +D   N+L  G             YC  K+  + 
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKC 792

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + L   +   G  P+  ++  +  GL +   AERA +L +E+  ++   +     T+++ 
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852

Query: 377 L 377
           L
Sbjct: 853 L 853


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 189/370 (51%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P ++++N++L  L K   +  V  +++R+ +  L PD+ TY ILI+  C+ G V     +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  I+++    +   + SL+KG C   R+ EA   F     F    N+ TYN +I GL  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFD 380

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           +G    A+ L+  +     E  V   P+TVT+  +I GLC+ GF +KA  +F + +    
Sbjct: 381 SGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             +V +Y+S+I+G C+     +A  +  +M   G +PN    N +++  C+  +  +A R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M      P   TYNTL+DG C   K      +   M   G   D  +Y  LI G  
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
            +K++++ALS++ ++ +KG+K  V+ +N L HGL    + + AL +F +M +  +   + 
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 368 CTYRTFIDGL 377
            TY T +DGL
Sbjct: 616 VTYNTLMDGL 625



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 178/336 (52%), Gaps = 8/336 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLN-SIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           + ++NI++  L  +   D  + L+  L   +   PD  T+  LI+  C+ G  +  F IF
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
                S    +V +++S+I GLC   R+V+A  ++ K+   GC+PN   YN LI+G C+ 
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
             T  A+ ++ +M + NG       P  +TY+ +IDGLCK     +A  +  +M      
Sbjct: 488 YRTSDAVRIYSKMAD-NG-----CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P++ TY SLI G       ++A  +  +++ +G++ +V+  N++++ LC  GK+D A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 250 L-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             D+  + +  PN  TYNTLMDG   TG I++   L+ S+   G + D  SYN  I G C
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
               + E + L +E+  +GI PTV+T+N L   + +
Sbjct: 662 SCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 48/411 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-----PDLYTYSILINCFCKMGQVS 63
           P + S N LL    + + +    + F  L S G F     P+L TY+I++   C  G + 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               +F  + R   AP+ +T+++L+ GL  + R+  A  L  ++   G +P+V+ YN L+
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G  + G     + ++ ++    G      +PN  TY++++DGLCK G   +  E++ +M
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGA-----RPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG--------------------V 223
              NL P+V+TY  LIHG C + D + A  +  E++  G                    V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 224 QP--------------NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR--PNAFTYNT 267
           Q               N+ + N+++  L  +G +D A  L DL+ + DV   P+  T+ T
Sbjct: 351 QEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL-EKDVACIPDTVTFGT 409

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G C  G  N+   +F      G + D FSY+ +ING C    + +A+ +Y ++   G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            KP    YN L  G  ++ +   A++++ +M  N  +    TY T IDGLC
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 188/372 (50%), Gaps = 9/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V  +N LLG   K   ++ V+ ++ +L    G  P+L TY+++++  CK G+      
Sbjct: 226 PDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGE 285

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R++ +   P+V+T+  LI GLC    +  AA +++++   G   +   YN+L+ G C
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC 345

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYE 186
           + G    A   +          G     N  TY+I+I GL   G VD+A EL+ L  K  
Sbjct: 346 QAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              P+ VT+ +LIHG C     N+A  +  E    G Q +V S + ++N LC  G++ +A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            ++ + M +   +PN+  YN L+ GFC   + +    ++  M   GC     +YN LI+G
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK ++ +EA S+  E+   G  P + TY +L  GLF  ++ + AL ++ ++    +  D
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578

Query: 367 TCTYRTFIDGLC 378
              +   I GLC
Sbjct: 579 VMMHNILIHGLC 590



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 8/292 (2%)

Query: 91  LCAESRIVEAAALFTKLKAF----GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           L A SR +   A     +A     GC P + ++N L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
              G    PN  TY+I++  LC  G +D+A  LF  ++   + P+ +TY++L+ G    +
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ-CDVRPNAFTY 265
             + A  LL EM   GVQP+VV  N ++    K G+ +   R+ D +V+    RPN  TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
           N ++DG C  G+   V E++  M +   + D  +Y ILI+G C++ +V+ A  +Y+E+  
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            G+      YN+L  G  +  + + A K F +  G     +  TY   I GL
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGL 378



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 42/307 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  L +N   +   ++F+     G   D+++YS +IN  C +G++     +
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           + ++ +    PN   + +LI G C   R  +A  +++K+   GC P VITYNTLI+GLC+
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY---------------------------- 160
                 A ++ +EM   NG     F P+  TY                            
Sbjct: 522 AEKYQEASSVAREMVE-NG-----FTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 161 -------SIIIDGLCKEGFVDKAKELFLQMK-YENLNPNVVTYTSLIHGFCHANDWNEAK 212
                  +I+I GLC  G VD+A  +F  MK  +N  PN+VTY +L+ G       ++A 
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L   + + G++P+++S N  +  LC   ++    +LLD ++   + P   T+N L+   
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695

Query: 273 CLTGKIN 279
              G I 
Sbjct: 696 IKYGPIQ 702



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 7/251 (2%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKY----ENLNPNVVTYTSLIHGFCHANDWNE 210
           P   +++ ++D   +      A   F  + +      + PN+ TY  ++   C   D + 
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  L   +  + V P+ ++ + +M  L K  ++D+A  LLD M +  V+P+   YN L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236

Query: 271 GFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           G    G+  +V  ++  + +  G + +  +YN++++G CK    +E   ++  +    ++
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTY 387
           P V+TY  L HGL      + A +++ E+    +  D   Y + + G C   R Q  + +
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 388 ARRKGNSGNTN 398
               G +G  N
Sbjct: 357 WDSAGFAGLRN 367



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 43/91 (47%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M+     PP + ++N L+  L +  + D   +L+  +   GL PD+ +Y+  I   C   
Sbjct: 605 MKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCD 664

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           ++  G  +   +L     P V+T+  L++ +
Sbjct: 665 RIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 201/404 (49%), Gaps = 41/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + NI++  L K +  D   S+F  L+     PD  T+  LI+   + G+V+  +++
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYML 503

Query: 69  FGRILRSCFAPNVVTFTSLIKGL--------------------CA--------------- 93
           + ++L S   PN V +TSLI+                      C+               
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
              I +  ALF ++KA G  P+V +Y+ LI+GL + G +     LF EM     E G+  
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK----EQGLHL 619

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             +T  Y+I+IDG CK G V+KA +L  +MK + L P VVTY S+I G    +  +EA  
Sbjct: 620 --DTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYM 677

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  E   + V  NVV  + +++   K G++D A  +L+ ++Q  + PN +T+N L+D   
Sbjct: 678 LFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALV 737

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              +I+     F +M+++ C  ++ +Y+I++NG CK ++  +A   + E+  +G+KP  +
Sbjct: 738 KAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTI 797

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           TY T+  GL  +     A  LF   + +    D+  Y   I+GL
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGL 841



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 189/375 (50%), Gaps = 12/375 (3%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           + P ++S+NIL+  L K    +  L +   +   GLFP++ T +I+I+  CK  ++    
Sbjct: 407 AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            IF  +      P+ VTF SLI GL    ++ +A  L+ K+   G  PN + Y +LI   
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            + G       ++KEM +          P+ +  +  +D + K G ++K + LF ++K +
Sbjct: 527 FKCGRKEDGHKIYKEMMHRG------CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+V +Y+ LIHG        +   L  EM +QG+  +  + N++++  CK+GK++ A
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS---YNIL 303
            +LL+ M    ++P   TY +++DG     KI+R+ E ++  E    K  D +   Y+ L
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGL---AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSL 697

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+ K   ++EA  +  EL  KG+ P   T+N L   L +  + + AL  F  M+    
Sbjct: 698 IDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKC 757

Query: 364 AADTCTYRTFIDGLC 378
             +  TY   ++GLC
Sbjct: 758 PPNEVTYSIMVNGLC 772



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 187/412 (45%), Gaps = 42/412 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  F  L+   A+    D  LSL   + S     DL  Y++ I+CF K+G+V + +  F 
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL----------------------- 107
            +      P+ VTFTS+I  LC   R+ EA  LF +L                       
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356

Query: 108 ------------KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
                       K  GC P+VI YN ++  L R G    AL + + M            P
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-------P 409

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N  +Y+I+ID LCK G ++ A ++   MK   L PN++T   +I   C A   +EA  + 
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + +  +   P+ V+   +++ L ++GK+++A  L + M+     PNA  Y +L+  F   
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+     +++  M   GC  D    N  ++   K  E+E+  +L+ E+  +G+ P V +Y
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           + L HGL +   ++   KLF EM+   +  DT  Y   IDG C   +V   Y
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 7/370 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P V ++N ++        ++   SL +R    G  P +  Y+ ++ C  + G+V    
Sbjct: 338 SVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            I    ++   APN+ ++  LI  LC    +  A  +   +K  G  PN+IT N +I+ L
Sbjct: 398 RIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRL 456

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+      A ++F  + +       V  P++VT+  +IDGL + G V+ A  L+ +M   
Sbjct: 457 CKAQRLDEACSIFLGLDHK------VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDS 510

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
              PN V YTSLI  F       +   +  EM+ +G  P+++  N  M+ + K G+++  
Sbjct: 511 GQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKG 570

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L + +    + P+  +Y+ L+ G    G      +LF  M+  G   D  +YNI+I+G
Sbjct: 571 RALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           +CK+ +V +A  L  E+  KG++PTVVTY ++  GL +I + + A  LF E +   V  +
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLN 690

Query: 367 TCTYRTFIDG 376
              Y + IDG
Sbjct: 691 VVVYSSLIDG 700



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 12/348 (3%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           ++K +   G  PDL   +  ++C  K G++  G  +F  I      P+V +++ LI GL 
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGV 151
                 +   LF ++K  G   +   YN +I+G C++G    A  L +EM T G      
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG------ 651

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             +P  VTY  +IDGL K   +D+A  LF + K + ++ NVV Y+SLI GF      +EA
Sbjct: 652 -LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEA 710

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L E++ +G+ PN  + N +++ L K  ++D A      M      PN  TY+ +++G
Sbjct: 711 YLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNG 770

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C   K N+    +  M+  G K +  +Y  +I+G  +   V EA  L+      G  P 
Sbjct: 771 LCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPD 830

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTCTYRTFIDGL 377
              YN +  GL    +A  A  LF E  ++G  + + TC     +D L
Sbjct: 831 SACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCV--VLLDAL 876



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 158/343 (46%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N  + C+ K    +   +LF+ + + GL PD+ +YSILI+   K G     + +
Sbjct: 549 PDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKL 608

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       +   +  +I G C   ++ +A  L  ++K  G +P V+TY ++I+GL +
Sbjct: 609 FYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF+E  +   ++      N V YS +IDG  K G +D+A  +  ++  + L
Sbjct: 669 IDRLDEAYMLFEEAKSKAVDL------NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  T+  L+     A + +EA      M +    PN V+ ++++N LCK  K + A  
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  ++PN  TY T++ G    G +   K+LF   +S G   D   YN +I G  
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLS 842

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
              +  +A  L+ E   KG +    T   L   L +    E+A
Sbjct: 843 NANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 42/366 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S++  L+G L+     D +L+L +++  IG                           
Sbjct: 200 PAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG--------------------------- 232

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                   +   V  FT+LI     E R+  A +L  ++K+     +++ YN  I+   +
Sbjct: 233 --------YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGK 284

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G   +A   F E+ +     G+V  P+ VT++ +I  LCK   VD+A ELF ++     
Sbjct: 285 VGKVDMAWKFFHELKSQ----GLV--PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKS 338

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P V  Y ++I G+     +NEA  LL     +G  P+V++ N I+  L + GK++ A R
Sbjct: 339 VPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALR 398

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M + D  PN  +YN L+D  C  G++    ++  SM+  G   +  + NI+I+  C
Sbjct: 399 ILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLC 457

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K + ++EA S++  L  K   P  VT+ +L  GL    +   A  L+ +M  +    +  
Sbjct: 458 KAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAV 517

Query: 369 TYRTFI 374
            Y + I
Sbjct: 518 VYTSLI 523



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 6/239 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  LAK    D    LF+   S  +  ++  YS LI+ F K+G++   ++I
Sbjct: 654 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN  T+  L+  L     I EA   F  +K   C PN +TY+ ++NGLC+
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCK 773

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   ++EM           KPNT+TY+ +I GL + G V +AK+LF + K    
Sbjct: 774 VRKFNKAFVFWQEMQKQG------LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGG 827

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+   Y ++I G  +AN   +A  L  E   +G +    +  V+++ L K   ++ A+
Sbjct: 828 IPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAA 886



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 6/238 (2%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
            YN L+  + RT +      + +EM+         F P+  T   ++    K   + +A 
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAG------FGPSNNTCIEMVASFVKSRKLREAF 187

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            +   M+     P    YT+LI     A++ +    LL +M + G +  V     ++   
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVF 247

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            + G++D A  LLD M       +   YN  +D F   GK++   + F  ++S G   DD
Sbjct: 248 AREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
            ++  +I   CK + V+EA+ L+ EL      P V  YNT+  G   + +   A  L 
Sbjct: 308 VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 21/263 (7%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTV---------------------TYSIIIDGLCKEGFV 173
           ALN F EM      +GV+ +   V                      Y+ ++  + +   +
Sbjct: 89  ALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNL 148

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           +  +++  +M      P+  T   ++  F  +    EA G++  M     +P   +   +
Sbjct: 149 EYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTL 208

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  L    + D    LL  M +         + TL+  F   G+++    L   M+S   
Sbjct: 209 IGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSF 268

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D   YN+ I+ + K  +V+ A   ++EL  +G+ P  VT+ ++   L +  + + A++
Sbjct: 269 NADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVE 328

Query: 354 LFVEMQGNDVAADTCTYRTFIDG 376
           LF E+  N        Y T I G
Sbjct: 329 LFEELDSNKSVPCVYAYNTMIMG 351



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 59/119 (49%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +++I++  L K + ++     ++ +   GL P+  TY+ +I+   ++G V     
Sbjct: 758 PPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKD 817

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
           +F R   S   P+   + ++I+GL   ++ ++A  LF + +  GC     T   L++ L
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 182/397 (45%), Gaps = 29/397 (7%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++N L+G L +    +      K +   GL PD +TY  +IN  CK G+      +  
Sbjct: 278 VVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD 337

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +  +   PNVV +++LI G   +    EA  +  ++ A G +PN ITY+ LI GLC+ G
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397

Query: 131 HTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVTYS 161
               A  + K+MT                      N E   +           PN  TYS
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           III+GLC+ G  ++A  L  QM  + L PN   Y  LI G+C    ++ A   L +M  +
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE 517

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            + P++   N ++  L   GKMD A    D M++   +PN FTY  L+ G+ + G + + 
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           ++L   M + G   +DF Y  ++ GY K+  +E+  S    +  KG+ P    Y  + H 
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L      + A+ +   ++ N +  D+  Y + I G C
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 175/375 (46%), Gaps = 41/375 (10%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +   G+ PD+YTYS LI  +CK+  +     +   +  +  + NVVT+ +LI GLC    
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           I EA     +++ +G  P+  TY  +INGLC+ G    A  L  EM+           PN
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG------LMPN 347

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC------------- 203
            V YS +IDG  ++G  D+A ++  +M    + PN +TY +LI G C             
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 204 --------------------HANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNG 241
                               H    N+ +  L+  EM   G+ PNV + ++I+N LC+ G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + + AS LL+ M+   ++PNAF Y  L+ G+C  G  +   E    M       D + YN
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
            LI G     +++EA+  Y+E+  KG +P   TY  L HG       E+A +L  +M  +
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 362 DVAADTCTYRTFIDG 376
            +  +   Y   ++G
Sbjct: 588 GLNPNDFIYAQILEG 602



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 41/411 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  ++ L+    +  + D    + K +++ G+ P+  TY  LI   CK+G++     I
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ +  +  + +T+  +I+G   +    EA  L  +++  G  PNV TY+ +INGLC+
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQ 465

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G +  A  L ++M      I    KPN   Y+ +I G C+EG    A E   +M  ENL
Sbjct: 466 IGESERASGLLEQM------IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENL 519

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++  Y SLI G  +    +EA     EM+++G QPN  +   +++     G ++ A +
Sbjct: 520 TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQ 579

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-------------------- 288
           LL  M+   + PN F Y  +++G+  +  + +V     SM                    
Sbjct: 580 LLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLS 639

Query: 289 ---------------ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
                          E  G   D   Y  LI+G+CK  ++E+A+ L +E+  KGI+P + 
Sbjct: 640 SSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            YN L  G  +      A  +F  +    +  +  TY T IDG C    +R
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N+++    +  + +    L   +   G+ P++YTYSI+IN  C++G+      +  ++
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           +     PN   +  LI G C E     A     K+      P++  YN+LI GL   G  
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A+  + EM          F+PN  TY  +I G    G ++KA++L  QM    LNPN 
Sbjct: 540 DEAIEYYDEMLEKG------FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  ++ G+  +++  +    L  M+++G+ P+     ++++ L  +G M  A  +L +
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           + +  + P++  Y +L+ GFC    + +   L   M   G +     YN LI+G+CK+ +
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A +++N +  KG+ P  VTY TL  G  +      A+ L+ EM    VA D   Y  
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSV 773

Query: 373 FIDG 376
              G
Sbjct: 774 LAAG 777



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 197/428 (46%), Gaps = 58/428 (13%)

Query: 1   MRHMHPSPPPV-SSFNILLGCLAKNKH---YDTVLSLFKR-------------LNSIGLF 43
           M   +P+PP V SS +  L    + +     D ++  +K+             +  +GL 
Sbjct: 146 MIRAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLA 205

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P L   + L+    +   + L + + G +  +  +P+V T+++LI+  C    +  A  +
Sbjct: 206 PSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKV 265

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +++  GC  NV+TYNTLI GLCR G    A    KEM     + G+V  P+  TY  I
Sbjct: 266 VEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME----DYGLV--PDGFTYGAI 319

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           I+GLCK G  D+AK L  +M    L PNVV Y++LI GF    + +EA  ++ EM   GV
Sbjct: 320 INGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGV 379

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC--------------------------- 256
           QPN ++ + ++  LCK G+M  ASR+L  M +                            
Sbjct: 380 QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFL 439

Query: 257 --------DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                    + PN +TY+ +++G C  G+  R   L   M + G K + F Y  LI+GYC
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +      A     ++  + + P +  YN+L  GL  + + + A++ + EM       +  
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559

Query: 369 TYRTFIDG 376
           TY   I G
Sbjct: 560 TYGGLIHG 567



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 30/398 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +++I++  L +    +    L +++ + GL P+ + Y+ LI+ +C+ G  SL    
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACET 510

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ R    P++  + SLI GL    ++ EA   + ++   G +PN  TY  LI+G   
Sbjct: 511 LKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570

Query: 129 TGHTIVALNLFKEMTNGN---------------------GEIGVVFK--------PNTVT 159
            G+   A  L  +M N                        ++    K        P+   
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y I+I  L   G +  A  +   ++   L P+ + Y SLI GFC A D  +A GLL EM 
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P +   N +++  CK+  + +A  + + ++   + PN  TY TL+DG+C  G I 
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              +L+  M + G   D F Y++L  G   + ++++AL +  E+  +G    + ++NTL 
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLV 809

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           HG  +  + +  +K    M   D+     T    + GL
Sbjct: 810 HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGL 847



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 163/328 (49%), Gaps = 6/328 (1%)

Query: 51  ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
           +L++ + K G+V  G  +   +     AP++     L+K L     +     +   ++  
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  P+V TY+TLI   C+      A  + +EM     E G     N VTY+ +I GLC+ 
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR----ETGCSL--NVVTYNTLIGGLCRA 291

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++A     +M+   L P+  TY ++I+G C     ++AK LL EM   G+ PNVV  
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           + +++   + G  D A +++  M    V+PN  TY+ L+ G C  G++ R   +   M  
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           +G   D  +YN++I G+ +    EEA  L NE+   GI P V TY+ + +GL +I ++ER
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           A  L  +M  + +  +   Y   I G C
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYC 499



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 28/325 (8%)

Query: 23  KNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVV 82
           K+ + + V S  K +   GL PD   Y I+I+     G +     +   I ++   P+ +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664

Query: 83  TFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
            + SLI G C  + + +A  L  ++   G EP +  YN LI+G C++     A N+F   
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF--- 721

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
              N  I     PN VTY+ +IDG CK G +  A +L+ +M  E + P+   Y+ L  G 
Sbjct: 722 ---NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSS-NVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            ++ D  +A  +  EM+ +G    ++SS N +++  CK GK+    + L +M+  D+ P+
Sbjct: 779 SNSGDLQQALFITEEMIARGYA--IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPS 836

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY-------------------NI 302
             T   ++ G    GK++    +FV ++     H D  +                   + 
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN 896

Query: 303 LINGYCKNKEVEEALSLYNELPFKG 327
           +I  +CK   +++AL L++ L  KG
Sbjct: 897 MIQSHCKQGYLDKALMLHDALVAKG 921



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMV--------------------DQGVQPNVVS 229
           P    +  L    C A  + +A GLL +M+                    DQG +P V+ 
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVL- 176

Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
            +V+++   K G++ + + ++ LM    + P+    N L+        ++ + ++   ME
Sbjct: 177 -DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFME 235

Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
             G   D ++Y+ LI  YCK +++E A  +  E+   G    VVTYNTL  GL      E
Sbjct: 236 GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIE 295

Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            A     EM+   +  D  TY   I+GLC R
Sbjct: 296 EAFGYKKEMEDYGLVPDGFTYGAIINGLCKR 326



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  L+    K       + L+  + + G+ PD + YS+L       G +     
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALF 789

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           I   ++   +A  + +F +L+ G C   ++ E       +      P+++T   ++ GL 
Sbjct: 790 ITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLG 848

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL-------------CKEGFVD 174
             G    A  +F E+   N         +++   +I  GL             CK+G++D
Sbjct: 849 EAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLD 908

Query: 175 KA 176
           KA
Sbjct: 909 KA 910


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 36/405 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG--- 65
           P V ++N+L+  L +N   D    +   ++  G  PD  ++  +++  CK+G+V      
Sbjct: 102 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 161

Query: 66  ---------------------------FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
                                      F +   +++    PNVVT+T+++   C    + 
Sbjct: 162 LAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 221

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A A+  ++ + GC PNV+T+  L+ G    G    AL+++  M +        + P+T+
Sbjct: 222 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG------WAPSTI 275

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           +Y+++I GLC  G +  A + F  MK   L PN  TY++L+ GF +A D + A  +  EM
Sbjct: 276 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 335

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
              G +PNVV    +++ LCK    D A  L+D M+  +  PN  T+NTL+   C  G++
Sbjct: 336 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 395

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            R   +F  M   GC  +D +YN L++G  +    ++A ++  E+   G + ++VTYNT+
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 455

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            + L ++   + A+ L   M    +  D  T+   I   C   +V
Sbjct: 456 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 500



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S+N ++  L        V S+   +   GL P++ TY+ +++ FCK  ++ +   I
Sbjct: 167 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 226

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R++     PNV+TFT+L+KG   + ++ +A +++  +   G  P+ I+YN LI GLC 
Sbjct: 227 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 286

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+ F  M            PN  TYS ++DG    G +D A  ++ +MK    
Sbjct: 287 IGDLKGALDFFNSMKRN------ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 340

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV YT++I   C    +++A+ L+ +M+     PN V+ N ++  LC  G++  A  
Sbjct: 341 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 400

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M +    PN  TYN L+ G    G       + + M + G +    +YN +IN  C
Sbjct: 401 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 460

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    + A+ L   +  +GI+P   T+N + H   +  +   A  L  +M   +   +  
Sbjct: 461 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 520

Query: 369 TYRTFIDGLC 378
            Y   I  LC
Sbjct: 521 AYTILISELC 530



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 12/362 (3%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           +G  A+    D  L  F R + +G   P +  Y+ L++   +   V     ++  + ++ 
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
             PNV T+  LI+ LC   R+  A  +  ++   GC P+ +++ T+++G+C+ G    A 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
               E             P   +Y+ ++  LC E  + +   +  +M    L PNVVTYT
Sbjct: 160 GFLAETV-----------PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
           +++  FC A +   A  +L  MV  G  PNV++   ++    ++GK+ +A  +   MV  
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              P+  +YN L+ G C  G +    + F SM+      +  +Y+ L++G+    +++ A
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           + ++NE+   G KP VV Y  +   L +    ++A  L  +M  ++   +T T+ T I  
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388

Query: 377 LC 378
           LC
Sbjct: 389 LC 390



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 41/335 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S+N+L+  L         L  F  +    L P+  TYS L++ F   G +    +I
Sbjct: 272 PSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 331

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +  S   PNVV +T++I  LC +    +A +L  K+    C PN +T+NTLI  LC 
Sbjct: 332 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCD 391

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    ALN+F  M   NG       PN  TY+ ++ GL +EG    A  + ++M     
Sbjct: 392 CGRVGRALNVFHGMRR-NG-----CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 445

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++VTY ++I+  C       A  LL  M+ QG+QP+  + N I++  CK GK+  A+ 
Sbjct: 446 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA- 504

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
                                   CL G++N V           C  +  +Y ILI+  C
Sbjct: 505 ------------------------CLLGQMNAVN----------CPRNVVAYTILISELC 530

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
              ++  A+    ++ ++GI P   T+N L   +F
Sbjct: 531 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 6/199 (3%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           M   PP   +FN L+G L         L++F  +   G  P+  TY+ L++   + G   
Sbjct: 372 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F +   +L + F  ++VT+ ++I  LC       A  L  ++   G +P+  T+N +I
Sbjct: 432 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 491

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           +  C+ G   +A  L  +M        V    N V Y+I+I  LC +G +  A    L+M
Sbjct: 492 HAYCKEGKVSIAACLLGQMN------AVNCPRNVVAYTILISELCNQGKLSNAMVYLLKM 545

Query: 184 KYENLNPNVVTYTSLIHGF 202
            YE + PN  T+  L+   
Sbjct: 546 LYEGICPNEATWNVLVRAI 564



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 66/128 (51%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N ++ CL +       + L  R+   G+ PD +T++ +I+ +CK G+VS+   + G++
Sbjct: 451 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                  NVV +T LI  LC + ++  A     K+   G  PN  T+N L+  +     T
Sbjct: 511 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGT 570

Query: 133 IVALNLFK 140
           I  ++LFK
Sbjct: 571 IGPIHLFK 578


>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
 gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
          Length = 580

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 21/336 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  + ++N ++ C++K    +    + K +      PD + Y+ +IN FCK+G      V
Sbjct: 205 PADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVV 264

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY-------- 119
           + GR+  + +AP+ V F  +I GLC  S+  EA  +       GCEP+ +TY        
Sbjct: 265 LLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERK 324

Query: 120 --------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF-----KPNTVTYSIIIDG 166
                   + L+  LC+TG    A  L +++TNG+ E   +      KP+ V YSI+ID 
Sbjct: 325 CPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDA 384

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC  G  D+   +   M+   + P+ V YT  ++ FC +   ++A  LL  MV+ G  P+
Sbjct: 385 LCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPD 444

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           V+S N ++  LC  G+ + A RL  +MV+  + PN FTY  L+   C T K+   + LF 
Sbjct: 445 VISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFN 504

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            M+   C  D  +Y  LI G+ +N+ V EA  L  +
Sbjct: 505 FMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQ 540



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 177/408 (43%), Gaps = 38/408 (9%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +RH      P   +N++ G LAK + +  V  + + L +        T   L+  FCK  
Sbjct: 92  LRH-QGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKAL 150

Query: 61  QVSLGFVIFGRILRS---CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
            V    V F + + S     A +   +  LI+GLC   RI EA  L+  ++      ++ 
Sbjct: 151 AVDKA-VRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIF 209

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYN +I  + + G    A  + K M   +       KP+   Y+ +I+G CK G    A 
Sbjct: 210 TYNNMIECISKLGMVEQAEKVLKTMEESD------CKPDKFIYTRVINGFCKLGNFKNAV 263

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV--------- 228
            L  +MK     P+ V +  +I G C  + ++EA  +L   ++ G +P+ V         
Sbjct: 264 VLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQER 323

Query: 229 ---SSNVI----MNELCKNGKMDNASRLLD-----------LMVQCDVRPNAFTYNTLMD 270
              ++N++    M  LCK GK++ A +LL+           L+     +P+   Y+ ++D
Sbjct: 324 KCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVID 383

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
             C  G  +    +  +ME  G K D   Y I +  +C++  +++A  L   +   G  P
Sbjct: 384 ALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYP 443

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V++YNTL   L    Q E A +LF  M    +  +  TY   I  LC
Sbjct: 444 DVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALC 491



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 34/374 (9%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
            +N L+  L K    D  L L++ +    +  D++TY+ +I C  K+G V     +   +
Sbjct: 175 EYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTM 234

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S   P+   +T +I G C       A  L  ++K  G  P+ + ++ +I GLC+T   
Sbjct: 235 EESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKF 294

Query: 133 IVALNLFKEMTNGNGEIGVV--FK-------PNT-VTYSIIIDGLCKEGFVDKAKELFLQ 182
             AL + K       E   V  FK       P T + YS ++  LCK G V+ A +L   
Sbjct: 295 DEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLL-- 352

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
              E+L         L+ G                    G +P+VV  +++++ LC  G 
Sbjct: 353 ---EDLTNGSRESEQLLGG-------------------DGCKPDVVMYSIVIDALCAMGM 390

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
            D    ++  M +  V+P+A  Y   +  FC + +++    L   M   GC  D  SYN 
Sbjct: 391 TDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNT 450

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           L+   C   + EEA  L+  +   GI+P V TY  L   L   ++ E A  LF  M+ + 
Sbjct: 451 LLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSK 510

Query: 363 VAADTCTYRTFIDG 376
              D  TY+  I G
Sbjct: 511 CVPDMETYKALILG 524



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 171/405 (42%), Gaps = 36/405 (8%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S  P ++ ++++ C A     D   ++F  L   G     + Y+++     K+ +    F
Sbjct: 63  SLEPEAALDLVV-CYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVF 121

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT--YNTLIN 124
            +   ++   F  +  T  +L++  C    + +A      + + G +  + T  YN LI 
Sbjct: 122 RMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIE 181

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      AL L+ E+  GN     +F     TY+ +I+ + K G V++A+++   M+
Sbjct: 182 GLCKGDRIDEALRLY-ELMRGNNVPADIF-----TYNNMIECISKLGMVEQAEKVLKTME 235

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
             +  P+   YT +I+GFC   ++  A  LL  M + G  P+ V  + I+  LCK  K D
Sbjct: 236 ESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFD 295

Query: 245 NASRLLDLMVQCDVRPNAFT----------------YNTLMDGFCLTGKINRVKELFV-- 286
            A  +L + ++    P+  T                Y+ LM   C TGK+    +L    
Sbjct: 296 EALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDL 355

Query: 287 ---SMESM------GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
              S ES       GCK D   Y+I+I+  C     +E   +   +  +G+KP  V Y  
Sbjct: 356 TNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTI 415

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
             +      + + A +L   M       D  +Y T +  LC   Q
Sbjct: 416 FLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQ 460



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 19/253 (7%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNS-----------IGLFPDLYTYSILINCFCKMGQV 62
           ++ L+ CL K    +    L + L +            G  PD+  YSI+I+  C MG  
Sbjct: 332 YSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMT 391

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
             GFV+   +      P+ V +T  +   C  +R+ +A  L   +   GC P+VI+YNTL
Sbjct: 392 DEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTL 451

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           +  LC  G    A  LF+ M     E G+  +PN  TY+ +I  LC    ++ A+ LF  
Sbjct: 452 LFALCSAGQEEEACRLFQVMV----ETGI--EPNVFTYTQLIRALCSTKKLEGARHLFNF 505

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK     P++ TY +LI G        EA+ LL +  D   + N   S  +++EL + G 
Sbjct: 506 MKLSKCVPDMETYKALILGHYQNEGVREARQLLEQESDAFSRRNPGKS--LLSELHEAGN 563

Query: 243 MDNASRLLDLMVQ 255
                +L  ++ Q
Sbjct: 564 FYERKQLTAIIDQ 576



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           + ++  YN ++       +++ +  +   M   GC  +  +   L+  Y     V+ A +
Sbjct: 28  KHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQA 87

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG-----NDVAADTCTYRTF 373
           ++NEL  +G +     YN +F  L ++++ +   ++  ++       +D  AD    R F
Sbjct: 88  IFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALV-RIF 146

Query: 374 IDGLCVRPQVRF 385
              L V   VRF
Sbjct: 147 CKALAVDKAVRF 158


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 186/403 (46%), Gaps = 36/403 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V +FN +L  LA+ +    +  ++  +     + PD+ TY IL+N  CK G+V     + 
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 70  GRILRSCF--APNVVTFTSLIKGLCAESRIVEAAALFTKLKA--FGCEPNVITYNTLING 125
             + R      P+VVT  +++ GLC   R+ EA A   +  +   GC PN +TYN LI+ 
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255

Query: 126 LCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-------------K 154
            CR G+  +A  L ++M N                    G  G                K
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VTYS ++  L     V  A ELF +   E  +P+ + Y ++I G   A    +A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G + +  + N+++   C+  ++  A  LL  M +  +RP+  TYNTL+ G C 
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G    V EL   M   GC+    ++  L++GYCK  +++EAL +   +   GI P  V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YNTL   L +    + A++LF EM+   V A+  T+   + GL
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 187/376 (49%), Gaps = 12/376 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSI-GLFPDLYTYSILINCFCKMGQVSLGF 66
           P V + N ++  L K+      L+   +R++S+ G  P+  TY+ LI+ FC++G +S+ +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--NVITYNTLIN 124
            +  ++       N+VT  +++ GLC   R   A   F + +    E   N +TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 125 GLCRTGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            L  T +  +A+ LF E M+ G+        P+ + Y  +I GL + G ++ A  +   M
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGH-------SPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K      +   Y  LI GFC     +EA  LL EM + G++P+V + N +++  CK G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                LL  M+    +P+  T+ TL+ G+C  GKI+    +  SM+  G   ++  YN L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+  CK  +V+ A+ L++E+  K +   V T+N L  GL +    E+A +L  +M+    
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 364 AADTCTYRTFIDGLCV 379
             D  T    ++ L V
Sbjct: 560 FPDYVTVDVLMEWLPV 575



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 6/283 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++ L+G L    +    + LF    S G  PD   Y  +I+   + G++     +   +
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             + F  +   +  LI G C + R+ EA  L  ++K  G  P+V TYNTL++G C+ G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
                L  +M +         +P+ +T+  ++ G CK G +D+A  +   M    ++PN 
Sbjct: 440 AAVDELLGKMIDDG------CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V Y +LI   C   D + A  L  EM ++ V  NV + N ++  L      + A  L+D 
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
           M +    P+  T + LM+   + G+ +R+K      E    K 
Sbjct: 554 MREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKR 596



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPF-KGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           D F++N ++    + ++V     +Y  +     ++P VVTY  L +GL +  +   AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 355 FVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              M  Q  D+  D  T  T +DGLC   +V+   A
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA 230


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 186/403 (46%), Gaps = 36/403 (8%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNS-IGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           V +FN +L  LA+ +    +  ++  +     + PD+ TY IL+N  CK G+V     + 
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 70  GRILRSCF--APNVVTFTSLIKGLCAESRIVEAAALFTKLKA--FGCEPNVITYNTLING 125
             + R      P+VVT  +++ GLC   R+ EA A   +  +   GC PN +TYN LI+ 
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255

Query: 126 LCRTGHTIVALNLFKEMTNGN------------------GEIGVVF-------------K 154
            CR G+  +A  L ++M N                    G  G                K
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
            N VTYS ++  L     V  A ELF +   E  +P+ + Y ++I G   A    +A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
              M + G + +  + N+++   C+  ++  A  LL  M +  +RP+  TYNTL+ G C 
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G    V EL   M   GC+    ++  L++GYCK  +++EAL +   +   GI P  V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           YNTL   L +    + A++LF EM+   V A+  T+   + GL
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 187/376 (49%), Gaps = 12/376 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLF-KRLNSI-GLFPDLYTYSILINCFCKMGQVSLGF 66
           P V + N ++  L K+      L+   +R++S+ G  P+  TY+ LI+ FC++G +S+ +
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP--NVITYNTLIN 124
            +  ++       N+VT  +++ GLC   R   A   F + +    E   N +TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 125 GLCRTGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            L  T +  +A+ LF E M+ G+        P+ + Y  +I GL + G ++ A  +   M
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGH-------SPDAIMYFTMISGLTQAGRLEDACSMASSM 379

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           K      +   Y  LI GFC     +EA  LL EM + G++P+V + N +++  CK G  
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
                LL  M+    +P+  T+ TL+ G+C  GKI+    +  SM+  G   ++  YN L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+  CK  +V+ A+ L++E+  K +   V T+N L  GL +    E+A +L  +M+    
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 364 AADTCTYRTFIDGLCV 379
             D  T    ++ L V
Sbjct: 560 FPDYVTVDVLMEWLPV 575



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPF-KGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           D F++N ++    + ++V     +Y  +     ++P VVTY  L +GL +  +   AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 355 FVEM--QGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
              M  Q  D+  D  T  T +DGLC   +V+   A
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA 230


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 95  HKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A  L+ EM  +G++P+ ++   +++  CK G +D
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L  G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 329 SAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V +   L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 6/302 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M      +    +P+  TYS++I+GLCKE  +D A 
Sbjct: 173 SYNTLMNGYIRLGDLDEGFRLKSAM------LASGVQPDVYTYSVLINGLCKESKMDDAN 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+  TY TL+DG C  G ++   E    M     + D+
Sbjct: 287 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  L +G C+     +A  +  E+   G+KP   TY  + +   +     +  KL  E
Sbjct: 347 VAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 406

Query: 358 MQ 359
           MQ
Sbjct: 407 MQ 408



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y     GLC
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLC 357



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           DJY +S LI  + + G +      +       F     T   +++ L            +
Sbjct: 65  DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ ++
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ 
Sbjct: 179 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +
Sbjct: 299 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  D  TY   I+  C +  V
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 397



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 142 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGC 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLDSAFEHRK 335



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 12/278 (4%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIIDG 166
           Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I  
Sbjct: 16  YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 75

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
             + GF+  A E +   +         T   ++        +    G   E+++ G   +
Sbjct: 76  YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 135

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           +   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L  
Sbjct: 136 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 195

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  +  
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 197/400 (49%), Gaps = 42/400 (10%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+  L K +     L L   + + G    + TY+ LI+  CK G +     +  ++ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +  APNVVT+T+LI GLC   R  +A     ++   GCEP+++TYN+LI+GLC      
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  + +E+   +G I     P+ VTY+  I GLCK G +DK  E+  +M    ++P+VV
Sbjct: 133 DAGLVLQELMIESGRI-----PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T+ S+I G C AN  ++A  +   M+++G  P+ ++ +++++ L +  ++D    +L+ M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 254 VQC--------------------DVRPNA---------------FTYNTLMDGFCLTGKI 278
           V+                     D+   +               +T+N  +   C +GK 
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNT 337
              K + + M   G   +  SYN +I+G CK+  V++A  L  ++   G  KP V+ +NT
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNT 367

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDV-AADTCTYRTFIDG 376
           L  G  +  +  +A +L  EM+  ++   D  TY T IDG
Sbjct: 368 LISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDG 407



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 9/355 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV-SLGFV 67
           P V ++  L+  L K +     +   KR+   G  PDL TY+ LI+  C   ++   G V
Sbjct: 78  PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 137

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   ++ S   P+VVT+ + I GLC   ++ +   +  ++   G  P+V+T+ ++I+GLC
Sbjct: 138 LQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLC 197

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           +      A  +FK M     E G V  P+++TYSI++D L +   +D  +E+   M    
Sbjct: 198 KANRIDDAFQVFKGML----ERGCV--PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
                 TY  LIH    A D   A     + ++ G    V + N  +  LC++GK   A 
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNILING 306
            +L  M++    PN  +YN ++DG C +G ++   +L   M   G CK D   +N LI+G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 307 YCKNKEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           +CK   + +A  L  E+  K I  P VVTYNT+  G  +    ++A  L  EMQ 
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQA 426



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 147/303 (48%), Gaps = 7/303 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F  +   + +LI GLC   +   A  L   + A G + +V+TY TLI+GLC++G    A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
            L ++M +          PN VTY+ +IDGLCK      A +   +M      P++VTY 
Sbjct: 66  ALLQKMADAG------CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYN 119

Query: 197 SLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           SLIHG C AN  ++A  +L E M++ G  P+VV+ N  ++ LCK GK+D    +L+ M +
Sbjct: 120 SLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             + P+  T+ +++ G C   +I+   ++F  M   GC  D  +Y+I+++   +   ++ 
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
              +   +   G      TY  L H L      E A   + +        +  T+  FI 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 376 GLC 378
            LC
Sbjct: 300 ALC 302



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 166/322 (51%), Gaps = 9/322 (2%)

Query: 9   PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+ G    N+  D  L L + +   G  PD+ TY+  I+  CK G++  G  
Sbjct: 113 PDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLE 172

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + R   +P+VVTF S+I GLC  +RI +A  +F  +   GC P+ +TY+ +++ L 
Sbjct: 173 MLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLS 232

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R         + + M   +G   +     + TY+ +I  L + G ++ A   + Q     
Sbjct: 233 RANRLDTVEEVLEHMVK-SGHYAL-----SATYAPLIHALIRAGDIESASWAYEQAMEAG 286

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
               V T+ + I   C +  +  AK +L+ M++ G  PN++S N +++ LCK+G +D+A 
Sbjct: 287 CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAW 346

Query: 248 RLLDLMVQCD-VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-CKHDDFSYNILIN 305
           +L   M+     +P+   +NTL+ GFC  G++++ ++L   M++   C  D  +YN +I+
Sbjct: 347 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMID 406

Query: 306 GYCKNKEVEEALSLYNELPFKG 327
           G  K   +++A  L  E+   G
Sbjct: 407 GQSKFGSLKQAKLLLEEMQAVG 428



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 167/354 (47%), Gaps = 9/354 (2%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D   Y+ LI   CK  +      +   +  + +  +VVT+T+LI GLC    +  A AL 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            K+   GC PNV+TY  LI+GLC+      A+   K M     E      P+ VTY+ +I
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCE------PDLVTYNSLI 122

Query: 165 DGLCKEGFVDKAKELFLQMKYENLN-PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            GLC    +D A  +  ++  E+   P+VVTY + I G C A   ++   +L EM   G+
Sbjct: 123 HGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 182

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P+VV+   I++ LCK  ++D+A ++   M++    P++ TY+ ++D      +++ V+E
Sbjct: 183 SPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEE 242

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +   M   G      +Y  LI+   +  ++E A   Y +    G    V T+N     L 
Sbjct: 243 VLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALC 302

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV--RFTYARRKGNSG 395
              +   A  + + M  +    +  +Y   IDGLC    V   +  +R+  +SG
Sbjct: 303 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 59/121 (48%)

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           R +A  YNTL+ G C   K     EL   M + G      +Y  LI+G CK+ +++ A +
Sbjct: 7   RLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQA 66

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L  ++   G  P VVTY  L  GL + R+   A++    M  +    D  TY + I GLC
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 379 V 379
           +
Sbjct: 127 M 127



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 5/110 (4%)

Query: 291 MGCKH---DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M  +H   D   YN LI G CK ++   AL L + +   G   +VVTY TL  GL +   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKGNSG 395
            + A  L  +M     A +  TY   IDGLC   RP       +R   SG
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110


>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
 gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
          Length = 316

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 172/329 (52%), Gaps = 22/329 (6%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G  P++ TYS+LINC CK G  +    IF  +++S   PN  T+ SL+ G   E  +V+ 
Sbjct: 5   GQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDM 64

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +   +   G  P+   +N  I   C+ G    A   F +M     ++G  F P+ VTY
Sbjct: 65  NNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQ----QLG--FMPDIVTY 118

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +IDGLCK G +D A   F QM  + L+PN++T+T+LIHGF     W +A+ L  EM+D
Sbjct: 119 TTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMD 178

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
           +G+ PNV + N +++ L K GK+  A +L DLM +   +PN  +YNT++ G+ + G++  
Sbjct: 179 RGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGE 238

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           V +L   M  +G K +  + N L++G          LS+       G+KP V T  TL  
Sbjct: 239 VMKLLDDMLLIGLKPNAVNLNTLLDG---------MLSI-------GLKPNVDTCKTLID 282

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCT 369
              E  + E  L LF EM       DT T
Sbjct: 283 SCCEDDRIEDILTLFREMLSKADKTDTIT 311



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 22/262 (8%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+ PD + ++I I  +CK G++    + F ++ +  F P++VT+T++I GLC   R+ +A
Sbjct: 75  GMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 134

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
            + F ++   G  PN+IT+ TLI+G    G    A  LF EM +          PN  T+
Sbjct: 135 MSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG------IPPNVNTF 188

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
           + +ID L KEG V +A++LF  M      PNVV+Y ++IHG+  A +  E   LL +M+ 
Sbjct: 189 NSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 248

Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
            G++PN V+ N                 LLD M+   ++PN  T  TL+D  C   +I  
Sbjct: 249 IGLKPNAVNLNT----------------LLDGMLSIGLKPNVDTCKTLIDSCCEDDRIED 292

Query: 281 VKELFVSMESMGCKHDDFSYNI 302
           +  LF  M S   K D  + NI
Sbjct: 293 ILTLFREMLSKADKTDTITENI 314



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 22/328 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++++L+ CL K+        +F  +   G  P+  TY  L++ +   G +     +
Sbjct: 8   PNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNV 67

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++++   P+   F   I   C   R+ EA+  F K++  G  P+++TY T+I+GLC+
Sbjct: 68  KDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCK 127

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++ F +M +          PN +T++ +I G    G  +KA+ELF +M    +
Sbjct: 128 IGRLDDAMSRFCQMIDDG------LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI 181

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV T+ S+I          EA+ L   M   G +PNVVS N +++     G++    +
Sbjct: 182 PPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 241

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LLD M+   ++PNA   NTL+DG                M S+G K +  +   LI+  C
Sbjct: 242 LLDDMLLIGLKPNAVNLNTLLDG----------------MLSIGLKPNVDTCKTLIDSCC 285

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++  +E+ L+L+ E+  K  K   +T N
Sbjct: 286 EDDRIEDILTLFREMLSKADKTDTITEN 313



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 12/270 (4%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G  PNV+TY+ LIN LC++G    A  +F  M           KPN  TY  ++ G   E
Sbjct: 5   GQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQ------KPNAATYRSLLHGYATE 58

Query: 171 G-FVD--KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
           G  VD    K+L +Q     + P+   +   I+ +C     +EA     +M   G  P++
Sbjct: 59  GNLVDMNNVKDLMVQ---NGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDI 115

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
           V+   +++ LCK G++D+A      M+   + PN  T+ TL+ GF + GK  + +ELF  
Sbjct: 116 VTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYE 175

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M   G   +  ++N +I+   K  +V EA  L++ +P  G KP VV+YNT+ HG F   +
Sbjct: 176 MMDRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 235

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGL 377
               +KL  +M    +  +     T +DG+
Sbjct: 236 VGEVMKLLDDMLLIGLKPNAVNLNTLLDGM 265



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 2/208 (0%)

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M  +   PNVVTY+ LI+  C +    EA+ +   M+  G +PN  +   +++     G 
Sbjct: 1   MSRDGQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGN 60

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           + + + + DLMVQ  +RP+   +N  +  +C  G+++     F  M+ +G   D  +Y  
Sbjct: 61  LVDMNNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTT 120

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           +I+G CK   +++A+S + ++   G+ P ++T+ TL HG     + E+A +LF EM    
Sbjct: 121 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 180

Query: 363 VAADTCTYRTFIDGLCVRPQVRFTYARR 390
           +  +  T+ + ID L    +V  T AR+
Sbjct: 181 IPPNVNTFNSMIDRLFKEGKV--TEARK 206



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++  L K    D  +S F ++   GL P++ T++ LI+ F   G+      +
Sbjct: 113 PDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 172

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNV TF S+I  L  E ++ EA  LF  +   G +PNV++YNT+I+G   
Sbjct: 173 FYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFI 232

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L  +M      + +  KPN V  + ++DG+   G                L
Sbjct: 233 AGEVGEVMKLLDDM------LLIGLKPNAVNLNTLLDGMLSIG----------------L 270

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
            PNV T  +LI   C  +   +   L  EM+ +  + + ++ N+
Sbjct: 271 KPNVDTCKTLIDSCCEDDRIEDILTLFREMLSKADKTDTITENI 314



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V++FN ++  L K         LF  +   G  P++ +Y+ +I+ +   G+V     
Sbjct: 182 PPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 241

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +L     PN V   +L+ G+                 + G +PNV T  TLI+  C
Sbjct: 242 LLDDMLLIGLKPNAVNLNTLLDGML----------------SIGLKPNVDTCKTLIDSCC 285

Query: 128 RTGHTIVALNLFKEM 142
                   L LF+EM
Sbjct: 286 EDDRIEDILTLFREM 300


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 6/381 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S+  L+   AK       L + K + S G+  ++ TYS+LIN F K+   +  F I
Sbjct: 479 PSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAI 538

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +++    P+VV + ++I+  C    +  A  +  +++     P   T+  +I+G  R
Sbjct: 539 FEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFAR 598

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL++F +M   +G I     P   T++ +I GL ++  ++KA E+  +M    +
Sbjct: 599 AGEMKRALDVF-DMMRRSGCI-----PTVHTFNALILGLVEKRQMEKAIEILDEMALAGV 652

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PN  TYT+++HG+    D  +A     ++ D+G+Q +V +   ++   CK+G+M +A  
Sbjct: 653 SPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALA 712

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M   ++  N F YN L+DG+   G +    +L   M+  G K D  +Y   IN  C
Sbjct: 713 VTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACC 772

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K  ++  A  +  E+   G+KP V TY TL HG       E+AL+ F EM+   +  D  
Sbjct: 773 KAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKA 832

Query: 369 TYRTFIDGLCVRPQVRFTYAR 389
            Y   +  L  R  V   Y R
Sbjct: 833 VYHCLMTALLSRATVTEAYVR 853



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 175/370 (47%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+   A  +  +  LS  +++   G+   L TYSI++  F K+G        
Sbjct: 339 PTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRW 398

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F          N + + ++I   C    + +A AL  +++  G +  +  Y+T+++G   
Sbjct: 399 FKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTM 458

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+    L +F+ +     E G  F P+ V+Y  +I+   K G + KA E+   M+   +
Sbjct: 459 VGNEEKCLTVFERLK----ECG--FAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGI 512

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             N+ TY+ LI+GF    DW  A  +  ++V  G++P+VV  N I+   C  G MD A  
Sbjct: 513 KHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAIC 572

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           ++  M +   RP + T+  ++ GF   G++ R  ++F  M   GC     ++N LI G  
Sbjct: 573 MVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLV 632

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           + +++E+A+ + +E+   G+ P   TY T+ HG   +    +A + F +++   +  D  
Sbjct: 633 EKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVY 692

Query: 369 TYRTFIDGLC 378
           TY   +   C
Sbjct: 693 TYEALLKACC 702



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 172/392 (43%), Gaps = 49/392 (12%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           +++  V+S F+R+      P    Y ++++ + + G +      F  +      P    +
Sbjct: 289 ENWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVY 344

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
           TSLI        + EA +   K+K  G E +++TY+ ++ G  + G+   A   FKE  +
Sbjct: 345 TSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD 404

Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
            +  +      N + Y  +I   C+   +D+A+ L  +M+ E ++  +  Y +++ G+  
Sbjct: 405 RHSHM------NAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTM 458

Query: 205 ANDWNEAKGLLI--EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM--------- 253
               NE K L +   + + G  P+VVS   ++N   K GK+  A  +  +M         
Sbjct: 459 VG--NEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNM 516

Query: 254 --------------------------VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
                                     V+  ++P+   YN ++  FC  G ++R   +   
Sbjct: 517 KTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKE 576

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ 347
           M+    +    ++  +I+G+ +  E++ AL +++ +   G  PTV T+N L  GL E RQ
Sbjct: 577 MQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQ 636

Query: 348 AERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
            E+A+++  EM    V+ +  TY T + G   
Sbjct: 637 MEKAIEILDEMALAGVSPNEHTYTTIMHGYAA 668


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 7/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           NI +  L K+   D   S F+ L       +  +Y+ILIN FCK  ++     +FG +  
Sbjct: 70  NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
              AP+  T+ +LI GLC   R+ EA   + +L + G   + ITYN L++G C+      
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A+ L  E+    G +       +  Y+ IID L K+G + +A+  F +M+ + + P  VT
Sbjct: 190 AVELLNELVARGGVV------TSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVT 243

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           +T LI G C AN    AK +    ++ G  P+VV  + +M+  CK G +D A R+ +LM 
Sbjct: 244 FTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMT 303

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
                PN  + N L++G C   ++++ +E+F  +     K D  +Y+  ++G C+   V+
Sbjct: 304 NRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVD 363

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF-VEMQGNDVAADTCTYRTF 373
           +A  +   L  KG  P VV Y  L  GL  + + + A K+F V+M+    A +  T    
Sbjct: 364 QARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVL 423

Query: 374 IDGL 377
           ++G 
Sbjct: 424 VNGF 427



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 171/359 (47%), Gaps = 7/359 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+NIL+    K K  D  + LF  + + G  P   TY+ LI   C++ ++      + R+
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L S    + +T+  L+ G C   R+ EA  L  +L A G       YN +I+ L + G  
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A   F  M           +P  VT++++IDGLCK   V +AKE+F        +P+V
Sbjct: 223 HEAELFFNRMEKDG------VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSV 276

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V  + L+ GFC     +EA  +   M ++G  PN VS N+++N LCK  ++  A  + + 
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE 336

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +V+   +P+  TY+T MDG C   ++++ +++   +   G   D   Y  LI+G C    
Sbjct: 337 VVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGR 396

Query: 313 VEEALSLYN-ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
           ++EA  ++  ++   G  P   T N L +G     + + A +LF       V  D  T+
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTF 455



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 6/364 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           ++L+  L+K    +  L + K +       + +  +I I+  CK   +      F  +  
Sbjct: 35  DLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD 94

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
                N V++  LI   C   RI EA  LF ++KA GC P+  TYNTLI GLCR      
Sbjct: 95  FRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGE 154

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A   ++ + +     G  F    +TY+I++DG CK   V +A EL  ++           
Sbjct: 155 AQQFYERLLSSGA--GASF----ITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAP 208

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  +I         +EA+     M   GV+P  V+  V+++ LCK  ++  A  +    +
Sbjct: 209 YNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL 268

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +    P+    + LMDGFC  G ++    +F  M + GC  +D S NILING CK K + 
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLS 328

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A  ++ E+  +  KP VVTY+T   GL    + ++A ++   +       D   Y   I
Sbjct: 329 QAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALI 388

Query: 375 DGLC 378
            GLC
Sbjct: 389 SGLC 392



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 42/339 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM--------- 59
           P  S++N L+G L + +        ++RL S G      TY+IL++ FCK          
Sbjct: 134 PSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVEL 193

Query: 60  --------------------------GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                     G++    + F R+ +    P  VTFT LI GLC 
Sbjct: 194 LNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCK 253

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
            +R+  A  +F      G  P+V+  + L++G C+ G    A  +F+ MTN         
Sbjct: 254 ANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG------C 307

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN V+ +I+I+GLCK   + +A+E+F ++      P+VVTY++ + G C A+  ++A+ 
Sbjct: 308 TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQ 367

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL-MVQCDVRPNAFTYNTLMDGF 272
           +L  +VD+G  P+VV    +++ LC  G++D A ++ ++ M      PN FT N L++GF
Sbjct: 368 VLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGF 427

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            L G+++  +ELF      G + D  +++ + N   K +
Sbjct: 428 GLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTE 466



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 154/357 (43%), Gaps = 77/357 (21%)

Query: 91  LCAESRIVEAAALFTKLKAFGC----------------------------------EPNV 116
           LC   ++ EA  LF  L + GC                                  E ++
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHL 68

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           +  N  I+ LC++     A + F+E+ +  G +      NTV+Y+I+I+  CK   +D+A
Sbjct: 69  V--NITIDSLCKSDMIDKAESWFQELKDFRGLV------NTVSYNILINAFCKTKRIDEA 120

Query: 177 KELFLQMK------------------------------YENL-----NPNVVTYTSLIHG 201
            +LF +MK                              YE L       + +TY  L+ G
Sbjct: 121 IQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDG 180

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           FC A+   EA  LL E+V +G        N I++ L K GK+  A    + M +  VRP 
Sbjct: 181 FCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQ 240

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
             T+  L+DG C   ++ R KE+F S    G        + L++G+CK   V+EA  ++ 
Sbjct: 241 EVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFE 300

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            +  +G  P  V+ N L +GL + ++  +A ++F E+       D  TY TF+DGLC
Sbjct: 301 LMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLC 357



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 7/237 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F +L+  L K         +F      G  P +   S L++ FCK G V   + I
Sbjct: 239 PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRI 298

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN V+   LI GLC   R+ +A  +F ++     +P+V+TY+T ++GLCR
Sbjct: 299 FELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCR 358

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-LQMKYEN 187
                 A  +   + +  G       P+ V Y+ +I GLC  G +D+A+++F + M+   
Sbjct: 359 AHRVDQARQVLCMLVDKGG------TPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAG 412

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
             PN  T   L++GF  A   +EA+ L    V++GVQP+  + + + N   K    D
Sbjct: 413 CAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWD 469



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 3/182 (1%)

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            CH    +EA  L   +V  G     + +++++ EL K G+ +   +++ LM+       
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
               N  +D  C +  I++ +  F  ++      +  SYNILIN +CK K ++EA+ L+ 
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
           E+   G  P+  TYNTL  GL  + +   A + +  +  +   A   TY   +DG C   
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185

Query: 382 QV 383
           +V
Sbjct: 186 RV 187


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 178/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S  N  +  L K    +  L   +R+   G+ PD+ TY+ LI  +C + ++     +
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 327

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-FGCEPNVITYNTLINGLC 127
              +      P+ V++ +++  LC E +I E   L  K+       P+ +TYNTLI+ L 
Sbjct: 328 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLS 387

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL   KE  +        F  + V YS I+   C++G +D+AK L + M    
Sbjct: 388 KHGHADDALAFLKEAQDKG------FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            NP+VVTYT+++ GFC     +EAK +L +M   G +PN VS   ++N LC +GK   A 
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++++  +    PNA TY  +M G    GK++   +L   M   G        N+LI   
Sbjct: 502 EMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 561

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+N++V EA     E   KG    VV + T+ HG  +I   E AL +  +M  +    D 
Sbjct: 562 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDA 621

Query: 368 CTYRTFIDGL 377
            TY    D L
Sbjct: 622 VTYTALFDAL 631



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 9/353 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRL--NSIGLFPDLYTYSILINCFCKMGQVSLG 65
           PP   S+  ++G L K K  + V  L +++  NS  L PD  TY+ LI+   K G     
Sbjct: 337 PPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNS-NLIPDQVTYNTLIHMLSKHGHADDA 395

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                      F  + V +++++   C + R+ EA +L   + + GC P+V+TY  +++G
Sbjct: 396 LAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDG 455

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            CR G    A  + ++M           KPNTV+Y+ +++GLC  G   +A+E+    + 
Sbjct: 456 FCRLGRIDEAKKILQQMYKHG------CKPNTVSYTALLNGLCHSGKSLEAREMINVSEE 509

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN +TY +++HG       +EA  L  EMV++G  P  V  N+++  LC+N K+  
Sbjct: 510 HWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE 569

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A + L+  +      N   + T++ GFC  G +     +   M   G   D  +Y  L +
Sbjct: 570 AKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFD 629

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
              K   ++EA  L  ++  KG+ PT VTY ++ H   +  + +  L L  +M
Sbjct: 630 ALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM 682



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 173/369 (46%), Gaps = 5/369 (1%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P  +F  ++   ++       L +   +   G+ P L   +  I    K G++       
Sbjct: 234 PPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFL 293

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
            R+  +   P++VT+ SLIKG C  +RI +A  L   L + GC P+ ++Y T++  LC+ 
Sbjct: 294 ERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKE 353

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                   L ++M   +  I     P+ VTY+ +I  L K G  D A     + + +  +
Sbjct: 354 KKIEEVKCLMEKMVWNSNLI-----PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFH 408

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            + V Y++++H FC     +EAK L+I+M  +G  P+VV+   I++  C+ G++D A ++
Sbjct: 409 IDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKI 468

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  M +   +PN  +Y  L++G C +GK    +E+    E      +  +Y  +++G  +
Sbjct: 469 LQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRR 528

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             ++ EA  L  E+  KG  PT V  N L   L + ++   A K   E      A +   
Sbjct: 529 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN 588

Query: 370 YRTFIDGLC 378
           + T I G C
Sbjct: 589 FTTVIHGFC 597



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 149/326 (45%), Gaps = 31/326 (9%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ ++    +    D   SL   + S G  PD+ TY+ +++ FC++G++     I  ++ 
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +    PN V++T+L+ GLC   + +EA  +    +     PN ITY  +++GL R G   
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLS 533

Query: 134 VALNLFKEMTNGN-----GEIGVVFKP------------------------NTVTYSIII 164
            A +L +EM          EI ++ +                         N V ++ +I
Sbjct: 534 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 593

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            G C+ G ++ A  +   M     +P+ VTYT+L          +EA  L+++M+ +G+ 
Sbjct: 594 HGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLD 653

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P  V+   +++   + G++D+   LL+ M++   +P    YN +++  C  G +   ++L
Sbjct: 654 PTPVTYRSVIHRYSQWGRVDDMLNLLEKMLK--RQPFRTVYNQVIEKLCDFGNLEEAEKL 711

Query: 285 FVSMESMGCKHDDFSYNILINGYCKN 310
              +     K D  + ++L+  Y K 
Sbjct: 712 LGKVLRTASKVDANTCHVLMESYLKK 737



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 8/233 (3%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+  TY  +++   + G++S    +   ++   F P  V    LI+ LC   ++VEA   
Sbjct: 514 PNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 573

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             +    GC  NV+ + T+I+G C+ G    AL++  +M            P+ VTY+ +
Sbjct: 574 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKH------PDAVTYTAL 627

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
            D L K+G +D+A EL ++M  + L+P  VTY S+IH +      ++   LL +M+ +  
Sbjct: 628 FDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR-- 685

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           QP     N ++ +LC  G ++ A +LL  +++   + +A T + LM+ +   G
Sbjct: 686 QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKG 738



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 1/229 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           +  + V Y  ++D L K      A+ +   M    +      +  ++  +  A     A 
Sbjct: 196 YSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNAL 255

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L  M   GV+P++   N  +  L K GK++ A + L+ M    ++P+  TYN+L+ G+
Sbjct: 256 RVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGY 315

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPT 331
           C   +I    EL   + S GC  D  SY  ++   CK K++EE   L  ++ +   + P 
Sbjct: 316 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPD 375

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            VTYNTL H L +   A+ AL    E Q      D   Y   +   C +
Sbjct: 376 QVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQK 424



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 4/153 (2%)

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVR--PNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           +++ L K      A R+L LM +  +   P AF Y  +M  +   GK+     +   M+ 
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLRNALRVLTLMQK 263

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G +      N  I    K  ++E+AL     +   GIKP +VTYN+L  G  ++ + E 
Sbjct: 264 AGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIED 323

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           AL+L   +       D  +Y T +  LC   ++
Sbjct: 324 ALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 356


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 195/378 (51%), Gaps = 9/378 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M +  PSP  V+ F++L+   +KN   +  L  +K++ S+GL P ++    +I  + K  
Sbjct: 364 MENEGPSPNSVT-FSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQ 422

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +      +F     +  A NV    +++  LC + +I +A  L  K+++ G  PNV++YN
Sbjct: 423 KHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYN 481

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            ++   CR  +  +A  +F  M     E G+  KPN  TYSI+IDG  K        E+ 
Sbjct: 482 NVMLAHCRKKNMDLARTVFSNML----EKGL--KPNNYTYSILIDGCFKNHDEQNVLEVV 535

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCK 239
            QM   N+  N V Y ++I+G C     ++A+ LL  M+++     + +S N I++   K
Sbjct: 536 NQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIK 595

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G+MD A    + M    + PN  TY +LMDG C   ++++  E+   M++ G K D  +
Sbjct: 596 EGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPA 655

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y  LI+G+CK   +E A +L++EL  +G+ P+   YN+L  G   +     AL L+ +M 
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715

Query: 360 GNDVAADTCTYRTFIDGL 377
            + +  D  TY T IDGL
Sbjct: 716 KDGLRCDLGTYTTLIDGL 733



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 176/392 (44%), Gaps = 30/392 (7%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N +L  L K    D    L +++ S G+ P++ +Y+ ++   C+   + L   +F  +L 
Sbjct: 446 NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLE 505

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               PN  T++ LI G            +  ++ +   E N + Y T+INGLC+ G T  
Sbjct: 506 KGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSK 565

Query: 135 ALNLFKEMTN-------------------GNGEIGVV-----------FKPNTVTYSIII 164
           A  L   M                       GE+                PN +TY+ ++
Sbjct: 566 ARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLM 625

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           DGLCK   +D+A E+  +MK + +  ++  Y +LIHGFC  ++   A  L  E++++G+ 
Sbjct: 626 DGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLN 685

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P+    N +++     G M  A  L   M++  +R +  TY TL+DG    G +    +L
Sbjct: 686 PSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDL 745

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           +  M+++G   D+  Y +++NG  K  +  + + ++ E+    + P V+ YN +  G + 
Sbjct: 746 YTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 805

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
               + A +L  EM    +  D  T+   + G
Sbjct: 806 EGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 188/382 (49%), Gaps = 10/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  ++    K  + +  +     + S G+  ++   + LI   CK   +     +
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++     +PN VTF+ LI+       + +A   + K+++ G  P+V   +T+I G  +
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL LF E    + E G+    N    + I+  LCK+G +DKA EL  +M+   +
Sbjct: 421 GQKHEEALKLFDE----SFETGLA---NVFICNTILSWLCKQGKIDKATELLRKMESRGI 473

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV+Y +++   C   + + A+ +   M+++G++PN  + +++++   KN    N   
Sbjct: 474 GPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLE 533

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILING 306
           +++ M   ++  N   Y T+++G C  G+ ++ +EL  +M  E   C     SYN +I+G
Sbjct: 534 VVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDG 592

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           + K  E++ A++ Y E+   GI P V+TY +L  GL +  + ++AL++  EM+   V  D
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652

Query: 367 TCTYRTFIDGLCVRPQVRFTYA 388
              Y   I G C +  +    A
Sbjct: 653 IPAYGALIHGFCKKSNMESASA 674



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 183/417 (43%), Gaps = 44/417 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   N  L  L +         L+ R+ +IG+  D  T  +L+    +  + +    +
Sbjct: 195 PFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEV 254

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK-------------------- 108
           F R +     P+ + ++  ++  C    +  A +L  ++K                    
Sbjct: 255 FSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASV 314

Query: 109 ----------------AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
                           + G   NV+   +LI G C+      AL+LF +M N        
Sbjct: 315 KQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGP----- 369

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN+VT+S++I+   K G ++KA E + +M+   L P+V    ++I G+       EA 
Sbjct: 370 -SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  E  + G+  NV   N I++ LCK GK+D A+ LL  M    + PN  +YN +M   
Sbjct: 429 KLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAH 487

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C    ++  + +F +M   G K ++++Y+ILI+G  KN + +  L + N++    I+   
Sbjct: 488 CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNG 547

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC-TYRTFIDGLCVRPQVRFTYA 388
           V Y T+ +GL ++ Q  +A +L   M        +C +Y + IDG     ++ +  A
Sbjct: 548 VVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVA 604



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 167/343 (48%), Gaps = 7/343 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +++IL+    KN     VL +  ++ S  +  +   Y  +IN  CK+GQ S    +   +
Sbjct: 514 TYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 573

Query: 73  LRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +    F  + +++ S+I G   E  +  A A + ++ A G  PNVITY +L++GLC+   
Sbjct: 574 IEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              AL +  EM N     GV  K +   Y  +I G CK+  ++ A  LF ++  E LNP+
Sbjct: 634 MDQALEMRDEMKNK----GV--KLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPS 687

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
              Y SLI GF +  +   A  L  +M+  G++ ++ +   +++ L K G +  AS L  
Sbjct: 688 QPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYT 747

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M    + P+   Y  +++G    G+  +V ++F  M+      +   YN +I G+ +  
Sbjct: 748 EMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 807

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            ++EA  L++E+  KGI P   T++ L  G     Q  RA  L
Sbjct: 808 NLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 149/334 (44%), Gaps = 8/334 (2%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            ++ L+N + K  Q      I  ++L     P V      +  L   + I EA  L++++
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            A G + +  T   L+    R      AL +F        E      P+++ YS+ +   
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAE------PDSLLYSLAVQAC 277

Query: 168 CKEGFVDKAKELFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           CK   +  A  L  +MK + L  P+  TYTS+I       +  +A     EMV  G+  N
Sbjct: 278 CKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMN 337

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           VV++  ++   CKN  + +A  L   M      PN+ T++ L++ F   G++ +  E + 
Sbjct: 338 VVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYK 397

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            MES+G     F  + +I G+ K ++ EEAL L++E  F+     V   NT+   L +  
Sbjct: 398 KMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFICNTILSWLCKQG 456

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           + ++A +L  +M+   +  +  +Y   +   C +
Sbjct: 457 KIDKATELLRKMESRGIGPNVVSYNNVMLAHCRK 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 42/291 (14%)

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L    K FG E N   +N L+N   +   T  A+++  +M     E+GV+  P     + 
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQML----ELGVI--PFVPYVNR 202

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            +  L +   + +AKEL+ +M    ++ +  T   L+          EA  +    +++G
Sbjct: 203 TLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERG 262

Query: 223 VQP----------------NVVSSNVIMNE-----LC---------------KNGKMDNA 246
            +P                N+  +N ++ E     LC               K G M++A
Sbjct: 263 AEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDA 322

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
            R  D MV   +  N     +L+ G C    +    +LF  ME+ G   +  ++++LI  
Sbjct: 323 IRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIER 382

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
           + KN E+E+AL  Y ++   G+ P+V   +T+  G  + ++ E ALKLF E
Sbjct: 383 FSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 433



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 1/189 (0%)

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N   +  L++ +      + A  ++ +M++ GV P V   N  ++ L +   +  A  L 
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             MV   V  +  T   LM       K     E+F      G + D   Y++ +   CK 
Sbjct: 221 SRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKT 280

Query: 311 KEVEEALSLYNELPFKGI-KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
             +  A SL  E+  K +  P+  TY ++     +    E A++   EM  + ++ +   
Sbjct: 281 LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVA 340

Query: 370 YRTFIDGLC 378
             + I G C
Sbjct: 341 ATSLITGHC 349



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 4/143 (2%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQ----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           LI     +N    A  L+  +VD     G + N  + N ++N   K+ + D A  +++ M
Sbjct: 129 LIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQM 188

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           ++  V P     N  +        I   KEL+  M ++G   D+ +  +L+    + ++ 
Sbjct: 189 LELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKP 248

Query: 314 EEALSLYNELPFKGIKPTVVTYN 336
            EAL +++    +G +P  + Y+
Sbjct: 249 AEALEVFSRAIERGAEPDSLLYS 271


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 185/366 (50%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ LL CLAK         +++R+ + G       Y  ++N  CK G V    +   ++L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 132
           R  F  +    TSL+   C    + EA  +F K+ K   C PN +TY+ LI+GLC  G  
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L +EM     E G   +P+T TY+++I   C  G  DKA ++  +M  +   PNV
Sbjct: 216 EEAFQLKQEMV----EKGC--QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 269

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT LI   C      EA G+  +M+  G+ P +++ N ++N  CK G + +A +LL +
Sbjct: 270 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 329

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + + +PN  TYN LM+G C   K  +   L   +   G   D  +YNIL++G+CK  +
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 389

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A +++N +   G++P   T+  L  GL ++ + E+A  +   M    ++ D  T+  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 373 FIDGLC 378
            IDG C
Sbjct: 450 LIDGHC 455



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 191/403 (47%), Gaps = 41/403 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+         D  + +   + +    P+++TY+ILI+  C+ G++     +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P ++TF +LI G C E  +V A  L + ++   C+PN+ TYN L+ GLCR
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +  A  L + + + NG +     P+ VTY+I++DG CKEG ++ A  +F  M    L
Sbjct: 352 VSKSYKAFLLLRRVVD-NGLL-----PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------- 241
            P+  T+T+LI G C      +A G+L  MV +G+  + V+   +++  CK G       
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 242 ----------------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                       K++ A+ +L  M++  + P+  T+  L++G C
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+     ++   M+  GC  + ++Y I+ING C N  VEEA ++   +   G+ P   
Sbjct: 526 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 585

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           TY  L     +  + +RA ++   M  N    ++  Y   + G
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 176/341 (51%), Gaps = 11/341 (3%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR--SCFAPNVVTFTSLIKGLCAESRI 97
           +G   D +  + L+   C+   +   F +F ++ +  SC  PN VT++ LI GLC   R+
Sbjct: 157 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESC-RPNSVTYSILIHGLCEAGRL 215

Query: 98  VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
            EA  L  ++   GC+P+  TY  LI   C  G T  A+ +  EM            PN 
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK------ACVPNV 269

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
            TY+I+ID LC+EG +++A  +F +M    L P ++T+ +LI+G+C    W  +   L+ 
Sbjct: 270 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG-WVVSAFQLLS 328

Query: 218 MVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           ++++G  +PN+ + N +M  LC+  K   A  LL  +V   + P+  TYN L+DGFC  G
Sbjct: 329 VMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEG 388

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
           ++N    +F SM S G + D F++  LI+G CK   +E+A  +   +  KGI    VT+ 
Sbjct: 389 QLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 448

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            L  G  +I +A+    LF  M  N       T+  F+D L
Sbjct: 449 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 489



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL+  L +    +    L + +   G  P   TY++LI   C +G       +
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV T+T LI  LC E +I EA  +F K+   G  P +IT+N LING C+
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M  GN       KPN  TY+ +++GLC+     KA  L  ++    L
Sbjct: 317 EGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY  L+ GFC     N A  +   M   G++P+  +   +++ LCK G+++ A+ 
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  MV+  +  +  T+  L+DG C  GK   V  LF +M    C     ++N  ++   
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++ EA ++  ++   G+ P+VVT+  L  G     +   +LK+   M+    + +  
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 550

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 551 TYTIIINGLC 560



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 11/378 (2%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+  L + +K Y   L L +R+   GL PD  TY+IL++ FCK GQ+++ F 
Sbjct: 337 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +  +   P+  TFT+LI GLC   R+ +A  +   +   G   + +T+  LI+G C
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G       LF+ M                T++  +D L K+  +++A  +  +M    
Sbjct: 456 KIGKAKDVCFLFENMVENR------CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVT+T LI G C A +   +  +L  M   G  PNV +  +I+N LC NG+++ A 
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M    V PN FTY  L+      G+++R  ++  +M   GC+ +   Y+ L++G+
Sbjct: 570 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629

Query: 308 CKNKEV--EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             +       ALS   +L  + +       N L   +F +   + ALK+  E++   V  
Sbjct: 630 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPT 689

Query: 366 DTCTYRTFIDGLCVRPQV 383
           +   Y   + GLC   ++
Sbjct: 690 ED-LYNFLVVGLCKEGRI 706



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 157/341 (46%), Gaps = 14/341 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + +FN L+    K     +   L   +      P++ TY+ L+   C++ +   
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F++  R++ +   P+ VT+  L+ G C E ++  A  +F  + + G EP+  T+  LI+
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKAKELF 180
           GLC+ G           +   NG +G + K     + VT++ +IDG CK G       LF
Sbjct: 418 GLCKLGR----------LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M          T+   +         NEA  +L +M+  G+ P+VV+  +++   C+ 
Sbjct: 468 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 527

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+   + ++L+ M Q    PN +TY  +++G C  G++   + +  SM S G   + F+Y
Sbjct: 528 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTY 587

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            +L+  + K   ++ A  + + +   G +P    Y+ L  G
Sbjct: 588 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 146/342 (42%), Gaps = 46/342 (13%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF---T 105
           YS L+ C  K+    + F+++ R++   F    + + +++  LC ++  V+AA +F    
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKV 154

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
               FG + +V T   L N  CR      A  +F++M+                      
Sbjct: 155 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMS---------------------- 190

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                             K E+  PN VTY+ LIHG C A    EA  L  EMV++G QP
Sbjct: 191 ------------------KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 232

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  +  V++   C  G  D A ++LD M      PN  TY  L+D  C  GKI     +F
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G      ++N LINGYCK   V  A  L + +     KP + TYN L  GL  +
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            ++ +A  L   +  N +  D  TY   +DG C   Q+   +
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 78/421 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++NIL+    K    +   ++F  +NS GL PD +T++ LI+  CK+G++     I
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
            G +++   + + VTFT+LI G C                                    
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + ++ EA A+  K+  +G  P+V+T+  LI G CR G T ++L + + M           
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG------C 545

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN  TY+III+GLC  G V++A+ +   M    ++PN  TY  L+     A   + A  
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 605

Query: 214 LLIEMVDQGVQPN-----------VVSSNVI-MNELCKNGKMDNAS-------------- 247
           ++  MV  G QPN           V+S+  I    L   G +D  S              
Sbjct: 606 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 665

Query: 248 --RLLDLMVQCDVR--------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
             RL+D+     +R        P    YN L+ G C  G+I    +L   M   G    D
Sbjct: 666 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL-FPD 724

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            + + +I  YCK  + +  L     +      P+  +Y  + HGL    + + A KL  +
Sbjct: 725 KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 784

Query: 358 M 358
           +
Sbjct: 785 L 785



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 68/309 (22%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN  L  L K+   +   ++  ++   GL P + T++ILI   C+ G+ +L   +  R+
Sbjct: 481 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 540

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--------------------- 111
            ++  +PNV T+T +I GLC   R+ EA  +   + +FG                     
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600

Query: 112 --------------CEPNVITYNTLING------------LCRTGHTIVALNLFKEMTNG 145
                         C+PN   Y+ L++G            L  TG  + A +L  E  + 
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD-LDARSLSSEENDN 659

Query: 146 NGEIGVVFK-------------------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           N     VF+                   P    Y+ ++ GLCKEG + +A +L   M   
Sbjct: 660 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 719

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+    +S+I  +C    ++     +  ++D    P+  S   +++ L   G++  A
Sbjct: 720 GLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778

Query: 247 SRLLDLMVQ 255
            +L+  +V+
Sbjct: 779 QKLVSDLVR 787


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 206/437 (47%), Gaps = 60/437 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N+L+  L  +  ++    +F ++   G  P+ +++ IL+  +C+ G       +
Sbjct: 149 PETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL 208

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN V + +LI   C E R  EA  L  +++  G  P+V+T+N+ I+ LC 
Sbjct: 209 LDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS 268

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  +F++M   + E+G+  +PN  T++++++G CKEG +++AK L   MK    
Sbjct: 269 AGKILEASRIFRDMQI-DEELGLP-RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGN 326

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
              + +Y   + G        EA+  L EMVD+G++PN+ S N +M+ LCKNG + +A  
Sbjct: 327 LMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARM 386

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC--------------- 293
           ++ LM+   + P+  TY+TL+ G C TGK+ +   +   M   GC               
Sbjct: 387 IMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLW 446

Query: 294 -------------KHDDFSY-------NILINGYCKNKEVEEALSLYNELPFKGIK---- 329
                        K ++ SY       NI+I+G CK+ +++EA+ +   +   G      
Sbjct: 447 KEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGN 506

Query: 330 -------------------PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
                              P ++TY+ + +GL +  + + A K F+EM G  +  D+  Y
Sbjct: 507 LGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIY 566

Query: 371 RTFIDGLCVRPQVRFTY 387
            TFI   C   ++   +
Sbjct: 567 DTFIHSFCKHGKISSAF 583



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 185/403 (45%), Gaps = 35/403 (8%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N L+    +    +    L +R+   GLFPD+ T++  I+  C  G++     IF R +
Sbjct: 224 YNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIF-RDM 282

Query: 74  R-----SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +         PN+ TF  +++G C E  + EA  L   +K  G    + +YN  + GL R
Sbjct: 283 QIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVR 342

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A    KEM +   E      PN  +++ ++DGLCK G +  A+ +   M    +
Sbjct: 343 NGKLLEAQLALKEMVDKGIE------PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY++L+HG C      +A  +L EM+ +G  PN  + N++++ L K G++  A +
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------- 292
           LL  M +     +  T N ++DG C +GK++   E+   M   G                
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 293 -------CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
                  C  D  +Y+I+ING CK   ++EA   + E+  K + P  + Y+T  H   + 
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
            +   A ++  +M+         TY + I GL  + Q+   Y 
Sbjct: 577 GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYG 619



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 53/424 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SFN ++  L KN        +   + S G+ PD  TYS L++  C  G+V     I
Sbjct: 363 PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNI 422

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R   +PN  T   L+  L  E RI EA  L  K+     + + +T N +I+GLC+
Sbjct: 423 LHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCK 482

Query: 129 TGHTIVALNLFKEM---------TNGNGEIGVVFK--------PNTVTYSIIIDGLCKEG 171
           +G    A+ + + M           GN  IG+V          P+ +TYSIII+GLCK G
Sbjct: 483 SGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAG 542

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH--------------------------- 204
            +D+A++ F++M  ++L+P+ + Y + IH FC                            
Sbjct: 543 RLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYN 602

Query: 205 --------ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
                    N   E  GLL +M ++G+ PN+ + N +++ LC+ G++ +A+ LLD M+Q 
Sbjct: 603 SLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQK 662

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
            + PN  ++  L+  FC       VKE+F    S+ C H +  Y+++ N      EV EA
Sbjct: 663 GISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI-CGHKEALYSLMFNELLIGGEVSEA 721

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L++    +        YN L   L +    E A  +  +M       D  ++   IDG
Sbjct: 722 KELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDG 781

Query: 377 LCVR 380
           L  R
Sbjct: 782 LGKR 785



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 7/286 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++I++  L K    D     F  +    L PD   Y   I+ FCK G++S  F +
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +     ++ T+ SLI GL ++++I E   L   +K  G  PN+ TYN +I+ LC 
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A +L  EM            PN  ++ ++I   CK       KE+F ++     
Sbjct: 646 GGRIKDATSLLDEMLQKG------ISPNISSFRLLIKAFCKASDFGVVKEVF-EIALSIC 698

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
                 Y+ + +      + +EAK L    +D+         N ++ +LCK+  ++NAS 
Sbjct: 699 GHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASD 758

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           +L  M+    R +  ++  ++DG    GK +   EL   M  M  +
Sbjct: 759 ILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYE--NLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           V+   +I  L K G  D A   F   + +     P V  Y  ++      +  +    L 
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +MV  GV P   + N+++  LC +G+ ++A  + D M     RPN F++  L+ G+C  
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G   R  EL   M S G + +   YN LI+ +C+    EEA  L   +   G+ P VVT+
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAA----DTCTYRTFIDGLC 378
           N+    L    +   A ++F +MQ ++       +  T+   ++G C
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFC 306



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 4/227 (1%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P    Y+++++   +E  VD    L+  M    ++P   T   LI G C +  + +A+ +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
             +M  +G +PN  S  +++   C+ G    A  LLD M    V+PN   YNTL+  FC 
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK---GI-KP 330
            G+    + L   M   G   D  ++N  I+  C   ++ EA  ++ ++      G+ +P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + T+N +  G  +    E A  L   M+ N    +  +Y  ++ GL
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGL 340



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%)

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           P V   N+++    +  K+D+ S L   MV   V P  +T N L+ G C +G+    +E+
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F  M   GC+ ++FS+ IL+ GYC+      AL L + +   G++P  V YNTL      
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             + E A +L   M+ + +  D  T+ + I  LC   ++
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKI 272


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 185/366 (50%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ LL CLAK         +++R+ + G       Y  ++N  CK G V    +   ++L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 132
           R  F  +    TSL+   C    + EA  +F K+ K   C PN +TY+ LI+GLC  G  
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L +EM     E G   +P+T TY+++I   C  G  DKA ++  +M  +   PNV
Sbjct: 282 EEAFQLKQEMV----EKGC--QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 335

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT LI   C      EA G+  +M+  G+ P +++ N ++N  CK G + +A +LL +
Sbjct: 336 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 395

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + + +PN  TYN LM+G C   K  +   L   +   G   D  +YNIL++G+CK  +
Sbjct: 396 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 455

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A +++N +   G++P   T+  L  GL ++ + E+A  +   M    ++ D  T+  
Sbjct: 456 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515

Query: 373 FIDGLC 378
            IDG C
Sbjct: 516 LIDGHC 521



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 191/404 (47%), Gaps = 41/404 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+         D  + +   + +    P+++TY+ILI+  C+ G++     +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P ++TF +LI G C E  +V A  L + ++   C+PN+ TYN L+ GLCR
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +  A  L + + + NG +     P+ VTY+I++DG CKEG ++ A  +F  M    L
Sbjct: 418 VSKSYKAFLLLRRVVD-NGLL-----PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------- 241
            P+  T+T+LI G C      +A G+L  MV +G+  + V+   +++  CK G       
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 242 ----------------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                       K++ A+ +L  M++  + P+  T+  L++G C
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+     ++   M+  GC  + ++Y I+ING C N  VEEA ++   +   G+ P   
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           TY  L     +  + +RA ++   M  N    ++  Y   + G 
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL+  L +    +    L + +   G  P   TY++LI   C +G       +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV T+T LI  LC E +I EA  +F K+   G  P +IT+N LING C+
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 382

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M  GN       KPN  TY+ +++GLC+     KA  L  ++    L
Sbjct: 383 EGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY  L+ GFC     N A  +   M   G++P+  +   +++ LCK G+++ A+ 
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  MV+  +  +  T+  L+DG C  GK   V  LF +M    C     ++N  ++   
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++ EA ++  ++   G+ P+VVT+  L  G     +   +LK+   M+    + +  
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 616

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 617 TYTIIINGLC 626



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 14/342 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + +FN L+    K     +   L   +      P++ TY+ L+   C++ +   
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F++  R++ +   P+ VT+  L+ G C E ++  A  +F  + + G EP+  T+  LI+
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKAKELF 180
           GLC+ G           +   NG +G + K     + VT++ +IDG CK G       LF
Sbjct: 484 GLCKLGR----------LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M          T+   +         NEA  +L +M+  G+ P+VV+  +++   C+ 
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 593

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+   + ++L+ M Q    PN +TY  +++G C  G++   + +  SM S G   + F+Y
Sbjct: 594 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTY 653

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            +L+  + K   ++ A  + + +   G +P    Y+ L  G 
Sbjct: 654 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 146/342 (42%), Gaps = 46/342 (13%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF---T 105
           YS L+ C  K+    + F+++ R++   F    + + +++  LC ++  V+AA +F    
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKV 220

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
               FG + +V T   L N  CR      A  +F++M+                      
Sbjct: 221 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMS---------------------- 256

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                             K EN  PN VTY+ LIHG C A    EA  L  EMV++G QP
Sbjct: 257 ------------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 298

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  +  V++   C  G  D A ++LD M      PN  TY  L+D  C  GKI     +F
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G      ++N LINGYCK   V  A  L + +     KP + TYN L  GL  +
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            ++ +A  L   +  N +  D  TY   +DG C   Q+   +
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 188/434 (43%), Gaps = 85/434 (19%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+  L + +K Y   L L +R+   GL PD  TY+IL++ FCK GQ+++ F 
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +  +   P+  TFT+LI GLC   R+ +A  +   +   G   + +T+  LI+G C
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 521

Query: 128 RTGHTIVALNLFKEMTN-------------------------GNGEIGVVFK----PNTV 158
           + G       LF+ M                            N  +G + K    P+ V
Sbjct: 522 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVV 581

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
           T++I+I+G C+ G    + ++  +MK    +PNV TYT +I+G C+     EA+ +L  M
Sbjct: 582 THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 641

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL---- 274
              GV PN  +  V++    K G++D A +++  MV+   +PN+  Y+ L+ GF L    
Sbjct: 642 SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTA 701

Query: 275 --------TGKI----------------NRVKELFVSMESMG-------CKHD------- 296
                   TG +                N +K+  V  E +        CK         
Sbjct: 702 IGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQ 761

Query: 297 ------------DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
                       D + + +I  YCK  + +  L     +      P+  +Y  + HGL  
Sbjct: 762 LTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRN 821

Query: 345 IRQAERALKLFVEM 358
             + + A KL  ++
Sbjct: 822 EGRVQEAQKLVSDL 835



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 112/299 (37%), Gaps = 84/299 (28%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN  L  L K+   +   ++  ++   GL P + T++ILI   C+ G+ +L   +  R+
Sbjct: 547 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 606

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            ++  +PNV T+T +I GLC   R+ EA  +   + +FG  PN  TY  L+    + G  
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666

Query: 133 IVALNLFKEMT-NG---------------------------------------------- 145
             A  +   M  NG                                              
Sbjct: 667 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 726

Query: 146 --NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-------------------- 183
             + EI     P    Y+ ++ GLCKEG + +A +L   M                    
Sbjct: 727 CLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCK 786

Query: 184 --KYEN------------LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNV 227
             KY+N              P+  +Y  +IHG  +     EA+ L+ ++V   G++  V
Sbjct: 787 TCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 845


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 184/371 (49%), Gaps = 7/371 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N L+  + K   +     L   +   G+ P++ +YS +I+C   MG V L   +
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FGR+      PNV TFTSLIKG     R+ +A  L+  +   G  PNV+ YNTLI+GLC 
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A++++ +M   +       +PN  TYS II G  K G +  A E + +M     
Sbjct: 362 DGNMDEAISVWNQMEKDS------IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGC 415

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNVV YT ++   C  + +++A  L+  M+  G  P V++ N  +  LC+ G+++ A  
Sbjct: 416 RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMN 475

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +LD M + +  PN  TYN L+DG            L   +E    + D  +YN ++ G+ 
Sbjct: 476 VLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFS 535

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN-DVAADT 367
            N   ++ L L  ++   GIK   +T NT  +   ++ + + A+K+   +    +  AD 
Sbjct: 536 FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADI 595

Query: 368 CTYRTFIDGLC 378
            T+   + G+C
Sbjct: 596 ITHTIILWGIC 606



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 195/405 (48%), Gaps = 34/405 (8%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N+LL  L +N   D    L   +++ G  PD  +Y+ +I+  CK+G V      
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA--- 233

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             R L   F P V  + +LI G+C E R  EA  L  ++   G +PNVI+Y+T+I+ L  
Sbjct: 234 --RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSD 291

Query: 129 TGHTIVALNLFKEM-TNG-----------------NGEIGVVF-----------KPNTVT 159
            G+  ++L +F  M   G                  G +G               PN V 
Sbjct: 292 MGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVA 351

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+ +I GLC +G +D+A  ++ QM+ +++ PNV TY+++I+GF  + D   A     +M+
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G +PNVV    +++ LC+    D A  L+D M+     P   T+N  + G C  G++ 
Sbjct: 412 NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               +   ME   C  +  +YN L++G  +     EA  L  EL  + ++   VTYNT+ 
Sbjct: 472 WAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIM 531

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           +G       ++ L+L  +M  N +  DT T  T ++  C   +V+
Sbjct: 532 YGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 188/369 (50%), Gaps = 11/369 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N++L  L     +  + +L+  + S GL P+++TY++L+   C+ G+V     +
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL 201

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+ V++T++I  +C    + +A  L  K      EP V  YN LI+G+C+
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF-----EPVVPVYNALIHGVCK 256

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L  EM +     GV   PN ++YS +I  L   G V+ +  +F +M     
Sbjct: 257 ECRFKEAFDLMNEMVDR----GV--DPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGC 310

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV T+TSLI GF       +A GL   M+ +GV PNVV+ N +++ LC +G MD A  
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           + + M +  +RPN  TY+T++ GF  +G +    E +  M + GC+ +   Y  +++  C
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           +    ++A  L + +   G  PTV+T+N    GL    + E A+ +  +M+  +   +  
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490

Query: 369 TYRTFIDGL 377
           TY   +DGL
Sbjct: 491 TYNELLDGL 499



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)

Query: 128 RTGHTIVA-LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           R  H IV+ L  FK ++N        FK   +TY  +ID L +   +D    L  QMK E
Sbjct: 49  RQEHDIVSSLEYFKSLSNSG-----TFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           N+  +   +  +I  +  +N   +   +   + + G +P+V   N++++ L         
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS------- 299
           + L + M    + PN FTYN L+   C  GK++   +L V M + GC  DD S       
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 300 -----------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
                                  YN LI+G CK    +EA  L NE+  +G+ P V++Y+
Sbjct: 224 MCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYS 283

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           T+   L ++   E +L +F  M       +  T+ + I G  VR +V
Sbjct: 284 TVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRV 330



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 5/195 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V +FN  +  L +    +  +++  ++      P++ TY+ L++   +         
Sbjct: 451 PPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACG 510

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +       + VT+ +++ G        +   L  K+   G + + IT NT +N  C
Sbjct: 511 LIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYC 570

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A+ +   ++         F+ + +T++II+ G+C     ++A     +M    
Sbjct: 571 KLGKVKTAIKVLDNISAEKE-----FRADIITHTIILWGICNWLGTEEAVVYLHEMLKRG 625

Query: 188 LNPNVVTYTSLIHGF 202
           + PN+ T+  L+ GF
Sbjct: 626 IFPNIATWNVLVRGF 640


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L    K K++ +V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + +   G +P+V TY+ LIN
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM  GNG +     PN VT++ +IDG CK G +D A E + +M 
Sbjct: 215 GLCKESKMNDANELFDEMI-GNGLV-----PNGVTFTTLIDGHCKTGSIDLAMEAYKEML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  +P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 RQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +    M++ ++R +   Y  L+ G C  G+    +++   M S+G K D+ +Y ++I
Sbjct: 329 TAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V+    L  E+   G  P VVT
Sbjct: 389 NEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 6/304 (1%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K+      +  +  IL   +  ++  F  L+   C E  +  A ++F ++  +G  P+
Sbjct: 111 FMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPS 170

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V+++NTL+NG  R G       L K   +G+G      +P+  TYS++I+GLCKE  ++ 
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRL-KSAMHGSG-----IQPDVYTYSVLINGLCKESKMND 224

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A ELF +M    L PN VT+T+LI G C     + A     EM+ QG  P++++ N ++ 
Sbjct: 225 ANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIY 284

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCK G +  A  L+D M    ++P+  TY TL+DG C  G +    +    M     + 
Sbjct: 285 GLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRL 344

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           DD +Y  LI+G C+  +   A  +  E+   G+KP   TY  + +   +    +   KL 
Sbjct: 345 DDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLL 404

Query: 356 VEMQ 359
            EMQ
Sbjct: 405 KEMQ 408



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 121/223 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F ++    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G+QP+V + +V++N LCK  KM++A+ L D M+   + PN  T+ TL+DG C TG I+
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSID 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E +  M   G   D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            G  +    E A K    M   ++  D   Y   I GLC   Q
Sbjct: 319 DGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQ 361



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      F       F     T   +++              +
Sbjct: 65  DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F E+T          +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  N+A  L  EM+  G+ 
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CK G +D A      M++    P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL  
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCR 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             Q+  A K+  EM    +  D  TY   I+  C +  V+
Sbjct: 359 EGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVK 398



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 2/195 (1%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +  E+   G++P+VVS N +MN   + G +D   RL   M    
Sbjct: 142 LMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           ++P+ +TY+ L++G C   K+N   ELF  M   G   +  ++  LI+G+CK   ++ A+
Sbjct: 202 IQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             Y E+  +G  P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVR--FTYARR 390
           C    +   F Y +R
Sbjct: 322 CKEGDLETAFKYKKR 336


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 185/366 (50%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           ++ LL CLAK         +++R+ + G       Y  ++N  CK G V    +   ++L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 132
           R  F  +    TSL+   C    + EA  +F K+ K   C PN +TY+ LI+GLC  G  
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  L +EM     E G   +P+T TY+++I   C  G  DKA ++  +M  +   PNV
Sbjct: 259 EEAFQLKQEMV----EKGC--QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 312

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            TYT LI   C      EA G+  +M+  G+ P +++ N ++N  CK G + +A +LL +
Sbjct: 313 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 372

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M + + +PN  TYN LM+G C   K  +   L   +   G   D  +YNIL++G+CK  +
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 432

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           +  A +++N +   G++P   T+  L  GL ++ + E+A  +   M    ++ D  T+  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 373 FIDGLC 378
            IDG C
Sbjct: 493 LIDGHC 498



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 191/403 (47%), Gaps = 41/403 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+         D  + +   + +    P+++TY+ILI+  C+ G++     +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++L+    P ++TF +LI G C E  +V A  L + ++   C+PN+ TYN L+ GLCR
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
              +  A  L + + + NG +     P+ VTY+I++DG CKEG ++ A  +F  M    L
Sbjct: 395 VSKSYKAFLLLRRVVD-NGLL-----PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 448

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG------- 241
            P+  T+T+LI G C      +A G+L  MV +G+  + V+   +++  CK G       
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508

Query: 242 ----------------------------KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                                       K++ A+ +L  M++  + P+  T+  L++G C
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+     ++   M+  GC  + ++Y I+ING C N  VEEA ++   +   G+ P   
Sbjct: 569 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 628

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           TY  L     +  + +RA ++   M  N    ++  Y   + G
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 6/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++IL+  L +    +    L + +   G  P   TY++LI   C +G       +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PNV T+T LI  LC E +I EA  +F K+   G  P +IT+N LING C+
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M  GN       KPN  TY+ +++GLC+     KA  L  ++    L
Sbjct: 360 EGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTY  L+ GFC     N A  +   M   G++P+  +   +++ LCK G+++ A+ 
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  MV+  +  +  T+  L+DG C  GK   V  LF +M    C     ++N  ++   
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ ++ EA ++  ++   G+ P+VVT+  L  G     +   +LK+   M+    + +  
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593

Query: 369 TYRTFIDGLC 378
           TY   I+GLC
Sbjct: 594 TYTIIINGLC 603



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 11/378 (2%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P + ++N L+  L + +K Y   L L +R+   GL PD  TY+IL++ FCK GQ+++ F 
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  +  +   P+  TFT+LI GLC   R+ +A  +   +   G   + +T+  LI+G C
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 498

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G       LF+ M                T++  +D L K+  +++A  +  +M    
Sbjct: 499 KIGKAKDVCFLFENMVENR------CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+VVT+T LI G C A +   +  +L  M   G  PNV +  +I+N LC NG+++ A 
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L  M    V PN FTY  L+      G+++R  ++  +M   GC+ +   Y+ L++G+
Sbjct: 613 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672

Query: 308 CKNKEV--EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
             +       ALS   +L  + +       N L   +F +   + ALK+  E++   V  
Sbjct: 673 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPT 732

Query: 366 DTCTYRTFIDGLCVRPQV 383
           +   Y   + GLC   ++
Sbjct: 733 ED-LYNFLVVGLCKEGRI 749



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 157/341 (46%), Gaps = 14/341 (4%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P + +FN L+    K     +   L   +      P++ TY+ L+   C++ +   
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F++  R++ +   P+ VT+  L+ G C E ++  A  +F  + + G EP+  T+  LI+
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKP----NTVTYSIIIDGLCKEGFVDKAKELF 180
           GLC+ G           +   NG +G + K     + VT++ +IDG CK G       LF
Sbjct: 461 GLCKLGR----------LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
             M          T+   +         NEA  +L +M+  G+ P+VV+  +++   C+ 
Sbjct: 511 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 570

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+   + ++L+ M Q    PN +TY  +++G C  G++   + +  SM S G   + F+Y
Sbjct: 571 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTY 630

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            +L+  + K   ++ A  + + +   G +P    Y+ L  G
Sbjct: 631 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 146/342 (42%), Gaps = 46/342 (13%)

Query: 49  YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF---T 105
           YS L+ C  K+    + F+++ R++   F    + + +++  LC ++  V+AA +F    
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALC-KNGFVQAAEMFCCKV 197

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
               FG + +V T   L N  CR      A  +F++M+                      
Sbjct: 198 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMS---------------------- 233

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
                             K EN  PN VTY+ LIHG C A    EA  L  EMV++G QP
Sbjct: 234 ------------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 275

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +  +  V++   C  G  D A ++LD M      PN  TY  L+D  C  GKI     +F
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             M   G      ++N LINGYCK   V  A  L + +     KP + TYN L  GL  +
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
            ++ +A  L   +  N +  D  TY   +DG C   Q+   +
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 78/421 (18%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++NIL+    K    +   ++F  +NS GL PD +T++ LI+  CK+G++     I
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 474

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
            G +++   + + VTFT+LI G C                                    
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + ++ EA A+  K+  +G  P+V+T+  LI G CR G T ++L + + M           
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG------C 588

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            PN  TY+III+GLC  G V++A+ +   M    ++PN  TY  L+     A   + A  
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 648

Query: 214 LLIEMVDQGVQPN-----------VVSSNVI-MNELCKNGKMDNAS-------------- 247
           ++  MV  G QPN           V+S+  I    L   G +D  S              
Sbjct: 649 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 708

Query: 248 --RLLDLMVQCDVR--------PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
             RL+D+     +R        P    YN L+ G C  G+I    +L   M   G    D
Sbjct: 709 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL-FPD 767

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            + + +I  YCK  + +  L     +      P+  +Y  + HGL    + + A KL  +
Sbjct: 768 KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 827

Query: 358 M 358
           +
Sbjct: 828 L 828



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 68/309 (22%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN  L  L K+   +   ++  ++   GL P + T++ILI   C+ G+ +L   +  R+
Sbjct: 524 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 583

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG--------------------- 111
            ++  +PNV T+T +I GLC   R+ EA  +   + +FG                     
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643

Query: 112 --------------CEPNVITYNTLING------------LCRTGHTIVALNLFKEMTNG 145
                         C+PN   Y+ L++G            L  TG  + A +L  E  + 
Sbjct: 644 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG-DLDARSLSSEENDN 702

Query: 146 NGEIGVVFK-------------------PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           N     VF+                   P    Y+ ++ GLCKEG + +A +L   M   
Sbjct: 703 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 762

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L P+    +S+I  +C    ++     +  ++D    P+  S   +++ L   G++  A
Sbjct: 763 GLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821

Query: 247 SRLLDLMVQ 255
            +L+  +V+
Sbjct: 822 QKLVSDLVR 830


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P  V+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDYANELFNEMLD-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ V+   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P  V++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A+ L + M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  VTY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   +A ++F  +T          +P  V+++ +++G  + 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWG------LRPTAVSFNTLMNGYIRL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M+   + P+V TY+ LI+G C  +  + A  L  EM+D G+ PN V+ 
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   +   A+ +   +   G++P  VS N +MN   + G +D   RL + M    
Sbjct: 142 LMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   + ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK G++  A  + D + +  +RP A ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  +++ A  L+NE+   G+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 9/348 (2%)

Query: 47  YTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
           Y+Y+ILI   C+   V    V+   ++    + N+ T+T LIKGLC E RI +A  L  +
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDG 166
           +   G  P+V TYN +I+G C++G    AL + K +   NG       P+  TY+ +I G
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDWTYNSLIYG 363

Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN 226
           LC  G +D+A+EL          P V+T+T+LI+G+C A   ++A  +   M+    + +
Sbjct: 364 LCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422

Query: 227 VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFV 286
           + +  V++N L K  ++  A   L+ M    + PN  TY +++DG+C  G +    E+F 
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            ME  GC  + ++Y  LI G  ++K++ +A++L  ++   GI P V+TY TL  G  +  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCV--RPQVRFTYARRKG 392
           + + A +LF  M+ N +  D   Y    D LC   R +  +++  RKG
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKG 590



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 190/429 (44%), Gaps = 62/429 (14%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++ +L+  L K         L   +   G+ P ++TY+ +I+ +CK G++     I  
Sbjct: 284 LHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKA 343

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            + ++   P+  T+ SLI GLC   ++ EA  L     A G  P VIT+  LING C+  
Sbjct: 344 LMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402

Query: 131 HTIVALNLFKEMTNGNGE---------IGVVFK--------------------PNTVTYS 161
               AL +   M + N +         I V+ K                    PN VTY+
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYT 462

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            IIDG CK G V  A E+F  M++E  +PN  TY SLI+G       ++A  L+ +M + 
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G+ P V++   ++   CK  + DNA RL ++M Q  + P+   YN L D  C +G+    
Sbjct: 523 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582

Query: 282 KELFV--------------------------------SMESMGCKHDDFSYNILINGYCK 309
               V                                 M + GCK D ++Y++L+   CK
Sbjct: 583 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            K++ EALS+ +++   G+K  +V Y  +   + +  + + A  LF EM  +       T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702

Query: 370 YRTFIDGLC 378
           Y  FI   C
Sbjct: 703 YTVFISSYC 711



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 177/360 (49%), Gaps = 9/360 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++ +L+  L K             + + GL P++ TY+ +I+ +CK+G V     +F 
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      PN  T+ SLI GL  + ++ +A AL TK++  G  P VITY TLI G C+  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF EM   NG       P+   Y+++ D LCK G   +A+E +  +  + +  
Sbjct: 543 EFDNAFRLF-EMMEQNG-----LTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVL 593

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
             VTYTSL+ GF  A + + A  L+ +MV++G + ++ + +V++  LCK  K++ A  +L
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           D M    V+ N   Y  ++      GK +  K LF  M S G K    +Y + I+ YCK 
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI 713

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             +EEA  L  E+   G+ P VVTYN   +G   +   +RA      M       +  TY
Sbjct: 714 GRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTY 773



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 179/431 (41%), Gaps = 66/431 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  L+    K   +D    LF+ +   GL PD   Y++L +  CK G+    +  
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++R       VT+TSL+ G         AA L  K+   GC+ ++ TY+ L+  LC+
Sbjct: 586 ---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 AL++  +MT          K N V Y+III  + KEG  D AK LF +M     
Sbjct: 643 QKKLNEALSILDQMTVSG------VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  TYT  I  +C      EA+ L+ EM   GV P+VV+ N+ +N     G +D A  
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 249 LLDLMVQCDVRPNAFTY------------------------------------------- 265
            L  MV     PN +TY                                           
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 266 --------NTLMDGFCLTGKINRVKELFVSMESMGCKH---DDFSYNILINGYCKNKEVE 314
                   ++++ GFC   K  R++E  V ++ M  K    ++  Y +LI   C  K   
Sbjct: 817 LNPTVVTYSSIIAGFC---KATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFG 873

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A+S   ++   G +P + +Y+ L  GL +    +RA  LF ++ G D   +   ++   
Sbjct: 874 KAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILN 933

Query: 375 DGLCVRPQVRF 385
           DGL     V F
Sbjct: 934 DGLLKAGHVDF 944



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 165/381 (43%), Gaps = 22/381 (5%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++  L+   +K  + D    L +++ + G   DLYTYS+L+   CK  +++    I  ++
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S    N+V +T +I  +  E +   A +LF ++ + G +P+  TY   I+  C+ G  
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRI 716

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L  EM       GV   P+ VTY+I I+G    G++D+A     +M   +  PN 
Sbjct: 717 EEAEHLIGEMERD----GVT--PDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNC 770

Query: 193 VTYTSLIHGF-------CHAND----WNEAK-----GLLIEMVDQGVQPNVVSSNVIMNE 236
            TY  L+  F        H  D    WN  +      LL  M+  G+ P VV+ + I+  
Sbjct: 771 WTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAG 830

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK  +++ A  LLD M+  D+ PN   Y  L+   C      +       M   G +  
Sbjct: 831 FCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQ 890

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
             SY+ LI G C   + + A SL+ +L         V +  L  GL +    +   +L  
Sbjct: 891 LESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLA 950

Query: 357 EMQGNDVAADTCTYRTFIDGL 377
            M       D+ +Y    D +
Sbjct: 951 AMDNRHCRIDSESYSMLTDSI 971



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 14/307 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++ I++  + K   +D   SLF  + S G  P   TY++ I+ +CK+G++     + G
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR-- 128
            + R    P+VVT+   I G      I  A +   ++    CEPN  TY  L+    +  
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 129 --TGHTI--------VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
               H +        + LN+  ++     + G+   P  VTYS II G CK   +++A  
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGL--NPTVVTYSSIIAGFCKATRLEEACV 842

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M  ++++PN   YT LI   C    + +A   + +M++ G QP + S + ++  LC
Sbjct: 843 LLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLC 902

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
             G  D A  L   ++  D   N   +  L DG    G ++   +L  +M++  C+ D  
Sbjct: 903 DEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSE 962

Query: 299 SYNILIN 305
           SY++L +
Sbjct: 963 SYSMLTD 969



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 101/219 (46%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y++ +  L +    +   +L+  +  E L P+ VTY ++I  +C       A      + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G+Q +  + N ++   C+   +  A  LL +M     R N ++Y  L+ G C    + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               L   M   GC  +  +Y +LI G CK   + +A  L +E+P +G+ P+V TYN + 
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +  + + AL +   M+ N    D  TY + I GLC
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC 365



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 96/188 (51%)

Query: 155 PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL 214
           P+TVTY+ +I   CK+G +  A   F  ++   +  +  T  +L+ G+C  +D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
           L+ M   G + N  S  +++  LC+   +  A  L+ +MV      N  TY  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G+I+  + L   M   G     ++YN +I+GYCK+  +++AL +   +   G  P   T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 335 YNTLFHGL 342
           YN+L +GL
Sbjct: 357 YNSLIYGL 364


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 189/392 (48%), Gaps = 28/392 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV------ 62
           P  S FN L+      K Y     L  R+ + G  P    Y+I I   C   ++      
Sbjct: 344 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 403

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            L   I+G +L +    N V   +  + LC   +  +A  L  ++   G  P+  TY+ +
Sbjct: 404 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 463

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I  LC       A  LF+EM      +GV   P+  TY+I+ID  CK G +++A+ LF +
Sbjct: 464 ITFLCHATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKAGLIEQAQWLFEE 517

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           M+    +P VVTYT+LIH +  A    +A  +   MVD G +PN V+   +++ LCK G 
Sbjct: 518 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 577

Query: 243 MDNA----SRLL--------DLMVQCDVR----PNAFTYNTLMDGFCLTGKINRVKELFV 286
           +  A    ++L+        D    C+ R    PN  TY  L+DG C   K++   EL  
Sbjct: 578 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 637

Query: 287 SMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           +M S GC+ +   Y+ LI+G+CK  +++ A  ++ ++   G  P+V TY +L   +F+  
Sbjct: 638 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 697

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           + + A+K+  +M  +    +  TY   IDGLC
Sbjct: 698 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 162/308 (52%), Gaps = 10/308 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  S+++ ++  L      +    LF+ +  +G+ PD+YTY+ILI+ FCK G +     +
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     +P VVT+T+LI       ++ +A  +F ++   GC PN +TY  L++GLC+
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574

Query: 129 TGHTIVALNLFKEM--TNGNGEIGVVF--------KPNTVTYSIIIDGLCKEGFVDKAKE 178
            G+   A  ++ ++  T+ + +    F         PN VTY  ++DGLCK   VD A E
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      PN + Y +LI GFC A   + A+ + ++M   G  P+V +   +++ + 
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K+G++D A ++L  M++    PN  TY  ++DG C  G+  +  +L   ME  GC  +  
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 754

Query: 299 SYNILING 306
           +Y  LI+G
Sbjct: 755 TYTALIDG 762



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 28/392 (7%)

Query: 8   PPPVSSFNILLGCLAKNKHY------DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           PP    +NI +G +   +        D    ++  + +     +    +    C C +G+
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 437

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
               F +   ++R  F P+  T++ +I  LC  +++ +A  LF ++K  G  P+V TY  
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+  C+ G    A  LF+EM +      V   P  VTY+ +I    K   V +A ++F 
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG----------------VQP 225
           +M      PN VTY +L+ G C A + ++A  +  +++                   + P
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           NVV+   +++ LCK  K+D+A  LLD M+     PN   Y+ L+DGFC  GKI+  +E+F
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
           + M   G      +Y  LI+   K+  ++ A+ + +++      P VVTY  +  GL  I
Sbjct: 672 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 731

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            ++E+ALKL   M+    + +  TY   IDGL
Sbjct: 732 GESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 181/428 (42%), Gaps = 58/428 (13%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L+     D    + K ++  G   D +T     +  CK G+ +    +
Sbjct: 207 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 266

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              I R  F  + V  T +I GL   S   EA +   +++   C PNV+TY TL++G  +
Sbjct: 267 ---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 323

Query: 129 T---GHTIVALNLFKEMTNG-----------------NGEIGVVFK-----------PNT 157
               G     +N+   MT G                   +    +K           P  
Sbjct: 324 KKQLGWCKRIINMM--MTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381

Query: 158 VTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           V Y+I I  +C +        +D A++++ +M   N   N V   +     C    +++A
Sbjct: 382 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             L+ EM+ +G  P+  + + ++  LC   K++ A  L   M    V P+ +TY  L+D 
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 501

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           FC  G I + + LF  M S+GC     +Y  LI+ Y K K+V +A  +++ +   G +P 
Sbjct: 502 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 561

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT----------------CTYRTFID 375
            VTY  L  GL +     +A +++ ++ G   +AD+                 TY   +D
Sbjct: 562 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 621

Query: 376 GLCVRPQV 383
           GLC   +V
Sbjct: 622 GLCKAHKV 629



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 152/376 (40%), Gaps = 15/376 (3%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            N+L+    +   ++  L    RL   G  P   TY+ L+      GQV LGF +   + 
Sbjct: 177 LNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            S F  +  T       LC E R  +A  +  + + F  +  + T+  +I+GL    +  
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIER-EDFKLDTVLCTH--MISGLMEASYFD 293

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A++    M   N  I     PN VTY  ++ G  K+  +   K +   M  E  NPN  
Sbjct: 294 EAMSFLHRM-RCNSCI-----PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 347

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM------DNAS 247
            + SL+H +C+  D+  A  LL  M   G  P  V  N+ +  +C   K+      D A 
Sbjct: 348 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 407

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++   M+  +   N           C  GK ++  +L   M   G   D  +Y+ +I   
Sbjct: 408 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 467

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +VE+A  L+ E+   G+ P V TY  L     +    E+A  LF EM+    +   
Sbjct: 468 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 527

Query: 368 CTYRTFIDGLCVRPQV 383
            TY   I       QV
Sbjct: 528 VTYTALIHAYLKAKQV 543



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 6/163 (3%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P V ++  L+  L K    D    L   + S G  P+   Y  LI+ FCK G++  
Sbjct: 607 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 666

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F ++ +  + P+V T+TSLI  +  + R+  A  + +++    C PNV+TY  +I+
Sbjct: 667 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 726

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           GLCR G +  AL L   M     E G    PN VTY+ +IDGL
Sbjct: 727 GLCRIGESEKALKLLSLME----EKGC--SPNVVTYTALIDGL 763



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 11/205 (5%)

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
            E  V +      Y  + D L  +G    A+ L  ++  E+          L+   C   
Sbjct: 129 AERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGG 188

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            WNEA   L  + D G +P+ V+ N ++  L   G++D   R+   M +     + FT  
Sbjct: 189 MWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG 248

Query: 267 TLMDGFCLTGK----INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
                 C  G+    ++ ++     ++++ C H       +I+G  +    +EA+S  + 
Sbjct: 249 CFAHALCKEGRWADALDMIEREDFKLDTVLCTH-------MISGLMEASYFDEAMSFLHR 301

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQ 347
           +      P VVTY TL  G  + +Q
Sbjct: 302 MRCNSCIPNVVTYRTLLSGFLKKKQ 326


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 177/333 (53%), Gaps = 6/333 (1%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           PDL TY+ LIN FC  G+V     +  + +R   APN +T+T L+ G C +    +A   
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
             ++   G E ++I+Y  LI+GL   G    AL +   M N     G++  P+   Y+++
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR----GIL--PDANIYNVL 459

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
           ++GL K+G +  AK +  +M  +N+ P+   Y +L+ GF    + +EAK L   ++++G+
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGL 519

Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
            P VV  NV++    K+G MDNA   +D M +    P+ FT++T++DG+     +N V +
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579

Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           +F  M    CK +  +Y  LINGYC+  E + A  L++ +   G+KP+VVTY+ L     
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639

Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +  +  +A+  F  M  N    +   +   ++G
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNG 672



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 195/407 (47%), Gaps = 35/407 (8%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFK----RLNSIGLFPDLYTYSILINCFCKM 59
           +H S P   + N LL  L K++  +T   L+     R N   +  D YT SI++   C  
Sbjct: 162 LHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLK 221

Query: 60  GQVSLGF-VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
           G++  G  +I  R  + C  PN+V + +LI G C +  +  A  LF KLK  G  P + T
Sbjct: 222 GRIEDGIKLIESRWGKGC-VPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQT 280

Query: 119 YNTLINGLCRTGH---------------TIVALNLFKEMTNGNGEIGVVFK--------- 154
           + +L+NG C+ G                  V + ++  + +   ++G   K         
Sbjct: 281 FGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMS 340

Query: 155 -----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                P+ VTY+ +I+  C  G V++A++L  Q     L PN +TYT L+HG+C   ++ 
Sbjct: 341 ENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYT 400

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A   LIEM   G++ +++S   +++ L   G++D A  + D M+   + P+A  YN LM
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           +G    GK++  K +   M       D F Y  L++G+ ++  ++EA  L+  +  KG+ 
Sbjct: 461 NGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD 520

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           P VV YN +  G  +    + A+    +M+      D  T+ T IDG
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDG 567



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 11/389 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+    K    ++   LFK+L   G  P L T+  L+N FCKMG      ++
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     + NV  + ++I         ++A     ++    CEP+++TYNTLIN  C 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L ++       I     PN +TY+ ++ G CK+G   KA +  ++M    L
Sbjct: 361 RGEVEEAEKLLEQT------IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             ++++Y +LIHG   A + + A  +   M+++G+ P+    NV+MN L K GK+  A  
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L  M+  ++ P+AF Y TL+DGF   G ++  K+LF  +   G       YN++I G+ 
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+  ++ A+   +++      P + T++T+  G  +       LK+F  M   +   +  
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKG 392
           TY + I+G C + + +     F+  R  G
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHG 623



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 20/282 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    +  L+    ++ + D    LF+ +   GL P +  Y+++I  F K G +    + 
Sbjct: 486 PDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILC 545

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++ R+   P++ TF+++I G   +  +     +F  +    C+PNV+TY +LING CR
Sbjct: 546 IDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCR 605

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G T +A  LF  M +         KP+ VTYSI+I   CKE  + KA   F  M     
Sbjct: 606 KGETKMAEKLFSMMRSHG------LKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKC 659

Query: 189 NPNVVTYTSLIHGFC--------------HANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
            PN   +  L++GF               H N  +  +     M+  G      + N I+
Sbjct: 660 TPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCIL 719

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
             LC+   +  A +L + M+   +  +A ++  L+ G CL G
Sbjct: 720 ICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEG 761



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 4/271 (1%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
           P+    N+L+N L +      A  L+ EM +  NG+   V   +  T SI++ GLC +G 
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICV---DNYTTSIMVKGLCLKGR 223

Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
           ++   +L      +   PN+V Y +LI G+C   +   A  L  ++  +G  P + +   
Sbjct: 224 IEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGS 283

Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++N  CK G  +    LL  M    +  N   YN ++D     G   + K+    M    
Sbjct: 284 LVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC 343

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           C+ D  +YN LIN +C   EVEEA  L  +   +G+ P  +TY  L HG  +  +  +A 
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              +EM  + +  D  +Y   I GL V  +V
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEV 434



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 43/296 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V  +N+++   +K+   D  +    ++      PD++T+S +I+ + K   ++    I
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +++    PNVVT+TSLI G C +     A  LF+ +++ G +P+V+TY+ LI   C+
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640

Query: 129 TGHTIVALNLFKEM-------------------TNGNGE--------------------- 148
                 A++ F+ M                   TN                         
Sbjct: 641 EAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFF 700

Query: 149 ---IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
              IG  +      Y+ I+  LC++  V  A +L  +M    L  + V++ +LIHG C  
Sbjct: 701 SRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLE 760

Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            +  E + ++   +++G     +  ++ +++    G +  AS +L  M++  V PN
Sbjct: 761 GNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 166/333 (49%), Gaps = 6/333 (1%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L++   K+      +  +  IL + F  NV  F  L+   C E  I +A  +F ++    
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
             P V+++NTLING C+ G+  V   L   M           +P+  TYS +I+ LCKE 
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRT------RPDVFTYSALINALCKEN 324

Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
            +D A  LF +M    L PN V +T+LIHG       +  K    +M+ +G+QP++V  N
Sbjct: 325 KMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYN 384

Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
            ++N  CKNG +  A  ++D M++  +RP+  TY TL+DGFC  G ++   E+   M+  
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQN 444

Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
           G + D   ++ LI G CK   V +A     E+   G+KP  VTY  +     +   A+  
Sbjct: 445 GIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTG 504

Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            KL  EMQ +    +  TY   ++GLC   Q++
Sbjct: 505 FKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMK 537



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 9/370 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  V  FNIL+    K  +      +F  +    L P + +++ LIN +CK+G + +GF 
Sbjct: 237 PLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFR 296

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +S   P+V T+++LI  LC E+++  A  LF ++   G  PN + + TLI+G  
Sbjct: 297 LKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHS 356

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R G     ++L KE        G+  +P+ V Y+ +++G CK G +  A+ +   M    
Sbjct: 357 RNGQ----IDLMKESYQKMLSKGL--QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ VTYT+LI GFC   D + A  +  EM   G++ + V  + ++  +CK G++ +A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           R L  M++  ++P+  TY  +MD FC  G      +L   M+S G   +  +YN+L+NG 
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           CK  +++ A  L + +   G+ P  +TYNTL  G      A +  K   E+    + AD 
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEI---GIVADL 587

Query: 368 CTYRTFIDGL 377
            +Y++ ++ L
Sbjct: 588 ASYKSLVNEL 597



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 9/342 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V SFN L+    K  + D    L   +      PD++TYS LIN  CK  ++     +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRL 332

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN V FT+LI G     +I      + K+ + G +P+++ YNTL+NG C+
Sbjct: 333 FYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A N+       +G I    +P+ VTY+ +IDG C+ G VD A E+  +M    +
Sbjct: 393 NGDLVAARNIV------DGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGI 446

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + V +++LI G C      +A+  L EM+  G++P+ V+  ++M+  CK G      +
Sbjct: 447 ELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFK 506

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M      PN  TYN L++G C  G++     L  +M ++G   DD +YN L+ G+ 
Sbjct: 507 LLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHH 566

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
           ++    +    Y + P  GI   + +Y +L + L+   +  R
Sbjct: 567 RHANASKH---YKQKPEIGIVADLASYKSLVNELYRASKDHR 605



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%)

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           GF+    + F   +  N    +    +L+      N      G  +E++D G   NV   
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           N++MN+ CK G + +A ++ D + +  +RP   ++NTL++G+C  G ++    L   ME 
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
              + D F+Y+ LIN  CK  +++ A  L+ E+  +G+ P  V + TL HG     Q + 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDL 363

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             + + +M    +  D   Y T ++G C
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFC 391


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N LL C  + K    V  + + + + G+   + TY+IL++       +S    +F  + 
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +    +V  +T++I   C    +  AA +  +    G EPN  TY  LING C+ G   
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L  +M  G G +G+    N + ++ +IDG C++G VD A ++   M+   +  ++ 
Sbjct: 335 AAEMLLADM-QGQG-VGL----NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY +L  G C  N  +EAK LL  M++ GV PN V+   +++  CK+G M  A RL   M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    P+  TYN ++DG+   G I   +     ME  G   D ++Y  L++G+C N +V
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           + AL L+ E+  +G +P VV Y  L  GL +  ++E A +L+ +M    +  D   Y   
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSAL 568

Query: 374 IDGL 377
           +  L
Sbjct: 569 VGSL 572



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 163/332 (49%), Gaps = 6/332 (1%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++ IL+  L+  +    V +LF  + +  +  D+Y Y+ +IN +C+ G +     +  
Sbjct: 247 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 306

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
             + +   PN  T+  LI G C   ++  A  L   ++  G   N I +NT+I+G CR G
Sbjct: 307 ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 366

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL +   M     E+ +       TY+ +  GLC+   +D+AK L   M    + P
Sbjct: 367 MVDDALKIKAAMEKMGVELDI------YTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N VTYT+LI   C   D  EA+ L  EM ++G  P+VV+ NV+++   K G +  A R  
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFR 480

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
             M +    P+ +TY +L+ G C+ GK++   +LF  M+  G + +  +Y  LI+G  K 
Sbjct: 481 KEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKE 540

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
              E A  LY+++   G+ P    Y+ L   L
Sbjct: 541 GRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 52/365 (14%)

Query: 60  GQVSLGFVIFGRILRSCFAPNVVT---FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNV 116
           G+++    +  R L SC  P  V+    + ++ GLC   R+ +A  L   +   G   N 
Sbjct: 155 GRLADAAGLLERALGSC--PGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNA 212

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           + YN+L++   R         + + M N   E  V       TY+I++D L     + K 
Sbjct: 213 LCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG------TYTILVDSLSTARDISKV 266

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           + LF +MK  N+  +V  YT++I+ +C A +   A  +L E V  GV+PN  +  V++N 
Sbjct: 267 EALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLING 326

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
            CK G+M+ A  LL  M    V  N   +NT++DG+C  G ++   ++  +ME MG + D
Sbjct: 327 FCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELD 386

Query: 297 DFSYNILING-----------------------------------YCKNKEVEEALSLYN 321
            ++YN L  G                                   +CK+ ++ EA  L+ 
Sbjct: 387 IYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFR 446

Query: 322 ELPFKGIKPTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           E+  KG  P+VVTYN +  G  +   IR+AER  K   EM+      D  TY + + G C
Sbjct: 447 EMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK---EMEKKGFVPDVYTYASLVHGHC 503

Query: 379 VRPQV 383
           V  +V
Sbjct: 504 VNGKV 508



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           FN ++    +    D  L +   +  +G+  D+YTY+ L    C++ ++     +   ++
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
                PN VT+T+LI   C +  +VEA  LF ++   G  P+V+TYN +I+G  + G   
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A    KEM          F P+  TY+ ++ G C  G VD A +LF +MK     PNVV
Sbjct: 475 EAERFRKEMEKKG------FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 528

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            YT+LI G         A  L  +M+  G+ P+    + ++  L  + + D
Sbjct: 529 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 7/202 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N L   L +    D   +L   +  +G+ P+  TY+ LI+  CK G +     +F 
Sbjct: 387 IYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFR 446

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+VVT+  +I G   +  I EA     +++  G  P+V TY +L++G C  G
Sbjct: 447 EMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNG 506

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
              VAL LF+EM     E      PN V Y+ +I GL KEG  + A +L+  M    L P
Sbjct: 507 KVDVALKLFEEMKQRGTE------PNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIP 560

Query: 191 NVVTYTSLIHGFCHANDWNEAK 212
           +   Y++L+ G  H ++  + K
Sbjct: 561 DDSLYSALV-GSLHTDNRKDVK 581



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 40/217 (18%)

Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVS---SNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
           A    +A GLL   +  G  P  VS   ++V+++ LCK+G++D+A RLLD M +  V  N
Sbjct: 154 AGRLADAAGLLERAL--GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLN 211

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH-------------------------- 295
           A  YN+L+D +       RV+E+   ME+ G +                           
Sbjct: 212 ALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFN 271

Query: 296 ---------DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
                    D + Y  +IN YC+   +  A  + +E    G++P   TY  L +G  +I 
Sbjct: 272 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIG 331

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           Q E A  L  +MQG  V  +   + T IDG C +  V
Sbjct: 332 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 368



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++  L+    K+        LF+ +   G  P + TY+++I+ + K G +      
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +  F P+V T+ SL+ G C   ++  A  LF ++K  G EPNV+ Y  LI+GL +
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
            G +  A  L+ +M       G++  P+   YS ++  L
Sbjct: 540 EGRSEAAFQLYDDMLKA----GLI--PDDSLYSALVGSL 572


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 199/403 (49%), Gaps = 41/403 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ +L+  L      D   +LF  + + G  P+++TY++LI+  C+ G++     +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++++    P+V+T+ +LI G C + R+V A  L T ++   C+PNV T+N L+ GLCR
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A++L K M + NG       P+ V+Y+++IDGLC+EG ++ A +L   M   +L
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ +T+T++I+ FC     + A   L  M+ +G+  + V+   +++ +C  GK  +A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532

Query: 249 LLDLMVQ--------------------CDVR---------------PNAFTYNTLMDGFC 273
           +L+ +V+                    C ++               P+  TY TL+DG  
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +G I+    +   M+  GC  + + Y I+ING C+   VEEA  L + +   G+ P  V
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           TY  +  G     + +RAL+    M       +   Y + + G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRG 695



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 34  FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
           ++R+ + G    +  Y  ++N  CK G      +   +IL+  F  +    TSL+ G C 
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 94  ESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              + +A  +F  +   G C PN ++Y+ LI+GLC  G    A  L  +M    GE G  
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM----GEKGC- 297

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            +P+T TY+++I  LC  G +DKA  LF +M      PNV TYT LI G C      EA 
Sbjct: 298 -QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
           G+  +MV  G+ P+V++ N ++N  CK+G++  A  LL +M +   +PN  T+N LM+G 
Sbjct: 357 GVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK  +   L   M   G   D  SYN+LI+G C+   +  A  L   +    ++P  
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDC 476

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +T+  + +   +  +A+ A      M    ++ D  T  T IDG+C
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   S++IL+  L +    +    L  ++   G  P   TY++LI   C  G +   F +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++     PNV T+T LI GLC + +I EA  +  K+   G  P+VITYN LING C+
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G  + A  L   M           KPN  T++ +++GLC+ G   KA  L  +M    L
Sbjct: 384 DGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P++V+Y  LI G C     N A  LL  M    ++P+ ++   I+N  CK GK D AS 
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA 497

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR---VKELFVSMESMGCKHDDFSYNILIN 305
            L LM++  +  +  T  TL+DG C  GK      + E  V M  +   H   S N++++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH---SLNVILD 554

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
              K  +++E L++  ++   G+ P+VVTY TL  GL        + ++   M+ +    
Sbjct: 555 MLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLP 614

Query: 366 DTCTYRTFIDGLC 378
           +   Y   I+GLC
Sbjct: 615 NVYPYTIIINGLC 627



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 173/341 (50%), Gaps = 9/341 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +  ++  L KN + +       ++  +G   D +  + L+  FC+   +     +F  + 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 74  R--SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           R  +C APN V+++ LI GLC   R+ EA  L  ++   GC+P+  TY  LI  LC  G 
Sbjct: 258 REGTC-APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
              A NLF EM      I    KPN  TY+++IDGLC++G +++A  +  +M  + + P+
Sbjct: 317 IDKAFNLFDEM------IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           V+TY +LI+G+C       A  LL  M  +  +PNV + N +M  LC+ GK   A  LL 
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
            M+   + P+  +YN L+DG C  G +N   +L  SM S   + D  ++  +IN +CK  
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           + + A +    +  KGI    VT  TL  G+  + +   AL
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 19/337 (5%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           LI+CF ++ +VS GF    R+   C++  +++   L  G  A          + +++A G
Sbjct: 143 LISCFDELREVS-GF----RLNYPCYSSLLMSLAKLDLGFLA-------YVTYRRMEADG 190

Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEG 171
               +I Y T++N LC+ G+T  A     ++     ++G +   + VT  ++  G C+  
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL----KVGFLLDSHIVTSLLL--GFCRGL 244

Query: 172 FVDKAKELFLQMKYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
            +  A ++F  M  E    PN V+Y+ LIHG C      EA GL  +M ++G QP+  + 
Sbjct: 245 NLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            V++  LC  G +D A  L D M+    +PN  TY  L+DG C  GKI     +   M  
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G      +YN LINGYCK+  V  A  L   +  +  KP V T+N L  GL  + +  +
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           A+ L   M  N ++ D  +Y   IDGLC    +   Y
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAY 461



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 174/389 (44%), Gaps = 45/389 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S+N+L+  L +  H +    L   +NS  L PD  T++ +IN FCK G+  +    
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +LR   + + VT T+LI G+C   +  +A  +   L          + N +++ L +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSK 558

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                  L +  ++     ++G+V  P+ VTY+ ++DGL + G +  +  +   MK    
Sbjct: 559 GCKLKEELAMLGKIN----KLGLV--PSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGC 612

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PNV  YT +I+G C      EA+ LL  M D GV PN V+  V++     NGK+D A  
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR------VKELFVSMESMG---------- 292
            +  MV+     N   Y++L+ GF L+ K  R      +KEL   +E +G          
Sbjct: 673 TVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFL 732

Query: 293 ----CKHD-------------------DFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
               CK                     + + +I++  YC  K+  + + L   +   G  
Sbjct: 733 VTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFV 792

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           P+  ++  +  GL +    ERA +L +E+
Sbjct: 793 PSFKSFCLVIQGLKKEGDTERARELVMEL 821


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 191/356 (53%), Gaps = 9/356 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N LL  L  +      ++LF+     GL+ PD+++++++I   C+MG       +  R
Sbjct: 181 AYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVER 240

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLCRTG 130
           +     +P+ +T   L+ GLC   ++ +   +  +L+  G C PN +TY ++I+G C+ G
Sbjct: 241 MTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAG 300

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A++++ +M           +PNTVTY+++I+G  K   ++ A  ++ Q+   +  P
Sbjct: 301 KMEDAMSVYNDMLESGT------RPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPP 354

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +VVT++SLI G+C     ++AK +  EM    +QPNV + ++I++ LCK  +   A  +L
Sbjct: 355 DVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDIL 414

Query: 251 -DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            +L ++ D+ P  F YN ++D  C  GK++    +   M+  GC  D ++Y ILI G+C 
Sbjct: 415 RELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCM 474

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
              + EA++L++++   G +P  +T N+    + +        ++ +   G+ +A+
Sbjct: 475 KGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLAS 530



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 191/382 (50%), Gaps = 14/382 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           PP   S+  ++  L ++  +   L LF ++ +  G  P+   +S +       G +    
Sbjct: 105 PPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAAS 164

Query: 67  VIF--GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC-EPNVITYNTLI 123
            +   G  L  C  P    +  L+  L A  R  +A ALF      G   P+V ++N +I
Sbjct: 165 TLLTKGSRLGCCIEP--YAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVI 222

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G+CR G+   AL L + MT    E G    P+T+T++I++DGLC+   V+K  E+  ++
Sbjct: 223 KGVCRMGNFQKALELVERMT----EFGC--SPDTITHNILVDGLCRAKQVNKGHEVLRRL 276

Query: 184 KYENL-NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           + + +  PN VTYTS+I G+C A    +A  +  +M++ G +PN V+ NV++N   K   
Sbjct: 277 QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALD 336

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           M++A R+   ++     P+  T+++L+DG+C  G+++  K ++  M     + + ++++I
Sbjct: 337 MESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSI 396

Query: 303 LINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
           +I+  CK     EAL +  EL  +  I P    YN +   L +  + + A  +  +M+  
Sbjct: 397 IIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEK 456

Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
               D  TY   I G C++ ++
Sbjct: 457 GCHPDKYTYTILIIGHCMKGRI 478



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 13/371 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P    F+ + G        D   +L  + + +G   + Y Y+ L+N     G+      +
Sbjct: 142 PEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVAL 201

Query: 69  F-GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           F   I    ++P+V +F  +IKG+C      +A  L  ++  FGC P+ IT+N L++GLC
Sbjct: 202 FESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLC 261

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           R         + + +         V  PN VTY+ +I G CK G ++ A  ++  M    
Sbjct: 262 RAKQVNKGHEVLRRLQRDG-----VCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESG 316

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             PN VTY  LI+G+  A D   A  +  +++ +   P+VV+ + +++  C+ G++D+A 
Sbjct: 317 TRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAK 376

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD----DFSYNIL 303
           R+   M    ++PN +T++ ++   C   K NR  E    +  +  + D     F YN +
Sbjct: 377 RIWKEMGLHHIQPNVYTFSIIIHSLC---KQNRSAEALDILRELNMRTDIAPQTFIYNPV 433

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+  CK  +V+EA  +  ++  KG  P   TY  L  G     +   A+ LF +M     
Sbjct: 434 IDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGC 493

Query: 364 AADTCTYRTFI 374
             D  T  +F+
Sbjct: 494 RPDNITVNSFV 504



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 7/224 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N+L+    K    ++ + ++++L      PD+ T+S LI+ +C+ GQ+     I
Sbjct: 319 PNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRI 378

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-FGCEPNVITYNTLINGLC 127
           +  +      PNV TF+ +I  LC ++R  EA  +  +L       P    YN +I+ LC
Sbjct: 379 WKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILC 438

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  +  +M     E G    P+  TY+I+I G C +G + +A  LF +M    
Sbjct: 439 KGGKVDEANLIVTDMK----EKGC--HPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAG 492

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
             P+ +T  S +     A   NE   +++     G+    VSS 
Sbjct: 493 CRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLASQKVSSQ 536


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 191/384 (49%), Gaps = 17/384 (4%)

Query: 1   MRHM-HPSPPPVS-SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           + HM H    P+S +FN L+  L ++ ++D    +F  L S  +  D Y++ I+I   C+
Sbjct: 112 LHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCE 170

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G    GF +   +     +PNVV +T+LI G C    ++ A  LF K+   G  PN  T
Sbjct: 171 AGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHT 230

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y+ L+NG  + G       +++ M       G+V  PN   Y+ +I   C  G VDKA +
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNAYAYNCLISEYCNGGMVDKAFK 284

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F +M+ + +   V+TY  LI G C    + EA  L+ ++   G+ PN+V+ N+++N  C
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC----LTGKINRVKELFVSMESMGCK 294
             GKMD A RL + +    + P   TYNTL+ G+     L G ++ VKE    ME     
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE----MEERCIA 400

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
               +Y ILI+ + +    E+A  +++ +   G+ P V TY+ L HGL      + A KL
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL 460

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           F  +    +  ++  Y T I G C
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYC 484



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 7/382 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H  P       ++ ++     +   D  L+    +   G  P   T++ L+    +    
Sbjct: 81  HFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYF 140

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + IF   L+S    +  +F  +IKG C     V+   L   L+ FG  PNV+ Y TL
Sbjct: 141 DKAWWIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G+ ++A NLF +M      +G+V  PN  TYS++++G  K+G   +  +++  
Sbjct: 200 IDGCCKYGNVMLAKNLFCKMD----RLGLV--PNPHTYSVLMNGFFKQGLQREGFQMYEN 253

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK   + PN   Y  LI  +C+    ++A  +  EM ++G+   V++ N+++  LC+  K
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
              A +L+  + +  + PN  TYN L++GFC  GK++    LF  ++S G      +YN 
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI GY K + +  AL L  E+  + I P+ VTY  L      +   E+A ++   M+ + 
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSG 433

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           +  D  TY   I GLCV   ++
Sbjct: 434 LVPDVYTYSVLIHGLCVHGNMK 455



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 172/339 (50%), Gaps = 6/339 (1%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           LF +++ +GL P+ +TYS+L+N F K G    GF ++  + RS   PN   +  LI   C
Sbjct: 215 LFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYC 274

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
               + +A  +F +++  G    V+TYN LI GLCR      A+ L  ++        V 
Sbjct: 275 NGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK------VG 328

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
             PN VTY+I+I+G C  G +D A  LF Q+K   L+P +VTY +LI G+    +   A 
Sbjct: 329 LSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L+ EM ++ + P+ V+  ++++   +    + A  +  LM +  + P+ +TY+ L+ G 
Sbjct: 389 DLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGL 448

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C+ G +    +LF S+  M  + +   YN +I+GYCK      AL L NE+   G+ P V
Sbjct: 449 CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNV 508

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            ++ +    L    + + A  L  +M  + +      Y+
Sbjct: 509 ASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 6/327 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++++L+    K         +++ +   G+ P+ Y Y+ LI+ +C  G V   F +
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +     A  V+T+  LI GLC   +  EA  L  K+   G  PN++TYN LING C 
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ LF ++ +          P  VTY+ +I G  K   +  A +L  +M+   +
Sbjct: 346 VGKMDTAVRLFNQLKSSG------LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+ VTYT LI  F   N   +A  +   M   G+ P+V + +V+++ LC +G M  AS+
Sbjct: 400 APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASK 459

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L   + +  ++PN+  YNT++ G+C  G   R   L   M   G   +  S+   I   C
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLC 519

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTY 335
           ++++ +EA  L  ++   G+KP+V  Y
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 159/348 (45%), Gaps = 10/348 (2%)

Query: 32  SLFKRLNSIGLFPDL-YT--YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLI 88
           SL  +L      P L YT  Y  ++N +               ++     P   TF +L+
Sbjct: 72  SLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLM 131

Query: 89  KGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
             L   +   +A  +F +LK+     +  ++  +I G C  G+ +    L   +     E
Sbjct: 132 CLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE----E 186

Query: 149 IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
            G+   PN V Y+ +IDG CK G V  AK LF +M    L PN  TY+ L++GF      
Sbjct: 187 FGL--SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            E   +   M   G+ PN  + N +++E C  G +D A ++   M +  +     TYN L
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           + G C   K     +L   +  +G   +  +YNILING+C   +++ A+ L+N+L   G+
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            PT+VTYNTL  G  ++     AL L  EM+   +A    TY   ID 
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L + +++  V   +K +   G    LY ++IL+  FCK G++ L
Sbjct: 95  HKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +LI G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G    A  LF EM + NG +     PN VT++ +I G CK   VD A E++ QM 
Sbjct: 215 GLCKEGKLDEANELFNEMLD-NGLV-----PNGVTFTTLIHGHCKNEKVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L+P+++TY +LI+G C   +  +   L+ EM+  G++P+ +S   +++  CK G ++
Sbjct: 269 SQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + M+Q  +R +   Y  L+   C  G+ +  +++   M S+G K D+ +Y ++I
Sbjct: 329 IALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK ++ + A  L  E+   G  P VVT
Sbjct: 389 NEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 6/291 (2%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L   +  ++  F  L++  C E  +  A ++F  +  +G  P+V+++NTLING  +
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L   M     +      P+  TYSI+I+GLCKEG +D+A ELF +M    L
Sbjct: 184 LGDLDEGFRLKSAMHASGAQ------PDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VT+T+LIHG C     + A  +  +M+ QG+ P++++ N ++  LCK G++     
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   ++P+  +Y TL+DG C  G +    EL   M     + DD +Y  LI+  C
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +     +A  +  E+   G+KP   TY  + +   + R ++ A KL  EMQ
Sbjct: 358 REGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQ 408



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 6/262 (2%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N L+   C+ G   +A ++F  +T          +P+ V+++ +I+G  K G +D+   
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWG------LRPSVVSFNTLINGYIKLGDLDEGFR 192

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      P+V TY+ LI+G C     +EA  L  EM+D G+ PN V+   +++  C
Sbjct: 193 LKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHC 252

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KN K+D A  +   M+   + P+  TYNTL+ G C  G++ +V +L   M   G K D  
Sbjct: 253 KNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKI 312

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY  LI+G CK  ++E AL L N++  + I+   V Y  L   L    +A  A K+  EM
Sbjct: 313 SYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREM 372

Query: 359 QGNDVAADTCTYRTFIDGLCVR 380
               +  D  TY   I+  C +
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKK 394



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H   + P V +++IL+  L K    D    LF  +   GL P+  T++ LI+  CK  +V
Sbjct: 198 HASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKV 257

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            L   I+ ++L    +P+++T+ +LI GLC +  + +   L  ++   G +P+ I+Y TL
Sbjct: 258 DLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTL 317

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G   +AL L  +M      I    + + V Y+ +I  LC+EG    A+++  +
Sbjct: 318 IDGSCKEGDLEIALELRNKM------IQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           M    L P+  TYT +I+ FC   D   A  LL EM   G  P VV+
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 137/279 (49%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV--VF----------KPNTVTYSIIID 165
           +Y T+I+ LC     I A +L + + +  G+     VF          + +   +S ++ 
Sbjct: 15  SYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMI 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GFV  A + F   K   +     T   ++        +        E+++ G   
Sbjct: 75  AYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M   CK G+M  A  + D + +  +RP+  ++NTL++G+   G ++    L 
Sbjct: 135 SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y+ILING CK  +++EA  L+NE+   G+ P  VT+ TL HG  + 
Sbjct: 195 SAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC + +++
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 199/405 (49%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L + +   T++ L + + ++GL P++YTY+I I    + G++   + I
Sbjct: 225 PSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P+VVT+T LI  LCA  ++ +A  L+TK++A   +P+++TY TL++    
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGN 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G        + EM   +G     + P+ VTY+I+++ LCK G VD+A ++   M+   +
Sbjct: 345 YGDLETVKRFWSEM-EADG-----YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGI 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGL---------------------------------- 214
            PN+ TY +LI G  +    +EA  L                                  
Sbjct: 399 VPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALD 458

Query: 215 -LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
              +M  +G+ P++ + N  +  L + G++  A  + + +  C + P++ TYN +M  + 
Sbjct: 459 TFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYS 518

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+I++  +L   M S GC+ D    N LI+   K   V+EA  ++  L    + PTVV
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVV 578

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYN L  GL +  +  +AL LF  M+ +    +T T+   +D LC
Sbjct: 579 TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLC 623



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 24/364 (6%)

Query: 24  NKHYDTVLSLFK----------------RLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           N++ +T L++FK                ++   G   + Y+Y+ LI    + G       
Sbjct: 154 NRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           ++ R++     P++ T+++L+  L           L  +++  G  PN+ TY   I  L 
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273

Query: 128 RTGHTIVALNLFKEMTN-GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           R G    A  + K M + G G       P+ VTY+++ID LC  G +DKAKEL+ +M+  
Sbjct: 274 RAGRIDDAYGILKTMEDEGCG-------PDVVTYTVLIDALCAAGKLDKAKELYTKMRAS 326

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
           +  P++VTY +L+  F +  D    K    EM   G  P+VV+  +++  LCK+GK+D A
Sbjct: 327 SHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQA 386

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             +LD+M    + PN  TYNTL+ G     +++   ELF +MES+G     +SY + I+ 
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
           Y K  + E+AL  + ++  +GI P++   N   + L E+ +   A  +F ++    ++ D
Sbjct: 447 YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506

Query: 367 TCTY 370
           + TY
Sbjct: 507 SVTY 510



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 185/369 (50%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+         +TV   +  + + G  PD+ TY+IL+   CK G+V   F +
Sbjct: 330 PDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDM 389

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      PN+ T+ +LI GL    R+ EA  LF  +++ G  P   +Y   I+   +
Sbjct: 390 LDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGK 449

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    AL+ F++M    G +  +   N   YS     L + G + +AK++F  +    L
Sbjct: 450 LGDPEKALDTFEKMKK-RGIMPSIAACNASLYS-----LAEMGRIREAKDIFNDIHNCGL 503

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P+ VTY  ++  +  A   ++A  LL EM+ +G +P+++  N +++ L K G++D A +
Sbjct: 504 SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQ 563

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   +    + P   TYN L+ G    GK+ +  +LF SM+  GC  +  ++N L++  C
Sbjct: 564 MFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLC 623

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           KN  V+ AL ++  +      P V+TYNT+ +GL +  +A  A   + +M+   ++ D  
Sbjct: 624 KNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHV 682

Query: 369 TYRTFIDGL 377
           T  T + G+
Sbjct: 683 TLYTLLPGV 691



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 173/361 (47%), Gaps = 11/361 (3%)

Query: 18  LGCLAKNKHYDTVLSLFK---RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           +G L      ++ LS FK   +L +I   P+   Y  ++      G+V     +F  + +
Sbjct: 93  IGALKSISDPNSALSYFKMVSQLPNIVHTPETCNY--MLEFLRVHGRVEDMAFVFDLMQK 150

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
                N  T+ ++ K L  +  I +A     K++  G   N  +YN LI  L + G    
Sbjct: 151 QVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKE 210

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL ++K M      I    KP+  TYS ++  L +        +L  +M+   L PN+ T
Sbjct: 211 ALKVYKRM------ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYT 264

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           YT  I     A   ++A G+L  M D+G  P+VV+  V+++ LC  GK+D A  L   M 
Sbjct: 265 YTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMR 324

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
               +P+  TY TLM  F   G +  VK  +  ME+ G   D  +Y IL+   CK+ +V+
Sbjct: 325 ASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVD 384

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +A  + + +  +GI P + TYNTL  GL  +R+ + AL+LF  M+   VA    +Y  FI
Sbjct: 385 QAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFI 444

Query: 375 D 375
           D
Sbjct: 445 D 445



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 184/400 (46%), Gaps = 30/400 (7%)

Query: 7    SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
            SP  V+ + +L G +   +  D +  + + ++  GL      +  L+ C     ++    
Sbjct: 678  SPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737

Query: 67   VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLING 125
                 ++ +    +      LI+ LC + + ++A  LF K  K+ G  P   +YN L++G
Sbjct: 738  SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDG 797

Query: 126  LCRTGHTIVALNLFKEMTNG------------------NGEIGVVF-----------KPN 156
            L     T  AL LF EM N                   +  I  +F           KPN
Sbjct: 798  LLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPN 857

Query: 157  TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
             +T++III  L K   ++KA +L+ ++   + +P   TY  LI G   A    EA  +  
Sbjct: 858  IITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917

Query: 217  EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
            EM D   +PN    N+++N   K G ++ A  L   M++  +RP+  +Y  L++   +TG
Sbjct: 918  EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977

Query: 277  KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
            +++     F  ++  G   D  SYN++ING  K++ +EEALSL++E+  +GI P + TYN
Sbjct: 978  RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037

Query: 337  TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L          ++A K+F E+Q   +  +  TY   I G
Sbjct: 1038 ALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 7/343 (2%)

Query: 17   LLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
            L+  L K K       LF +   S+G  P   +Y+ L++             +F  +  +
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 76   CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
               PN+ T+  L+       RI E   L+ ++   GC+PN+IT+N +I+ L ++     A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 136  LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
            L+L+ E+ +G+      F P   TY  +I GL K G  ++A ++F +M      PN   Y
Sbjct: 878  LDLYYEIISGD------FSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIY 931

Query: 196  TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
              LI+GF  A + N A  L   M+ +G++P++ S  +++  L   G++D+A    + +  
Sbjct: 932  NILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL 991

Query: 256  CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
              + P+  +YN +++G   + ++     LF  M++ G   + ++YN LI  +     V++
Sbjct: 992  TGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ 1051

Query: 316  ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
            A  ++ EL F G++P V TYN L  G  +    +RA  +F +M
Sbjct: 1052 AGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 183/407 (44%), Gaps = 44/407 (10%)

Query: 8    PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
            PP   +FN LL CL KN   D  L +F R+  +   PD+ TY+ +I    K G+    F 
Sbjct: 609  PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFW 668

Query: 68   IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA----------AALFTKLKAFG------ 111
             + + ++   +P+ VT  +L+ G+  + R+ +A          + L T  + +G      
Sbjct: 669  FYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECI 727

Query: 112  ---------------------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
                                 C+ + +    LI  LC+    + A  LF + T   G   
Sbjct: 728  LIEAEIEEAISFAEGLVCNSICQDDNLIL-PLIRVLCKQKKALDAKKLFDKFTKSLGT-- 784

Query: 151  VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
                P   +Y+ ++DGL      + A +LF++MK     PN+ TY  L+     +   +E
Sbjct: 785  ---HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841

Query: 211  AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
               L  EM+ +G +PN+++ N+I++ L K+  ++ A  L   ++  D  P   TY  L+ 
Sbjct: 842  LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIG 901

Query: 271  GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
            G    G+     ++F  M    CK +   YNILING+ K   V  A  L+  +  +GI+P
Sbjct: 902  GLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRP 961

Query: 331  TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
             + +Y  L   LF   + + A+  F E++   +  DT +Y   I+GL
Sbjct: 962  DLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGL 1008



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 172/335 (51%), Gaps = 11/335 (3%)

Query: 5    HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
            HP+P    S+N L+  L      +  L LF  + + G  P+++TY++L++   K  ++  
Sbjct: 785  HPTP---ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841

Query: 65   GFVIFGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
             F ++  +L R C  PN++T   +I  L   + I +A  L+ ++ +    P   TY  LI
Sbjct: 842  LFELYNEMLCRGC-KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLI 900

Query: 124  NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
             GL + G +  A+ +F+EM +         KPN   Y+I+I+G  K G V+ A +LF +M
Sbjct: 901  GGLLKAGRSEEAMKIFEEMPDYQ------CKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 184  KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              E + P++ +YT L+         ++A     E+   G+ P+ VS N+++N L K+ ++
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 244  DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
            + A  L   M    + P  +TYN L+  F   G +++  ++F  ++ MG + + F+YN L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 304  INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
            I G+ K+   + A S++ ++   G  P   T+  L
Sbjct: 1075 IRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 32/406 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++NIL+  L K       L LF  +   G  P+  T++ L++C CK   V L   +
Sbjct: 575 PTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKM 634

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+     +P+V+T+ ++I GL  E R   A   + ++K F   P+ +T  TL+ G+ +
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVK 693

Query: 129 TGHTIVALNLFKEMTNGNG---------------------EIGVVFKPNTVTYSI----- 162
            G    A+ +  E  + +G                     E  + F    V  SI     
Sbjct: 694 DGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDN 753

Query: 163 ----IIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
               +I  LCK+     AK+LF +  K    +P   +Y  L+ G    N    A  L +E
Sbjct: 754 LILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVE 813

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           M + G  PN+ + N++++   K+ ++D    L + M+    +PN  T+N ++     +  
Sbjct: 814 MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
           IN+  +L+  + S        +Y  LI G  K    EEA+ ++ E+P    KP    YN 
Sbjct: 874 INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           L +G  +      A  LF  M    +  D  +Y   ++ L +  +V
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 11/288 (3%)

Query: 107 LKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI-----------GVVFKP 155
           LK+     + ++Y  +++ L    HT    N   E    +G +             V   
Sbjct: 96  LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N  TY  I   L  +G + +A     +M+      N  +Y  LI+         EA  + 
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
             M+ +G++P++ + + +M  L +         LL+ M    +RPN +TY   +      
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+I+    +  +ME  GC  D  +Y +LI+  C   ++++A  LY ++     KP +VTY
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            TL          E   + + EM+ +  A D  TY   ++ LC   +V
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   S+N+++  L K++  +  LSLF  + + G+ P+LYTY+ LI  F   G V     +
Sbjct: 996  PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            F  +      PNV T+ +LI+G         A ++F K+   GC PN  T+  L N
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M  SP  V    ++ GC  KN   +    LF ++  + +  + YTY++LIN F KMG
Sbjct: 190 MEEMGLSPNVVVYTTLIDGC-CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMG 248

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               G  ++ ++  +   PNV T+ S+I   C + ++  A  LF +++  G   NV+TYN
Sbjct: 249 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 308

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLC+    + A  L   M            PN ++Y+ +IDG C  G +DKA  LF
Sbjct: 309 TLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKASSLF 362

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QMK    +P++ TY  LI GF  A +      ++ EM  +G+ P+ V+  ++M+ L ++
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             ++ A ++   M +  +  + + Y  L+ G C+ G +    +LF S++ M  K +D  Y
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVE 357
           N +I GYCK      AL L  E+   G+ P V +YN+    L    +  +AE  LK  +E
Sbjct: 483 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIE 542

Query: 358 M 358
           +
Sbjct: 543 L 543



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN LL  L K+  ++    +F       +  D+Y++ I+I   C++G +  GF +
Sbjct: 128 PGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEV 186

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++     +PNVV +T+LI G C    I     LF K+       N  TY  LING  +
Sbjct: 187 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 246

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L+++M       G+V  PN  TY+ +I   C +G ++ A ELF +M+   +
Sbjct: 247 MGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 300

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NVVTY +LI G C      EA+ L+  M   G+ PN++S N +++  C  G +D AS 
Sbjct: 301 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 360

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYN L+ GF        V ++   ME+ G      +Y IL++   
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  +E+A  +Y+ +   G+   +  Y  L HGL  +   + A KLF  +    +  +  
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480

Query: 369 TYRTFIDGLC 378
            Y T I G C
Sbjct: 481 IYNTMIYGYC 490



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 12/371 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +  + D    +  ++  +GL P++  Y+ LI+  CK G +  G  +F 
Sbjct: 164 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 223

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++       N  T+T LI G        +   L+ K+K  G  PNV TYN++I   C  G
Sbjct: 224 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 283

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF EM     E GV    N VTY+ +I GLC+E  V +A+ L  +MK + L+P
Sbjct: 284 KLNNAFELFDEMR----ERGVAC--NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 337

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+++Y +LI G+C   + ++A  L  +M   G  P++ + N+++       +  N++ + 
Sbjct: 338 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF---SEAKNSAGVT 394

Query: 251 DLMVQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           D++ + + R   P+  TY  LMD    +  I +  +++ SME  G   D + Y +LI+G 
Sbjct: 395 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 454

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +++EA  L+  L    +KP  V YNT+ +G  +   + RAL+L  EM  N +  + 
Sbjct: 455 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 514

Query: 368 CTYRTFIDGLC 378
            +Y + I  LC
Sbjct: 515 ASYNSTIQILC 525



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 183/377 (48%), Gaps = 7/377 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+   P  V     ++    +++  +  L  F ++   GL P   T++ L+    K    
Sbjct: 87  HLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFF 146

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + +F    +     +V +F  +IKG C    + +   +  +++  G  PNV+ Y TL
Sbjct: 147 EKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTL 205

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G       LF +M    GE+ VV   N  TY+++I+G  K G      EL+ +
Sbjct: 206 IDGCCKNGDIERGKQLFYKM----GELDVV--ANQYTYTVLINGFFKMGLKKDGIELYEK 259

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK   + PNV TY S+I   C+    N A  L  EM ++GV  NVV+ N ++  LC+  +
Sbjct: 260 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 319

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A RL+  M +  + PN  +YNTL+DG+C  G +++   LF  M+S G      +YNI
Sbjct: 320 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI G+ + K       +  E+  +G+ P+ VTY  L   L      E+A +++  M+   
Sbjct: 380 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 439

Query: 363 VAADTCTYRTFIDGLCV 379
           + AD   Y   I GLCV
Sbjct: 440 LVADIYIYGVLIHGLCV 456



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 167/314 (53%), Gaps = 6/314 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           + L++++   G+ P++YTY+ +I   C  G+++  F +F  +     A NVVT+ +LI G
Sbjct: 254 IELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 313

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC E R++EA  L  ++K  G  PN+I+YNTLI+G C  G+   A +LF +M + +G+  
Sbjct: 314 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS-SGQ-- 370

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+  TY+I+I G  +        ++  +M+   L+P+ VTYT L+     +++  +
Sbjct: 371 ---SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 427

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +   M   G+  ++    V+++ LC  G M  AS+L   + +  ++PN   YNT++ 
Sbjct: 428 AFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 487

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+C  G   R   L   M   G   +  SYN  I   CK+++  EA  L  ++   G+KP
Sbjct: 488 GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547

Query: 331 TVVTYNTLFHGLFE 344
           ++  +N +    F+
Sbjct: 548 SISIWNMISKARFD 561



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 4/246 (1%)

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF E+T  + +    F  + + +  II+   +    ++A   F QM    L P   T+ +
Sbjct: 79  LFHELTQPHLD---SFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNN 135

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+     +N + +A  +  E     V+ +V S  +++   C+ G +D    +L  M +  
Sbjct: 136 LLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG 194

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + PN   Y TL+DG C  G I R K+LF  M  +    + ++Y +LING+ K    ++ +
Sbjct: 195 LSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGI 254

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            LY ++   GI P V TYN++        +   A +LF EM+   VA +  TY T I GL
Sbjct: 255 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 314

Query: 378 CVRPQV 383
           C   +V
Sbjct: 315 CQERRV 320


>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 196/373 (52%), Gaps = 12/373 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
            SSF++ +   A+   + TV SL  R+ S+ + P   T++I+   +   G+      +F 
Sbjct: 91  ASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150

Query: 71  RILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
            +    CF  ++ +F +++  LC   R+ +A  LF  L+      + +TYN ++NG C  
Sbjct: 151 NMHEHGCFQ-DLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLI 208

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
             T  AL + KEM     E G+   PN  TY+ ++ G  + G +  A E FL+MK  +  
Sbjct: 209 KRTPKALEVLKEMV----ERGI--NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
            +VVTYT+++HGF  A +   A+ +  EM+ +GV P+V + N ++  LCK   ++NA  +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
            + MV+    PN  TYN L+ G    G+ +R +EL   ME+ GC+ +  +YN++I  Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER---ALKLFVEMQGNDVAAD 366
             EVE+AL L+ ++      P + TYN L  G+F  +++E    A KL +EM        
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442

Query: 367 TCTYRTFIDGLCV 379
             T+   ++GL +
Sbjct: 443 KFTFNRVLNGLLL 455



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 11/346 (3%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR +   P P  +F I+    A     D  + LF  ++  G F DL +++ +++  CK  
Sbjct: 117 MRSLRIGPSP-KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V   + +F R LR  F+ + VT+  ++ G C   R  +A  +  ++   G  PN+ TYN
Sbjct: 176 RVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           T++ G  R G    A   F EM   + EI V      VTY+ ++ G    G + +A+ +F
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV------VTYTTVVHGFGVAGEIKRARNVF 288

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  E + P+V TY ++I   C  ++   A  +  EMV +G +PNV + NV++  L   
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G+      L+  M      PN  TYN ++  +    ++ +   LF  M S  C  +  +Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408

Query: 301 NILINGYCKNKEVEE---ALSLYNELPFKGIKPTVVTYNTLFHGLF 343
           NILI+G    K  E+   A  L  E+  +G  P   T+N + +GL 
Sbjct: 409 NILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLL 454



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 47/331 (14%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQ 61
           H H     ++SFN +L  L K+K  +    LF+ L   G F  D  TY++++N +C + +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKR 210

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
                 +   ++     PN+ T+ +++KG     +I  A   F ++K   CE +V+TY T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           +++G    G    A N+F EM       GV+  P+  TY+ +I  LCK+  V+ A  +F 
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIRE----GVL--PSVATYNAMIQVLCKKDNVENAVVMFE 324

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
           +M      PNV TY  LI G  HA +++  + L+  M ++G +PN  + N+++    +  
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384

Query: 242 KMDNA--------------------------------------SRLLDLMVQCDVRPNAF 263
           +++ A                                       +LL  MV+    P  F
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKF 444

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           T+N +++G  LTG     KE+       G +
Sbjct: 445 TFNRVLNGLLLTGNQAFAKEILRLQSKSGSR 475



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 5/181 (2%)

Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
           H   W+    L+  M    + P+  +  ++       GK D A +L   M +     +  
Sbjct: 107 HPTVWS----LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLA 162

Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
           ++NT++D  C + ++ +  ELF ++       D  +YN+++NG+C  K   +AL +  E+
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEM 221

Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             +GI P + TYNT+  G F   Q   A + F+EM+  D   D  TY T + G  V  ++
Sbjct: 222 VERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281

Query: 384 R 384
           +
Sbjct: 282 K 282



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 9/270 (3%)

Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
           PN++  N+++  L    H   AL  F  + N + E    +  +  ++ + ID   +    
Sbjct: 56  PNLV--NSVLKRLW--NHGPKALQFFHFLDNHHRE----YVHDASSFDLAIDIAARLHLH 107

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
                L  +M+   + P+  T+  +   +  A   ++A  L + M + G   ++ S N I
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           ++ LCK+ +++ A  L   + +     +  TYN +++G+CL  +  +  E+   M   G 
Sbjct: 168 LDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             +  +YN ++ G+ +  ++  A   + E+  +  +  VVTY T+ HG     + +RA  
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286

Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           +F EM    V     TY   I  LC +  V
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNV 316



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+  M    + P+  T+  + + +   GK ++  +LF++M   GC  D  S+N +++  C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+K VE+A  L+  L  +      VTYN + +G   I++  +AL++  EM    +  +  
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231

Query: 369 TYRTFIDGLCVRPQVRFTY 387
           TY T + G     Q+R  +
Sbjct: 232 TYNTMLKGFFRAGQIRHAW 250


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 194/405 (47%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L     YD  L L+  +   G+ P+  +   +++CF KMG      ++
Sbjct: 435 PTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMML 494

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  IL   F  + V F ++I GLC   +++EA A+F ++K  G  P+ ITY TL +G C+
Sbjct: 495 WKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCK 554

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  +   M             +   Y+ +IDGL K   ++   +L ++M+   L
Sbjct: 555 NGNVQEAFQIKGVMERQ------AMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGL 608

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +PNVVTY +LI G+C     ++A  L  EM+++G  PNVV  + I++ L ++ ++  A+ 
Sbjct: 609 SPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATV 668

Query: 249 LLDLMVQ-----------------------------------CDVRPNAFTYNTLMDGFC 273
           +LD M+                                    C+   N   YN  +DG C
Sbjct: 669 ILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLC 728

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
            +GK++  + +   + S G   D+F+Y  LI+    +  V+EA  L +E+  KG+ P + 
Sbjct: 729 KSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNIT 788

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            YN L +GL ++   +RA +LF ++    +  +  TY   I   C
Sbjct: 789 IYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 195/441 (44%), Gaps = 77/441 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + S + LLG L +       + +F ++   G+ PD+Y  SI++N  C++G+V +   +
Sbjct: 189 PGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEV 248

Query: 69  FGRILRSCFAP-----------------------------------NVVTFTSLIKGLCA 93
             ++++    P                                   NVVT T L++G C 
Sbjct: 249 LEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCK 308

Query: 94  ESRIVEAAALFTKLKA------------------------------------FGCEPNVI 117
           + ++ EA  L  +++                                      G + N++
Sbjct: 309 KGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMV 368

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
             NTLI G C+ G    A  +F  M + N       KP+  +Y+ ++DG C+EG V KA 
Sbjct: 369 ICNTLIKGYCKLGQVCEAERVFVGMVDWN------LKPDCYSYNTLLDGYCREGKVSKAF 422

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
            L  +M  + + P VVTY ++I G      +++A  L   MV++GV PN +S   +++  
Sbjct: 423 MLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCF 482

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            K G  D A  L   ++      +   +NT++ G C  GK+     +F  M+ +G   D+
Sbjct: 483 FKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDE 542

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  L +GYCKN  V+EA  +   +  + +  ++  YN+L  GLF+IR+      L VE
Sbjct: 543 ITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVE 602

Query: 358 MQGNDVAADTCTYRTFIDGLC 378
           MQ   ++ +  TY T I G C
Sbjct: 603 MQTRGLSPNVVTYGTLISGWC 623



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 6/317 (1%)

Query: 42  LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA 101
           L  D   Y +L++ +C+MG++     I   +LR     N+V   +LIKG C   ++ EA 
Sbjct: 328 LVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAE 387

Query: 102 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
            +F  +  +  +P+  +YNTL++G CR G    A  L +EM  G+G       P  VTY+
Sbjct: 388 RVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML-GDG-----ITPTVVTYN 441

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
            +I GL   G  D A  L+  M    + PN ++  +++  F    D + A  L  E++ +
Sbjct: 442 TVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGR 501

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
           G   + V+ N +++ LCK GK+  A  + D M +  + P+  TY TL DG+C  G +   
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
            ++   ME          YN LI+G  K +++ +   L  E+  +G+ P VVTY TL  G
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621

Query: 342 LFEIRQAERALKLFVEM 358
             + ++ ++A  L+ EM
Sbjct: 622 WCDEQKLDKAFHLYFEM 638



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 187/366 (51%), Gaps = 7/366 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+   A+       L +F  ++ IG  P L + S L+    + G+  +  ++F +I+
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +   P+V   + ++   C   R+  A  +  K+   G EPNV+TYN L+NG    G   
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPNV 192
               + + M+    E GV    N VT ++++ G CK+G +D+A++L  +++ +  L  + 
Sbjct: 279 GVERVLRLMS----ERGV--SRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDE 332

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             Y  L+ G+C      +A  +  EM+  G++ N+V  N ++   CK G++  A R+   
Sbjct: 333 RVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVG 392

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           MV  +++P+ ++YNTL+DG+C  GK+++   L   M   G      +YN +I G      
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS 452

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
            ++AL L++ +  +G+ P  ++  T+    F++  ++RA+ L+ E+ G      T  + T
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512

Query: 373 FIDGLC 378
            I GLC
Sbjct: 513 MISGLC 518



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 41/356 (11%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           +FN ++  L K        ++F R+  +GL PD  TY  L + +CK G V   F I G +
Sbjct: 509 AFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
            R   + ++  + SLI GL    ++ +   L  +++  G  PNV+TY TLI+G C     
Sbjct: 569 ERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKL 628

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL------------------------- 167
             A +L+ EM          F PN V  S I+  L                         
Sbjct: 629 DKAFHLYFEMIERG------FTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVH 682

Query: 168 --CKEGFVDKAKELFLQMKYENLN--------PNVVTYTSLIHGFCHANDWNEAKGLLIE 217
             C +  V     L  Q   ++L+         N + Y   I G C +   +EA+ +L  
Sbjct: 683 NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSV 742

Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
           ++ +G  P+  +   +++    +G +D A +L D M++  + PN   YN L++G C  G 
Sbjct: 743 LMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGN 802

Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
           I+R + LF  +   G   +  +YNILI  YC+  ++++A  L  ++  +GI   ++
Sbjct: 803 IDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 6/282 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           +  +N L+  L K +  + V  L   + + GL P++ TY  LI+ +C   ++   F ++ 
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++   F PNVV  + ++  L  + RI EA  +  K+  F     +  +N   + L +  
Sbjct: 637 EMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNKCSDKLVKND 693

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T+ A  +   +   +    +    N + Y+I IDGLCK G +D+A+ +   +      P
Sbjct: 694 LTLEAQKIADSLDKSDICNSL---SNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           +  TY +LIH    + + +EA  L  EM+++G+ PN+   N ++N LCK G +D A RL 
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
             + Q  + PNA TYN L+  +C  G +++   L   M   G
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 140/345 (40%), Gaps = 57/345 (16%)

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
           S + P+ ++++ L+  L       EA  +  +L    C  N   Y      +C       
Sbjct: 95  SHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAY-----AVCNH----- 144

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
             +++KE    +G            + +++    + G    A  +F +M      P + +
Sbjct: 145 VFSVYKEFGFCSG-----------VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRS 193

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
            + L+       +   A  +  ++V  G+ P+V   ++++N  C+ G++D A  +L+ MV
Sbjct: 194 CSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMV 253

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK--- 311
           +  + PN  TYN L++G+   G    V+ +   M   G   +  +  +L+ GYCK     
Sbjct: 254 KEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMD 313

Query: 312 -------EVEE--------------------------ALSLYNELPFKGIKPTVVTYNTL 338
                  EVEE                          A+ + +E+   G+K  +V  NTL
Sbjct: 314 EAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTL 373

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             G  ++ Q   A ++FV M   ++  D  +Y T +DG C   +V
Sbjct: 374 IKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKV 418



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 24/212 (11%)

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV-------- 232
           L  +  +  P+ ++Y+ L+H   HA  + EA  +L +++D     N  +  V        
Sbjct: 90  LATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVY 149

Query: 233 ------------IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
                       +M    + G   +A  + D M +    P   + + L+      G+   
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRV 209

Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
              +F  +   G   D +  +I++N +C+   V+ A+ +  ++  +G++P VVTYN L +
Sbjct: 210 AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269

Query: 341 GLF---EIRQAERALKLFVEMQGNDVAADTCT 369
           G     +    ER L+L  E +G      TCT
Sbjct: 270 GYVGRGDFEGVERVLRLMSE-RGVSRNVVTCT 300


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 192/390 (49%), Gaps = 22/390 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +  +L+  L K+     V  ++KR+   G+ P++Y Y+ LI+   K   V     I
Sbjct: 163 PHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFI 222

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P++ T+ +LI   C +    EA ++  K++  G   ++++YN+LI G C+
Sbjct: 223 LNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCK 282

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ +F E+ +          PN VTY+ +IDG CK    ++A  L   M  + L
Sbjct: 283 EGKMREAMRMFGEIKDA--------IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGL 334

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY S++   C      +A  LL EM ++ VQ + V+ N ++N  CK G +++A +
Sbjct: 335 YPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALK 394

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M++  + PN+FTY  L+ GFC T ++   KEL   M   G   +  +Y+ +++ YC
Sbjct: 395 FKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYC 454

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K    +  L+L +E   KG    +  Y  L   L +I + E A KL   M+G  ++ D+ 
Sbjct: 455 KKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSV 514

Query: 369 TYRTFIDGLCVRPQVRFTYARRKGNSGNTN 398
            Y +          + F+Y +    SGNTN
Sbjct: 515 IYTS----------LAFSYWK----SGNTN 530



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 8/327 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N L+    K   +   LS+  ++   G+  D+ +Y+ LI  FCK G++     +
Sbjct: 233 PDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRM 292

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG I  +   PN VT+T+LI G C  +   EA  L   + A G  P V+TYN+++  LC 
Sbjct: 293 FGEIKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCS 350

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  L  EM+          + ++VT + +I+  CK G ++ A +   +M    L
Sbjct: 351 DGRIRDANKLLHEMSERK------VQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGL 404

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  TY +LIHGFC  ++   AK LL  M+D G  PN  + + I++  CK    D    
Sbjct: 405 TPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLA 464

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D  +      N   Y  L+   C   +I   ++L   ME  G   D   Y  L   Y 
Sbjct: 465 LPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYW 524

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTY 335
           K+     A  +  E+  + +  TV  Y
Sbjct: 525 KSGNTNAASDMLEEMARRRLMITVKIY 551



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 10/288 (3%)

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITY--NTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           A+  I+ + ++ T L     +P V ++  + ++    ++  T  A+ +F++M+  N    
Sbjct: 105 AQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCN---- 160

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
              KP+    +++++ L K+G      +++ +M  + + PN+  Y  LIH    + D   
Sbjct: 161 --LKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVER 218

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A+ +L EM  +GV P++ + N ++   CK G    A  + D M +  +  +  +YN+L+ 
Sbjct: 219 AEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIY 278

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           GFC  GK+     +F  ++     H   +Y  LI+GYCK  E EEAL L   +  KG+ P
Sbjct: 279 GFCKEGKMREAMRMFGEIKDAIPNH--VTYTTLIDGYCKANEFEEALRLREMMVAKGLYP 336

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VVTYN++   L    +   A KL  EM    V AD+ T  T I+  C
Sbjct: 337 GVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYC 384


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 172/336 (51%), Gaps = 11/336 (3%)

Query: 41  GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
           G+ P    Y+  ++  CK G+V     +   +      P+VVTF +LI GLC   R+ EA
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108

Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
             +  +++  G   N++TYNTLINGL   G +  A+ + + MT           P+T TY
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---------TPDTQTY 159

Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           + II G CK G +D+A     +MK     +P+  TY+ LI+G C +++  +A  LL EM+
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219

Query: 220 D-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
             +    +VV+ N +++  CK   +D A  LL  M++    P+  TY+T++DG C  G +
Sbjct: 220 GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
           ++   L   M S GCK D  +Y +L+ G CK  ++ EA  L   +   G  P  VTY+ +
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLV 339

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           F GL +I + + A  L   ++      D   + T +
Sbjct: 340 FDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 170/337 (50%), Gaps = 12/337 (3%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           D YTY +L+   C  G++     +   + +    AP    +   +  LC   ++ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
              +K   C+P+V+T+NTLI GLC+ G    A  +  EM          F  N VTY+ +
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG------FAANLVTYNTL 130

Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-G 222
           I+GL   G   ++ E  L M+     P+  TY ++IHGFC + + + A G L EM  + G
Sbjct: 131 INGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG 187

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRV 281
             P+  + ++++N LCK+  +  A  LL  M+ + D   +   +NTL+DG+C    ++R 
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +EL  SM   GC  D  +Y+ +I+G C+  +V++  +L  ++  +G KP VVTY  L  G
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L +  +   A +L   M  +    +  TY    DGLC
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 12/343 (3%)

Query: 1   MRHMHPSP---PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC 57
           +R M   P   P  S +N  +  L K+      + + K +      PD+ T++ LI   C
Sbjct: 41  LREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLC 100

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K G++     +   + RS FA N+VT+ +LI GL +  R  EA  +   ++     P+  
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTTPDTQ 157

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           TYN +I+G C++G    A    +EM    G       P+T TYSI+I+GLCK   + KA 
Sbjct: 158 TYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNLRKAD 212

Query: 178 ELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           EL  +M   ++   +VV + +L+ G+C A D + A+ LL  M++ G  P+VV+ + I++ 
Sbjct: 213 ELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDG 272

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LC+ G +D    LL+ MV    +P+  TY  L+ G C  GK+     L   M   GC  +
Sbjct: 273 LCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPN 332

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +Y+++ +G CK  +++ A  L   +  KG    VV + TL 
Sbjct: 333 AVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           TY  L+   C A +   A  LL EM  Q G+ P     N  ++ LCK+GK+  A  ++  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M     +P+  T+NTL+ G C  G+++  +++   ME  G   +  +YN LING      
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 313 VEEALSLYNELPFKGIK--PTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADTCT 369
             EA+     L  +G+   P   TYN + HG  +  + +RA     EM Q    + DT T
Sbjct: 140 SGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194

Query: 370 YRTFIDGLCVRPQVR 384
           Y   I+GLC    +R
Sbjct: 195 YSILINGLCKSSNLR 209



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 232 VIMNELCKNGKMDNASRLL-DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
           V++   C  G++  A  LL ++  Q  + P    YN  +   C +GK+    E+  +M+ 
Sbjct: 23  VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD 82

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
             CK D  ++N LI G CK   ++EA  + +E+   G    +VTYNTL +GL     A R
Sbjct: 83  GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL---SSAGR 139

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA------RRKGNSGNT 397
           + +  + MQG     DT TY   I G C   ++   Y       +R G S +T
Sbjct: 140 SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++ +L+    +  + +  L L+K + S G    + + ++L+   CK  QV + F +
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKL 443

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +  +   P+++T+++LI GLC +  + +A  L+ K+ +    PN + +  ++ GLC 
Sbjct: 444 FCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCE 503

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A   F  +   N  + ++       Y+I+IDG  K G   +A +L+ Q+  + +
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIIL------YNIMIDGYIKRGNTREAVKLYKQLGEKGI 557

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           +P +VT+ SL++GFC     ++A+ LL  +   G++PN V+   +MN  C+ G M +   
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           LL  M    + P   TY  ++ G C   K+    +L   M+++G   D  SYN +I  +C
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K +++ +A  LY+++    ++PT VTYN L +G       + A  L V +Q   V  +  
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKY 737

Query: 369 TYRTFIDGLCVRPQV 383
            Y T I   C +  V
Sbjct: 738 AYTTIIKAHCAKGDV 752



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 41/410 (10%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P   S+NIL+  L         L L   + + GL PD+ TY+IL   F  +G ++ 
Sbjct: 310 HGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLING 369

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
            + I  ++L     PN+VT+T LI G C    + EA  L+ ++ + G + ++I+   L+ 
Sbjct: 370 AWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLG 429

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC++    VA  LF EM   NG      +P+ +TYS +I GLCK+G V +A  L+ +M 
Sbjct: 430 SLCKSRQVDVAFKLFCEM-EANG-----LRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483

Query: 185 YENLNPN-----------------------------------VVTYTSLIHGFCHANDWN 209
              + PN                                   ++ Y  +I G+    +  
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           EA  L  ++ ++G+ P +V+ N +M   C N K+  A RLLD +    + PNA TY TLM
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
           + +C  G +  + EL   M++        +Y ++I G CK  +++E+  L  ++   G+ 
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           P  V+YNT+     + R   +A +L+ +M  +++   + TY   I+G CV
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCV 713



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 37/405 (9%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H     + S  +LLG L K++  D    LF  + + GL PDL TYS LI+  CK G+V  
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +++ ++  +   PN +   +++ GLC + +I +A   F  L       ++I YN +I+
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVV-------------------------------- 152
           G  + G+T  A+ L+K++    GE G+                                 
Sbjct: 535 GYIKRGNTREAVKLYKQL----GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLH 590

Query: 153 -FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             +PN VTY+ +++  C+EG +    EL  +MK + + P  +TYT +I G C      E+
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES 650

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             LL +M   G+ P+ VS N I+   CK   M  A +L D M+  ++ P + TYN L++G
Sbjct: 651 CQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           FC+ G +     L VS+++     + ++Y  +I  +C   +V++A+  + ++  KG + +
Sbjct: 711 FCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVS 770

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           +  Y+ +   L +      A   F  M  + V  D   +   ++ 
Sbjct: 771 IRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 193/403 (47%), Gaps = 44/403 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           + ++N LL  L   +H + +  ++  +   G     YT SI+++  C+  +     + F 
Sbjct: 214 IQTYNSLLYNL---RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQ 270

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                 F P+VV+F +++   C    +  A + F  +   G  P+  +YN LI+GLC  G
Sbjct: 271 DTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAG 330

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               AL+L  +M N   E      P+ VTY+I+  G    G ++ A  +  +M  +  NP
Sbjct: 331 SMGEALDLKNDMENHGLE------PDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNP 384

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+VTYT LI G C   +  EA  L  EM+  G Q +++SS V++  LCK+ ++D A +L 
Sbjct: 385 NLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF 444

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES--------------MG-CKH 295
             M    +RP+  TY+TL+ G C  G++ +   L+  M S              MG C+ 
Sbjct: 445 CEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEK 504

Query: 296 DDFS--------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
              S                    YNI+I+GY K     EA+ LY +L  KGI PT+VT+
Sbjct: 505 GKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTF 564

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           N+L +G    R+  +A +L   ++ + +  +  TY T ++  C
Sbjct: 565 NSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 7/343 (2%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           IL+G   K K     +  F  L +  L  D+  Y+I+I+ + K G       ++ ++   
Sbjct: 497 ILMGLCEKGKISQARM-YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEK 555

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
             +P +VTF SL+ G C   ++ +A  L   +K  G EPN +TY TL+N  C  G+    
Sbjct: 556 GISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSL 615

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
           L L  EM            P  +TY+++I GLCK+  + ++ +L   M    L P+ V+Y
Sbjct: 616 LELLSEMK------AKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSY 669

Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
            ++I  FC A D  +A  L  +M+   ++P  V+ N+++N  C  G + +A  LL  +  
Sbjct: 670 NTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQN 729

Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
             V  N + Y T++   C  G +++    F  M   G +     Y+ +I   CK   V E
Sbjct: 730 RKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTE 789

Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           A   +  +   G+ P    +  L +   +        +L  EM
Sbjct: 790 AKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 159/307 (51%), Gaps = 9/307 (2%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           F  ++ T+ SL+  L   S I+    ++ ++K  G   +  T + +++GLCR      A+
Sbjct: 210 FIVSIQTYNSLLYNL-RHSNIM--WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAV 266

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
             F++        G  F+P+ V+++ I+   CK GFVD AK  F  M    L P+  +Y 
Sbjct: 267 LFFQDTE------GKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYN 320

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            LIHG C A    EA  L  +M + G++P++V+ N++       G ++ A  ++  M+  
Sbjct: 321 ILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIK 380

Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
              PN  TY  L+ G C  G +    +L+  M S G +    S  +L+   CK+++V+ A
Sbjct: 381 GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVA 440

Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             L+ E+   G++P ++TY+TL HGL +  + ++A+ L+ +M  N +  ++  +   + G
Sbjct: 441 FKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMG 500

Query: 377 LCVRPQV 383
           LC + ++
Sbjct: 501 LCEKGKI 507



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 14/297 (4%)

Query: 92  CAESR---IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGE 148
           CA SR   + +A  +  K+K      ++ TYN+L+  L    H+ +  +++        E
Sbjct: 187 CAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL---RHSNIMWDVY-------NE 236

Query: 149 IGVVFKPNT-VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
           I V   P +  T SI++DGLC++     A   F   + +   P+VV++ +++  +C    
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            + AK     M+  G+ P+  S N++++ LC  G M  A  L + M    + P+  TYN 
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L  GF L G IN    +   M   G   +  +Y +LI G+C+   VEEAL LY E+   G
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHG 416

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + ++++   L   L + RQ + A KLF EM+ N +  D  TY T I GLC + +V+
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQ 473



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 6/284 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +FN L+     N+       L   +   GL P+  TY+ L+N +C+ G +     +
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P  +T+T +IKGLC + ++ E+  L   + A G  P+ ++YNT+I   C+
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  L+ +M   N E      P +VTY+I+I+G C  G +  A  L + ++   +
Sbjct: 679 ARDMRKAFQLYDKMLLHNLE------PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           N N   YT++I   C   D ++A     +MV++G + ++   + ++  LCK   +  A  
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKY 792

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
              +M+   V P+   +  L++ F   G +N   EL   M   G
Sbjct: 793 FFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L    K K++  V   +K +   G    LY ++IL++ FCK G++ L
Sbjct: 95  HKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM  GNG +     PN VT++ +IDG CK G +D A E + +M 
Sbjct: 215 GLCKESKMNDANELFGEMI-GNGLV-----PNGVTFTTLIDGHCKTGSIDLAMETYKEML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            +  +P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 RQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K D+ +Y ++I
Sbjct: 329 TALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V+    L  E+   G  P VVT
Sbjct: 389 NEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 6/304 (1%)

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
           F K+    L +  +  IL   +  ++  F  L+   C E  +  A ++F ++  +G  P+
Sbjct: 111 FMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPS 170

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
           V+++NTL+NG  R G       L K   + +G      +P+  TYS++I+GLCKE  ++ 
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKMND 224

Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
           A ELF +M    L PN VT+T+LI G C     + A     EM+ QG  P++++ N ++ 
Sbjct: 225 ANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIY 284

Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
            LCK G +  A  L+D M    ++P+  TY TL+DG C  G +         M     + 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRL 344

Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
           DD +Y  LI+G C+  +  +A  +  E+   G+KP   TY  + +   +    +   KL 
Sbjct: 345 DDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLL 404

Query: 356 VEMQ 359
            EMQ
Sbjct: 405 KEMQ 408



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 120/223 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F ++    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KM++A+ L   M+   + PN  T+ TL+DG C TG I+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSID 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E +  M   G   D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
            G  +    E AL     M   ++  D   Y   I GLC   Q
Sbjct: 319 DGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQ 361



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 6/340 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      F       F     T   +++              +
Sbjct: 65  DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++   G   ++  +N L++  C+ G   +A ++F E+T          +P+ V+++ ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  + G +D+   L   M    + P+V TY+ LI+G C  +  N+A  L  EM+  G+ 
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CK G +D A      M++    P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK  ++E AL     +  + I+   V Y  L  GL  
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCR 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             Q+  A K+  EM    +  D  TY   I+  C +  V+
Sbjct: 359 EGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVK 398



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 117/228 (51%), Gaps = 8/228 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    +    LF  +   GL P+  T++ LI+  CK G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGS 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           + L    +  +LR  F+P+++T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 257 IDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    AL   K M   N       + + V Y+ +I GLC+EG    A+++  
Sbjct: 317 LIDGSCKEGDLETALYYRKRMIKEN------IRLDDVAYTALISGLCREGQSVDAEKMLR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT +I+ FC   D      LL EM   G  P VV+
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   ++  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM N NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMEDANELFDEMLN-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L  EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KM++A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D+Y +S LI  + + G +      +       F     T   +I+ L            +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +   +G   ++  +N L++   + G   +A ++F  +T          +P+ V+++ ++
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLM 178

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  K G +D+   L   M+   + P+V TY+ LI+G C  +   +A  L  EM++ G+ 
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLV 238

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN V+   +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M   G K D  +Y  LI+G CK   +E A      +  + I+   V Y  L  GL +
Sbjct: 299 TDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
             ++  A K+  EM    +  +  TY   I+  C +  V
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +   G++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K+    ELF  M + G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGHLETAFEYRK 335



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVFKP----------NTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF            +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   +I        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++E+A  L++E+   G+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 43/397 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N LL  L + +  + ++ +F+R+ S    P+  +Y  L+   C+ G++         + R
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
               P+V T+  +I  LC   RI  A   F  +     EP+V+TYNTL+ GLC+ G    
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQ 119

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A +LF  M       G    P+ VTY+ +ID  CK    + A  L   M     +P V +
Sbjct: 120 ACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYS 173

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y S+I+G C     ++A  L  EM   G +P+ V+ N +++ LC   ++  A  LL +MV
Sbjct: 174 YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +   +P+  T+  L++G C T +I     LF  M   GC  D  ++ +L++  C  +++ 
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLR 293

Query: 315 EALSLYNELPF---------------------------------KGIKPTVVTYNTLFHG 341
            ALS+    P                                  +G+ P VVTY   F G
Sbjct: 294 PALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKG 353

Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           L + ++  RA + F  M    +  D   Y   +DG C
Sbjct: 354 LGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFC 390



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 39/376 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N LLG L KN       SLF  +   G+ P   TY+ LI+ FCKM Q    + +
Sbjct: 99  PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGL 158

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +     +P V ++ S+I GLC   ++ +A  LF ++K  GC+P+ +TYNTLI+GLC 
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A +L   M   NG     F+P+ +T++ +I+GLC    + +A  LF  M  +  
Sbjct: 219 KQRLHEAKDLLTVMVE-NG-----FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 272

Query: 189 NPNVVTYTSLIHGFC---------------------------------HANDWNEAKGLL 215
            P++VT+T L+   C                                     ++ A  LL
Sbjct: 273 APDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLL 332

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
            +M  +GV PNVV+       L    +   A R    M++  + P+   YN L+DGFC  
Sbjct: 333 QKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKA 392

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
            +++  +++   M+  G   +  +YN L+  +C+  +VE    L + +  +G +P V T+
Sbjct: 393 DRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATW 452

Query: 336 NTLFHGLFEIRQAERA 351
           +TL  GLF + QA+ A
Sbjct: 453 STLVAGLFMVGQADAA 468



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 10/303 (3%)

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
           VT  +L+  L    R  +   +F ++ +  C+PN ++Y  L+  LCRTG    A +   E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M            P+  TY+++ID LCK   + +A E F  M      P+VVTY +L+ G
Sbjct: 61  MAREK------LVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGG 110

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
            C      +A  L   M   G+ P+ V+   +++  CK  + + A  LL LM      P 
Sbjct: 111 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 170

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
            ++Y ++++G C   K+++  +LF  M+  GCK D  +YN LI+G C  + + EA  L  
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLT 230

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRP 381
            +   G +P  +T+  L  GL    + + A  LF  M     A D  T+   +  LC+  
Sbjct: 231 VMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILR 290

Query: 382 QVR 384
           ++R
Sbjct: 291 KLR 293



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 117 ITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
           +T N L++ L R   +   + +F+ + + +       KPN ++Y  ++  LC+ G +DKA
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQD------CKPNALSYCYLVKALCRTGKIDKA 54

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
                +M  E L P+V TY  +I   C A   + A    IE  +   +P+VV+ N ++  
Sbjct: 55  CSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA----IEFFETMPEPDVVTYNTLLGG 110

Query: 237 LCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHD 296
           LCKNG++  A  L   M    + P+  TY TL+D FC   +      L   M S  C   
Sbjct: 111 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 170

Query: 297 DFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
            +SY  +ING CKN++V++A  L+ E+   G KP  VTYNTL HGL   ++   A  L  
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLT 230

Query: 357 EMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
            M  N    D  T+   I+GLC   +++  +   +G
Sbjct: 231 VMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQG 266



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N L+  L   +       L   +   G  PD  T++ LI   C   ++   FV+
Sbjct: 204 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVL 263

Query: 69  FGRILRSCFAPNVVTFTSLIKGLC------------------AESRIV------------ 98
           F  + +   AP++VT T L+  LC                   E+ I+            
Sbjct: 264 FQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRR 323

Query: 99  ---EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
               AA L  K+   G  PNV+TY     GL      + A   F+ M     E G+  +P
Sbjct: 324 GFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRML----EQGI--EP 377

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           + V Y++++DG CK   +D A+++   M    L PN+VTY +L+   C          LL
Sbjct: 378 DMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELL 437

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
             MV +G QP+V + + ++  L   G+ D A   L+L
Sbjct: 438 HTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNL 474



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 39/247 (15%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS----- 63
           P   +F  L+  L           LF+ +   G  PDL T+++L++  C + ++      
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298

Query: 64  ------------------------LGFVIFGRIL----RSCFAPNVVTFTSLIKGLCAES 95
                                    GF    R+L    R    PNVVT+T+  KGL    
Sbjct: 299 VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWK 358

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
             + A   F ++   G EP+++ YN L++G C+     +A  + + M            P
Sbjct: 359 EGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG------LPP 412

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N VTY+ ++   C++G V+   EL   M      P+V T+++L+ G       + A   L
Sbjct: 413 NIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472

Query: 216 IEMVDQG 222
              + QG
Sbjct: 473 NLAMSQG 479



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V ++      L   K        F+R+   G+ PD+  Y++L++ FCK  ++ +   
Sbjct: 341 PPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEK 400

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   + +S   PN+VT+ +L+   C + ++     L   + + G +P+V T++TL+ GL 
Sbjct: 401 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460

Query: 128 RTGHTIVALNLFK-EMTNG 145
             G    A +     M+ G
Sbjct: 461 MVGQADAAYSFLNLAMSQG 479


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+ V++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GL +      A  LF EM       G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 221 GLSKESKMDDADELFDEMLVK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ +M  +G++P+ ++   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A      M+Q ++R +   Y  L+ G C  G+    +++   M S+G   D  +Y ++I
Sbjct: 335 SAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+ +
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GL KE  +D A 
Sbjct: 179 SYNTLMNGYIRLGVLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLSKESKMDDAD 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M +  ++P+  TY TL+DG C  G ++   E    M     + DD
Sbjct: 293 CKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
             Y  LI+G C+     +A  +  E+   G+ P   TY  + +   +     +  KL  E
Sbjct: 353 VVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ +       TY   ++G
Sbjct: 413 MQRDGHVPSVVTYNVLMNG 431



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 117/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+ V+Y +L++G+      +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N L K  KMD+A  L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +++  KG+KP  +TY TL 
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A +    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLC 363



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSAVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G    +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 191 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +  +L   M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  +++ A      +  + I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  DT TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLNPDTGTYTMIINEFCKKGDV 403



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+ VS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G     K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  +M    +  D  TY T IDG 
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDSAFEHRK 341



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+A +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING  K  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 183/392 (46%), Gaps = 44/392 (11%)

Query: 30  VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
            L+L+ R+ + G  P+  TY++L++  CK G       +F  +L+    PNV T T L+ 
Sbjct: 193 ALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLS 252

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN----- 144
            +C   ++ EA  L   ++  GC P+ +TYN  ++GLC+ G    A+   + +       
Sbjct: 253 SMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFV 312

Query: 145 ----------------GNGEIG----------VVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
                           G  E G            F P+ V Y+I+I G  + G +D A  
Sbjct: 313 LGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFA 372

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
            F +MK +   P+   Y +L+   C + D + A+ L+ EM    V  +  +  ++++ LC
Sbjct: 373 FFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLC 432

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME--------- 289
           K   +D A ++ D MV+    P   TYN L+DG     ++   + LF  ME         
Sbjct: 433 KKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFL 492

Query: 290 --SMGCKH--DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
             ++G     D  S   L++  C++ +V +A  L   +   G+ P VVTYNTL +GL ++
Sbjct: 493 RLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKV 552

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           R  + AL+LF E+Q    + D  TY T ID L
Sbjct: 553 RNLDGALRLFRELQVKGFSLDEITYGTLIDSL 584



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 186/401 (46%), Gaps = 23/401 (5%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV-SLGF 66
           PP ++F  L+   A   +H++ V +  +     G  P  + Y+ ++      G V  L  
Sbjct: 135 PPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLAL 194

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            ++ R++ +   PN  T+  L+ GLC     V+A  LF ++   G  PNV T+  L++ +
Sbjct: 195 ALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSM 254

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C  G    A NL   M +          P+ VTY+  + GLCK G VD+A E    ++  
Sbjct: 255 CNAGQLKEAENLLNSMEDKG------CPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRT 308

Query: 187 -NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMD 244
                 +  Y+ LI G   A  + E     +E+++Q    P++V   +++    + G++D
Sbjct: 309 GTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRID 368

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
           +A    D M +    P+ F YNTL+   C +G ++  + L   M       D  ++ I+I
Sbjct: 369 DAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMI 428

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ----- 359
           +G CK + V+EA+ +++ +   G  PTV+TYN L  GL+   + E A  LF +M+     
Sbjct: 429 HGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNP 488

Query: 360 --------GNDVAADTCTYRTFIDGLCVRPQVRFTYARRKG 392
                   G +   D+ + +  +D +C   QV   Y   +G
Sbjct: 489 SLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRG 529



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 25/367 (6%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQVSLGF 66
           PP   ++N  L  L K    D  +   + L   G F   L  YS LI+     G+   GF
Sbjct: 276 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGF 335

Query: 67  VIFGRILRSC-FAPNVVTFTSLIKGLCAES-RIVEAAALFTKLKAFGCEPNVITYNTLIN 124
             +  +L    F+P++V +T +I+G CAE+ RI +A A F ++K     P+   YNTL+ 
Sbjct: 336 QCYMEVLEQADFSPDIVLYTIMIRG-CAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLK 394

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC +G    A +L  EM   N    VV   N  T++I+I GLCK+  VD+A ++F  M 
Sbjct: 395 ALCDSGDLDGARSLMSEMAQNN----VVLDTN--THTIMIHGLCKKQLVDEAMQVFDGMV 448

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV--------------SS 230
               +P V+TY  LI G   A+   EA+ L  +M + G  P++               S 
Sbjct: 449 EVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESL 507

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++ +C++G++  A +LL  ++   V P+  TYNTL++G C    ++    LF  ++ 
Sbjct: 508 QKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQV 567

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G   D+ +Y  LI+   +     +A++L+ ++   G  P++  YN++   L  + +  +
Sbjct: 568 KGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQ 627

Query: 351 ALKLFVE 357
           A+  + +
Sbjct: 628 AINFWFD 634



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 177/408 (43%), Gaps = 25/408 (6%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  + I++   A+    D   + F  +      PD + Y+ L+   C  G +     +
Sbjct: 349 PDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSL 408

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++    +  T T +I GLC +  + EA  +F  +   GC P V+TYN LI+GL R
Sbjct: 409 MSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYR 468

Query: 129 TGHTIVALNLFKEMTNGNGE-------IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
                 A  LF +M  GN         +G     ++ +   ++D +C+ G V KA +L  
Sbjct: 469 AHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLR 528

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
            +    + P+VVTY +L++G C   + + A  L  E+  +G   + ++   +++ L +  
Sbjct: 529 GIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAH 588

Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
           + ++A  L   ++     P+   YN++M   C   K+++    +   + +  K++  + +
Sbjct: 589 RYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFW--FDHLLKKYNLSAQD 646

Query: 302 ILINGYCKNKE---VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF--V 356
            +I    K  E   ++EA+    ++  +        Y     GL + R+ + ALK+F  +
Sbjct: 647 EVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHIL 706

Query: 357 EMQGNDVAADTCTY-----------RTFIDGLCVRPQVRFTYARRKGN 393
           E  G D+    C +            + +D +      RF  +R  GN
Sbjct: 707 EESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGN 754



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 109/271 (40%), Gaps = 41/271 (15%)

Query: 108 KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
           +A G +P    +  LI      G    A++ F  M    GE G   +P T  Y+ ++  L
Sbjct: 129 QAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRM---EGEFGC--RPTTFVYNAVLRVL 183

Query: 168 CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNV 227
              G                    VV                 A  L   MV  G  PN 
Sbjct: 184 VASG-------------------GVVPL---------------ALALYNRMVAAGCLPNR 209

Query: 228 VSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVS 287
            + NV+M+ LCK G   +A +L D M+Q  + PN  T+  L+   C  G++   + L  S
Sbjct: 210 ATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNS 269

Query: 288 MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHGLFEIR 346
           ME  GC  D+ +YN  ++G CK   V+EA+     L   G     +  Y+ L  GLF   
Sbjct: 270 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAG 329

Query: 347 QAERALKLFVE-MQGNDVAADTCTYRTFIDG 376
           + E   + ++E ++  D + D   Y   I G
Sbjct: 330 RYEEGFQCYMEVLEQADFSPDIVLYTIMIRG 360



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINR 280
           G+QP   +   ++      G+   A      M  +   RP  F YN ++     +G +  
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191

Query: 281 VK-ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           +   L+  M + GC  +  +YN+L++G CK     +AL L++E+  +GI P V T+  L 
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV-----RFTYARRKGN 393
             +    Q + A  L   M+      D  TY  F+ GLC   +V     R    RR G 
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGT 310



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 55/339 (16%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLF----------PDLYTYSILINC 55
           P V ++N+L+  L +    +    LF ++   N+  LF           D  +   L++ 
Sbjct: 454 PTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDS 513

Query: 56  FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
            C+ GQV   + +   I+ S   P+VVT+ +L+ GLC    +  A  LF +L+  G   +
Sbjct: 514 MCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLD 573

Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCK------ 169
            ITY TLI+ L R      A+ LF+++ +  G       P+   Y+ I+  LC+      
Sbjct: 574 EITYGTLIDSLLRAHRYNDAMTLFQDILHIGG------TPSLSIYNSIMRSLCRMNKLSQ 627

Query: 170 ------------------------------EGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
                                         EG +D+A    +++  E  + N   YT  +
Sbjct: 628 AINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWL 687

Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
            G   A   ++A  +   + + G+         +   LC    +D+A  ++   +     
Sbjct: 688 IGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFI 747

Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
            +    N L+   C+  +    + L   M  +G   D +
Sbjct: 748 MSRHVGNRLLSSLCIRHRRKDAQALAWRMHLVGYDMDAY 786


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 181/350 (51%), Gaps = 14/350 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +  +N L+  L  +K    ++ L   +++ GL P++ TY  LI  +C  G++   F  
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++   FAPNV+  + ++  L    RI EA  L  K+         + ++ +++  C 
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM---------VDFDLVLDHRCL 525

Query: 129 ---TGHTIVALNLFKEMTNGNGEIGVVFK-PNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
                  I  L+ +K + +   E  + F  PN V Y+I + GLCK G V+ A+  FL + 
Sbjct: 526 EDFQNADIRKLDCWK-IADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLS 584

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           + +  P+  TY +LIHGF  A   NEA  L  EMV++G+ PN+ + N ++N LCK+G +D
Sbjct: 585 HGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLD 644

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A RL D +    + PN  TYN L+DG+C +G      +L   M   G      +Y+ LI
Sbjct: 645 RARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLI 704

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
           NG+CK  +VEEA+ L NE+    +  T+ T++ L  G  +    ++  KL
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 200/439 (45%), Gaps = 65/439 (14%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           +   P + S N LL  L K     + + ++ ++  + + PD++T +I++N +CK G+V  
Sbjct: 25  YGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVER 84

Query: 65  -------------------------GFVIFGRI----------LRSCFAPNVVTFTSLIK 89
                                    G+V  G I                 N VT T LIK
Sbjct: 85  AVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIK 144

Query: 90  GLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM------ 142
           G C + ++ EA  +  ++ K  G   +   Y  LI+G C+ G    A+ +  EM      
Sbjct: 145 GYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLK 204

Query: 143 ---------TNG---NGEI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
                     NG   NG++            +  KP++ +Y  ++DG C++G   KA  +
Sbjct: 205 MNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNV 264

Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
             QM  + + P VVTY +L+ G C   D+ +A  L   M+ +GV PN V    +++ L K
Sbjct: 265 CDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFK 324

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G    A  L D ++   +  + + +NT+++G C  G+++  KE F  ME +GCK D  +
Sbjct: 325 MGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           Y  L +GYCK   VEEA  +  ++  + I P++  YN+L  GLF  ++  + + L  EM 
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444

Query: 360 GNDVAADTCTYRTFIDGLC 378
              ++ +  TY   I G C
Sbjct: 445 TRGLSPNVVTYGALIAGWC 463



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 180/379 (47%), Gaps = 14/379 (3%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
            + +FN ++  L K    D     FKR+  +G  PD  TY  L + +CK+G V   F I 
Sbjct: 346 SIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIK 405

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
            ++ +    P++  + SLI GL    +I +   L  ++   G  PNV+TY  LI G C  
Sbjct: 406 EKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQ 465

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
           G    A + + EM      IG  F PN +  S I+  L + G +D+A  L  +M    ++
Sbjct: 466 GRLDKAFSAYFEM------IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM----VD 515

Query: 190 PNVVTYTSLIHGFCHAN----DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
            ++V     +  F +A+    D  +    L E   +   PN V  N+ M  LCK+GK+++
Sbjct: 516 FDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVND 575

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A R    +      P+ FTY TL+ GF   G +N    L   M + G   +  +YN L+N
Sbjct: 576 ARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLN 635

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           G CK+  ++ A  L+++L  KG+ P VVTYN L  G  +      AL L  +M    ++ 
Sbjct: 636 GLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISP 695

Query: 366 DTCTYRTFIDGLCVRPQVR 384
              TY + I+G C +  V 
Sbjct: 696 SIITYSSLINGFCKQSDVE 714



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 187/364 (51%), Gaps = 7/364 (1%)

Query: 16  ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           ++L   A+       L +F  +   G  P L + + L++   K G+     +++ ++ R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              P+V T   ++   C   ++  A     +++  G E N ++YN+L++G    G    A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LNPNVVT 194
             + K M+    E GV+   N VT +++I G CK+  V++A+++  +M+ E+ +  +   
Sbjct: 121 KGVLKFMS----EKGVM--RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y +LI G+C      +A  +  EM+  G++ N+   N ++N  CKNG++    RLL  M 
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           + D++P++++Y TL+DG+C  G  ++   +   M   G +    +YN L+ G C+  + +
Sbjct: 235 KLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +AL L++ +  +G+ P  V Y TL  GLF++    RAL L+ ++    +      + T I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354

Query: 375 DGLC 378
           +GLC
Sbjct: 355 NGLC 358



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 168/327 (51%), Gaps = 6/327 (1%)

Query: 40  IGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVE 99
           +GL  +L+  + LIN +CK GQV  G  +   + +    P+  ++ +L+ G C +    +
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSK 260

Query: 100 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT 159
           A  +  ++   G EP V+TYNTL+ GLCR G    AL L+  M     + GV   PN V 
Sbjct: 261 AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML----QRGVT--PNEVG 314

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y  ++DGL K G   +A  L+  +    +N ++  + ++I+G C   + + AK     M 
Sbjct: 315 YCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRME 374

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           + G +P+ ++   + +  CK G ++ A ++ + M + ++ P+   YN+L+ G   + KI+
Sbjct: 375 ELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKIS 434

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           ++ +L   M++ G   +  +Y  LI G+C    +++A S Y E+  KG  P V+  + + 
Sbjct: 435 KLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIV 494

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAAD 366
             L+ + + + A  L  +M   D+  D
Sbjct: 495 SSLYRLGRIDEANMLLQKMVDFDLVLD 521



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 6/211 (2%)

Query: 43  FPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAA 102
            P+   Y+I +   CK G+V+     F  +    F P+  T+ +LI G  A   + EA  
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 103 LFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           L  ++   G  PN+ TYN L+NGLC++G+   A  LF ++ +  G I     PN VTY+I
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL-HLKGLI-----PNVVTYNI 667

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +IDG CK G   +A +L  +M  E ++P+++TY+SLI+GFC  +D  EA  LL EM    
Sbjct: 668 LIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN 727

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           V   + + + ++    ++G +   S+L ++M
Sbjct: 728 VDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 1/223 (0%)

Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
           +I+    ++G V  A  +F  M      P++ +  SL+       +   A  +  +M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
            + P+V +  +++N  CK GK++ A   +  M +     NA +YN+L+DG+   G I   
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK-GIKPTVVTYNTLFH 340
           K +   M   G   +  +  +LI GYCK  +VEEA  +  E+  + G+      Y  L  
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  ++ +   A+++  EM    +  +     + I+G C   QV
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 1/116 (0%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+    P V ++NIL+    K+      L L  ++   G+ P + TYS LIN FCK   V
Sbjct: 654 HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDV 713

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
                +   +  S     + TF+ L++G C +   V+  +    +    C    IT
Sbjct: 714 EEAMKLLNEMKASNVDQTIATFSKLVEG-CIQHGDVKKMSKLHNMMHMACPSAGIT 768


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANVLFDEMLDK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM+ +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G KP+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 146/287 (50%), Gaps = 6/287 (2%)

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L   +  ++  F  L+ G   E  I  A ++F  +  +G  P+V+++NTL+NG  + G  
Sbjct: 128 LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD- 186

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
              LN    + N     GV  +P+  TYS++I+GLCKE  +D A  LF +M  + L PN 
Sbjct: 187 ---LNEGFRLKNAMQASGV--QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+T+LI G C     + A  +  +M+ Q + P++++ N ++  LCK G +  A  L+D 
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M+   ++P+  TY TL+DG C  G +    E    M     + DD +Y  LI+G C+   
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
             +A  +  E+   G+KP + TY  + +   +        KL  EMQ
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++ G  KEG +  A+ +F  +    L P+VV++ +L++G+    D NE   L   M 
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++G  + G   +A ++F  +T          +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D+G+ PN V+ 
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+HGF    +   A+ +   +   G++P+VVS N +MN   K G ++   RL + M    
Sbjct: 142 LMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++    LF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G +N    L 
Sbjct: 135 SLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 176/325 (54%), Gaps = 6/325 (1%)

Query: 10  PVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
           P  +   +L  L K K++  V S +K +        LY ++IL++ FCK G++ L   +F
Sbjct: 100 PFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVF 159

Query: 70  GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
             I +    P+VV+F +L+ G      + E   L + + A G +P+V TY+ LINGLC+ 
Sbjct: 160 DGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKE 219

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A  LF EM +     G+V  PN VT++ +IDG CK G +D A E++ QM  +  +
Sbjct: 220 SKMDEAHKLFDEMLDR----GLV--PNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFS 273

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+ +TY +LI+G C   D  +AK L  EM  +G++P+ ++   +++  CK G ++ A   
Sbjct: 274 PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M++ ++R +  +Y  L+ G C  G+    +++   M S+G K D  +Y I+++ +CK
Sbjct: 334 RKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCK 393

Query: 310 NKEVEEALSLYNELPFKGIKPTVVT 334
           N +V+    L  E+   G  P V+T
Sbjct: 394 NGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 154/285 (54%), Gaps = 6/285 (2%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P  +  FNIL+    K        S+F  +   GL P + +++ L+N + K+G +  GF 
Sbjct: 133 PASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFR 192

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +   +  S   P+V T++ LI GLC ES++ EA  LF ++   G  PN +T+ TLI+G C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHC 252

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G   +A+ ++K+M +        F P+ +TY+ +I GLCK+G + +AK+L  +M  + 
Sbjct: 253 KNGKLDLAMEIYKQMLSQG------FSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKG 306

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L P+ +TYT+LI G C   D   A      M+ + ++ + VS   +++ LCK G+  +A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAE 366

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
           ++L  M+   ++P+  TY  +M  FC  G +    +L   M+  G
Sbjct: 367 KMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C E  I  A ++F  +  +G  P+V+
Sbjct: 113 KLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVV 172

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           ++NTL+NG  + G       L K   + +G      +P+  TYS++I+GLCKE  +D+A 
Sbjct: 173 SFNTLMNGYIKLGDLDEGFRL-KSAMHASG-----VQPDVYTYSVLINGLCKESKMDEAH 226

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           +LF +M    L PN VT+T+LI G C     + A  +  +M+ QG  P+ ++ N ++  L
Sbjct: 227 KLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGL 286

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L D M    ++P+  TY TL+DG C  G +    E    M     + DD
Sbjct: 287 CKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDD 346

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            SY  LI+G CK     +A  +  E+   G+KP   TY  + H   +    +   KL  E
Sbjct: 347 VSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKE 406

Query: 358 MQGN 361
           MQ +
Sbjct: 407 MQRD 410



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++D  CKEG +  A+ +F  +    L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD A +L D M+   + PN  T+ TL+DG C  GK++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S G   D  +YN LI G CK  ++ +A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D  +Y   I GLC
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLC 357



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 6/266 (2%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N L++  C+ G   +A ++F  +T          +P+ V+++ +++G  K G +D+   
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWG------LRPSVVSFNTLMNGYIKLGDLDEGFR 192

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M    + P+V TY+ LI+G C  +  +EA  L  EM+D+G+ PN V+   +++  C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHC 252

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KNGK+D A  +   M+     P+  TYNTL+ G C  G + + K+L   M   G K D  
Sbjct: 253 KNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKI 312

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G CK  ++E A      +  + I+   V+Y  L  GL +  ++  A K+  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREM 372

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQVR 384
               +  DT TY   +   C    V+
Sbjct: 373 LSVGLKPDTGTYTIVMHEFCKNGDVK 398



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 8/228 (3%)

Query: 4   MHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
           MH S   P V ++++L+  L K    D    LF  +   GL P+  T++ LI+  CK G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256

Query: 62  VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
           + L   I+ ++L   F+P+ +T+ +LI GLC +  + +A  L  ++   G +P+ ITY T
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316

Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
           LI+G C+ G    A    K M   N       + + V+Y+ +I GLCKEG    A+++  
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKEN------IRLDDVSYTALISGLCKEGRSVDAEKMLR 370

Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           +M    L P+  TYT ++H FC   D      LL EM   G  P V++
Sbjct: 371 EMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 100/194 (51%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+  FC   +   A+ +   +   G++P+VVS N +MN   K G +D   RL   M    
Sbjct: 142 LMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   +LF  M   G   +  ++  LI+G+CKN +++ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  +G  P  +TYNTL +GL +     +A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGS 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%)

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           +++C    + + +N LMD FC  G+I   + +F  +   G +    S+N L+NGY K  +
Sbjct: 127 ILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGD 186

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           ++E   L + +   G++P V TY+ L +GL +  + + A KLF EM    +  +  T+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTT 246

Query: 373 FIDGLC 378
            IDG C
Sbjct: 247 LIDGHC 252


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L + +++  V   +K +   G    LY ++IL+  FCK G++ L
Sbjct: 95  HKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +LI G      + E   L + + A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+ G    A  LF EM + NG +     PN VT++ +I G CK   VD A E++ QM 
Sbjct: 215 GLCKEGKLDEANELFNEMLD-NGLV-----PNGVTFTTLIHGHCKNEKVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L+P+++TY +LI+G C   +  +   L+ EM+  G++P+ +S   +++  CK G ++
Sbjct: 269 SQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L + M+Q  +R +   Y  L+   C  G+    +++   M S+G K D+ +Y ++I
Sbjct: 329 IALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK ++ + A  L  E+   G  P VVT
Sbjct: 389 NEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 6/291 (2%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L   +  ++  F  L++  C E  +  A ++F  +  +G  P+V+++NTLING  +
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G       L   M     +      P+  TYSI+I+GLCKEG +D+A ELF +M    L
Sbjct: 184 LGDLDEGFRLKSAMHASGAQ------PDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN VT+T+LIHG C     + A  +  +M+ QG+ P++++ N ++  LCK G++     
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L+D M+   ++P+  +Y TL+DG C  G +    EL   M     + DD +Y  LI+  C
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           +     +A  +  E+   G+KP   TY  + +   + R ++ A KL  EMQ
Sbjct: 358 REGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQ 408



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 6/262 (2%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N L+   C+ G   +A ++F  +T          +P+ V+++ +I+G  K G +D+   
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWG------LRPSVVSFNTLINGYIKLGDLDEGFR 192

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M      P+V TY+ LI+G C     +EA  L  EM+D G+ PN V+   +++  C
Sbjct: 193 LKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHC 252

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KN K+D A  +   M+   + P+  TYNTL+ G C  G++ +V +L   M   G K D  
Sbjct: 253 KNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKI 312

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           SY  LI+G CK  ++E AL L N++  + I+   V Y  L   L    +A  A K+  EM
Sbjct: 313 SYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREM 372

Query: 359 QGNDVAADTCTYRTFIDGLCVR 380
               +  D  TY   I+  C +
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKK 394



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 11/240 (4%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CKEG +  A+ +F  +    L P+VV++ +LI+G+    D +E   L   M 
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             G QP+V + ++++N LCK GK+D A+ L + M+   + PN  T+ TL+ G C   K++
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S G   D  +YN LI G CK  E+++   L +E+   G+KP  ++Y TL 
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTNR 399
            G  +    E AL+L  +M    +  D   Y   I  LC           R+G +G+  +
Sbjct: 319 DGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC-----------REGRAGDAEK 367



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H   + P V +++IL+  L K    D    LF  +   GL P+  T++ LI+  CK  +V
Sbjct: 198 HASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKV 257

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            L   I+ ++L    +P+++T+ +LI GLC +  + +   L  ++   G +P+ I+Y TL
Sbjct: 258 DLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTL 317

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G   +AL L  +M      I    + + V Y+ +I  LC+EG    A+++  +
Sbjct: 318 IDGSCKEGDLEIALELRNKM------IQESIRLDDVAYTALISCLCREGRAGDAEKMLRE 371

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVS 229
           M    L P+  TYT +I+ FC   D   A  LL EM   G  P VV+
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV--VF------KPNTVTYSIIIDGL-- 167
           +Y T+I+ LC     I A +L + + +  G+     VF      K   ++   +  GL  
Sbjct: 15  SYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSGLMI 74

Query: 168 --CKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GFV  A + F   K   +     T   ++        +        E+++ G   
Sbjct: 75  AYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M   CK G+M  A  + D + +  +RP+  ++NTL++G+   G ++    L 
Sbjct: 135 SLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y+ILING CK  +++EA  L+NE+   G+ P  VT+ TL HG  + 
Sbjct: 195 SAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC + +++
Sbjct: 255 EKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMID-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +   +L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++   + G   +A ++F  +T  +       +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN V+ 
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +    ++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++A  L++E+   G+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 189/369 (51%), Gaps = 6/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +F  L+  L +    D   SL++++      P++  Y+ LI  F K G+   G  I
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  ++    +P+++   S +  +     + +  ALF ++KA G  P+V +Y+ LI+GL +
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G +     LF EM      + V+       Y+ +IDG CK G VDKA +L  +MK + L
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVL------AYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P VVTY S++ G    +  +EA  L  E    GV  NVV  + +++   K G++D A  
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ ++Q  + PN++T+N L+D      +I+  +  F +M+++ C  +  +Y+I+ING C
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
             ++  +A   + E+  +G+KP  +TY T+  GL +      A  LF   + +    D+ 
Sbjct: 774 MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSA 833

Query: 369 TYRTFIDGL 377
            Y   I+GL
Sbjct: 834 CYNAMIEGL 842



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 191/375 (50%), Gaps = 6/375 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
             + P ++++NIL+  L K    +  L +   +   GLFP++ T +I+I+  CK  ++  
Sbjct: 406 QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              IF  +     +P+  TF SLI GL    R+ +A +L+ K+      PNV+ Y +LI 
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
              + G       ++KEM +          P+ +  +  +D + K G V+K + LF ++K
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRG------CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIK 579

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            + L P+V +Y+ LIHG   A    E   L  EM +QG+  +V++ N +++  CK+GK+D
Sbjct: 580 AQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVD 639

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +LL+ M    ++P   TY +++DG     +++    LF   +S+G   +   Y+ LI
Sbjct: 640 KAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI 699

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G+ K   ++EA  +  EL  KG+ P   T+N L   L +  + + A   F  M+    +
Sbjct: 700 DGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCS 759

Query: 365 ADTCTYRTFIDGLCV 379
            +  TY   I+GLC+
Sbjct: 760 PNAMTYSIMINGLCM 774



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 7/374 (1%)

Query: 4   MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
           ++ S P V ++N ++        +D   SL +R    G  P +  Y+ ++ C  + G+V 
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395

Query: 64  LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
               I    +R   APN+ T+  LI  LC    +  A  +   +K  G  PN++T N +I
Sbjct: 396 EALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMI 454

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
           + LC+      A ++F  + +       V  P++ T+  +IDGL + G VD A  L+ +M
Sbjct: 455 DRLCKAQKLDEACSIFLGLDHK------VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
              +  PNVV YTSLI  F       +   +  EMV +G  P+++  N  M+ + K G++
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           +    L + +    + P+  +Y+ L+ G    G      +LF  M+  G   D  +YN +
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           I+G+CK+ +V++A  L  E+  KG++PTVVTY ++  GL +I + + A  LF E +   V
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 364 AADTCTYRTFIDGL 377
             +   Y + IDG 
Sbjct: 689 DLNVVIYSSLIDGF 702



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 184/412 (44%), Gaps = 42/412 (10%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  F  L+   A+    D  LSL   + S     DL  Y++ I+CF K+G+V + +  F 
Sbjct: 238 VHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFH 297

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL----------------------- 107
            +      P+ VT+T+LI  LC   R+ EA  LF +L                       
Sbjct: 298 EMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAG 357

Query: 108 ------------KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
                       K  GC P+VI YN ++  L R G    AL +  EM            P
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-------P 410

Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
           N  TY+I+ID LCK G ++ A ++   MK   L PN++T   +I   C A   +EA  + 
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470

Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
           + +  +   P+  +   +++ L + G++D+A  L + M+  D  PN   Y +L+  F   
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530

Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
           G+     +++  M   GC  D    N  ++   K  EVE+  +L+ E+  +G+ P V +Y
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           + L HGL +   +    KLF EM+   +  D   Y T IDG C   +V   Y
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 171/348 (49%), Gaps = 12/348 (3%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           ++K +   G  PDL   +  ++C  K G+V  G  +F  I      P+V +++ LI GL 
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGV 151
                 E   LF ++K  G   +V+ YNT+I+G C++G    A  L +EM T G      
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG------ 652

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             +P  VTY  ++DGL K   +D+A  LF + K   ++ NVV Y+SLI GF      +EA
Sbjct: 653 -LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEA 711

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +L E++ +G+ PN  + N +++ L K  ++D A      M      PNA TY+ +++G
Sbjct: 712 YLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C+  K N+    +  M+  G K ++ +Y  +I G  K   V EA  L++     G  P 
Sbjct: 772 LCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTCTYRTFIDGL 377
              YN +  GL    +A  A  +F E  ++G  V + TC     +D L
Sbjct: 832 SACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCV--VLLDAL 877



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 161/343 (46%), Gaps = 6/343 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +   N  + C+ K    +   +LF+ + + GL PD+ +YSILI+   K G     + +
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +       +V+ + ++I G C   ++ +A  L  ++K  G +P V+TY ++++GL +
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF+E  +    IGV    N V YS +IDG  K G +D+A  +  ++  + L
Sbjct: 670 IDRLDEAYMLFEEAKS----IGVDL--NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN  T+  L+     A + +EA+     M +    PN ++ ++++N LC   K + A  
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
               M +  ++PN  TY T++ G    G +   + LF   ++ G   D   YN +I G  
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
              +  +A  ++ E   KG +    T   L   L +    E+A
Sbjct: 844 SANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 7/375 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N  L  +A+ ++ D +  + + ++  G     +    L+  F K  ++   F +   + 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           +  F P    +T+LI  L A +R      LF +++  G E NV  + TL+    R G   
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL+L  EM + +      F  + V Y++ ID   K G VD A + F +MK + L P+ V
Sbjct: 256 AALSLLDEMKSNS------FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDV 309

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TYT+LI   C A   +EA  L  E+      P V + N ++      GK D A  LL+  
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    P+   YN ++      GK+     +   M      +   +YNILI+  CK  E+
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLT-TYNILIDMLCKAGEL 428

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
           E AL + + +   G+ P ++T N +   L + ++ + A  +F+ +     + D+ T+ + 
Sbjct: 429 EAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSL 488

Query: 374 IDGLCVRPQVRFTYA 388
           IDGL  R +V   Y+
Sbjct: 489 IDGLGRRGRVDDAYS 503



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  LAK    D    LF+   SIG+  ++  YS LI+ F K+G++   ++I
Sbjct: 655 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI 714

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PN  T+  L+  L     I EA   F  +K   C PN +TY+ +INGLC 
Sbjct: 715 LEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCM 774

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   ++EM           KPN +TY+ +I GL K G V +A+ LF + K    
Sbjct: 775 IRKFNKAFVFWQEMQKQG------LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGG 828

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+   Y ++I G   AN   +A  +  E   +G + N  +  V+++ L K   ++ A+
Sbjct: 829 VPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAA 887



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 21/263 (7%)

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTV---------------------TYSIIIDGLCKEGFV 173
           ALN+F EM+     +GV+ +   V                      Y+  +  + +   +
Sbjct: 90  ALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNL 149

Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
           D  +++  +M       +      L+  F  ++   EA G++  M     +P   +   +
Sbjct: 150 DYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTL 209

Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
           +  L    + D    L   M +     N   + TL+  F   G+I+    L   M+S   
Sbjct: 210 IGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSF 269

Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
             D   YN+ I+ + K  +V+ A   ++E+  +G+ P  VTY TL   L + R+ + A++
Sbjct: 270 TADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVE 329

Query: 354 LFVEMQGNDVAADTCTYRTFIDG 376
           LF E+  N        Y T I G
Sbjct: 330 LFEELDLNRSVPCVYAYNTMIMG 352


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 183/350 (52%), Gaps = 7/350 (2%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           DT    + ++ + G  PD+ T++IL++  CK       F  F  + +    PN+ T+ +L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           I GL    RI +A  L   +++ G +P   TY T I+   ++G T  A+  F++M     
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK-- 466

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
             G+V  PN V  +  +  L + G + +AK +F  ++   L P+ VTY  ++  +     
Sbjct: 467 --GIV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA  LL EM+  G +P+V+  N +++ L K G++D A ++ D M    + P   TYNT
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+ G    G++ +  ELF SM    C  +  S+N L++ +CKN EVE AL +++++    
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            KP V+TYNT+ +GL +  +   A   F +++ + +  D  T  T + GL
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGL 691



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+N L+  L ++      L +++R+ S GL P L TYS L+    K     +  V+   +
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
                 PNV TFT  I+ L    +I EA  +F ++   GC P+++TY  LI+ LC  G  
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A  LF +M   NG      KP+ V Y  ++D     G +D  KE + QM+ +   P+V
Sbjct: 314 ENAKELFVKM-KANGH-----KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VT+T L+   C A D++EA      M  QG+ PN+ + N ++  L + G++++A +LLD 
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC------------------- 293
           M    V+P A+TY T +D F  +G+  +  E F  M++ G                    
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 294 ----------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                             D  +YN+++  Y K  +V+EA++L +E+   G +P V+  N+
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
           L   L++  + + A ++F  M+   ++    TY T + GL    +V+
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 41/413 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + +++ L+  L K +  + V+ L K +  +GL P++YT++I I    + G++   + I
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+      P++VT+T LI  LC   ++  A  LF K+KA G +P+ + Y TL++    
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     L+ FKE  +     G  + P+ VT++I++D LCK    D+A   F  M+ + +
Sbjct: 345 FGD----LDTFKEFWSQMEADG--YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ------------------------ 224
            PN+ TY +LI G   A    +A  LL  M   GVQ                        
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458

Query: 225 -----------PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                      PN+V+ N  +  L + G++  A  + + + +  + P++ TYN +M  + 
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++    L   M   GC+ D    N LI+   K   V+EA  +++ +    + PTVV
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFT 386
           TYNTL  GL +  + ++A++LF  M     + +T ++ T +D  C   +V   
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELA 631



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 187/414 (45%), Gaps = 41/414 (9%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V +F I +  L +    D    +F+R++  G  PDL TY++LI+  C  GQ+     +
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 69  F-----------------------------------GRILRSCFAPNVVTFTSLIKGLCA 93
           F                                    ++    + P+VVTFT L+  LC 
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                EA A F  ++  G  PN+ TYNTLI GL R G    AL L   M +    +GV  
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES----VGV-- 433

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P   TY   ID   K G   KA E F +MK + + PN+V   + ++         EAK 
Sbjct: 434 QPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   + + G+ P+ V+ N++M    K G++D A  LL  M++    P+    N+L+D   
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G+++   ++F  M+ M       +YN L++G  K   V++A+ L+  +  K   P  +
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           ++NTL     +  + E ALK+F +M   D   D  TY T I GL    +V   +
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 9/338 (2%)

Query: 52   LINCFCKMGQVSLGFVIFGRILRSC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
            L+   CK  +    + IF +  +    +P + ++  LI  L       +A  LF  +K  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 111  GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
            GC P+  T+N L+    ++G       L+KEM      I    KP+ +TY+I+I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEM------ISRRCKPDAITYNIVISSLAKS 871

Query: 171  GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
              +DKA + F  +   +  P   TY  LI G        EA  L  EM D G +PN    
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 231  NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
            N+++N   K G  + A +L   MV   +RP+  +Y  L+D  CL G+++     F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 291  MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
             G   D  +YN +ING  K++ +EEAL+LYNE+  +GI P + TYN+L   L      E+
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 351  ALKLFVEMQGNDVAADTCTYRTFIDG--LCVRPQVRFT 386
            A +++ E+Q   +  D  TY   I G  L   P+  +T
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 173/330 (52%), Gaps = 6/330 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P ++S+N L+G L +  + +    LFK + ++G  PD +T+++L+    K G+++  F +
Sbjct: 786  PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            +  ++     P+ +T+  +I  L   + + +A   F  L +    P   TY  LI+GL +
Sbjct: 846  YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A+ LF+EM++         KPN   ++I+I+G  K G  + A +LF +M  E +
Sbjct: 906  VGRLEEAMRLFEEMSDYGC------KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P++ +YT L+   C A   +EA     E+   G+ P+ ++ N I+N L K+ +M+ A  
Sbjct: 960  RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L + M    + P+ +TYN+LM    L G + + K ++  ++  G + D F+YN LI GY 
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             ++  E A ++Y  +   G  P + TY  L
Sbjct: 1080 LSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 170/340 (50%), Gaps = 8/340 (2%)

Query: 32  SLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
           ++  ++   G   + Y+Y+ LI+   + G       ++ R++     P++ T+++L+  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 92  CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN-GNGEIG 150
             +        L  +++  G  PNV T+   I  L R G    A  +F+ M + G G   
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCG--- 294

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+ VTY+++ID LC  G ++ AKELF++MK     P+ V Y +L+  F    D + 
Sbjct: 295 ----PDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
            K    +M   G  P+VV+  ++++ LCK    D A    D+M +  + PN  TYNTL+ 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G    G+I    +L  +MES+G +   ++Y   I+ + K+ E  +A+  + ++  KGI P
Sbjct: 411 GLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVP 470

Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
            +V  N   + L E+ +   A  +F  ++ N +A D+ TY
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P   +FN+LL    K+     +  L+K + S    PD  TY+I+I+   K   +      
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+PN   +N LING  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G T  A  LFK M N         +P+  +Y+I++D LC  G VD+A   F ++K   L
Sbjct: 941  IGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            +P+ + Y  +I+G   +    EA  L  EM ++G+ P++ + N +M  L   G ++ A R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
            + + +    + P+ FTYN L+ G+ L+        ++ +M   GC  +  +Y  L N
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 180/405 (44%), Gaps = 44/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V   N L+  L K    D    +F R+  + L P + TY+ L++   K G+V     +
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  ++    +PN ++F +L+   C    +  A  +F+K+    C+P+V+TYNT+I GL +
Sbjct: 600 FESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK----AKELFLQMK 184
                 A   F ++            P+ VT   ++ GL K G +      A++   Q++
Sbjct: 660 ENKVNHAFWFFHQLKKS-------MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVR 712

Query: 185 -------YENLNPNVVTYTSL-----------IHGFCHANDW----------NEAKGLLI 216
                  +E+L    +    +           ++G C  + +          ++ +    
Sbjct: 713 FRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAY 772

Query: 217 EMVDQ-----GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
           ++ D+     G+ P + S N ++ EL +    + A  L   M      P+AFT+N L+  
Sbjct: 773 QIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAV 832

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
              +GKI  + EL+  M S  CK D  +YNI+I+   K+  +++AL  + +L     +PT
Sbjct: 833 HGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
             TY  L  GL ++ + E A++LF EM       +   +   I+G
Sbjct: 893 PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 153/309 (49%), Gaps = 6/309 (1%)

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +F  + +     ++ T+ ++ K L     + +   +  K++  G   N  +YN LI+ L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
            ++G    AL +++ M +         KP+  TYS ++  L K+   +    L  +M+  
Sbjct: 203 IQSGFCGEALEVYRRMVSEG------LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L PNV T+T  I     A   +EA  +   M D+G  P++V+  V+++ LC  G+++NA
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
             L   M     +P+   Y TL+D F   G ++  KE +  ME+ G   D  ++ IL++ 
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK ++ +EA + ++ +  +GI P + TYNTL  GL    + E ALKL   M+   V   
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436

Query: 367 TCTYRTFID 375
             TY TFID
Sbjct: 437 AYTYITFID 445



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%)

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
           + + +  TY  I   L   G + +   +  +M+      N  +Y  LIH    +    EA
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             +   MV +G++P++ + + +M  L K    +    LL  M    +RPN +T+   +  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
               GKI+   E+F  M+  GC  D  +Y +LI+  C   ++E A  L+ ++   G KP 
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            V Y TL     +    +   + + +M+ +    D  T+   +D LC
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLC 378


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 10/361 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M  M  SP  V    ++ GC  KN   +    LF ++  + +  + YTY++LIN F KMG
Sbjct: 177 MEEMGLSPNVVVYTTLIDGC-CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMG 235

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
               G  ++ ++  +   PNV T+ S+I   C + ++  A  LF +++  G   NV+TYN
Sbjct: 236 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 295

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI GLC+    + A  L   M            PN ++Y+ +IDG C  G +DKA  LF
Sbjct: 296 TLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKASSLF 349

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            QMK    +P++ TY  LI GF  A +      ++ EM  +G+ P+ V+  ++M+ L ++
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
             ++ A ++   M +  +  + + Y  L+ G C+ G +    +LF S++ M  K +D  Y
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL---FEIRQAERALKLFVE 357
           N +I GYCK      AL L  E+   G+ P V +YN+    L    +  +AE  LK  +E
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIE 529

Query: 358 M 358
           +
Sbjct: 530 L 530



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++FN LL  L K+  ++    +F       +  D+Y++ I+I   C++G +  GF +
Sbjct: 115 PGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEV 173

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G++     +PNVV +T+LI G C    I     LF K+       N  TY  LING  +
Sbjct: 174 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 233

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G     + L+++M       G+V  PN  TY+ +I   C +G ++ A ELF +M+   +
Sbjct: 234 MGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 287

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             NVVTY +LI G C      EA+ L+  M   G+ PN++S N +++  C  G +D AS 
Sbjct: 288 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 347

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + M      P+  TYN L+ GF        V ++   ME+ G      +Y IL++   
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           ++  +E+A  +Y+ +   G+   +  Y  L HGL  +   + A KLF  +    +  +  
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 467

Query: 369 TYRTFIDGLC 378
            Y T I G C
Sbjct: 468 IYNTMIYGYC 477



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 12/371 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V SF I++    +  + D    +  ++  +GL P++  Y+ LI+  CK G +  G  +F 
Sbjct: 151 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 210

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
           ++       N  T+T LI G        +   L+ K+K  G  PNV TYN++I   C  G
Sbjct: 211 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 270

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A  LF EM     E GV    N VTY+ +I GLC+E  V +A+ L  +MK + L+P
Sbjct: 271 KLNNAFELFDEMR----ERGVAC--NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 324

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N+++Y +LI G+C   + ++A  L  +M   G  P++ + N+++       +  N++ + 
Sbjct: 325 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF---SEAKNSAGVT 381

Query: 251 DLMVQCDVR---PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           D++ + + R   P+  TY  LMD    +  I +  +++ SME  G   D + Y +LI+G 
Sbjct: 382 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 441

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C   +++EA  L+  L    +KP  V YNT+ +G  +   + RAL+L  EM  N +  + 
Sbjct: 442 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 501

Query: 368 CTYRTFIDGLC 378
            +Y + I  LC
Sbjct: 502 ASYNSTIXILC 512



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 182/377 (48%), Gaps = 7/377 (1%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H+   P  V     ++    +++  +  L    ++   GL P   T++ L+    K    
Sbjct: 74  HLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFF 133

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
              + +F    +     +V +F  +IKG C    + +   +  +++  G  PNV+ Y TL
Sbjct: 134 EKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTL 192

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           I+G C+ G       LF +M    GE+ VV   N  TY+++I+G  K G      EL+ +
Sbjct: 193 IDGCCKNGDIERGKQLFYKM----GELDVV--ANQYTYTVLINGFFKMGLKKDGIELYEK 246

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           MK   + PNV TY S+I   C+    N A  L  EM ++GV  NVV+ N ++  LC+  +
Sbjct: 247 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 306

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +  A RL+  M +  + PN  +YNTL+DG+C  G +++   LF  M+S G      +YNI
Sbjct: 307 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 366

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LI G+ + K       +  E+  +G+ P+ VTY  L   L      E+A +++  M+   
Sbjct: 367 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 426

Query: 363 VAADTCTYRTFIDGLCV 379
           + AD   Y   I GLCV
Sbjct: 427 LVADIYIYGVLIHGLCV 443



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 167/314 (53%), Gaps = 6/314 (1%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKG 90
           + L++++   G+ P++YTY+ +I   C  G+++  F +F  +     A NVVT+ +LI G
Sbjct: 241 IELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 300

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           LC E R++EA  L  ++K  G  PN+I+YNTLI+G C  G+   A +LF +M + +G+  
Sbjct: 301 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS-SGQ-- 357

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
               P+  TY+I+I G  +        ++  +M+   L+P+ VTYT L+     +++  +
Sbjct: 358 ---SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 414

Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
           A  +   M   G+  ++    V+++ LC  G M  AS+L   + +  ++PN   YNT++ 
Sbjct: 415 AFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 474

Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
           G+C  G   R   L   M   G   +  SYN  I   CK+++  EA  L  ++   G+KP
Sbjct: 475 GYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP 534

Query: 331 TVVTYNTLFHGLFE 344
           ++  +N +    F+
Sbjct: 535 SISIWNMISKARFD 548



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 4/246 (1%)

Query: 138 LFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTS 197
           LF E+T  + +    F  + + +  II+   +    ++A     QM    L P   T+ +
Sbjct: 66  LFHELTQPHLD---SFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNN 122

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+     +N + +A  +  E     V+ +V S  +++   C+ G +D    +L  M +  
Sbjct: 123 LLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG 181

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           + PN   Y TL+DG C  G I R K+LF  M  +    + ++Y +LING+ K    ++ +
Sbjct: 182 LSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGI 241

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            LY ++   GI P V TYN++        +   A +LF EM+   VA +  TY T I GL
Sbjct: 242 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 301

Query: 378 CVRPQV 383
           C   +V
Sbjct: 302 CQERRV 307


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 202/410 (49%), Gaps = 52/410 (12%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILI--------------- 53
           P V ++N+++  L K   +D  L +++R+       DL+TYS LI               
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 54  --------------------NCFCKMGQVSLGF---VIFGRILRSCFAPNVVTFTSLIKG 90
                               N FC+ G++   F   V+ G+   +C   NVV++   I+G
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK--ENCH--NVVSYNIFIRG 368

Query: 91  LCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIG 150
           L    ++ EA +++  L+  G   +  TY  LI+GLC+ GH   AL + KE  +G  ++ 
Sbjct: 369 LFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL- 427

Query: 151 VVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYE-NLNPNVVTYTSLIHGFCHANDW 208
                +   YS I+DGL K+G VD+A  +  QM KY   L+P+V     LI+GF  A+  
Sbjct: 428 -----DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN--PLINGFVRASKL 480

Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
            EA     EM  +G  P VVS N ++N LCK  +  +A   +  M++ D +P+  TY+ L
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540

Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
           MDG C   KI+    L+  +   G + D   +NIL++G C   ++E+AL LY+ +     
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600

Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            P +VT+NTL  GL++ R+ E A  ++  M  N    D  +Y   + GLC
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLC 650



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 43/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTY------------------- 49
           P + ++NIL+    K + +     L   + S  L PD+Y+Y                   
Sbjct: 147 PNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEV 206

Query: 50  ----------------SILINCFCKMGQVSLGFVIFGRILR-SCFAPNVVTFTSLIKGLC 92
                           +I+I+ F K G    G  I+ R+++ SC  PNVVT+  +I GLC
Sbjct: 207 FDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLC 266

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
              R  E+  ++ ++K   CE ++ TY++LI GLC  G+   A+ ++KEM   +      
Sbjct: 267 KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRS------ 320

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              + VTY+ +++G C+ G + ++ EL++ M  EN + NVV+Y   I G        EA 
Sbjct: 321 VVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAI 379

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +   +  +G   +  +  V+++ LCKNG ++ A ++L        + +AF Y++++DG 
Sbjct: 380 SVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGL 439

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
              G+++    +   M+  GC+      N LING+ +  ++EEA+  + E+  KG  PTV
Sbjct: 440 SKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTV 499

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           V+YNTL +GL +  +   A     EM   D   D  TY   +DGLC
Sbjct: 500 VSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLC 545



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 9/369 (2%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSI-GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
           +L   AK+K  +  L  F+++  I G  P + +Y+ L+N F +   +             
Sbjct: 84  VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV 143

Query: 76  CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
              PN+ T+  LIK    + + VEA  L   + +   +P+V +Y T+ING+ ++G  + A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVT 194
           L +F EM     E G+V  P+ + Y+I+IDG  K G   + KE++ ++ K   + PNVVT
Sbjct: 204 LEVFDEMF----ERGLV--PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVT 257

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           Y  +I+G C    ++E+  +   M     + ++ + + ++  LC  G +D A  +   MV
Sbjct: 258 YNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMV 317

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  V  +  TYN L++GFC  GKI    EL+V M    C H+  SYNI I G  +N++VE
Sbjct: 318 KRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVE 376

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           EA+S++  L  +G      TY  L HGL +     +ALK+  E +      D   Y + +
Sbjct: 377 EAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIV 436

Query: 375 DGLCVRPQV 383
           DGL  + +V
Sbjct: 437 DGLSKQGRV 445



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 167/336 (49%), Gaps = 8/336 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+NI +  L +N+  +  +S+++ L   G   D  TY +LI+  CK G ++    I  
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
                    +   ++S++ GL  + R+ EA  +  ++  +GCE +    N LING  R  
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478

Query: 131 HTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
               A+  F+EM T G         P  V+Y+ +I+GLCK      A     +M  ++  
Sbjct: 479 KLEEAICFFREMETKG-------CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWK 531

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P+++TY+ L+ G C     + A  L  +++ +G++P+V   N++M+ LC  GK+++A  L
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLL 591

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              M Q +  PN  T+NTLMDG     +      ++  M   G + D  SYNI + G C 
Sbjct: 592 YSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCS 651

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
              + + ++L+++    GI PT +T+  L   + ++
Sbjct: 652 CGRISDGIALFDDALKNGILPTSITWYILVRAVLKL 687



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 45/307 (14%)

Query: 12  SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           +++ +L+  L KN H +  L + K     G   D + YS +++   K G+V     I  +
Sbjct: 395 TTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQ 454

Query: 72  ILR-SC-FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
           + +  C  +P+V     LI G    S++ EA   F +++  GC P V++YNTLINGLC+ 
Sbjct: 455 MDKYGCELSPHVCN--PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKA 512

Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                A +  KEM   +      +KP+ +TYS+++DGLC+   +D A  L+ Q+  + L 
Sbjct: 513 ERFSDAYSFVKEMLEKD------WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566

Query: 190 PNVVTYTSLIHGFCHANDWNEA---------------------------KGLLIEMVD-- 220
           P+V  +  L+HG C A    +A                           K    EM    
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVI 626

Query: 221 ------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
                  G QP+++S N+ +  LC  G++ +   L D  ++  + P + T+  L+     
Sbjct: 627 WACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK 686

Query: 275 TGKINRV 281
            G ++ +
Sbjct: 687 LGPLDSL 693



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 21/321 (6%)

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           IF  ILR    P +V   +         RIVE      K +   C  +V+   T++    
Sbjct: 45  IFLLILRRLSDPKLVVHVT---------RIVE----LIKTQKCKCTEDVVL--TVLKAYA 89

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           ++     AL+ F++M    G      KP   +Y+ +++   +   ++KA+      +   
Sbjct: 90  KSKMPNEALDCFQKMEEIFG-----CKPGIRSYNALLNAFIEANLLEKAESFLAYFETVG 144

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + PN+ TY  LI        + EAKGLL  M  + ++P+V S   ++N + K+G + +A 
Sbjct: 145 ILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSAL 204

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF-SYNILING 306
            + D M +  + P+   YN ++DGF   G   + KE++  +    C + +  +YN++ING
Sbjct: 205 EVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMING 264

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
            CK    +E+L ++  +     +  + TY++L  GL ++   + A++++ EM    V  D
Sbjct: 265 LCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVD 324

Query: 367 TCTYRTFIDGLCVRPQVRFTY 387
             TY   ++G C   +++ ++
Sbjct: 325 VVTYNALLNGFCRAGKIKESF 345



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
           N L+    +    +  +  F+ + + G  P + +Y+ LIN  CK  + S  +     +L 
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
             + P+++T++ L+ GLC   +I  A  L+ ++   G EP+V  +N L++GLC  G    
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           AL L+  M   N        PN VT++ ++DGL K    + A  ++  M      P++++
Sbjct: 588 ALLLYSNMKQSN------CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIIS 641

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           Y   + G C     ++   L  + +  G+ P  ++  +++  + K G +D+ S
Sbjct: 642 YNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 89/167 (53%), Gaps = 8/167 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++++L+  L + K  D  L+L++++   GL PD+  ++IL++  C  G++    ++
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLL 591

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  + +S   PN+VT  +L+ GL        A+ ++  +   G +P++I+YN  + GLC 
Sbjct: 592 YSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCS 651

Query: 129 TGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
            G     + LF + + NG         P ++T+ I++  + K G +D
Sbjct: 652 CGRISDGIALFDDALKNG-------ILPTSITWYILVRAVLKLGPLD 691


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 183/371 (49%), Gaps = 10/371 (2%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V  +  LL  L + +     +  FKR       P LY+++I+I CFC +      +   G
Sbjct: 44  VYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLG 103

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+V  +  ++KG C   R+  A   F K+    C+PNV TYNT+INGLC+ G
Sbjct: 104 YMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFG 162

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
               A++LF  + +       +  P+  TYS ++ GLC+   ++ A +++  M   N + 
Sbjct: 163 KIDWAVHLFTRLPHD------LVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDG 216

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK-NGKMDNASRL 249
           +   Y ++  GFC     +EA  +L  M+ +  +P+VV+ N I+N +C+   +++ A RL
Sbjct: 217 DAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRL 276

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
              MV  D  PNA TY T++ G     ++ R  ELF  M   G   D ++Y+ LI  + K
Sbjct: 277 FQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVK 336

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQ--AERALKLFVEMQGNDVAADT 367
            ++++EA S+  +     + P V  Y TL  G    R+   + AL LF  M+   V  + 
Sbjct: 337 VRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNV 396

Query: 368 CTYRTFIDGLC 378
            TY   + GLC
Sbjct: 397 ITYNIVLRGLC 407



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 187/372 (50%), Gaps = 10/372 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF I++ C    ++          + S+G+ PD+  Y++++  +C +G+V    + 
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG++ ++C  PNV T+ ++I GLC   +I  A  LFT+L     +P+  TY+TL++GLC+
Sbjct: 137 FGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A+ ++  M   N      +  +   Y+ + DG CKE  VD+A E+   M     
Sbjct: 196 AERLEAAIKVYDMMLEAN------YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRC 249

Query: 189 NPNVVTYTSLIHGFC-HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+VVTY  +I+G C + N   EA  L  +MV     PN V+   ++  L K  ++    
Sbjct: 250 KPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCL 309

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            L   M +  + P+ + Y++L+  F    K++  K +           D + Y  LI+GY
Sbjct: 310 ELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGY 369

Query: 308 CKNKE--VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
           C+ ++  V+EAL L+  +  + + P V+TYN +  GL +  + + A ++F EM     + 
Sbjct: 370 CRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSP 429

Query: 366 DTCTYRTFIDGL 377
           +  T++    G+
Sbjct: 430 NRMTFKVMTMGM 441



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 9/322 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N ++  L K    D  + LF RL    + PD +TYS L++  C+  ++     +
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +L + +  +   + ++  G C E R+ EA  +   +    C+P+V+TYN +ING+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQ 265

Query: 129 TGHTI-VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
             + I  A  LF++M      +G    PN VTY  +I GL K   V +  ELF  M    
Sbjct: 266 YKNRIEEAYRLFQQM------VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG 319

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK--MDN 245
           L+P+   Y SLI+ F      +EAK +L +     V P+V     +++  C+  K  +D 
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           A  L   M    V PN  TYN ++ G C TG+ +   ++F  M  + C  +  ++ ++  
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTM 439

Query: 306 GYCKNKEVEEALSLYNELPFKG 327
           G    ++ ++   ++ ++ +KG
Sbjct: 440 GMIHCRKTDKFERIFMDMVYKG 461



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 35/260 (13%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           ++ +   Y+ ++  L +     +A   F +    +  P++ ++T +I  FC+  +   A 
Sbjct: 40  YRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAW 99

Query: 213 GLLIEMVDQGVQPNVVSSNVIM----------------------------------NELC 238
             L  M   G+ P+V + NV++                                  N LC
Sbjct: 100 RYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKTCKPNVATYNTVINGLC 159

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K GK+D A  L   +    V P+ FTY+TL+ G C   ++    +++  M       D  
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR-QAERALKLFVE 357
           +YN + +G+CK + V+EAL +   +  +  KP+VVTYN + +G+ + + + E A +LF +
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M G+D   +  TY T I GL
Sbjct: 280 MVGSDCPPNAVTYGTMILGL 299



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 6/211 (2%)

Query: 176 AKELF-LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           A++ F    K E    +V  YT L+H    A    EA       +    +P++ S  +I+
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG-- 292
              C       A R L  M    + P+   YN ++ G+C  G++ R     +    MG  
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA---LIKFGKMGKT 143

Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
           CK +  +YN +ING CK  +++ A+ L+  LP   + P   TY+TL HGL +  + E A+
Sbjct: 144 CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAI 203

Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           K++  M   +   D   Y    DG C   +V
Sbjct: 204 KVYDMMLEANYDGDAGAYNAMADGFCKERRV 234



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   ++  ++  L+K       L LFK ++  GL PD Y Y  LI  F K+ ++     
Sbjct: 286 PPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKS 345

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLC--AESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           I     R+   P+V  +T+LI G C   + R+ EA  LF  +K     PNVITYN ++ G
Sbjct: 346 ILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRG 405

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+TG    A  +F+EM        V   PN +T+ ++  G+      DK + +F+ M Y
Sbjct: 406 LCKTGRFDEAYQIFQEM------FKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVY 459

Query: 186 E 186
           +
Sbjct: 460 K 460


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 187/380 (49%), Gaps = 8/380 (2%)

Query: 1   MRHMHPSPPPVSS--FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
           +R++H +  P++S  FN ++    K       L + + + S G+ PD+Y+YSILIN FC 
Sbjct: 379 IRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCG 438

Query: 59  MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
            G V     +   +  S   P++V++TSLI GLC ++ +  A  +F  + A  C+ +   
Sbjct: 439 KGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTV 498

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           Y TLI+G C  G    A+ L +EM            P   +   +I G  K G  D+A E
Sbjct: 499 YETLIDGFCMQGDMDSAIKLLEEMICNE------LVPTAFSCRSLIRGYYKLGLFDQALE 552

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           +F  M  + + P+ +    ++ G C A  + EA  LL +  + G   N  S N I+ +LC
Sbjct: 553 VFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLC 612

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K G  + A  LL  M++ +V P+   Y+TL+ GF       R   LF  M  +G   +  
Sbjct: 613 KEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIA 672

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y IL++ +  + ++ EA  ++ E+  +G+    ++Y TL  G    R+ ++A  LF EM
Sbjct: 673 TYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEM 732

Query: 359 QGNDVAADTCTYRTFIDGLC 378
                + +  TY   IDG C
Sbjct: 733 SREGCSPNVITYTCIIDGFC 752



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 189/374 (50%), Gaps = 12/374 (3%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P + + N LL CL +    + V  +F+ L   G  P++YTY+I++N +C       G   
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 67  --VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP-NVITYNTLI 123
             VI G+I RS   P VVT+++ I GLC     VEAA +  +   +  +P N  ++N +I
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGN-VEAALMLIRNLHYTNQPLNSHSFNDVI 398

Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
            G C+ G    AL + +EM +     G++  P+  +YSI+I+  C +G V K  +L  +M
Sbjct: 399 YGFCKRGEVFEALQVLEEMKSS----GIL--PDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
           ++  + P++V+YTSLIHG C  N    A  +   +     + +      +++  C  G M
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           D+A +LL+ M+  ++ P AF+  +L+ G+   G  ++  E+F +M   G   D  + N +
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
           ++G C+    +EAL+L  +    G      +YN + + L +    ERAL+L   M   +V
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNV 632

Query: 364 AADTCTYRTFIDGL 377
                 Y T I G 
Sbjct: 633 LPSVVNYSTLISGF 646



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 173/370 (46%), Gaps = 7/370 (1%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           M H    P  VS  +++ G   KN   + V  +F  + +     D   Y  LI+ FC  G
Sbjct: 452 MEHSQIKPSIVSYTSLIHGLCKKNMLQNAV-DIFHSIGASSCKYDSTVYETLIDGFCMQG 510

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
            +     +   ++ +   P   +  SLI+G        +A  +F  +   G  P+ I  N
Sbjct: 511 DMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACN 570

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +++G CR G+   AL L ++           F  N  +Y+ II  LCKEG+ ++A EL 
Sbjct: 571 YILDGSCRAGYFKEALTLLEDFQEHG------FNLNPHSYNAIIYKLCKEGYPERALELL 624

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M   N+ P+VV Y++LI GF   +++  A  L   MV  G+  N+ +  ++M+    +
Sbjct: 625 PRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHS 684

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
            KM  A  +   M +  +  +  +Y TL+ GFC   ++ +   LF  M   GC  +  +Y
Sbjct: 685 HKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITY 744

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
             +I+G+CK+  ++ A  +++++    + P VVTY  L     +    ++A KL+  M+ 
Sbjct: 745 TCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKD 804

Query: 361 NDVAADTCTY 370
             V  D  T+
Sbjct: 805 KGVLPDDITH 814



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 12/336 (3%)

Query: 48  TYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL 107
            + +LI+ F     +     +F         P++ T   L+K L   +R+     +F +L
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308

Query: 108 KAFGCEPNVITYNTLINGLCR-----TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI 162
           K  G  PN+ TY  ++N  C       G    A+ L K   +G        KP  VTYS 
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGE-------KPTVVTYST 361

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
            I GLCK G V+ A  L   + Y N   N  ++  +I+GFC   +  EA  +L EM   G
Sbjct: 362 YIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSG 421

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
           + P+V S ++++N  C  G +     L++ M    ++P+  +Y +L+ G C    +    
Sbjct: 422 ILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAV 481

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
           ++F S+ +  CK+D   Y  LI+G+C   +++ A+ L  E+    + PT  +  +L  G 
Sbjct: 482 DIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGY 541

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +++   ++AL++F  M  + +  DT      +DG C
Sbjct: 542 YKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSC 577



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 145/311 (46%), Gaps = 6/311 (1%)

Query: 28  DTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSL 87
           D+ + L + +    L P  ++   LI  + K+G       +F  +LR    P+ +    +
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 88  IKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
           + G C      EA  L    +  G   N  +YN +I  LC+ G+   AL L   M   N 
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN- 631

Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                  P+ V YS +I G  K+    +A  LF +M    +  N+ TYT L+  F H++ 
Sbjct: 632 -----VLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHK 686

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA G+  EM ++G+  + +S   ++   C N +M  A  L + M +    PN  TY  
Sbjct: 687 MHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTC 746

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           ++DGFC + +I+    +F  M       D  +Y +LI+ Y K+   ++A  LY+ +  KG
Sbjct: 747 IIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKG 806

Query: 328 IKPTVVTYNTL 338
           + P  +T+N L
Sbjct: 807 VLPDDITHNVL 817



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 13/299 (4%)

Query: 88  IKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
           I G C E++  +   LF+         E + + ++ LI+          AL++F    + 
Sbjct: 218 IVGFCNEAK-YDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKH- 275

Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                V  +P+  T + ++  L +   V+  + +F ++K    +PN+ TYT +++ +C  
Sbjct: 276 -----VGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSD 330

Query: 206 ----NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
                   +A  +L ++   G +P VV+ +  ++ LCK G ++ A  L+  +   +   N
Sbjct: 331 VGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLN 390

Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           + ++N ++ GFC  G++    ++   M+S G   D +SY+ILIN +C   +V + L L  
Sbjct: 391 SHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLME 450

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
           E+    IKP++V+Y +L HGL +    + A+ +F  +  +    D+  Y T IDG C++
Sbjct: 451 EMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 15/195 (7%)

Query: 199 IHGFCHANDWNEAKGLLIEMVD------QGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           I GFC     NEAK    E+        Q V+ + V  +V+++    N  ++NA  +   
Sbjct: 218 IVGFC-----NEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSN 272

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN-- 310
                + P+  T N L+       ++  V+ +F  ++  G   + ++Y I++N YC +  
Sbjct: 273 AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVG 332

Query: 311 --KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               + +A  +  ++   G KPTVVTY+T  HGL ++   E AL L   +   +   ++ 
Sbjct: 333 CDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSH 392

Query: 369 TYRTFIDGLCVRPQV 383
           ++   I G C R +V
Sbjct: 393 SFNDVIYGFCKRGEV 407



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           S+  L+     N+      +LF+ ++  G  P++ TY+ +I+ FCK  ++ L   +F ++
Sbjct: 708 SYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            R    P+VVT+T LI          +A  L+  +K  G  P+ IT+N L
Sbjct: 768 NRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 179/369 (48%), Gaps = 7/369 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++N ++        +D   SL +R  + G  P +  Y+ ++ C  K G++      
Sbjct: 336 PCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRT 395

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  + +   APN+ T+  LI  LC    +  A  +   +K  G  PNV+T N +I+ LC+
Sbjct: 396 FEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCK 454

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A ++F+ M +       +  P+ VT+  +IDGL K+G VD A  L+ QM   + 
Sbjct: 455 AKKLDEACSIFEGMNHK------ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN V YTSLI  F       +   +  EM+ +G  P++   N  M+ + K G+      
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRA 568

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L + +      P+  +Y+ L+ G    G      ELF +M+  GC  D  +YN  I+G+C
Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K+ +V +A  L  E+  KG +PTVVTY ++  GL +I + + A  LF E + N +  +  
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688

Query: 369 TYRTFIDGL 377
            Y + IDG 
Sbjct: 689 IYSSLIDGF 697



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 203/417 (48%), Gaps = 49/417 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V + NI++  L K K  D   S+F+ +N     PD  T+  LI+   K G+V   + +
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499

Query: 69  FGRILRSCFAPNVVTFTSLIK---------------------GLCAESRIVEA------- 100
           + ++L S   PN V +TSLIK                     G   + R++ A       
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFK 559

Query: 101 -------AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
                   ALF ++K+ G  P+V++Y+ LI+GL + G       LF  M     E G V 
Sbjct: 560 AGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK----EQGCVL 615

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
             +T  Y+  IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  
Sbjct: 616 --DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYM 673

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L  E    G++ NVV  + +++   K G++D A  +++ ++Q  + PN +T+N L+D   
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              +IN     F +M+++    +  +Y+ILING C+ ++  +A   + E+  +G+KP  +
Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           TY T+  GL +      A  LF   + N    D+ +Y   I+GL        +Y+RR
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL--------SYSRR 842



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 179/374 (47%), Gaps = 7/374 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+ + C  K    D     F  + S GL PD  TY+ +I   CK  ++     IF ++ 
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           ++   P    + ++I G  +  +  EA +L  + KA GC P+VI YN ++  L + G   
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            AL  F+EM            PN  TY+++ID LCK G V+ A ++   MK   L PNV+
Sbjct: 391 EALRTFEEMKKDAA-------PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM 443

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           T   +I   C A   +EA  +   M  +   P+ V+   +++ L K G++D+A RL + M
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
           +  D  PNA  Y +L+  F   G+     ++F  M   GC  D    N  ++   K  E 
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +  +L+ E+  +G  P V++Y+ L HGL +   A    +LF  M+      DT  Y TF
Sbjct: 564 GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTF 623

Query: 374 IDGLCVRPQVRFTY 387
           IDG C   +V   Y
Sbjct: 624 IDGFCKSGKVNKAY 637



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 166/339 (48%), Gaps = 10/339 (2%)

Query: 33  LFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC 92
           +FK +   G  PDL   +  ++C  K G+   G  +F  I    F P+V++++ LI GL 
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593

Query: 93  AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNGNGEIGV 151
                 E   LF  +K  GC  +   YNT I+G C++G    A  L +EM T G      
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR----- 648

Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
             +P  VTY  +IDGL K   +D+A  LF + K   L  NVV Y+SLI GF      +EA
Sbjct: 649 --QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706

Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
             ++ E++ +G+ PNV + N +++ L K  +++ A      M      PN  TY+ L++G
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILING 766

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
            C   K N+    +  M+  G K +  +Y  +I G  K   + EA SL+      G  P 
Sbjct: 767 LCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPD 826

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTC 368
             +YN +  GL   R+A  A K+F E  M+G ++   TC
Sbjct: 827 SASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTC 865



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 30/399 (7%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N +L CL K       L  F+ +      P+L TY++LI+  CK G+V   F +
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKV 429

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +  +   PNV+T   +I  LC   ++ EA ++F  +    C P+ +T+ +LI+GL +
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489

Query: 129 TGHTIVALNLFKEMTN--------------------GNGEIG-VVFK--------PNTVT 159
            G    A  L+++M +                    G  E G  +FK        P+   
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
            +  +D + K G   K + LF ++K     P+V++Y+ LIHG   A    E   L   M 
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK 609

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           +QG   +  + N  ++  CK+GK++ A +LL+ M     +P   TY +++DG     +++
Sbjct: 610 EQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLD 669

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
               LF   +S G + +   Y+ LI+G+ K   ++EA  +  EL  KG+ P V T+N L 
Sbjct: 670 EAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 729

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
             L +  +   AL  F  M+      +  TY   I+GLC
Sbjct: 730 DALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLC 768



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V S++IL+  L K         LF  +   G   D + Y+  I+ FCK G+V+  + +
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +      P VVT+ S+I GL    R+ EA  LF + K+ G E NV+ Y++LI+G  +
Sbjct: 640 LEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK 699

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +E+            PN  T++ ++D L K   +++A   F  MK    
Sbjct: 700 VGRIDEAYLIMEELMQKG------LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            PN +TY+ LI+G C    +N+A     EM  QG++PN ++   ++  L K G +  AS 
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L +        P++ +YN +++G   + +     ++F      GC     +   L++   
Sbjct: 814 LFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQ 873

Query: 309 KNKEVEEA 316
           K++ +E+A
Sbjct: 874 KDECLEQA 881



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 169/410 (41%), Gaps = 45/410 (10%)

Query: 15  NILLGCLAKNKHYDTVLSLFK---RLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++++G L + K  +  +S F+   R     L P+ Y   +L+    K  +      I G 
Sbjct: 96  DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLV--MAKNVKFDYFEQILGE 153

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
           +  + F P+  T   LI      +++ E   L   ++ F   P    Y TLI  L     
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213

Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
           + + L LF +M     E+ V        ++ +I    +EG +D A  L  +MK   L+ +
Sbjct: 214 SDIMLTLFHQMQELGYEVSVHL------FTTVIRVFAREGRLDAALSLLDEMKSNCLHAD 267

Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
           +V Y   I  F  A   + A     E+   G+ P+ V+   ++  LCK  ++D A  + +
Sbjct: 268 IVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFE 327

Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC------------------ 293
            M Q    P A+ YNT++ G+   GK +    L    ++ GC                  
Sbjct: 328 QMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKG 387

Query: 294 ------------KHDDF----SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
                       K D      +YN+LI+  CK  EVE A  + + +   G+ P V+T N 
Sbjct: 388 RLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447

Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
           +   L + ++ + A  +F  M     + D  T+ + IDGL  + +V   Y
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++  ++  LAK    D    LF+   S GL  ++  YS LI+ F K+G++   ++I
Sbjct: 650 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +++    PNV T+  L+  L     I EA   F  +K     PN ITY+ LINGLCR
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCR 769

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   ++EM           KPNT+TY+ +I GL K G + +A  LF + K    
Sbjct: 770 VRKFNKAFVFWQEMQKQG------LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
            P+  +Y ++I G  ++    EA  +  E   +G   +  +   +++ L K+  ++ A+
Sbjct: 824 VPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAA 882



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 1/238 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           F+P    Y+ +I  L      D    LF QM+      +V  +T++I  F      + A 
Sbjct: 194 FRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAAL 253

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            LL EM    +  ++V  NV ++   K GK+D A +    +    + P+  TY +++   
Sbjct: 254 SLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVL 313

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +++   E+F  ME        ++YN +I GY    + +EA SL      +G  P+V
Sbjct: 314 CKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSV 373

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARR 390
           + YN +   L +  +   AL+ F EM+  D A +  TY   ID LC   +V   +  R
Sbjct: 374 IAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 191/374 (51%), Gaps = 6/374 (1%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           +N+L+  L +N      + +   +   G+  D  TY  L+  FC+  ++ +   +   +L
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
              F P+V + + ++ GL     I +A  L   L   G  PN+   N LI+ LC+     
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  LF+ M N   E      PN VTY+I+I  LCK G +D A  +F +M+ + +   V 
Sbjct: 353 EAERLFRGMANRGLE------PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVY 406

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
            Y SLI+G+C  +++++A+GLL EMV++G+ P+  S + ++  LC+ G + +A  L   M
Sbjct: 407 PYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM 466

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  V  N +T+ TL+ GFC  G ++    LF  M       ++ ++N++I GYC+   V
Sbjct: 467 ARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNV 526

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            +A  LY+++  +G+ P   TY +L   L     A +A +   +++ N V  ++ +  T 
Sbjct: 527 RKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTL 586

Query: 374 IDGLCVRPQVRFTY 387
           + G C   ++  TY
Sbjct: 587 MYGFCKEGRLTETY 600



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+S + ++  L K  H D    L   L  +G+ P+L+  + LI+  CK  +      +
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL 357

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F  +      PN VT+  LI  LC    + +A  +F +++  G    V  YN+LING C+
Sbjct: 358 FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             +   A  L  EM     E G+   P+  +YS +I GLC++G +  A EL  +M    +
Sbjct: 418 HDNFHQARGLLNEMV----EKGLA--PSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           + NV T+T+LI GFC   + +EA  L  +M+D  V PN V+ NV++   C+ G +  A +
Sbjct: 472 SGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D MV   + P+ +TY +L+   CLT    + KE    +E+     + FS   L+ G+C
Sbjct: 532 LYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFC 591

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
           K   + E   +++E+  +G+K  ++++  + +   ++   E+   LF EM+   V  D  
Sbjct: 592 KEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651

Query: 369 TYRTFID 375
            +   ID
Sbjct: 652 FHTCMID 658



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 183/371 (49%), Gaps = 8/371 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N L+  L K++ +     LF+ + + GL P+  TY+ILI+  CK G +     +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+        V  + SLI G C      +A  L  ++   G  P+  +Y+ LI GLCR
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A+ L +EM   NG  G     N  T++ +I G CK+G +D+A  LF +M   ++
Sbjct: 453 KGDLASAMELHREMAR-NGVSG-----NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNAS 247
            PN VT+  +I G+C   +  +A  L  +MVD+G+ P+  +   +++ LC   G M    
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            + DL   C V  N+F+  TLM GFC  G++     ++  M + G K D  S+ +++   
Sbjct: 567 FVDDLENNC-VVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA 625

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
            K  + E+   L+ E+  KG+KP  V +  +     +     +AL  + +M  +  + + 
Sbjct: 626 LKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNV 685

Query: 368 CTYRTFIDGLC 378
            TY   I+ LC
Sbjct: 686 VTYTVLINHLC 696



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 190/401 (47%), Gaps = 42/401 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  +S++ L+  L +     + + L + +   G+  ++YT++ LI+ FCK G +     +
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F +++ S   PN VTF  +I+G C    + +A  L+ ++   G  P+  TY +LI+ LC 
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
           T   + A     ++ N      VV   N+ + + ++ G CKEG + +   ++ +M+   +
Sbjct: 558 TLGAMKAKEFVDDLENN----CVVL--NSFSLTTLMYGFCKEGRLTETYHIWDEMRARGV 611

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP----------------------- 225
             +++++T +++     +D  +   L  EM ++GV+P                       
Sbjct: 612 KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN 671

Query: 226 ------------NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
                       NVV+  V++N LCK+G + +A  L + M+     PN+FTYN  +D   
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G++ + K L  ++   GC  +  ++N LI G+CK  +++ A+ L       G  P  +
Sbjct: 732 NEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           +Y+T+ + L ++    +A +L+ EM    +  D   Y   I
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 182/440 (41%), Gaps = 77/440 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   ++ IL+  L K    D  L +F R+   G+   +Y Y+ LIN +C+         +
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++    AP+  +++ LI GLC +  +  A  L  ++   G   NV T+ TLI+G C+
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+   A  LF +M + +    VV  PN VT++++I+G C+ G V KA +L+ QM    L
Sbjct: 488 DGNMDEAARLFDKMIDSS----VV--PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 189 NPNVVTYTSLI-----------------------------------HGFC---------H 204
            P+  TY SLI                                   +GFC         H
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 205 ANDWNEAKG--------------------------LLIEMVDQGVQPNVVSSNVIMNELC 238
             D   A+G                          L  EM ++GV+P+ V    +++   
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           K   +  A    D M+     PN  TY  L++  C +G ++  + L   M       + F
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN  ++      E+E+A  L+  +  +G     VT+NTL  G  +  Q + A+ L    
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 359 QGNDVAADTCTYRTFIDGLC 378
             +    D  +Y T I+ LC
Sbjct: 781 TESGFFPDCISYSTIINELC 800



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 46/364 (12%)

Query: 39  SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
           S G+    YT S ++    K+ Q +L   +F  +++  F  +   +T+ I+  C    + 
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLD 212

Query: 99  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
            A  L T++++ G                                          K + V
Sbjct: 213 GARGLLTRMESKG-----------------------------------------VKGSAV 231

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
            Y++++ GLC+   V +A E+   M    +  + VTY +L++GFC   +   A  +  +M
Sbjct: 232 PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM 291

Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
           +     P+V S + +++ L K G +D A RL   + +  + PN F  N L+D  C   + 
Sbjct: 292 LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRF 351

Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
              + LF  M + G + ++ +Y ILI+  CK   +++AL +++ +  KGI+ TV  YN+L
Sbjct: 352 REAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSL 411

Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA-----RRKGN 393
            +G  +     +A  L  EM    +A    +Y   I GLC +  +           R G 
Sbjct: 412 INGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471

Query: 394 SGNT 397
           SGN 
Sbjct: 472 SGNV 475



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%)

Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
           +A  +L   +  G+     +++ I+  L K  +   A  L D MVQC    + + Y   +
Sbjct: 143 DAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGI 202

Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
             +C    ++  + L   MES G K     YN+L+ G C+N  V EA+ + N +  +GI 
Sbjct: 203 RAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIV 262

Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
              VTY TL +G     + E AL++  +M          +    +DGL  R  +
Sbjct: 263 ADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 181/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S  N  +  L      D  +   +R+  + + P++ TY+ LI  +C + ++     +
Sbjct: 265 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 324

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLC 127
              +     +P+ +++ +++  LC E RI E   L  K LK     P+ +TYNT ++ L 
Sbjct: 325 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 384

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL   +E           F+ + V YS I+   C+EG +DKAKE+  +M  + 
Sbjct: 385 KHGHGDEALEFLREAEERR------FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 438

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VVTYTS+I+G C     ++AK +L +M   G +PN VS   ++N LCKNG    A 
Sbjct: 439 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 498

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++++  +    PNA TY+ LM GF   GK +   +L   M   G        N+LI   
Sbjct: 499 EMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSL 558

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ ++V+EA     +    G    VV + T+ HG  +    E AL L  +M  ++   D 
Sbjct: 559 CQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 618

Query: 368 CTYRTFIDGL 377
            TY T ID L
Sbjct: 619 VTYTTIIDAL 628



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 180/376 (47%), Gaps = 16/376 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTV-LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP  +S + ++ G L K K    V L + K L    L PD  TY+  ++   K G     
Sbjct: 334 SPDKISYYTVM-GFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEA 392

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                      F  + V +++++   C E R+ +A  +  ++ + GC P+V+TY ++ING
Sbjct: 393 LEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVING 452

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+      A  + ++M           KPNTV+Y+ +++GLCK G   +A+E+    + 
Sbjct: 453 LCQERKVDQAKKMLRQMYKHG------CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEE 506

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   PN +TY+ L+HGF      +EA  L+ EM+ +G  P  V  N+++  LC+  K+D 
Sbjct: 507 DWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 566

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD-FSYNILI 304
           A R ++  +      N   + T++ GFC    +     L   M  +  KH D  +Y  +I
Sbjct: 567 AKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTII 625

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K   +EEA  L  ++   G+ PT VTY T+ H    + + E  LKL  +M    ++
Sbjct: 626 DALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM----LS 681

Query: 365 ADTC--TYRTFIDGLC 378
              C   Y   I+ LC
Sbjct: 682 RQECRTAYNQVIEKLC 697



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 155/344 (45%), Gaps = 15/344 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+ + Y ++   + + G++     +   + ++   P++    + I  L   +R+ +A   
Sbjct: 232 PEAFGYVMV--SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTY 160
             +++    EPNVITYN LI G C       A+ L  EM          FK   P+ ++Y
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMP---------FKGCSPDKISY 340

Query: 161 SIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             ++  LCKE  + + + L  +M K  NL P+ VTY + +H        +EA   L E  
Sbjct: 341 YTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 400

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++  + + V  + I++  C+ G+MD A  +++ M      P+  TY ++++G C   K++
Sbjct: 401 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 460

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K++   M   GCK +  SY  L+NG CKN    EA  + N        P  +TY+ L 
Sbjct: 461 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 520

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           HG     ++  A  L  EM               I  LC   +V
Sbjct: 521 HGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 564



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
           RP AF Y  +M  +   GK+     +   M+  G + D    N  I+       +++A+ 
Sbjct: 231 RPEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 288

Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
               +    I+P V+TYN L  G  ++ + E A++L  EM     + D  +Y T +  LC
Sbjct: 289 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 348

Query: 379 VRPQVR 384
              +++
Sbjct: 349 KEKRIK 354


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLD-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +   +L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++   + G   +A ++F  +T  +       +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN V+ 
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +    ++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++A  L++E+   G+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 183/368 (49%), Gaps = 18/368 (4%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V ++  L+    ++   D  L L   + S+ + PD YTY+ ++   C   +      +  
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMA 214

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            ++R+   PN VTF + I+  C    +  A  L  ++  +GC P+V+ Y+TLING    G
Sbjct: 215 EMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG 274

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
           H   AL+L   M         + KPNTV Y+  + GLC     +   EL  +M  +  +P
Sbjct: 275 HVDQALDLLNTM---------LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
           N  T++ LI   C  N  + A  +L +M   G +P+ V+ N+I+N L + G++D+A RLL
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
           + MV    +P+A  +N ++ GFC   + +   EL   M    C   + ++NILI+  C+N
Sbjct: 386 NSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQN 442

Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
             V  A  ++ ++P     P +VTY++L +G  E    E A++LF  M       D  +Y
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSY 499

Query: 371 RTFIDGLC 378
              + GLC
Sbjct: 500 NAVLKGLC 507



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 174/338 (51%), Gaps = 15/338 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P  ++F++L+  L +N   D+ + + +++   G  PD   Y+I+IN   + G+V     +
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              ++     P+ + F +++KG C   R  +A+ L  ++    C    +T+N LI+ LC+
Sbjct: 385 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQ 441

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  +F++M            P+ VTYS +++G  ++G V+ A +LF  M  +  
Sbjct: 442 NGLVNYATQVFEQMPRYR------CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK-- 493

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P++ +Y +++ G C A  W +A  L+ EMV +   PN V+ N+++N LC+ G +D A  
Sbjct: 494 -PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIE 552

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +L+ M      P+ FTYN L++GF   G+++   +L   + +M CK D  SYN  + G C
Sbjct: 553 VLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGLC 609

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
           + +  ++A  L  E+      P  VT+    H L   R
Sbjct: 610 RAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNR 647



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 185/422 (43%), Gaps = 64/422 (15%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP   +F   +    +N   D  + L  ++   G  PD+  YS LIN F + G V     
Sbjct: 222 PPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALD 281

Query: 68  IFGRIL--------------------------------RSCFAPNVVTFTSLIKGLCAES 95
           +   +L                                R   +PN  TF+ LI  LC  +
Sbjct: 282 LLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNN 341

Query: 96  RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT------------ 143
            +  A  +  +++ +GCEP+ + YN +IN L   G    AL L   M             
Sbjct: 342 LVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVL 401

Query: 144 ----------NGNGEIGVVFKPN----TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
                     + +  I  +F+ +     +T++I+ID LC+ G V+ A ++F QM      
Sbjct: 402 KGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCT 461

Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
           P++VTY+SL++GF        A  L   M     +P++ S N ++  LC+  + ++A  L
Sbjct: 462 PDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGEL 518

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           +  MV  D  PN  T+N L++  C  G ++R  E+   M + G   D F+YN LING+ +
Sbjct: 519 IAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSE 578

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
              +++AL L + +     KP  ++YN+   GL    + + A +L  EM  N    +  T
Sbjct: 579 QGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 635

Query: 370 YR 371
           ++
Sbjct: 636 FK 637



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 44/403 (10%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   ++N +L  L   K ++    L   +      P+  T++  I  FC+ G +   
Sbjct: 185 PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRA 244

Query: 66  FVIFGRILRSCFAPNVVTFTSLI--------------------------------KGLCA 93
             +  ++ R    P+VV +++LI                                KGLC 
Sbjct: 245 VQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCI 304

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
             R  +   L  ++   GC PN  T++ LI+ LC+      A+ + ++M     E     
Sbjct: 305 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE----- 359

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+TV Y+III+ L + G VD A  L   M  +   P+ + + +++ GFC A  W++A  
Sbjct: 360 -PDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASE 415

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           L+ +M         ++ N++++ LC+NG ++ A+++ + M +    P+  TY++L++GF 
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
             G +    +LF    SM CK D FSYN ++ G C+    E+A  L  E+  K   P  V
Sbjct: 476 EQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
           T+N L + L +    +RA+++  +M       D  TY   I+G
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALING 575



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 143/297 (48%), Gaps = 14/297 (4%)

Query: 87  LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
           LIK LCA  R+ +A  +   LKA     + +++NTL+ G CR G    A  +        
Sbjct: 96  LIKKLCATGRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVL------- 147

Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAN 206
           G        N VTY+ +IDG C+ G +D A  L   M    + P+  TY +++ G C A 
Sbjct: 148 GAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAK 204

Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
            W EA+ L+ EM+     PN V+    +   C+NG +D A +LLD M +    P+   Y+
Sbjct: 205 KWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYS 264

Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
           TL++GF   G +++  +L   + +M CK +   YN  + G C  +  E+   L  E+  K
Sbjct: 265 TLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK 321

Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           G  P   T++ L   L +    + A+++  +M+      DT  Y   I+ L  R +V
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRV 378



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P + S+N +L  L +   ++    L   +      P+  T++ILIN  C+ G V   
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
             +  ++      P++ T+ +LI G   + R+ +A  L   L    C+P+ I+YN+ + G
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKG 607

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
           LCR      A  L  EM            PN VT+
Sbjct: 608 LCRAERWQDAEELVAEMLRNK------CTPNEVTF 636


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 196/405 (48%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+    K    D    LFK +   G+ PDL  YS LI+ + K G + +G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 67  ---------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                            V++ R+L    +PNVVT+T LIKGLC 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + RI EA  ++ ++   G EP+++TY++LI+G C+ G+      L+++M      I + +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGY 457

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V Y +++DGL K+G +  A    ++M  +++  NVV + SLI G+C  N ++EA  
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M   G++P+V +   +M      G+++ A  L   M +  + P+A  Y TL+D FC
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K     +LF  M+      D    N++I+   K   +E+A   +N L    ++P +V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNT+  G   +R+ + A ++F  ++      +T T    I  LC
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 186/429 (43%), Gaps = 64/429 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ IL+  L ++        ++ ++   G+ P + TYS LI+ FCK G +  GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           +  +++  + P+VV +  L+ GL  +  ++ A     K+       NV+ +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 129 TGHTIVALNLFKEM--------------------TNGNGEIGV-----VFK----PNTVT 159
                 AL +F+ M                      G  E  +     +FK    P+ + 
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568

Query: 160 YSIIIDGLCKE-----GF------------------------------VDKAKELFLQMK 184
           Y  +ID  CK      G                               ++ A + F  + 
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
              + P++VTY ++I G+C     +EA+ +   +      PN V+  ++++ LCKN  MD
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A R+  +M +   +PNA TY  LMD F  +  I    +LF  M+  G      SY+I+I
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +G CK   V+EA +++++     + P VV Y  L  G  ++ +   A  L+  M  N V 
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808

Query: 365 ADTCTYRTF 373
            D    R  
Sbjct: 809 PDDLLQRAL 817



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 6/318 (1%)

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+ +   +   +L    APNVVTF +LI G C    +  A  LF  ++  G EP++I Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G  + G   +   LF +  +         K + V +S  ID   K G +  A  ++
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKG------VKLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNVVTYT LI G C      EA G+  +++ +G++P++V+ + +++  CK 
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G + +   L + M++    P+   Y  L+DG    G +       V M     + +   +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+G+C+    +EAL ++  +   GIKP V T+ T+        + E AL LF  M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 361 NDVAADTCTYRTFIDGLC 378
             +  D   Y T ID  C
Sbjct: 560 MGLEPDALAYCTLIDAFC 577



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 29/356 (8%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+ C C+ G V     IF    +        +   ++  L    R+   A  F KL   G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211

Query: 112 CEPN-VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF----------------- 153
            EP+ V  +  +++ L   G    AL+  + +      +G+V                  
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271

Query: 154 -----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                       PN VT+  +I+G CK G +D+A +LF  M+   + P+++ Y++LI G+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
             A        L  + + +GV+ +VV  +  ++   K+G +  AS +   M+   + PN 
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY  L+ G C  G+I     ++  +   G +    +Y+ LI+G+CK   +    +LY +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   G  P VV Y  L  GL +      A++  V+M G  +  +   + + IDG C
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 10/324 (3%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F + G I       +V  F  L++  C    + +A  +F      G      +   ++N 
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT-YSIIIDGLCKEGFVDKAKELFLQMK 184
           L  +    +  + F ++  G  E      P+ V+ +  ++D L  +G V KA +    + 
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                  +V+   ++ G    +    A  LL  ++D G  PNVV+   ++N  CK G+MD
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L  +M Q  + P+   Y+TL+DG+   G +    +LF      G K D   ++  I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + Y K+ ++  A  +Y  +  +GI P VVTY  L  GL +  +   A  ++ ++    + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
               TY + IDG C    +R  +A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFA 447



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%)

Query: 6   PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           P  P   +  IL+  L KN   D  + +F  +   G  P+  TY  L++ F K   +   
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F +F  +     +P++V+++ +I GLC   R+ EA  +F +       P+V+ Y  LI G
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785

Query: 126 LCRTGHTIVALNLFKEM 142
            C+ G  + A  L++ M
Sbjct: 786 YCKVGRLVEAALLYEHM 802



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 60/116 (51%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           S P   ++  L+   +K+   +    LF+ +   G+ P + +YSI+I+  CK G+V    
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
            IF + + +   P+VV +  LI+G C   R+VEAA L+  +   G +P+ +    L
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 172/332 (51%), Gaps = 6/332 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N ++  L K   Y     +   + +IGL PD  TY+ L+   C+    S    I
Sbjct: 34  PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 93

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           FG +LR    P++V+F+SL+        + +A   F  +K FG  P+ + Y  L++G CR
Sbjct: 94  FGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 153

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G+ + AL +  EM     E G V   + + Y+ I++GLCKE  +  A +LF +M     
Sbjct: 154 NGNMLEALKIRDEML----EQGCVL--DVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P+  T+T+LIHG C   +  +A  L   M  + ++P++V+ N +++  CK G+M+ AS 
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   + PN  TY  L++ +C  G ++    L+  M   G K    + N +I GYC
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
           ++ +  +A      +  KG+ P  ++YNTL +
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 186/363 (51%), Gaps = 6/363 (1%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+G   +    +    +   +   GL P L+TY+ +IN  CK G+ +    I   +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           L    +P+  T+ +L+   C      EA  +F ++   G  P+++++++L+    R  H 
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL  F++M     + G+V  P+ V Y++++ G C+ G + +A ++  +M  +    +V
Sbjct: 123 DQALVYFRDMK----KFGLV--PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 176

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           + Y ++++G C      +A  L  EMV++G  P+  +   +++  C++G M  A  L   
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
           M Q +++P+   YNTL+DGFC  G++ +  EL+  M S     +  +Y ILIN YC    
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
           V EA  L++ +  KGIKPT+VT NT+  G      + +A +    M    VA D  +Y T
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 373 FID 375
            I+
Sbjct: 357 LIN 359



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 6/333 (1%)

Query: 46  LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
           + TY+ LI  +C+ G +   F I   +      P++ T+ ++I GLC + R   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
           ++   G  P+  TYNTL+   CR  +   A  +F EM       GVV  P+ V++S ++ 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ----GVV--PDLVSFSSLMA 114

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              +   +D+A   F  MK   L P+ V YT L+HG+C   +  EA  +  EM++QG   
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           +V++ N I+N LCK   + +A +L D MV+    P+ +T+ TL+ G C  G + +   LF
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M     K D  +YN LI+G+CK  E+E+A  L++ +  + I P  +TY  L +    +
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
                A +L+  M    +     T  T I G C
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 131/257 (50%), Gaps = 29/257 (11%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + SF+ L+   ++N+H D  L  F+ +   GL PD   Y++L++ +C+ G +     I
Sbjct: 104 PDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 163

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +L      +V+ + +++ GLC E  + +A  LF ++   G  P+  T+ TLI+G C+
Sbjct: 164 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 223

Query: 129 TGHTIVALNLFKEMTNGN------------------GEI--------GVVFK---PNTVT 159
            G+   AL+LF  MT  N                  GE+        G++ +   PN +T
Sbjct: 224 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 283

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y I+I+  C  G V +A  L+  M  + + P +VT  ++I G+C + D ++A   L  M+
Sbjct: 284 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343

Query: 220 DQGVQPNVVSSNVIMNE 236
            +GV P+ +S N ++N+
Sbjct: 344 AKGVAPDHISYNTLIND 360



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%)

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +YN LI  YC+   +EEA  + N +  KG+KP++ TYN + +GL +  +  RA  + +EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 359 QGNDVAADTCTYRTFIDGLCVR 380
               ++ DT TY T +   C R
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRR 84


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 36/398 (9%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V +FNI++  L K             +   G+ P + TY+ L+  F   G++    +I  
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +    F P++ T+  ++  +C E R   A+ +  ++K  G  P+ ++YN LI G    G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341

Query: 131 HTIVALNLFKEMTNGN-------------------------------GEIGVVFKPNTVT 159
              +A     EM                                    E G+V   ++VT
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL--DSVT 399

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           Y+I+I+G C+ G   KA  L  +M  + + P   TYTSLI+  C  N   EA  L  ++V
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
            +G++P++V  N +M+  C  G MD A  LL  M    + P+  TYN LM G C  GK  
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
             +EL   M+  G K D  SYN LI+GY K  + + A  + +E+   G  PT++TYN L 
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            GL + ++ E A +L  EM+   +  +  ++ + I+ +
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 9/382 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   + N +L  L++    +     +  +  + +  ++YT++I+IN  CK G++      
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            G +      P +VT+ +L++G     RI  A  + +++K+ G +P++ TYN +++ +C 
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            G    A  + +EM     EIG+V  P++V+Y+I+I G    G ++ A     +M  + +
Sbjct: 308 EGR---ASEVLREMK----EIGLV--PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TY +LIHG    N    A+ L+ E+ ++G+  + V+ N+++N  C++G    A  
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           L D M+   ++P  FTY +L+   C   K     ELF  +   G K D    N L++G+C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
               ++ A SL  E+    I P  VTYN L  GL    + E A +L  EM+   +  D  
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538

Query: 369 TYRTFIDGLCVRPQVRFTYARR 390
           +Y T I G   +   +  +  R
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVR 560



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 11/376 (2%)

Query: 14  FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
           F++L+ C  + +  D  +  F  +   G +P   T + ++    ++ ++   +V +  + 
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 74  RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
           R     NV TF  +I  LC E ++ +A      ++ FG +P ++TYNTL+ G    G   
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  +  EM +        F+P+  TY+ I+  +C EG   +A E+  +MK   L P+ V
Sbjct: 278 GARLIISEMKSKG------FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSV 328

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           +Y  LI G  +  D   A     EMV QG+ P   + N +++ L    K++ A  L+  +
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +  +  ++ TYN L++G+C  G   +   L   M + G +   F+Y  LI   C+  + 
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
            EA  L+ ++  KG+KP +V  NTL  G   I   +RA  L  EM    +  D  TY   
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508

Query: 374 IDGLCVRPQVRFTYAR 389
           + GLC   + +F  AR
Sbjct: 509 MRGLC--GEGKFEEAR 522



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 35/284 (12%)

Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
           NLF E+   +  +      +T+ + +++   C+   VD+A E F  MK +   P   T  
Sbjct: 138 NLFDELVLAHDRLET---KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCN 194

Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
            ++      N    A     +M    ++ NV + N+++N LCK GK+  A   L +M   
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254

Query: 257 DVRPNAFTYNTLMDGFCLTGKIN--------------------------------RVKEL 284
            ++P   TYNTL+ GF L G+I                                 R  E+
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
              M+ +G   D  SYNILI G   N ++E A +  +E+  +G+ PT  TYNTL HGLF 
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
             + E A  L  E++   +  D+ TY   I+G C     +  +A
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLD-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 121/219 (55%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +   +L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +   +M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLC 357



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++   + G   +A ++F  +T  +       +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN V+ 
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D  +Y  LI+G CK  ++E A     ++  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +    ++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 135/282 (47%), Gaps = 12/282 (4%)

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSI 162
           N+ +Y T+I+ LC       A  L + + +  G G    VF          + +   +S 
Sbjct: 12  NLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
           +I    + GF+  A E +   K         T   ++        +    G   E ++ G
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
              ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G ++   
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            L  +M++ G + D ++Y++LING CK  ++++A  L++E+   G+ P  VT+ TL  G 
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            +  + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 196/405 (48%), Gaps = 41/405 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
           P V +F  L+    K    D    LFK +   G+ PDL  YS LI+ + K G + +G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 67  ---------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCA 93
                                            V++ R+L    +PNVVT+T LIKGLC 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           + RI EA  ++ ++   G EP+++TY++LI+G C+ G+      L+++M      I + +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGY 457

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
            P+ V Y +++DGL K+G +  A    ++M  +++  NVV + SLI G+C  N ++EA  
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
           +   M   G++P+V +   +M      G+++ A  L   M +  + P+A  Y TL+D FC
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577

Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
              K     +LF  M+      D    N++I+   K   +E+A   +N L    ++P +V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637

Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           TYNT+  G   +R+ + A ++F  ++      +T T    I  LC
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           Q+ +   +   +L    APNVVTF +LI G C    +  A  LF  ++  G EP++I Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
           TLI+G  + G   +   LF +  +     GV  K + V +S  ID   K G +  A  ++
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHK----GV--KLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
            +M  + ++PNVVTYT LI G C      EA G+  +++ +G++P++V+ + +++  CK 
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
           G + +   L + M++    P+   Y  L+DG    G +       V M     + +   +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
           N LI+G+C+    +EAL ++  +   GIKP V T+ T+        + E AL LF  M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 361 NDVAADTCTYRTFIDGLC--VRPQV 383
             +  D   Y T ID  C  ++P +
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTI 584



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 29/356 (8%)

Query: 52  LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
           L+ C C+ G V     IF    +        +   ++  L    R+   A  F KL   G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211

Query: 112 CEPN-VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF----------------- 153
            EP+ V  +  +++ L   G    AL+  + +      +G+V                  
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271

Query: 154 -----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
                       PN VT+  +I+G CK G +D+A +LF  M+   + P+++ Y++LI G+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
             A        L  + + +GV+ +VV  +  ++   K+G +  AS +   M+   + PN 
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
            TY  L+ G C  G+I     ++  +   G +    +Y+ LI+G+CK   +    +LY +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +   G  P VV Y  L  GL +      A++  V+M G  +  +   + + IDG C
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 10/324 (3%)

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
           F + G I       +V  F  L++  C    + +A  +F      G      +   ++N 
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT-YSIIIDGLCKEGFVDKAKELFLQMK 184
           L  +    +  + F ++  G  E      P+ V+ +  ++D L  +G V KA +    + 
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                  +V+   ++ G    +    A  LL  ++D G  PNVV+   ++N  CK G+MD
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  L  +M Q  + P+   Y+TL+DG+   G +    +LF      G K D   ++  I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           + Y K+ ++  A  +Y  +  +GI P VVTY  L  GL +  +   A  ++ ++    + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
               TY + IDG C    +R  +A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFA 447



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 29/230 (12%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V  + +L+  L+K       +    ++    +  ++  ++ LI+ +C++ +      
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F  +      P+V TFT++++    E R+ EA  LF ++   G EP+ + Y TLI+  C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577

Query: 128 RTGHTIVALNLFKEMTNG---------NGEIGVVFK--------------------PNTV 158
           +     + L LF  M            N  I ++FK                    P+ V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637

Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
           TY+ +I G C    +D+A+ +F  +K     PN VT T LIH  C    W
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKIMIW 687


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 183/370 (49%), Gaps = 6/370 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  +N+L+    +       L L   + + G  P L TY  LIN   K G +     +
Sbjct: 1180 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSL 1239

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
            F  + +  F+PNV  + S+I  LC      +A  +  ++ A GC+P++IT+NTLI GLC 
Sbjct: 1240 FLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCH 1299

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             GH   A +  +E       I     PN ++Y+ +I G C  G +  A +L ++M     
Sbjct: 1300 EGHVRKAEHFLREA------IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1353

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P+VVT+ +LIHG   A   +EA  +  +M ++ V P+V   NV+++ LCK   +  A  
Sbjct: 1354 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKN 1413

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            +L+ M++ +V+P+ F Y TL+DGF  +  +   +++F  ME  G   D  S N +I GYC
Sbjct: 1414 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYC 1473

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            +   + EA+   + +   G  P   TY T+  G  +      AL+   +M       +  
Sbjct: 1474 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVV 1533

Query: 369  TYRTFIDGLC 378
            TY + I+G C
Sbjct: 1534 TYSSLINGYC 1543



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 180/369 (48%), Gaps = 6/369 (1%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V  +N ++  L K +     + + K++ + G  PD+ T++ LI   C  G V      
Sbjct: 1250 PNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1309

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
                +R    PN +++T LI G C    ++ A+ L  ++   G  P+V+T+  LI+GL  
Sbjct: 1310 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1369

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    AL + ++MT        VF P+   Y+++I GLCK+  +  AK +  +M  +N+
Sbjct: 1370 AGKVSEALIVREKMTERQ-----VF-PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             P+   Y +LI GF  + +  +A+ +   M  +G+ P++VS N ++   C+ G M  A  
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
             +  M +    P+ FTY T++ G+   G +N        M    CK +  +Y+ LINGYC
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 309  KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
            K  + + A  L+  +  + + P VVTY  L   LF+  +  RA   F  M  N  + +  
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1603

Query: 369  TYRTFIDGL 377
            T    ++GL
Sbjct: 1604 TLHYLVNGL 1612



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 8/292 (2%)

Query: 87   LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-TNG 145
            L++GLC E R+ E   L       GC P+V+ YN LI+G CR G     L L  EM T G
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKG 1212

Query: 146  NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
                   F P  VTY  +I+ L K+G ++K   LFL+M+    +PNV  Y S+I   C  
Sbjct: 1213 -------FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKC 1265

Query: 206  NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
                +A  +L +M   G  P++++ N ++  LC  G +  A   L   ++ ++ PN  +Y
Sbjct: 1266 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1325

Query: 266  NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
              L+ GFC+ G++    +L V M   G   D  ++  LI+G     +V EAL +  ++  
Sbjct: 1326 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1385

Query: 326  KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            + + P V  YN L  GL + R    A  +  EM   +V  D   Y T IDG 
Sbjct: 1386 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 1437



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 21/349 (6%)

Query: 9    PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
            P V +F  L+  L         L + +++    +FPD+  Y++LI+  CK   +     I
Sbjct: 1355 PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNI 1414

Query: 69   FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
               +L     P+   + +LI G      + +A  +F  ++  G  P++++ N +I G C+
Sbjct: 1415 LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQ 1474

Query: 129  TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
             G    A+     M     ++G +  P+  TY+ +I G  K+G ++ A      M     
Sbjct: 1475 FGMMSEAILCMSNMR----KVGCI--PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 1528

Query: 189  NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             PNVVTY+SLI+G+C   D + A+GL   M  + + PNVV+  +++  L K  K+  A  
Sbjct: 1529 KPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 1588

Query: 249  LLDLMVQCDVRPNAFTYNTLMDGF------------CLTGKINRVKELFVSMESMGCKHD 296
              + M+     PN  T + L++G             C T +++    L V  + +     
Sbjct: 1589 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 1648

Query: 297  D---FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
            D    +YN +I   C++  + EAL   N +  KG  P  +T+ +L +G 
Sbjct: 1649 DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGF 1697



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 125/307 (40%), Gaps = 7/307 (2%)

Query: 78   APNVVTFTSLIKGLCAESRIVEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVAL 136
            AP      +L+        + +A  +  +++  +G  P V   N L+  L        A 
Sbjct: 1073 APTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDAR 1132

Query: 137  NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
             L+ EM      +G     +  +  +++ GLC E  V++  +L          P+VV Y 
Sbjct: 1133 KLYDEM------LGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYN 1186

Query: 197  SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
             LI G+C   D      LL EM  +G  P +V+   ++N L K G ++    L   M + 
Sbjct: 1187 VLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1246

Query: 257  DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
               PN   YN+++D  C      +   +   M + GC  D  ++N LI G C    V +A
Sbjct: 1247 GFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 1306

Query: 317  LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
                 E   + + P  ++Y  L HG     +   A  L VEM G     D  T+   I G
Sbjct: 1307 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1366

Query: 377  LCVRPQV 383
            L V  +V
Sbjct: 1367 LVVAGKV 1373



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 3/232 (1%)

Query: 155  PNTVTYSIIIDGLCKEGFVDKAKEL--FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
            P       ++      G + KA ++   ++ +Y +L P V     L+        W++A+
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSL-PEVTHCNRLLKLLVEQRRWDDAR 1132

Query: 213  GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  EM+ +    +  S+ V++  LC   +++   +L++        P+   YN L+DG+
Sbjct: 1133 KLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGY 1192

Query: 273  CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
            C  G + R   L   ME+ G      +Y  LIN   K  ++E+  SL+ E+  +G  P V
Sbjct: 1193 CRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNV 1252

Query: 333  VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
              YN++   L + R A +A+ +  +M  +    D  T+ T I GLC    VR
Sbjct: 1253 QIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 22/208 (10%)

Query: 18   LGCLAKNKHYDTVLSLFKR---LNSIGLF----------PDLYTYSILINCFCKMGQVSL 64
            +GC+     Y TV+S + +   LN    +          P++ TYS LIN +CK G    
Sbjct: 1491 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDF 1550

Query: 65   GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
               +F  +     +PNVVT+T LI  L  + +++ A   F  +    C PN +T + L+N
Sbjct: 1551 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 1610

Query: 125  GLCR-TGHTIVALNLFKEMTNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDK 175
            GL   T   I ++       +G   + VVFK        P    Y+ II  LC+   + +
Sbjct: 1611 GLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1670

Query: 176  AKELFLQMKYENLNPNVVTYTSLIHGFC 203
            A +   +M  +   PN +T+ SL++GFC
Sbjct: 1671 ALDFKNRMAKKGYVPNPITFLSLLYGFC 1698



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 59/327 (18%)

Query: 14   FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
            +  L+    ++++      +F+ +   G+ PD+ + + +I  +C+ G +S   +    + 
Sbjct: 1430 YATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1489

Query: 74   RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
            +    P+  T+T++I G   +  +  A      +    C+PNV+TY++LING C+TG T 
Sbjct: 1490 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 1549

Query: 134  VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
             A  LF  M            PN VTY+I+I  L K+  V +A   F  M   + +PN V
Sbjct: 1550 FAEGLFANMQ------AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1603

Query: 194  T--------------------------------------------------YTSLIHGFC 203
            T                                                  Y ++I   C
Sbjct: 1604 TLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLC 1663

Query: 204  HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
              N   EA      M  +G  PN ++   ++   C  GK  N   +L    Q +     F
Sbjct: 1664 RHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIF 1723

Query: 264  TYNTLMDGFCLTG---KINRVKELFVS 287
             Y  L D +       +++RV + +++
Sbjct: 1724 RYKFLFDQYATESVCCEVSRVLQQYLA 1750


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 181/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S  N  +  L      D  +   +R+  + + P++ TY+ LI  +C + ++     +
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXEL 261

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLC 127
              +     +P+ +++ +++  LC E RI E   L  K LK     P+ +TYNT ++ L 
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL   +E           F+ + V YS I+   C+EG +DKAKE+  +M  + 
Sbjct: 322 KHGHGDEALEFLREAEERR------FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VVTYTS+I+G C     ++AK +L +M   G +PN VS   ++N LCKNG    A 
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++++  +    PNA TY+ LM GF   GK +   +L   M   G        N+LI   
Sbjct: 436 EMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSL 495

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ ++V+EA     +    G    VV + T+ HG  +    E AL L  +M  ++   D 
Sbjct: 496 CQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 555

Query: 368 CTYRTFIDGL 377
            TY T ID L
Sbjct: 556 VTYTTIIDAL 565



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 178/376 (47%), Gaps = 16/376 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTV-LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP  +S + ++ G L K K    + L + K L    L PD  TY+  ++   K G     
Sbjct: 271 SPDKISYYTVM-GFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEA 329

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                      F  + V +++++   C E R+ +A  +  ++ + GC P+V+TY ++ING
Sbjct: 330 LEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVING 389

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+      A  + ++M           KPNTV+Y+ +++GLCK G   +A+E+    + 
Sbjct: 390 LCQERKVDQAKKMLRQMYKHG------CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEE 443

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
               PN +TY+ L+HGF      +EA  L+ EM+ +G  P  V  N+++  LC+  K+D 
Sbjct: 444 XWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD-FSYNILI 304
           A R ++  +      N   + T++ GFC    +     L   M  +  KH D  +Y  +I
Sbjct: 504 AKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTII 562

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K   +EEA  L  ++   G  PT VTY T+ H    + + E  LKL  +M    ++
Sbjct: 563 DALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM----LS 618

Query: 365 ADTC--TYRTFIDGLC 378
              C   Y   I+ LC
Sbjct: 619 RQECRTAYNQVIEKLC 634



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 161/344 (46%), Gaps = 5/344 (1%)

Query: 37  LNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESR 96
           +   G+ PDL   +  I+      ++        R+      PNV+T+  LIKG C   R
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHR 254

Query: 97  IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
           + +A  L  ++   GC P+ I+Y T++  LC+         L ++M   +  +     P+
Sbjct: 255 LEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLL-----PD 309

Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
            VTY+  +  L K G  D+A E   + +      + V Y++++H FC     ++AK ++ 
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
           EM  +G  P+VV+   ++N LC+  K+D A ++L  M +   +PN  +Y  L++G C  G
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 429

Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
                +E+    E      +  +Y++L++G+ +  +  EA  L  E+  KG  PT V  N
Sbjct: 430 NSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489

Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
            L   L +  + + A +   +   N  A +   + T I G C +
Sbjct: 490 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQK 533



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 1/227 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           ++ + + Y  +++ L K      AK +   M    +      +  ++  +  A     A 
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
             L  M   G++P++   N  ++ L    ++D A R L+ M   ++ PN  TYN L+ G+
Sbjct: 190 RXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGY 249

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE-ALSLYNELPFKGIKPT 331
           C   ++    EL   M   GC  D  SY  ++   CK K ++E  L +   L    + P 
Sbjct: 250 CDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPD 309

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VTYNT  H L +    + AL+   E +      D   Y   +   C
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 237 LCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           L K      A R+L LM +   + RP AF Y  +M  +   GK+         M+  G +
Sbjct: 144 LSKTKLCQGAKRVLRLMAKRRIERRPEAFGY--VMVSYSRAGKLRNAMRXLTMMQKAGIE 201

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D    N  I+       +++A+     +    I P V+TYN L  G  ++ + E A +L
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXEL 261

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             EM     + D  +Y T +  LC   +++
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM +     G+V  PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANVLFDEMLDK----GLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM+ +G++P+  +   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G KP+VVT
Sbjct: 389 NEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 118/219 (53%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +    L P+VV++ +L++G+    D NE   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++   + G   +A ++F  +T          +P+ V+++ +++G  K 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG------LRPSVVSFNTLMNGYIKL 184

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +++   L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D+G+ PN V+ 
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             +++  CKNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  +  TY   I+  C +  V
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +   G++P+VVS N +MN   K G ++   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++    LF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G +N    L 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
          Length = 461

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 183/377 (48%), Gaps = 15/377 (3%)

Query: 11  VSSFNILLGCLAKNKHYDTV--LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           + S N  L  +A++     V   +   R +   + P L+TY ILI C C+ G++ LGF  
Sbjct: 61  IRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAG 120

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLC 127
            G +++  +    + FT L+K LCAE R   A  +   ++   GC P+V +YN L+ GLC
Sbjct: 121 LGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLC 180

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
               +  AL L   M +  G+      P+ V+YS IIDGL KEG  DKA   + +M    
Sbjct: 181 HESRSQEALELLHMMADDGGDC----PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERG 236

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P+VVTY +++   C A   ++A  +L  MV  GV P+ ++ N I++  C +G+   A 
Sbjct: 237 ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            +L+ M    V P+A TY +LMD  C  G+    +++  SM   G K +  +Y+ L++GY
Sbjct: 297 GILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGY 356

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
                + E   L + +  +  K        +  G  ++R  +R       +  N      
Sbjct: 357 ATKGALVEMRDLLDLMQNEAAK--------INSGCSDLRNIDRWTLWVARVLVNSAKPAG 408

Query: 368 CTYRTFIDGLCVRPQVR 384
             ++T  D L  +P V+
Sbjct: 409 TGHKTETDVLTNKPLVK 425



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 6/179 (3%)

Query: 8   PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           PP V S++ ++  L K    D   S +  +   G+ PD+ TY+ ++   CK   +     
Sbjct: 203 PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +  R++++   P+ +T+ S++ G C+  +  EA  +  K+ + G EP+ +TY +L++ LC
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           + G  I A  +   M      I    KPN +TYS ++ G   +G + + ++L   M+ E
Sbjct: 323 KNGRCIEARKILDSM------IKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMQNE 375



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 71/141 (50%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++N ++  L K +  D  + +  R+   G+ PD  TY+ +++ +C  GQ      I
Sbjct: 239 PDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGI 298

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++      P+ VT+TSL+  LC   R +EA  +   +   G +PNVITY+TL++G   
Sbjct: 299 LEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYAT 358

Query: 129 TGHTIVALNLFKEMTNGNGEI 149
            G  +   +L   M N   +I
Sbjct: 359 KGALVEMRDLLDLMQNEAAKI 379


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 192/382 (50%), Gaps = 9/382 (2%)

Query: 9   PPVSSFNIL-LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P   SF  L LGC  + + ++   +L   + + G   D  T ++++  FC+ G+      
Sbjct: 179 PDHRSFRALVLGCCREGR-FEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
           +F R+      PN+V +++ I GLC    + +A  +  ++   G +PNV T+ +LI+GLC
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + G    A  LF ++   +      +KPN  TY+++I G CKEG + +A+ L  +M  + 
Sbjct: 298 KIGWMERAFRLFLKLVKSSS-----YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           L PN  TYT+LIHG C    ++ A  L+ +M  +G  PN+ + N I+   CK GK+  A 
Sbjct: 353 LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAY 412

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           ++L +     +  +  TY  L+   C  G I    +LF  M    C  D  +Y  +I  Y
Sbjct: 413 KVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ +++E++  L+++    G+ PT  TY ++  G   + +   ALK+F  M  +    D+
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDS 532

Query: 368 CTYRTFIDGLCVRPQVRFTYAR 389
            TY   I  LC   + R   AR
Sbjct: 533 ITYGALISSLC--KESRLEEAR 552



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 175/370 (47%), Gaps = 7/370 (1%)

Query: 15  NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
            +++    +   +  V  LF+R++ +G  P++  YS  I+  C+ G V   F +   ++ 
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVG 279

Query: 75  SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTI 133
               PNV T TSLI GLC    +  A  LF KL K+   +PNV TY  +I G C+ G   
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
            A  L   M     E G+   PNT TY+ +I G CK G  D+A EL  +MK E   PN+ 
Sbjct: 340 RAEMLLGRMV----EQGLA--PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIY 393

Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
           TY ++I GFC      EA  +L     QG+  + V+  +++ E CK G +  A  L   M
Sbjct: 394 TYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453

Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
            +    P+  TY T++  +C   ++ + ++LF    S+G      +Y  +I GYC+  ++
Sbjct: 454 AEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKL 513

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             AL ++  +   G  P  +TY  L   L +  + E A  LF  M    +     T  T 
Sbjct: 514 TSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573

Query: 374 IDGLCVRPQV 383
               C R ++
Sbjct: 574 AYEYCRRDKI 583



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 167/333 (50%), Gaps = 7/333 (2%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           +PP + +++  +  L +  +      + + +   GL P++YT++ LI+  CK+G +   F
Sbjct: 247 TPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAF 306

Query: 67  VIFGRILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
            +F ++++ S + PNV T+T +I G C E ++  A  L  ++   G  PN  TY TLI+G
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHG 366

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C+ G    A  L  +M          F PN  TY+ II G CK+G + +A ++      
Sbjct: 367 HCKGGSFDRAFELMNKMKLEG------FLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATS 420

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           + L+ + VTYT LI   C       A  L  +M ++   P++ +   I+   C+  +M+ 
Sbjct: 421 QGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQ 480

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
           + +L D  +   + P   TY +++ G+C  GK+    ++F  M   GC  D  +Y  LI+
Sbjct: 481 SQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALIS 540

Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
             CK   +EEA +L+  +  K + P  VT  TL
Sbjct: 541 SLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 170/374 (45%), Gaps = 22/374 (5%)

Query: 17  LLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSC 76
           LL  +A ++     L+LF+RL+S    PD+     L          +  FV  G +    
Sbjct: 58  LLPSVADSEGSAAALALFRRLSS---RPDMRRLMRLY------ATAATAFVARGNL---- 104

Query: 77  FAPNVVTFTSLIKGLCAES-RIVEAAALFTKLKAFGCEPNVITYNTLIN-GLCRTGHTIV 134
             P        +    AE+ R+ EAA +  +L++ G    V T N ++  GL   G    
Sbjct: 105 --PMAHEAARAMVAAFAEAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAH 162

Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
           A   F  M    G +    +P+  ++  ++ G C+EG  ++A  L   M  +    +  T
Sbjct: 163 AREAFDGMARAAGGV----RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSAT 218

Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
            T ++  FC    +     L   M + G  PN+V+ +  ++ LC+ G +  A  +L+ MV
Sbjct: 219 CTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMV 278

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEV 313
              ++PN +T+ +L+DG C  G + R   LF+ + +S   K +  +Y ++I GYCK  ++
Sbjct: 279 GKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKL 338

Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
             A  L   +  +G+ P   TY TL HG  +    +RA +L  +M+      +  TY   
Sbjct: 339 ARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAI 398

Query: 374 IDGLCVRPQVRFTY 387
           I G C + +++  Y
Sbjct: 399 IGGFCKKGKIQEAY 412



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 6/271 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V ++ +++G   K         L  R+   GL P+  TY+ LI+  CK G     F +
Sbjct: 320 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFEL 379

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
             ++    F PN+ T+ ++I G C + +I EA  +     + G   + +TY  LI   C+
Sbjct: 380 MNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCK 439

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
            GH   AL+LFK+M   +        P+  TY+ II   C++  ++++++LF +     L
Sbjct: 440 QGHITCALDLFKQMAEKSCH------PDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGL 493

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
            P   TYTS+I G+C       A  +   MV  G  P+ ++   +++ LCK  +++ A  
Sbjct: 494 VPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARA 553

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           L + M+   + P   T  TL   +C   KI 
Sbjct: 554 LFETMLDKHLVPCDVTRVTLAYEYCRRDKIT 584



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 9/203 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  ++    + +  +    LF +  SIGL P   TY+ +I  +C++G+++    +
Sbjct: 460 PDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKV 519

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F R+++    P+ +T+ +LI  LC ESR+ EA ALF  +      P  +T  TL    CR
Sbjct: 520 FERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCR 579

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                +A++    +           +    T   ++  L   G +D A      +  ++ 
Sbjct: 580 RDKITIAVSFLDRLDK---------RQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHY 630

Query: 189 NPNVVTYTSLIHGFCHANDWNEA 211
             +  TYTS I+    +N +  A
Sbjct: 631 AVDHATYTSFINSCYESNRYALA 653


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 195/382 (51%), Gaps = 22/382 (5%)

Query: 25  KHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
           K  D    L K +   G+ P ++ Y++++   CK+ ++     +F  +++    PN VT+
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230

Query: 85  TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM-- 142
            +LI G C    I EA     ++K    E N++TYN+L+NGLC +G    A  +  EM  
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290

Query: 143 ----------------TNGNGEIGVV----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
                           +NG G+ G+      + +  TY I+++GLC+ G ++KA+E+  +
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
           +    + P+ ++Y  L++ +C   D  +A     +M ++G++PN ++ N ++++ C+ G+
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410

Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
           +D+A   +  MV+  V P   TYN+L++G+   G   R  E    M+  G K +  SY  
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470

Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           LIN  CK++++ +A  +  ++  +G+ P    YN L      + + + A + F EM  + 
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           + A   TY T I+GL    +V+
Sbjct: 531 IDATLVTYNTLINGLGRNGRVK 552



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 171/333 (51%), Gaps = 13/333 (3%)

Query: 45  DLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
           D  TY IL+N  C++G++     +  +++ +   P+ +++  L+   C E  + +A    
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            +++  G EPN IT+NT+I+  C TG    A    + M     E GV   P   TY+ +I
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLI 437

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
           +G  ++G   +  E   +M    + PNV++Y SLI+  C      +A+ +L +M+ +GV 
Sbjct: 438 NGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN    N+++   C   K+ +A R  D M+Q  +     TYNTL++G    G++ + ++L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F+ M   GC  D  +YN LI+GY K+   ++ L LY+++   GIKPTV T    FH L  
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT----FHPLIY 613

Query: 345 IRQAERAL---KLFVEMQGNDVAADTCTYRTFI 374
             + E  +   K+F EM   D+  D   Y   I
Sbjct: 614 ACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMI 646



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 7/350 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +FN ++    +    D   +  +R+   G+ P + TY+ LIN + + G     F  
Sbjct: 393 PNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEF 452

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + ++   PNV+++ SLI  LC + ++++A  +   +   G  PN   YN LI   C 
Sbjct: 453 LDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCS 512

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A   F EM               VTY+ +I+GL + G V KA++LFLQM  +  
Sbjct: 513 LSKLKDAFRFFDEMIQSG------IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
           NP+V+TY SLI G+  + +  +   L  +M   G++P V + + ++   C+   +    +
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDK 625

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
           +   M+Q D+ P+ F YN ++  +   G + +   L   M   G   D  +YN LI  Y 
Sbjct: 626 MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +++ V E   L +++  KG+ P V TYN L  GL +++    A   + EM
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREM 735



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 36/404 (8%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H H S P  S  N+L  C + +K  D    L+  +   G  P   + + L+         
Sbjct: 81  HAHVSKPFFSD-NLLWLC-SVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHF 138

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                +F  ++ S   P+ V +   ++       + +   L   +   G  P+V  YN +
Sbjct: 139 EKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLV 198

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
           + GLC+      A  LF EM   N        PNTVTY+ +IDG CK G +++A     +
Sbjct: 199 LGGLCKVRRIKDARKLFDEMIQRN------MVPNTVTYNTLIDGYCKVGGIEEALGFKER 252

Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV---------- 232
           MK +N+  N+VTY SL++G C +   ++A+ +L+EM   G  P    S V          
Sbjct: 253 MKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGD 312

Query: 233 ------------------IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCL 274
                             ++N LC+ G+++ A  +L  +V+  V P+  +YN L++ +C 
Sbjct: 313 DGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQ 372

Query: 275 TGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
            G + +       ME  G + +  ++N +I+ +C+  EV+ A +    +  KG+ PTV T
Sbjct: 373 EGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVET 432

Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           YN+L +G  +     R  +   EM    +  +  +Y + I+ LC
Sbjct: 433 YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLC 476



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 156/343 (45%), Gaps = 37/343 (10%)

Query: 84  FTSLIKGLCAESRIV-EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
           F+  +  LC+ S+++ EA  L++ ++  G  P+  + N L+  L  + H    L +F ++
Sbjct: 89  FSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADV 148

Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
            +         +P+ V Y   +        +DK  EL   M  + + P+V  Y  ++ G 
Sbjct: 149 IDSGT------RPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGL 202

Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
           C      +A+ L  EM+ + + PN V+ N +++  CK G ++ A    + M + +V  N 
Sbjct: 203 CKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNL 262

Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMG----------------------------CK 294
            TYN+L++G C +G+++  +E+ + ME  G                             +
Sbjct: 263 VTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIR 322

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D+ +Y IL+NG C+   +E+A  +  +L   G+ P+ ++YN L +   +    ++A+  
Sbjct: 323 IDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILT 382

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRF--TYARRKGNSG 395
             +M+   +  +  T+ T I   C   +V    T+ RR    G
Sbjct: 383 TEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG 425


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H   P    +  L+  L++       L L + +  +G  PD+ T++ +I+  CK+ ++  
Sbjct: 247 HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHD 306

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +  R+L   F P+ +T+  L+ GLC   ++ EA  +  K+      PN    NTLIN
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLIN 362

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           G   +G    A +   E       I   F+P+  TY+I++ GLCKEG +  A++L  +M 
Sbjct: 363 GYVMSGQLKEAQSFLNETM-----INFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
                PNV+TY  L++G C A    EA  +L EM  +G+  N V  N ++  LC+  K+ 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A  LL  M     +P+ FTYN+L+ G C   +I+    LF +M   G   ++ +YN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   +    ++AL+L N++ F+G     +TYN L     ++   E+ L+L+ +M  + + 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 365 ADTCTYRTFIDGLCVRPQV--RFTYARRKGNSG 395
           ADT +    I+GLC   +V   F + R   N G
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 194/407 (47%), Gaps = 48/407 (11%)

Query: 9   PPVSSFNILLGCLAK-NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V +FN ++  L K NK +D    L  R+   G +PD  TY  L++  C++G+++    
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDAT-KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA-- 342

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGL 126
              +IL     PN     +LI G     ++ EA +   + +  FG +P++ TYN L++GL
Sbjct: 343 --RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGL 400

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+ G    A +L  EM+    E      PN +TY+I+++GLCK G +++A  +  +M   
Sbjct: 401 CKEGSLSFARDLVNEMSRRGCE------PNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            L  N V Y  LI   C     + A  LL EM  +G +P++ + N ++  LCK  ++D A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514

Query: 247 SRLL---------------DLMVQCDVRPNAF--------------------TYNTLMDG 271
            RL                + ++   +R  AF                    TYN L+  
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574

Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
           FC  G I +  EL+  M   G   D  S NI+ING CK  +V+ A     +   +G  P 
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
           +VTYN++ +GL ++ + + AL LF  +Q   V  D  TY TFI   C
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 193/381 (50%), Gaps = 11/381 (2%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           MR ++   P   S++++L  L          ++F  + S G+ P ++T+ I++   C   
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232

Query: 61  QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
           +V     +   + +    PN + + +LI  L  ++++ EA  L  ++   GC P+V T+N
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
            +I+GLC+      A  L   M          F P+ +TY  ++ GLC+ G +++A+++ 
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRG------FYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNELCK 239
           +++      PN     +LI+G+  +    EA+  L E M++ G QP++ + N++M+ LCK
Sbjct: 347 IKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
            G +  A  L++ M +    PN  TY  L++G C  G +     +   M + G   +   
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462

Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
           YN LI   C+ ++V  AL+L +E+  KG KP + TYN+L +GL ++ + + A +LF  M 
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 360 GNDVAADTCTYRTFIDGLCVR 380
            +   A+  TY T I  L  R
Sbjct: 523 LDGAVANNVTYNTLIHALLRR 543



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 8/348 (2%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++NIL+  L K         L   ++  G  P++ TY+IL+N  CK G +    ++
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +       N V +  LI  LC + ++  A  L +++   GC+P++ TYN+LI GLC+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
                 A  LF  M   +G +      N VTY+ +I  L + G   KA  L   M +   
Sbjct: 508 VDRIDEAFRLFHNML-LDGAVA-----NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561

Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
             + +TY  LI  FC   +  +   L  +M+  G+  + +S N+++N LCK GK+DNA  
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621

Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
            L   +     P+  TYN++++G C  G+I     LF  ++  G + D F+YN  I+  C
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681

Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFV 356
           K   V +A S +      G  P+ +T+N L + L  ++Q+ +    FV
Sbjct: 682 KEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTL--LKQSNQENNFFV 727



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 180/373 (48%), Gaps = 23/373 (6%)

Query: 18  LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ--VSLGFVIFGRILRS 75
           LG + K K  D    L  ++   G+      + I++  + K GQ   ++  ++  R +  
Sbjct: 122 LGAIGKFKLID---KLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYL 178

Query: 76  C---FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
           C   F    +    L+ G C +     A  +F  + + G  P V T+  ++  LC     
Sbjct: 179 CEPTFKSYDLVLEILVTGNCPQV----ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             A +L ++MT      G V  PN++ Y  +I  L ++  V +A +L  +M      P+V
Sbjct: 235 DSACSLLRDMTKH----GCV--PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
            T+  +IHG C  N  ++A  L+  M+ +G  P+ ++   +++ LC+ GK++ A ++L +
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL-I 347

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF-VSMESMGCKHDDFSYNILINGYCKNK 311
            + C   PN    NTL++G+ ++G++   +     +M + G + D F+YNIL++G CK  
Sbjct: 348 KIPC---PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404

Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
            +  A  L NE+  +G +P V+TY  L +GL +    E A  +  EM    +  ++  Y 
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464

Query: 372 TFIDGLCVRPQVR 384
             I  LC + +V 
Sbjct: 465 CLICALCRKEKVH 477


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 202/464 (43%), Gaps = 87/464 (18%)

Query: 1   MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
           +R +  + PP   +N LL    +    D V +L+K L   G  PD++T + L+      G
Sbjct: 98  LRALGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAG 157

Query: 61  QVSLGFVIF---------------------GR------ILRSCFAPNVVTFTSLIKGLCA 93
           ++ L   +F                     GR      +L +    N+V   +++ G C 
Sbjct: 158 RMDLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCR 217

Query: 94  ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
           E R+ EA  L  +++A G  PNV+T+N  I+ LC+ G  + A  +F +M     E G+  
Sbjct: 218 EGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEA-WEQGLP- 275

Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
           +P+ VT+ +++ G C  G VD+A  L   M+       V +Y   + G        EA+ 
Sbjct: 276 RPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQE 335

Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN---------------------------- 245
           LL EM  +GVQPN  + N+I++ LCK GK  +                            
Sbjct: 336 LLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYC 395

Query: 246 -------ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
                  A+R+LD M Q    PN FTYN L+      G+   V+ L   M   G   D  
Sbjct: 396 SKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTA 455

Query: 299 SYNILINGYCKNKEVEEALS----LYNELPF-------------------KGIKPTVVTY 335
           S NI+I+G C+N ++E A+     ++NE                      K   P  +TY
Sbjct: 456 SCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITY 515

Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV 379
           +TL + L +  + + A K  VEM G D++ D+  Y TFI G C+
Sbjct: 516 STLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCM 559



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 22/381 (5%)

Query: 11  VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
           V S+N  L  L KN        L   +   G+ P+ YTY+I+++  CK G+      +  
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373

Query: 71  RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
            +      P+VVT+TSL+   C++     A  +  ++   GC PN+ TYN L+  L + G
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433

Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
            T     L + M+         +  +T + +IIIDGLC+   ++ A ++   M     N 
Sbjct: 434 RTTEVERLLERMSEKG------YSLDTASCNIIIDGLCRNSKLEMAMDIVDGM----WNE 483

Query: 191 NVVTYTSLIHGFCH-ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
             +    L + F    +D + +K  L         P+ ++ + +MN LCK G+ D A + 
Sbjct: 484 GRLALRRLGNSFVSLVSDSSISKSCL---------PDRITYSTLMNALCKEGRFDEAKKK 534

Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
           L  M+  D+ P++  Y+T + G+C+ GK +   ++   ME   C     SYN+LI G+ +
Sbjct: 535 LVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQE 594

Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
            ++ +E L L +E+  KGI   V+TYN+L           +A+ L  EM  N++  +  +
Sbjct: 595 KQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTS 654

Query: 370 YRTFIDGLCVRPQVRFTYARR 390
           +   I   C      F+ A+R
Sbjct: 655 FGLLIKAFC--KTADFSAAQR 673



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 65/366 (17%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++N+LL  L K      V  L +R++  G   D  + +I+I+  C+  ++ +   I
Sbjct: 417 PNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDI 476

Query: 69  F------GR------------------ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF 104
                  GR                  I +SC  P+ +T+++L+  LC E R  EA    
Sbjct: 477 VDGMWNEGRLALRRLGNSFVSLVSDSSISKSCL-PDRITYSTLMNALCKEGRFDEAKKKL 535

Query: 105 TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIII 164
            ++      P+ + Y+T I+G C  G T +A+ + ++M   +        P+T +Y+++I
Sbjct: 536 VEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS------CNPSTRSYNLLI 589

Query: 165 DGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ 224
            G  ++   D+  +L  +MK + ++ NV+TY SLI  FC     N+A  LL EM+   + 
Sbjct: 590 WGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIV 649

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMV------------------------------ 254
           PNV S  +++   CK      A R+ D+ +                              
Sbjct: 650 PNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELSTYARWIEAKNIL 709

Query: 255 ----QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
               +  +   +F Y  ++ G C   + +    L     + G   D  ++  +I+   ++
Sbjct: 710 ETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSES 769

Query: 311 KEVEEA 316
            +  +A
Sbjct: 770 GKKHDA 775



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 107/281 (38%), Gaps = 40/281 (14%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P   +++ L+  L K   +D        +    + PD   Y   I+ +C  G+ SL   +
Sbjct: 510 PDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKV 569

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              + +    P+  ++  LI G   + +  E   L +++K  G   NV+TYN+LI   C 
Sbjct: 570 LRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCG 629

Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF-------- 180
            G    A+ L  EM            PN  ++ ++I   CK      A+ +F        
Sbjct: 630 RGMVNKAMPLLDEMLQNE------IVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCG 683

Query: 181 -------------------------LQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGL 214
                                    L+   E  ++     Y  +I G C  ++ + A  L
Sbjct: 684 QKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSL 743

Query: 215 LIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
           L   + +G   +  +   +++ L ++GK  +A  L + M++
Sbjct: 744 LKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 181/370 (48%), Gaps = 7/370 (1%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P +S  N  +  L      D  +   +R+  + + P++ TY+ LI  +C + ++     +
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 261

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLC 127
              +     +P+ +++ +++  LC E RI E   L  K LK     P+ +TYNT ++ L 
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321

Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
           + GH   AL   +E           F+ + V YS I+   C+EG +DKAKE+  +M  + 
Sbjct: 322 KHGHGDEALEFLREAEERR------FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
             P+VVTYTS+I+G C     ++AK +L +M   G +PN VS   ++N LCKNG    A 
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435

Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
            ++++  +    PNA TY+ LM GF   GK +   +L   M   G        N+LI   
Sbjct: 436 EMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSL 495

Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
           C+ ++V+EA     +    G    VV + T+ HG  +    E AL L  +M  ++   D 
Sbjct: 496 CQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 555

Query: 368 CTYRTFIDGL 377
            TY T ID L
Sbjct: 556 VTYTTIIDAL 565



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 180/376 (47%), Gaps = 16/376 (4%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTV-LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
           SP  +S + ++ G L K K    V L + K L    L PD  TY+  ++   K G     
Sbjct: 271 SPDKISYYTVM-GFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEA 329

Query: 66  FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
                      F  + V +++++   C E R+ +A  +  ++ + GC P+V+TY ++ING
Sbjct: 330 LEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVING 389

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
           LC+      A  + ++M           KPNTV+Y+ +++GLCK G   +A+E+    + 
Sbjct: 390 LCQERKVDQAKKMLRQMYKHG------CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEE 443

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
           +   PN +TY+ L+HGF      +EA  L+ EM+ +G  P  V  N+++  LC+  K+D 
Sbjct: 444 DWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503

Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD-FSYNILI 304
           A R ++  +      N   + T++ GFC    +     L   M  +  KH D  +Y  +I
Sbjct: 504 AKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTII 562

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   K   +EEA  L  ++   G+ PT VTY T+ H    + + E  LKL  +M    ++
Sbjct: 563 DALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM----LS 618

Query: 365 ADTC--TYRTFIDGLC 378
              C   Y   I+ LC
Sbjct: 619 RQECRTAYNQVIEKLC 634



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 155/344 (45%), Gaps = 15/344 (4%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
           P+ + Y ++   + + G++     +   + ++   P++    + I  L   +R+ +A   
Sbjct: 169 PEAFGYVMV--SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 226

Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK---PNTVTY 160
             +++    EPNVITYN LI G C       A+ L  EM          FK   P+ ++Y
Sbjct: 227 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMP---------FKGCSPDKISY 277

Query: 161 SIIIDGLCKEGFVDKAKELFLQM-KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
             ++  LCKE  + + + L  +M K  NL P+ VTY + +H        +EA   L E  
Sbjct: 278 YTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
           ++  + + V  + I++  C+ G+MD A  +++ M      P+  TY ++++G C   K++
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
           + K++   M   GCK +  SY  L+NG CKN    EA  + N        P  +TY+ L 
Sbjct: 398 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 457

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           HG     ++  A  L  EM               I  LC   +V
Sbjct: 458 HGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 1/227 (0%)

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
           ++ + + Y  +++ L K      AK +   M    +      +  ++  +  A     A 
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            +L  M   G++P++   N  ++ L    ++D A R L+ M   ++ PN  TYN L+ G+
Sbjct: 190 RVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGY 249

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE-LPFKGIKPT 331
           C   ++    EL   M   GC  D  SY  ++   CK K ++E   L  + L    + P 
Sbjct: 250 CDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPD 309

Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            VTYNT  H L +    + AL+   E +      D   Y   +   C
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 356



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 237 LCKNGKMDNASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           L K      A R+L LM +   + RP AF Y  +M  +   GK+     +   M+  G +
Sbjct: 144 LSKTKLCQGAKRVLRLMAKRRIERRPEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIE 201

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            D    N  I+       +++A+     +    I+P V+TYN L  G  ++ + E A++L
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 261

Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
             EM     + D  +Y T +  LC   +++
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291


>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 178/356 (50%), Gaps = 14/356 (3%)

Query: 31  LSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS-CFAPNVVTFTSLIK 89
           + +FK +  IG+ P + T++ L++   K G+ S+   +F  +L +    P+  TF  LI+
Sbjct: 256 IKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIR 315

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G C  S + E    F ++  F C+P+V+TYNTL++GLCR G   +A N+ K M   +  +
Sbjct: 316 GFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNL 375

Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
                PN VTY+ +I G C +  + +A  L  +M    L PN +TY +LI G C A   +
Sbjct: 376 S----PNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 431

Query: 210 EAKGLLIEMV-DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
           + K +L  MV D G  P+  + N ++   C  GK++ A  + + M +  V+P++ TY+ L
Sbjct: 432 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 491

Query: 269 MDGFCLTGKINRVKELF-------VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
           +   C  G   R +E F       + +  +GCK    +YN +    C N + ++A  ++ 
Sbjct: 492 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 551

Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
           +L  +G +    +Y TL  G       E    L V M   D   D  TY   IDGL
Sbjct: 552 QLMKRGTQDP-PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGL 606



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 158/314 (50%), Gaps = 22/314 (7%)

Query: 78  APNVVTFTSLIKGLCAESRIVEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
           +P+VVTF SL+  +    R   A  LF + L  +G  P+  T+N LI G C         
Sbjct: 268 SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 327

Query: 137 NLFKEMTNGNGEIGVVFK--PNTVTYSIIIDGLCKEGFVDKAKELFLQM--KYENLNPNV 192
             FKEM+         FK  P+ VTY+ ++DGLC+ G V  A  +   M  K  NL+PNV
Sbjct: 328 WFFKEMSR--------FKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV 379

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           VTYT+LI G+C   D  EA  LL EMV +G++PN ++ N ++  LC+  K+D    +L+ 
Sbjct: 380 VTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEG 439

Query: 253 MV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
           MV      P+  T NTL+   C  GK+     +F  M  +  + D  +Y++L+   C+  
Sbjct: 440 MVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 499

Query: 312 EVEEALSLYNELPFK-------GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
           +   A   ++EL  K       G KP V  YN +F  L    + ++A ++F ++      
Sbjct: 500 DFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT- 558

Query: 365 ADTCTYRTFIDGLC 378
            D  +Y+T I G C
Sbjct: 559 QDPPSYKTLILGHC 572



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 169/380 (44%), Gaps = 18/380 (4%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKR-LNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
           P V +FN LL  + K         LF   L++ G+ PD YT++ILI  FC    V  GF 
Sbjct: 269 PSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFW 328

Query: 68  IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL--KAFGCEPNVITYNTLING 125
            F  + R    P+VVT+ +L+ GLC   ++  A  +   +  K+    PNV+TY TLI G
Sbjct: 329 FFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRG 388

Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
            C       AL+L  EM +         KPN +TY+ +I GLC+   +DK KE+   M  
Sbjct: 389 YCMKQDMAEALSLLAEMVSRG------LKPNKITYNTLIQGLCEAQKLDKIKEILEGMVG 442

Query: 186 E-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
           +    P+  T  +LI   C      EA  +  +M +  VQP+  + +V++  LC+ G   
Sbjct: 443 DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFR 502

Query: 245 NASRLLDLMVQCDV-------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
            A    D + + ++       +P    YN + +  C  GK  + + +F  +   G + D 
Sbjct: 503 RAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DP 561

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            SY  LI G+C+    E    L   +  +   P   TY  +  GL +      A K   +
Sbjct: 562 PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 621

Query: 358 MQGNDVAADTCTYRTFIDGL 377
           M  +     T  + + +  L
Sbjct: 622 MLKSSHLPTTAIFHSILAAL 641



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 149/322 (46%), Gaps = 15/322 (4%)

Query: 77  FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
            AP++ + T++++ L       +A   F  ++A G   N  +Y  +I  L R+ +   A 
Sbjct: 182 LAPSL-SKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAAR 240

Query: 137 NLF--KEMTNGNGEIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKELFLQM-KY 185
           N     E  +G  E   VFK        P+ VT++ ++  + K G    AK+LF +M   
Sbjct: 241 NFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 300

Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
             + P+  T+  LI GFC  +  +E      EM      P+VV+ N +++ LC+ GK+  
Sbjct: 301 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 360

Query: 246 ASRLLDLMVQ--CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
           A  ++  MV+   ++ PN  TY TL+ G+C+   +     L   M S G K +  +YN L
Sbjct: 361 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 420

Query: 304 INGYCKNKEVEEALSLYNELPFKG-IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
           I G C+ +++++   +   +   G   P   T NTL      + + E A  +F +M    
Sbjct: 421 IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 480

Query: 363 VAADTCTYRTFIDGLCVRPQVR 384
           V  D+ TY   +  LC R   R
Sbjct: 481 VQPDSATYSVLVRSLCQRGDFR 502



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 143/344 (41%), Gaps = 35/344 (10%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLF-PDLYTYSILINCFCKMGQVSLGFVIFGR 71
           ++N L+  L + +  D +  + + +   G F PD  T + LI   C MG++   F +F +
Sbjct: 416 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 475

Query: 72  ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKA-------FGCEPNVITYNTLIN 124
           +      P+  T++ L++ LC       A   F +L          GC+P V  YN +  
Sbjct: 476 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 535

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
            LC  G T  A  +F+++     +       +  +Y  +I G C+EG  +   +L + M 
Sbjct: 536 YLCSNGKTKKAERVFRQLMKRGTQ-------DPPSYKTLILGHCREGTPEAGFDLLVLML 588

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK-- 242
             +  P+  TY  +I G     D   A   L +M+     P     + I+  L +  +  
Sbjct: 589 RRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRI 648

Query: 243 ---MDNASRLLDLMVQCDVRPNAF-------------TYNTLMDGFCLTGKI-NRVKELF 285
              +D ++  + L+ +  ++  AF                 L+   C + K+    K L 
Sbjct: 649 RQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLL 708

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
            S+E       D    + I+G CK  +V EA +LY EL  KG++
Sbjct: 709 FSLEKRQSVDIDMCSTV-ISGLCKAHKVSEAFALYYELVEKGMQ 751



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 13/250 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P V+++N +   L  N        +F++L   G   D  +Y  LI   C+ G    GF +
Sbjct: 525 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTPEAGFDL 583

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
              +LR  F P+  T+  +I GL  +   V A     K+      P    +++++  L  
Sbjct: 584 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 643

Query: 129 -----------TGHTIVALNLFKEMTNGNGEIGVVFKPN-TVTYSIIIDGLCKEGFVDKA 176
                      + HT+  L            IG++++    V    ++  LC+   + +A
Sbjct: 644 KERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEA 703

Query: 177 KELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNE 236
           +++ L    +  + ++   +++I G C A+  +EA  L  E+V++G+Q  +     +   
Sbjct: 704 QKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRIS 763

Query: 237 LCKNGKMDNA 246
           L   G+++ A
Sbjct: 764 LEAEGRLNEA 773



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 45/198 (22%)

Query: 204 HANDWNEAKG---------LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
           H   W EAKG         L+IE++ +    N  + N + +   K+G  ++  ++   M 
Sbjct: 206 HFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNA-ARNFVFSIEKKSGGAESI-KVFKTMK 263

Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
           +  V P+  T+N+L+      G+ +  K+LF                            +
Sbjct: 264 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF----------------------------D 295

Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
           E L  Y      G+ P   T+N L  G       +     F EM       D  TY T +
Sbjct: 296 EMLDTY------GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLV 349

Query: 375 DGLCVRPQVRFTYARRKG 392
           DGLC   +V+  +   KG
Sbjct: 350 DGLCRAGKVKIAHNVVKG 367


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 177/330 (53%), Gaps = 6/330 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K K++  V   ++     G    LY ++IL++ F K G++ L
Sbjct: 95  HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV+F +L+ G      + E   L   ++A G +P+V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM + NG +     PN VT++ +IDG CK G VD A E++ QM 
Sbjct: 215 GLCKESKMDDANELFDEMLD-NGLV-----PNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L+P+++TY +LI+G C   D  +A+ L+ EM  +G++P+ ++   +++  CK G ++
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A      M++ ++R +   Y  L+ G C  G+    +++   M S+G K +  +Y ++I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
           N +CK  +V     L  E+   G  P+VVT
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++    KEG +  A+ +F  +   +L P+VV++ +L++G+    D +E   L   M 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+DG C  G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP  +TY TL 
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    E A +    M   ++  D   Y   I GLC
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 134/265 (50%), Gaps = 6/265 (2%)

Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           +N L++   + G   +A ++F  +T  +       +P+ V+++ +++G  K G +D+   
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWS------LRPSVVSFNTLMNGYIKLGDLDEGFR 192

Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
           L   M+   + P+V TY+ LI+G C  +  ++A  L  EM+D G+ PN V+   +++  C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
           KNG++D A  +   M+   + P+  TYNTL+ G C  G + + ++L   M   G K D  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
           +Y  LI+G CK  ++E A      +  + I+   V Y  L  GL +  ++  A K+  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
               +  +  TY   I+  C +  V
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDV 397



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H F    +   A+ +   +    ++P+VVS N +MN   K G +D   RL + M    
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI+G+CKN  V+ A+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y ++  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 322 CKEGDLETAFEYRK 335



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A  L + + +  G G    VF          + +   +S +I 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   K         T   ++        +    G   E ++ G   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+   K G++  A  + D + +  +RP+  ++NTLM+G+   G ++    L 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M++ G + D ++Y++LING CK  ++++A  L++E+   G+ P  VT+ TL  G  + 
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++ +M    ++ D  TY T I GLC +  ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 179/337 (53%), Gaps = 6/337 (1%)

Query: 5   HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
           H    P  +   +L  L K +++  V   ++ +   G    LY ++IL++ FCK G + +
Sbjct: 101 HKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRV 160

Query: 65  GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
              +F  I +    P+VV++ +L+ G      + E   L + + A G +P+V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220

Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
           GLC+      A  LF EM       G++  PN VT++ +I G CK G VD A E++  M 
Sbjct: 221 GLCKESKMDDANELFDEMLVK----GLI--PNGVTFTTLIXGHCKNGRVDLAMEIYKXML 274

Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
            ++L P+++TY +LI+G C   D  +A  L+ EM  +G++P+  +   +++  CK G +D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 334

Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
            A +    M+Q ++R +   Y  L+ G C  G+    +++   M S+G K D  +Y ++I
Sbjct: 335 TAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMII 394

Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           N +CK  +V +   L  E+   G  P+VVTYN L +G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 58  KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
           K+    L +  +  IL   +  ++  F  L+   C +  I  A ++F  +  +G  P+V+
Sbjct: 119 KLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
           +YNTL+NG  R G       L   M       GV  +P+  TYS++I+GLCKE  +D A 
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLAS----GV--QPDVYTYSVLINGLCKESKMDDAN 232

Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
           ELF +M  + L PN VT+T+LI G C     + A  +   M+ Q + P++++ N ++  L
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292

Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
           CK G +  A  L+D M    ++P+ FTY TL+DG C  G ++   +    M     + DD
Sbjct: 293 CKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDD 352

Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
            +Y  LI+G C+     +A  +  E+   G+KP + TY  + +   +     +  KL  E
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 412

Query: 358 MQGNDVAADTCTYRTFIDG 376
           MQ N       TY   ++G
Sbjct: 413 MQRNGHVPSVVTYNVLMNG 431



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%)

Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
           ++I++   CK+G +  A+ +F  +    L P+VV+Y +L++G+    D +E   L   M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
             GVQP+V + +V++N LCK  KMD+A+ L D M+   + PN  T+ TL+ G C  G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVD 264

Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
              E++  M S     D  +YN LI G CK  ++++A  L +E+  KG+KP   TY TL 
Sbjct: 265 LAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLI 324

Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            G  +    + A K    M   ++  D   Y   I GLC
Sbjct: 325 DGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLC 363



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 6/273 (2%)

Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
           G   ++  +N L++  C+ G   VA ++F  +T          +P+ V+Y+ +++G  + 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG------LRPSVVSYNTLMNGYIRL 190

Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
           G +D+   L   M    + P+V TY+ LI+G C  +  ++A  L  EM+ +G+ PN V+ 
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250

Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMES 290
             ++   CKNG++D A  +   M+   + P+  TYNTL+ G C  G + +   L   M  
Sbjct: 251 TTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSM 310

Query: 291 MGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
            G K D F+Y  LI+G CK  +++ A      +    I+   V Y  L  GL +  ++  
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVD 370

Query: 351 ALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
           A K+  EM    +  D  TY   I+  C +  V
Sbjct: 371 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDV 403



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%)

Query: 198 LIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD 257
           L+H FC   D   A+ +   +   G++P+VVS N +MN   + G +D   RL   M+   
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207

Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
           V+P+ +TY+ L++G C   K++   ELF  M   G   +  ++  LI G+CKN  V+ A+
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAM 267

Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +Y  +  + + P ++TYNTL +GL +    ++A  L  EM    +  D  TY T IDG 
Sbjct: 268 EIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGC 327

Query: 378 CVRPQVRFTYARRK 391
           C    +   +  RK
Sbjct: 328 CKEGDLDTAFKHRK 341



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 12/279 (4%)

Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTN--GNGEIGVVF----------KPNTVTYSIIID 165
           +Y T+I+ LC       A +L + + +  G G    VF          + +   +S +I 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLIT 80

Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQP 225
              + GF+  A E +   +   L     T   ++        +    G   E+++ G   
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPA 140

Query: 226 NVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
           ++   N++M+  CK+G +  A  + D + +  +RP+  +YNTLM+G+   G ++    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
            +M + G + D ++Y++LING CK  ++++A  L++E+  KG+ P  VT+ TL  G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKN 260

Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
            + + A++++  M    +  D  TY T I GLC +  ++
Sbjct: 261 GRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 181/355 (50%), Gaps = 20/355 (5%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINC------------- 55
           P V  +N ++  L K+K       L+  +    ++PD+ TY+ LI               
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96

Query: 56  -FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
            F  +GQ+     +  ++      PN+ TFT+L+ GLC +  + +A  +   +     EP
Sbjct: 97  GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156

Query: 115 NVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
           N++TYN+L++G       +  +N  K++ N     G+   PN  +Y ++I+GLCK   VD
Sbjct: 157 NIVTYNSLMDGY----FLVKEVNKAKQLFNTISLRGMT--PNVRSYKVMINGLCKNKMVD 210

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           +A  LF +M  +N+ P+ V Y SLI G C +    +    + EM D+G   N+++ N ++
Sbjct: 211 EAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLL 270

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           + LCKN ++D A  LL  +    +RPN +TY  L+DG C  G++   +E++  + + G +
Sbjct: 271 DGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQ 330

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
            D   Y ++ING CK   ++EALSL +++      P  VTY      LFE  + E
Sbjct: 331 LDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNE 385



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 166/324 (51%), Gaps = 20/324 (6%)

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN---- 124
              I R    P+VV + ++I  LC +  + +   L++++      P+V+TYNTLI     
Sbjct: 27  LNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLN 86

Query: 125 ----------GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
                     G    G    A+ L  +MT+          PN  T++ ++DGLCK+G V 
Sbjct: 87  FVYIKIRKEYGFSILGQMKEAVGLLNQMTSK------TVTPNIRTFTTLVDGLCKDGEVK 140

Query: 175 KAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
           KA+ +   M  + + PN+VTY SL+ G+    + N+AK L   +  +G+ PNV S  V++
Sbjct: 141 KARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMI 200

Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
           N LCKN  +D A+ L   M   ++ P+   YN+L+DG C + +I  V +    M   G  
Sbjct: 201 NGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQP 260

Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
            +  +YN L++G CKN +V++A++L  ++  +GI+P + TY  L  GL +  +   A ++
Sbjct: 261 ANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEV 320

Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
           + ++       D   Y   I+GLC
Sbjct: 321 YQDLLNKGYQLDARIYTVMINGLC 344



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 173/350 (49%), Gaps = 24/350 (6%)

Query: 44  PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK-------------- 89
           PD+  Y+ +I+  CK   VS G  ++  ++     P+VVT+ +LI               
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96

Query: 90  GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
           G     ++ EA  L  ++ +    PN+ T+ TL++GLC+ G    A N+   M     E 
Sbjct: 97  GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVE- 155

Query: 150 GVVFKPNTVTYSIIIDG--LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
                PN VTY+ ++DG  L KE  V+KAK+LF  +    + PNV +Y  +I+G C    
Sbjct: 156 -----PNIVTYNSLMDGYFLVKE--VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKM 208

Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
            +EA  L  EM  + + P+ V+ N +++ LCK+ ++ +    +  M       N  TYN+
Sbjct: 209 VDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNS 268

Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
           L+DG C   ++++   L   +++ G + + ++Y IL++G CKN  + +A  +Y +L  KG
Sbjct: 269 LLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKG 328

Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
            +     Y  + +GL +    + AL L  +M+ N    D  TY   I  L
Sbjct: 329 YQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRAL 378



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 18/279 (6%)

Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIG----VVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
           + GLC  G    AL     +      +     ++ KP+ V Y+ IID LCK+  V    +
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 179 LFLQMKYENLNPNVVTYTSLIH--------------GFCHANDWNEAKGLLIEMVDQGVQ 224
           L+ +M  + + P+VVTY +LI+              GF       EA GLL +M  + V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 225 PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
           PN+ +   +++ LCK+G++  A  +L +M++  V PN  TYN+LMDG+ L  ++N+ K+L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
           F ++   G   +  SY ++ING CKNK V+EA +L+ E+  K + P  V YN+L  GL +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            R+         EM      A+  TY + +DGLC   QV
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQV 279



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 67/124 (54%)

Query: 3   HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
           H    P  + ++N LL  L KN   D  ++L  ++ + G+ P++YTY+IL++  CK G++
Sbjct: 255 HDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRL 314

Query: 63  SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
                ++  +L   +  +   +T +I GLC E  + EA +L +K++   C P+ +TY   
Sbjct: 315 RDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEIT 374

Query: 123 INGL 126
           I  L
Sbjct: 375 IRAL 378


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 170/335 (50%), Gaps = 6/335 (1%)

Query: 7   SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
           SP    + N L+  L           + K +   GL  D  TY+ LI  FC  G+V   F
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 67  VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
            +   + +    P++ T+  L++GLC   ++ +A  L+ + KA G   N+ TY  ++ G 
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
           C+        NLF E+ +   E+      N++ Y+III   C+ G V  A +L   MK +
Sbjct: 581 CKANRIEDVENLFNELLSKKMEL------NSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634

Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
            + PN  TY+SLIHG C+     +AK L+ EM  +G  PNVV    ++   CK G+MD A
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 694

Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
                 M+  ++ PN FTY  ++DG+C  G + +   L + M+  G   D  +YN+L NG
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNG 754

Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
           +CK  +++ A  + +++  +G+    +TY TL HG
Sbjct: 755 FCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 194/406 (47%), Gaps = 44/406 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + + N  L  L K   ++    +F R+ S G  PD+++++ +IN  CK G++     +
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIEL 242

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
           F ++ +   +PNVVT+  +I GLC   R+  A  L  K+   G +PN+ TY  LINGL  
Sbjct: 243 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGL-- 300

Query: 129 TGHTIVALNLFKEMTNGNGE-IGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
                + LN F ++ +   E IG  F PN V ++ +IDG CK G ++ A ++   M  +N
Sbjct: 301 -----IKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355

Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
           + P  VT  SL+ GFC ++    A+  L E++  G+  +  +   +++ LCK  +  +A 
Sbjct: 356 ITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 415

Query: 248 RLLDLMVQCDVRPNAF-----------------------------------TYNTLMDGF 272
           R   +M+  + RP+                                     T N L+ G 
Sbjct: 416 RFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 475

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C  GK+     +   M   G   D  +YN LI G+C   +VE    L  E+  +GI+P +
Sbjct: 476 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 535

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            TYN L  GL  + + + A+KL+ E + + + ++  TY   ++G C
Sbjct: 536 YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 581



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 169/358 (47%), Gaps = 6/358 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K   Y +     K + S    P     ++L+   CK G+      ++ R+L      +
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
            VT  +LI GLC   ++ EA+ +  ++   G   + ITYN LI G C  G       L +
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           EMT          +P+  TY+ ++ GLC  G +D A +L+ + K   L  N+ TY  ++ 
Sbjct: 525 EMTKRG------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMME 578

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
           G+C AN   + + L  E++ + ++ N +  N+I+   C+NG +  A +LL+ M    + P
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILP 638

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N  TY++L+ G C  G +   K L   M   G   +   Y  LI GYCK  +++ A S +
Sbjct: 639 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 698

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
            E+    I P   TY  +  G  ++   E+A  L ++M+ + +  D  TY    +G C
Sbjct: 699 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFC 756



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 13  SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
           ++N L+         +    L + +   G+ PD+YTY+ L+   C +G++     ++   
Sbjct: 502 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 561

Query: 73  LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
             S    N+ T+  +++G C  +RI +   LF +L +   E N I YN +I   C+ G+ 
Sbjct: 562 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 621

Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
             AL L + M +     G++  PN  TYS +I G+C  G V+ AK L  +M+ E   PNV
Sbjct: 622 AAALQLLENMKSK----GIL--PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675

Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
           V YT+LI G+C     + A+   +EM+   + PN  +  V+++  CK G M+ A+ LL  
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 735

Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
           M +  + P+  TYN L +GFC    ++   ++   M + G   D+ +Y  L++G+
Sbjct: 736 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 6/356 (1%)

Query: 21  LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
           L K+  +     L+ RL   G      T + LI+  C  G++     I   +L      +
Sbjct: 440 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMD 499

Query: 81  VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
            +T+ +LI G C E ++     L  ++   G +P++ TYN L+ GLC  G    A+ L+ 
Sbjct: 500 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWD 559

Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
           E    +G I      N  TY I+++G CK   ++  + LF ++  + +  N + Y  +I 
Sbjct: 560 EF-KASGLIS-----NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIK 613

Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
             C   +   A  LL  M  +G+ PN  + + +++ +C  G +++A  L+D M +    P
Sbjct: 614 AHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP 673

Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
           N   Y  L+ G+C  G+++  +  ++ M S     + F+Y ++I+GYCK   +E+A +L 
Sbjct: 674 NVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL 733

Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
            ++   GI P VVTYN L +G  +    + A K+  +M    +  D  TY T + G
Sbjct: 734 IKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 180/411 (43%), Gaps = 43/411 (10%)

Query: 9   PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
           P + ++  L+  L K   +D V  +   +   G  P++  ++ LI+ +CKMG +     I
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 69  FGRILRSCFAPNVVTFTSLIKGLCAESRIVEA---------------------------- 100
              ++     P  VT  SL++G C   +I  A                            
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407

Query: 101 ------AALFTKLK-AFGCEPNVITYNTLINGLCRTGHTIVALNL-FKEMTNGNGEIGVV 152
                 A  FTK+  +    P+ +    L+ GLC+ G  + A  L F+ +  G+      
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS------ 461

Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
              + VT + +I GLC  G + +A  +  +M    L  + +TY +LI GFC+        
Sbjct: 462 -PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
            L  EM  +G+QP++ + N ++  LC  GK+D+A +L D      +  N  TY  +M+G+
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
           C   +I  V+ LF  + S   + +   YNI+I  +C+N  V  AL L   +  KGI P  
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640

Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
            TY++L HG+  I   E A  L  EM+      +   Y   I G C   Q+
Sbjct: 641 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 47/405 (11%)

Query: 26  HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV----IFGRILRSCFAPNV 81
           H +   +LF   + +G F     + +LI+ +    + +LGF     +F  + R    P++
Sbjct: 128 HIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFR-NLGFSCAVDVFYLLARKGTFPSL 186

Query: 82  VTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKE 141
            T    +  L   +   +   +F  +    C P+V ++  +IN LC+ G    A+ LF +
Sbjct: 187 KTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMK 245

Query: 142 MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHG 201
           M     ++G+   PN VTY+ II+GLC+ G +D A EL  +M  + + PN+ TY +LI+G
Sbjct: 246 ME----KLGI--SPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299

Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
               N +++   +L EM+  G  PNVV  N +++  CK G ++ A ++ D+M+  ++ P 
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359

Query: 262 AFTYNTLMDGFCLTGKI----NRVKELFVS------------------------------ 287
           + T  +LM GFC + +I    N ++E+  S                              
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419

Query: 288 -MESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
            M S   +  D    +L+ G CK+ +  EA  L+  L  KG   + VT N L HGL    
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479

Query: 347 QAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
           +   A ++  EM    +  D  TY   I G C   +V   +  R+
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.140    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,064,411,764
Number of Sequences: 23463169
Number of extensions: 240576875
Number of successful extensions: 913349
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7767
Number of HSP's successfully gapped in prelim test: 4820
Number of HSP's that attempted gapping in prelim test: 658161
Number of HSP's gapped (non-prelim): 83478
length of query: 400
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 255
effective length of database: 8,957,035,862
effective search space: 2284044144810
effective search space used: 2284044144810
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 78 (34.7 bits)