BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015811
(400 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V FN L +AK K Y+ VL+L K++ S G+ +YT SI+INCFC+ ++S F
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC- 127
G+I++ + P+ V F +L+ GLC E R+ EA L ++ G +P +IT NTL+NGLC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 128 ----------------------------------RTGHTIVALNLFKEMTNGNGEIGVVF 153
++G T +A+ L ++M N
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------I 259
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
K + V YSIIIDGLCK+G +D A LF +M+ + +++TY +LI GFC+A W++
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+ + + PNVV+ +V+++ K GK+ A +LL M+Q + PN TYN+L+DGFC
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
++ ++ M S GC D ++NILINGYCK +++ L L+ E+ +G+ V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TYNTL G + + E A KLF EM V D +Y+ +DGLC
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 6/364 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++I++ L K+ D +LF + G D+ TY+ LI FC G+ G + ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
+ +PNVVTF+ LI E ++ EA L ++ G PN ITYN+LI+G C+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A+ + M + + P+ +T++I+I+G CK +D ELF +M + N V
Sbjct: 386 EAIQMVDLMISKGCD------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TY +L+ GFC + AK L EMV + V+P++VS ++++ LC NG+++ A + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + + Y ++ G C K++ +LF S+ G K D +YNI+I+ C+ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
+A L+ ++ +G P +TYN L A A +L EM+ + AD T +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 374 IDGL 377
I+ L
Sbjct: 620 INML 623
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 182/366 (49%), Gaps = 6/366 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++ +L + K+ + L +++ + D YSI+I+ CK G + F +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + F +++T+ +LI G C R + A L + PNV+T++ LI+ +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A L KEM PNT+TY+ +IDG CKE +++A ++ M +
Sbjct: 346 EGKLREADQLLKEMMQRG------IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P+++T+ LI+G+C AN ++ L EM +GV N V+ N ++ C++GK++ A +
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L MV VRP+ +Y L+DG C G++ + E+F +E + D Y I+I+G C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+V++A L+ LP KG+K YN + L +A LF +M A D
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 369 TYRTFI 374
TY I
Sbjct: 580 TYNILI 585
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 12/289 (4%)
Query: 99 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
+A LF + P VI +N L + + +T + L L K+M + +
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG------IAHSIY 124
Query: 159 TYSIIIDGLC---KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
T SI+I+ C K + +++ YE P+ V + +L++G C +EA L+
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYE---PDTVIFNTLLNGLCLECRVSEALELV 181
Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
MV+ G +P +++ N ++N LC NGK+ +A L+D MV+ +PN TY +++ C +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
G+ EL ME K D Y+I+I+G CK+ ++ A +L+NE+ KG K ++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
NTL G + + KL +M ++ + T+ ID ++R
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
D A +LF M P V+ + L + L +M +G+ ++ + ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ K+ A + +++ P+ +NTL++G CL +++ EL M MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
K + N L+NG C N +V +A+ L + + G +P VTY + + + + Q A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
+L +M+ ++ D Y IDGLC
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLC 274
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
K D+A L M+Q P +N L T + V L MES G H ++ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL-FEIRQAERALKLFVEMQG 360
I+IN +C+ +++ A S ++ G +P V +NTL +GL E R +E AL+L M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVE 186
Query: 361 NDVAADTCTYRTFIDGLCVRPQV 383
T T ++GLC+ +V
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKV 209
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 38/77 (49%)
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
+ ++A+ L+ ++ PTV+ +N LF + + +Q E L L +M+ +A T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 372 TFIDGLCVRPQVRFTYA 388
I+ C ++ + ++
Sbjct: 128 IMINCFCRCRKLSYAFS 144
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 233/422 (55%), Gaps = 46/422 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK K +D V+SL +++ +G+ +LYTY+ILINCFC+ Q+SL +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
G++++ + P++VT +SL+ G C RI
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 98 ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M E
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE----- 257
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
N V YS +ID LCK D A LF +M+ + + PNV+TY+SLI C+ W++A
Sbjct: 258 -ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PNVV+ N +++ K GK+ A +L D M++ + P+ FTY++L++GFC
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K +F M S C + +YN LING+CK K ++E + L+ E+ +G+ V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
TY TL HG F+ R + A +F +M + V + TY T +DGLC + V F Y
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 389 RR 390
+R
Sbjct: 497 QR 498
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 180/317 (56%), Gaps = 6/317 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++ ++ L K +H D L+LF + + G+ P++ TYS LI+C C + S + ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PNVVTF +LI E ++VEA L+ ++ +P++ TY++LING C
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A ++F+ M + + F PN VTY+ +I+G CK +D+ ELF +M L N V
Sbjct: 383 EAKHMFELMISKD-----CF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LIHGF A D + A+ + +MV GV PN+++ N +++ LCKNGK++ A + + +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + P +TYN +++G C GK+ +LF S+ G K D YN +I+G+C+
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 314 EEALSLYNELPFKGIKP 330
EEA +L+ ++ G P
Sbjct: 557 EEADALFRKMREDGPLP 573
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 155/313 (49%), Gaps = 10/313 (3%)
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
G +GR F+ + +++ ++ +A LF + P++ +N L++
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLS 93
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
+ + + ++L ++M +G+ N TY+I+I+ C+ + A L +M
Sbjct: 94 AIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
P++VT +SL++G+CH ++A L+ +MV+ G +P+ ++ +++ L + K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
A L+D MVQ +PN TY +++G C G I+ L ME+ + + Y+ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
+ CK + ++AL+L+ E+ KG++P V+TY++L L + A +L +M +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 365 ADTCTYRTFIDGL 377
+ T+ ID
Sbjct: 328 PNVVTFNALIDAF 340
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%)
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
Y ++ H+ ++A GL MV P++ N +++ + K K D L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
+ + N +TYN L++ FC +I+ L M +G + + + L+NGYC K +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
+A++L +++ G +P +T+ TL HGLF +A A+ L M + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 375 DGLCVRPQVRFTY 387
+GLC R + +
Sbjct: 233 NGLCKRGDIDLAF 245
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%)
Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
G F + Y I+ +D A LF M P++ + L+ ++
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
L +M G+ N+ + N+++N C+ ++ A LL M++ P+ T ++L+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
+G+C +I+ L M MG + D ++ LI+G + + EA++L + + +G +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
P +VTY + +GL + + A L +M+ + A+ Y T ID LC
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
IL NG + ++++A+ L+ + P++ +N L + ++++ + + L +MQ
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 362 DVAADTCTYRTFIDGLCVRPQVRFTYA 388
++ + TY I+ C R Q+ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALA 141
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 225/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK K +D V+SL +++ + + LYTY+ILINCFC+ Q+SL +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIV------------------------------ 98
G++++ + P++VT +SL+ G C RI
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 99 -----EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+PN++TY ++NGLC+ G T +ALNL +M E VV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
++ IID LCK VD A LF +M+ + + PNVVTY+SLI C W++A
Sbjct: 263 ------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PN+V+ N +++ K GK A +L D M++ + P+ FTYN+L++GFC
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ ++++ K++F M S C D +YN LI G+CK+K VE+ L+ E+ +G+ V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TY TL GLF + A K+F +M + V D TY +DGLC
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 191/356 (53%), Gaps = 6/356 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
FN ++ L K +H D L+LFK + + G+ P++ TYS LI+C C G+ S + ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PN+VTF +LI E + VEA L+ + +P++ TYN+L+NG C
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A +F+ M + + F P+ VTY+ +I G CK V+ ELF +M + L + V
Sbjct: 383 KAKQMFEFMVSKD-----CF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LI G H D + A+ + +MV GV P++++ +++++ LC NGK++ A + D M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ +++ + + Y T+++G C GK++ +LF S+ G K + +YN +I+G C + +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
+EA +L ++ G P TYNTL + +L EM+ D T
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 201 bits (512), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++ +++ L K D L+L ++ + + D+ ++ +I+ CK V +
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + PNVVT++SLI LC+ R +A+ L + + PN++T+N LI+ +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + A L+ +M I P+ TY+ +++G C +DKAK++F M ++
Sbjct: 343 EGKFVEAEKLYDDM------IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+VVTY +LI GFC + + L EM +G+ + V+ ++ L +G DNA +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ MV V P+ TY+ L+DG C GK+ + E+F M+ K D + Y +I G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K +V++ L+ L KG+KP VVTYNT+ GL R + A L +M+ + ++
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 369 TYRTFI 374
TY T I
Sbjct: 577 TYNTLI 582
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F L+ + + +L K++ + TYN LIN C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +AL L +M + + ++P+ VT S +++G C + A L QM
Sbjct: 132 RRSQISLALALLGKM------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P+ +T+T+LIHG N +EA L+ MV +G QPN+V+ V++N LCK G D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL+ M + + +NT++D C ++ LF ME+ G + + +Y+ LI+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C +A L +++ K I P +VT+N L + + A KL+ +M + D
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 368 CTYRTFIDGLCVRPQV 383
TY + ++G C+ ++
Sbjct: 366 FTYNSLVNGFCMHDRL 381
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP + +++ILL L N + L +F + + D+Y Y+ +I CK G+V G+
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + PNVVT+ ++I GLC++ + EA AL K+K G PN TYNTLI
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 128 RTGHTIVALNLFKEM 142
R G + L +EM
Sbjct: 587 RDGDKAASAELIREM 601
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
Y ++ H ++A GL MV P++V N +++ + K K D L + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
+ ++ +TYN L++ FC +I+ L M +G + + + L+NGYC K +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
+A++L +++ G +P +T+ TL HGLF +A A+ L M + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 375 DGLCVR 380
+GLC R
Sbjct: 233 NGLCKR 238
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%)
Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
G F + Y I+ + +D A LF M P++V + L+ ++
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
L +M + + + N+++N C+ ++ A LL M++ P+ T ++L+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
+G+C +I+ L M MG + D ++ LI+G + + EA++L + + +G +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
P +VTY + +GL + + AL L +M+ + AD + T ID LC
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
IL NG + ++++A+ L+ + P++V +N L + ++++ + + L +MQ
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 362 DVAADTCTYRTFIDGLCVRPQVRFTYA 388
++ TY I+ C R Q+ A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALA 141
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 281 bits (719), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 42/411 (10%)
Query: 4 MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
+H P P V F+ L +AK K YD VL+L K++ G+ +LYT SI+INCFC+ ++
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139
Query: 63 SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------- 97
L F G+I++ + PN +TF++LI GLC E R+
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 98 ----------VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNG 147
EA L K+ +GC+PN +TY ++N +C++G T +A+ L ++M N
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN- 258
Query: 148 EIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
K + V YSIIIDGLCK G +D A LF +M+ + + N++TY LI GFC+A
Sbjct: 259 -----IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
W++ LL +M+ + + PNVV+ +V+++ K GK+ A L M+ + P+ TY +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
L+DGFC +++ ++ M S GC + ++NILINGYCK +++ L L+ ++ +G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ VTYNTL G E+ + A +LF EM V + TY+ +DGLC
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 6/364 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++I++ L K+ D +LF + G+ ++ TY+ILI FC G+ G + ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
+ PNVVTF+ LI E ++ EA L ++ G P+ ITY +LI+G C+ H
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A + M + + PN T++I+I+G CK +D ELF +M + + V
Sbjct: 386 KANQMVDLMVSKGCD------PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TY +LI GFC N AK L EMV + V PN+V+ ++++ LC NG+ + A + + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + + YN ++ G C K++ +LF S+ G K +YNI+I G CK +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
EA L+ ++ G P TYN L A +++KL E++ + D T +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 374 IDGL 377
ID L
Sbjct: 620 IDML 623
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 12/313 (3%)
Query: 75 SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
S F+ +++ ++ + + +A LF + P VI ++ L + + +T +
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC---KEGFVDKAKELFLQMKYENLNPN 191
L L K+M N T SI+I+ C K A +++ YE PN
Sbjct: 107 VLALCKQMELKG------IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE---PN 157
Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
+T+++LI+G C +EA L+ MV+ G +P++++ N ++N LC +GK A L+D
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
MV+ +PNA TY +++ C +G+ EL ME K D Y+I+I+G CK+
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
++ A +L+NE+ KGI ++TYN L G + + KL +M + + T+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 372 TFIDGLCVRPQVR 384
ID ++R
Sbjct: 338 VLIDSFVKEGKLR 350
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP + ++ ILL L N + L +F+++ + D+ Y+I+I+ C +V +
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + P V T+ +I GLC + + EA LF K++ G P+ TYN LI
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
G ++ L +E+ G +T+ I + DG K+ F+D
Sbjct: 590 GDGDATKSVKLIEELK----RCGFSVDASTIKMVIDMLSDGRLKKSFLD 634
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 281 bits (718), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 225/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK K +D V+SL +++ +G+ +LYTY+ILINCFC+ Q+SL +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIV------------------------------ 98
G++++ + P++VT +SL+ G C RI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 99 -----EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M E VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
++ IID LCK VD A LF +M+ + + PNVVTY+SLI C W++A
Sbjct: 188 ------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PN+V+ N +++ K GK A +L D M++ + P+ FTYN+L++GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ ++++ K++F M S C D +YN LI G+CK+K VE+ L+ E+ +G+ V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TY TL GLF + A K+F +M + V D TY +DGLC
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 6/356 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
FN ++ L K +H D L+LFK + + G+ P++ TYS LI+C C G+ S + ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PN+VTF +LI E + VEA L + +P++ TYN+LING C
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A +F+ M + + F P+ TY+ +I G CK V+ ELF +M + L + V
Sbjct: 308 KAKQMFEFMVSKD-----CF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LI G H D + A+ + +MV GV P++++ +++++ LC NGK++ A + D M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ +++ + + Y T+++G C GK++ +LF S+ G K + +YN +I+G C + +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
+EA +L ++ G P TYNTL + +L EM+ D T
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 197/409 (48%), Gaps = 42/409 (10%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M M P ++ ++ G NK + V +L R+ G P+L TY +++N CK G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
+ L F + ++ + +VV F ++I LC + +A LF +++ G PNV+TY+
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
+LI+ LC G A L +M I PN VT++ +ID KEG +A++L
Sbjct: 225 SLISCLCSYGRWSDASQLLSDM------IEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK- 239
M +++P++ TY SLI+GFC + ++AK + MV + P++ + N ++ CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 240 ----------------------------------NGKMDNASRLLDLMVQCDVRPNAFTY 265
+G DNA ++ MV V P+ TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
+ L+DG C GK+ + E+F M+ K D + Y +I G CK +V++ L+ L
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
KG+KP VVTYNT+ GL R + A L +M+ + D+ TY T I
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 6/305 (1%)
Query: 79 PNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL 138
P++ F L+ + + +L K++ G N+ TYN LIN CR +AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 139 FKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL 198
+M + + ++P+ VT S +++G C + A L QM P+ +T+T+L
Sbjct: 68 LGKM------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 199 IHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDV 258
IHG N +EA L+ MV +G QPN+V+ V++N LCK G +D A LL+ M +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
+ +NT++D C ++ LF ME+ G + + +Y+ LI+ C +A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
L +++ K I P +VT+N L + + A KL +M + D TY + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 379 VRPQV 383
+ ++
Sbjct: 302 MHDRL 306
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP + +++ILL L N + L +F + + D+Y Y+ +I CK G+V G+
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + PNVVT+ ++I GLC++ + EA AL K+K G P+ TYNTLI
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 128 RTGHTIVALNLFKEM 142
R G + L +EM
Sbjct: 512 RDGDKAASAELIREM 526
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
MV P++ N +++ + K K D L + M + + N +TYN L++ FC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
I+ L M +G + + + L+NGYC K + +A++L +++ G +P +T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
L HGLF +A A+ L M + TY ++GLC R + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 235/422 (55%), Gaps = 46/422 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ LL +AK +D V+SL +++ ++G+ + YTYSILINCFC+ Q+ L +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAA--------------------------- 101
G++++ + PN+VT +SL+ G C RI EA
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 102 --------ALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
AL ++ A GC+P+++TY ++NGLC+ G T +A NL +M G E GV+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
Y+ IIDGLCK +D A LF +M+ + + PNVVTY+SLI C+ W++A
Sbjct: 259 ------YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + P+V + + +++ K GK+ A +L D MV+ + P+ TY++L++GFC
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K++F M S C D +YN LI G+CK K VEE + ++ E+ +G+ V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCV-----RPQVRFTYA 388
TYN L GLF+ + A ++F EM + V + TY T +DGLC + V F Y
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 389 RR 390
+R
Sbjct: 493 QR 494
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 6/361 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N ++ L K KH D L+LFK + + G+ P++ TYS LI+C C G+ S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ P+V TF++LI E ++VEA L+ ++ +P+++TY++LING C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A +F+ M + + F P+ VTY+ +I G CK V++ E+F +M L
Sbjct: 374 HDRLDEAKQMFEFMVSKH-----CF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N VTY LI G A D + A+ + EMV GV PN+++ N +++ LCKNGK++ A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ + + + + P +TYN +++G C GK+ +LF ++ G K D +YN +I+G+C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ EEA +L+ E+ G P YNTL E + +L EM+ A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 369 T 369
T
Sbjct: 608 T 608
Score = 207 bits (528), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 41/401 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +FN L+ L + ++L R+ + G PDL TY +++N CK G L F +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ + P V+ + ++I GLC + +A LF +++ G PNV+TY++LI+ LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A L +M I P+ T+S +ID KEG + +A++L+ +M ++
Sbjct: 304 YGRWSDASRLLSDM------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK--------- 239
+P++VTY+SLI+GFC + +EAK + MV + P+VV+ N ++ CK
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 240 --------------------------NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
G D A + MV V PN TYNTL+DG C
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
GK+ + +F ++ + ++YNI+I G CK +VE+ L+ L KG+KP VV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
YNT+ G E A LF EM+ + ++ Y T I
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 174/371 (46%), Gaps = 46/371 (12%)
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
+FG +++S P+++ F+ L+ + ++ +L +++ G N TY+ LIN
Sbjct: 67 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126
Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
CR +AL + +M + + ++PN VT S +++G C + +A L QM
Sbjct: 127 CRRSQLPLALAVLGKM------MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
PN VT+ +LIHG N +EA L+ MV +G QP++V+ V++N LCK G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK------------ 294
LL+ M Q + P YNT++DG C ++ LF ME+ G +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 295 -----------------------HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
D F+++ LI+ + K ++ EA LY+E+ + I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FT 386
+VTY++L +G + + A ++F M D TY T I G C +V F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 387 YARRKGNSGNT 397
++G GNT
Sbjct: 421 EMSQRGLVGNT 431
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 149/285 (52%), Gaps = 6/285 (2%)
Query: 93 AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
+E ++ +A ALF ++ P++I ++ L++ + + V ++L ++M N +G+
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
N TYSI+I+ C+ + A + +M PN+VT +SL++G+CH+ +EA
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
L+ +M G QPN V+ N +++ L + K A L+D MV +P+ TY +++G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
C G + L ME + YN +I+G CK K +++AL+L+ E+ KGI+P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
VTY++L L + A +L +M + D T+ ID
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N L+ K K + + +F+ ++ GL + TY+ILI + G + I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++ PN++T+ +L+ GLC ++ +A +F L+ EP + TYN +I G+C+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G +LF ++ GV KP+ V Y+ +I G C++G ++A LF +MK +
Sbjct: 514 AGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN Y +LI D + L+ EM G + + ++ N L +G++D +
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 624
Query: 249 LLDLM 253
LD++
Sbjct: 625 FLDML 629
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP + ++N LL L KN + + +F+ L + P +YTY+I+I CK G+V G+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + P+VV + ++I G C + EA ALF ++K G PN YNTLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
R G + L KEM + G G VT +++ DG + F+D
Sbjct: 583 RDGDREASAELIKEMRSC-GFAGDASTIGLVT-NMLHDGRLDKSFLD 627
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
++A L EMV P+++ + +++ + K K D L + M + N +TY+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
++ FC ++ + M +G + + + + L+NGYC +K + EA++L +++ G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
+P VT+NTL HGLF +A A+ L M D TY ++GLC R +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 104/206 (50%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D A LF +M P+++ ++ L+ N ++ L +M + G+ N + ++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ ++ A +L M++ PN T ++L++G+C + +I+ L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ + ++N LI+G + + EA++L + + KG +P +VTY + +GL + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
L +M+ + Y T IDGLC
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLC 267
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 226/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK +D V+SL +R+ ++ + DLY+Y+ILINCFC+ Q+ L +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL------------------------- 103
G++++ + P++VT +SL+ G C RI EA AL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 104 ----------FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
++ A GC+P++ TY T++NGLC+ G +AL+L K+M G E VV
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
Y+ IID LC V+ A LF +M + + PNVVTY SLI C+ W++A
Sbjct: 258 ------YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PNVV+ + +++ K GK+ A +L D M++ + P+ FTY++L++GFC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K +F M S C + +YN LI G+CK K VEE + L+ E+ +G+ V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TYNTL GLF+ + A K+F +M + V D TY +DGLC
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 191/396 (48%), Gaps = 31/396 (7%)
Query: 9 PPVSSFNILL-GCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
P +FN L+ G NK + V +L R+ + G PDL+TY ++N CK G + L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+ ++ + +VV +T++I LC + +A LFT++ G PNV+TYN+LI LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVV-----------------------------FKPNTV 158
G A L +M VV P+
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
TYS +I+G C +D+AK +F M ++ PNVVTY +LI GFC A E L EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
+G+ N V+ N ++ L + G D A ++ MV V P+ TY+ L+DG C GK+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
+ +F ++ + D ++YNI+I G CK +VE+ L+ L KG+KP V+ Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
G E A LF EM+ + ++ TY T I
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 192/364 (52%), Gaps = 6/364 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+ ++ L K+ + L+LF +++ G+ P++ TY+ LI C C G+ S + ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PNVVTF++LI E ++VEA L+ ++ +P++ TY++LING C
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A ++F+ M + + F PN VTY+ +I G CK V++ ELF +M L N V
Sbjct: 378 EAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TY +LI G A D + A+ + +MV GV P++++ +++++ LCK GK++ A + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + P+ +TYN +++G C GK+ +LF S+ G K + Y +I+G+C+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
EEA +L+ E+ G P TYNTL + +L EM+ D T
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 374 IDGL 377
I+ L
Sbjct: 612 INML 615
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 10/340 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N L+ CL + L + + P++ T+S LI+ F K G++ +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +++ P++ T++SLI G C R+ EA +F + + C PNV+TYNTLI G C+
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ LF+EM+ G +G NTVTY+ +I GL + G D A+++F +M + +
Sbjct: 408 AKRVEEGMELFREMSQ-RGLVG-----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+++TY+ L+ G C +A + + ++P++ + N+++ +CK GK+++
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L + V+PN Y T++ GFC G LF M+ G + +YN LI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 309 KNKEVEEALSLYNELP---FKGIKPTV-VTYNTLFHGLFE 344
++ + + L E+ F G T+ + N L G E
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLE 621
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 6/316 (1%)
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F L+ + ++ +L +++ ++ +YN LIN C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +AL + +M + + ++P+ VT S +++G C + +A L QM
Sbjct: 127 RRSQLPLALAVLGKM------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
PN VT+ +LIHG N +EA L+ MV +G QP++ + ++N LCK G +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL M + + + Y T++D C +N LF M++ G + + +YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C +A L +++ + I P VVT++ L + + A KL+ EM + D
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 368 CTYRTFIDGLCVRPQV 383
TY + I+G C+ ++
Sbjct: 361 FTYSSLINGFCMHDRL 376
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP + +++ILL L K + L +F+ L + PD+YTY+I+I CK G+V G+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + PNV+ +T++I G C + EA ALF ++K G PN TYNTLI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSI--IIDGLCKEGFVD 174
R G + L KEM + G V +T++ I + DG ++ +++
Sbjct: 582 RDGDKAASAELIKEMRS----CGFVGDASTISMVINMLHDGRLEKSYLE 626
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D A +LF +M P++V + L+ N ++ L M + + ++ S N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ ++ A +L M++ P+ T ++L++G+C +I+ L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ + ++N LI+G + + EA++L + + +G +P + TY T+ +GL + + AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
L +M+ + AD Y T ID LC
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALC 266
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
K+D+A L MVQ P+ +N L+ K + V L M+++ +D +SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 302 ILI-----------------------------------NGYCKNKEVEEALSLYNELPFK 326
ILI NGYC K + EA++L +++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+P VT+NTL HGLF +A A+ L M D TY T ++GLC R +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 232/422 (54%), Gaps = 46/422 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK ++ V+SL +++ ++G+ DLYTYSI INCFC+ Q+SL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
++++ + P++VT +SL+ G C RI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 98 ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+P+++TY T++NGLC+ G +AL+L K+M G E VV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
Y+ IIDGLCK +D A LF +M + + P+V TY+SLI C+ W++A
Sbjct: 261 ------YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PNVV+ + +++ K GK+ A +L D M++ + P+ FTY++L++GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K +F M S C + +Y+ LI G+CK K VEE + L+ E+ +G+ V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYA 388
TY TL HG F+ R + A +F +M V + TY +DGLC + V F Y
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 389 RR 390
+R
Sbjct: 495 QR 496
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 6/356 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+N ++ L K KH D L+LF +++ G+ PD++TYS LI+C C G+ S + ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PNVVTF++LI E ++VEA L+ ++ +P++ TY++LING C
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A ++F+ M + + F PN VTYS +I G CK V++ ELF +M L N V
Sbjct: 381 EAKHMFELMISKD-----CF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LIHGF A D + A+ + +MV GV PN+++ N++++ LCKNGK+ A + + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + P+ +TYN +++G C GK+ ELF ++ G + +YN +I+G+C+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
EEA SL ++ G P TYNTL E + +L EM+ A D T
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 182/366 (49%), Gaps = 6/366 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++ ++ L K D LSL K++ + D+ Y+ +I+ CK + +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P+V T++SLI LC R +A+ L + + PNV+T++ LI+ +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + A L+ EM I P+ TYS +I+G C +D+AK +F M ++
Sbjct: 341 EGKLVEAEKLYDEM------IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNVVTY++LI GFC A E L EM +G+ N V+ +++ + DNA
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ MV V PN TYN L+DG C GK+ + +F ++ + D ++YNI+I G C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K +VE+ L+ L KG+ P V+ YNT+ G E A L +M+ + ++
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 369 TYRTFI 374
TY T I
Sbjct: 575 TYNTLI 580
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 20/376 (5%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP V SF L G + + + ++ IL N + +V
Sbjct: 24 PPTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDAVD 69
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F L+ + ++ +L +++ G ++ TY+ IN C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +AL + +M + + ++P+ VT S +++G C + A L QM
Sbjct: 130 RRSQLSLALAVLAKM------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P+ T+T+LIHG N +EA L+ +MV +G QP++V+ ++N LCK G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL M + + + YNT++DG C ++ LF M++ G + D F+Y+ LI+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C +A L +++ + I P VVT++ L + + A KL+ EM + D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 368 CTYRTFIDGLCVRPQV 383
TY + I+G C+ ++
Sbjct: 364 FTYSSLINGFCMHDRL 379
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 9/245 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +++ L+ K K + + LF+ ++ GL + TY+ LI+ F + ++
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F +++ PN++T+ L+ GLC ++ +A +F L+ EP++ TYN +I G+C+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G LF ++ GV PN + Y+ +I G C++G ++A L +MK +
Sbjct: 516 AGKVEDGWELFCNLSLK----GV--SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN TY +LI D + L+ EM G + + ++ N L +G++D +
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 626
Query: 249 LLDLM 253
LD++
Sbjct: 627 FLDML 631
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 51/245 (20%)
Query: 176 AKELFLQMKYENLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
AK LF+ + + P V ++ +L C + A G E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
N L K+D+A L MV+ P+ +N L+ K V L M+++G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 294 KHDDFSYNI-----------------------------------LINGYCKNKEVEEALS 318
HD ++Y+I L+NGYC +K + +A++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
L +++ G KP T+ TL HGLF +A A+ L +M D TY T ++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 379 VRPQV 383
R +
Sbjct: 235 KRGDI 239
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
IL N +V++A+ L+ ++ P++V +N L + ++ + E + L +MQ
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 362 DVAADTCTYRTFIDGLCVRPQVRFTYA 388
++ D TY FI+ C R Q+ A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALA 139
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 277 bits (709), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 232/422 (54%), Gaps = 46/422 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ LL +AK +D V+SL +++ ++G+ +LYTYSILINCFC+ Q+SL +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
++++ + P++VT SL+ G C +RI
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 98 ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+P+++TY ++NGLC+ G +AL+L K+M G E
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE----- 253
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
P V Y+ IID LC V+ A LF +M + + PNVVTY SLI C+ W++A
Sbjct: 254 -PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PNVV+ + +++ K GK+ A +L D M++ + P+ FTY++L++GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K +F M S C + +YN LI G+CK K V+E + L+ E+ +G+ V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
TY TL HG F+ R+ + A +F +M + V D TY +DGLC +V F Y
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 389 RR 390
+R
Sbjct: 493 QR 494
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 197/361 (54%), Gaps = 6/361 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N ++ L K+ + L+LF +++ G+ P++ TY+ LI C C G+ S +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ PNVVTF++LI E ++VEA L+ ++ +P++ TY++LING C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A ++F+ M + + F PN VTY+ +I G CK VD+ ELF +M L
Sbjct: 374 HDRLDEAKHMFELMISKD-----CF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N VTYT+LIHGF A + + A+ + +MV GV P++++ +++++ LC NGK++ A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ + + + + P+ +TYN +++G C GK+ +LF S+ G K + +Y +++G+C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ EEA +L+ E+ +G P TYNTL + +L EM+ D
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607
Query: 369 T 369
T
Sbjct: 608 T 608
Score = 211 bits (537), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 195/401 (48%), Gaps = 41/401 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +FN L+ L ++ ++L R+ G PDL TY I++N CK G + L +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ + P VV + ++I LC + +A LFT++ G PNV+TYN+LI LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A L +M I PN VT+S +ID KEG + +A++L+ +M ++
Sbjct: 304 YGRWSDASRLLSDM------IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P++ TY+SLI+GFC + +EAK + M+ + PNVV+ N ++ CK ++D
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 249 LLDLMVQ----------------------CD-------------VRPNAFTYNTLMDGFC 273
L M Q CD V P+ TY+ L+DG C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
GK+ +F ++ + D ++YNI+I G CK +VE+ L+ L KG+KP VV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
TY T+ G E A LF EM+ D+ TY T I
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 144/282 (51%), Gaps = 6/282 (2%)
Query: 96 RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
++ +A LF + P+++ ++ L++ + + + ++L ++M N +G+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114
Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
N TYSI+I+ C+ + A + +M P++VT SL++GFCH N ++A L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
+MV+ G QP+ + N +++ L ++ + A L+D MV +P+ TY +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
G I+ L ME + YN +I+ C K V +AL+L+ E+ KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
N+L L + A +L +M + + T+ ID
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 6/244 (2%)
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
A+NLF +M P+ V +S ++ + K D L QM+ ++ N+ T
Sbjct: 65 AVNLFGDMVKSRP------FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
Y+ LI+ FC + + A +L +M+ G +P++V+ N ++N C ++ +A L+ MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
+ +P++FT+NTL+ G + + L M GC+ D +Y I++NG CK +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
ALSL ++ I+P VV YNT+ L + AL LF EM + + TY + I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 375 DGLC 378
LC
Sbjct: 299 RCLC 302
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D A LF M P++V ++ L+ N ++ L +M + G+ N+ + ++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ ++ A +L M++ P+ T N+L++GFC +I+ L M MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ D F++N LI+G ++ EA++L + + KG +P +VTY + +GL + + AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
L +M+ + Y T ID LC
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALC 267
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%)
Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
++A L +MV P++V + +++ + K K D L + M + N +TY+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
++ FC +++ + M +G + D + N L+NG+C + +A+SL ++ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+P T+NTL HGLF +A A+ L M D TY ++GLC R +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 40/77 (51%)
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
++++A++L+ ++ P++V ++ L + ++ + + + L +MQ ++ + TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 372 TFIDGLCVRPQVRFTYA 388
I+ C R Q+ A
Sbjct: 121 ILINCFCRRSQLSLALA 137
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 224/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ LL +AK K +D V+S +++ +G+ +LYTY+I+INC C+ Q+S I
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG----------------- 111
G++++ + P++VT SL+ G C +RI EA AL ++ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 112 ------------------CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
C+P+++TY +INGLC+ G +ALNL +M G E VV
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
YS +ID LCK VD A LF +M + + P+V TY+SLI C+ W++A
Sbjct: 243 ------YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PNVV+ N +++ K GK+ A +L D M+Q + PN TYN+L++GFC
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ +++F M S C D +YN LING+CK K+V + + L+ ++ +G+ V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TY TL HG F+ + A +F +M + V + TY T +DGLC
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 197/364 (54%), Gaps = 6/364 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++ ++ L K +H D L+LF +++ G+ PD++TYS LI+C C G+ S + +L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PNVVTF SLI E +++EA LF ++ +PN++TYN+LING C
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A +F M + + P+ VTY+ +I+G CK V ELF M L N V
Sbjct: 363 EAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LIHGF A+D + A+ + +MV GV PN+++ N +++ LCKNGK++ A + + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + P+ +TYN + +G C GK+ +LF S+ G K D +YN +I+G+CK
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
EEA +L+ ++ G P TYNTL + +L EM+ A D TY
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 374 IDGL 377
D L
Sbjct: 597 TDML 600
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 46/370 (12%)
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F+ L+ + + + K++ G N+ TYN +IN LC
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R AL + +M + + + P+ VT + +++G C + +A L QM
Sbjct: 112 RRSQLSFALAILGKM------MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P+ VT+T+L+HG N +EA L+ MV +G QP++V+ ++N LCK G+ D A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY------- 300
LL+ M + + + Y+T++D C ++ LF M++ G + D F+Y
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 301 ----------------------------NILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
N LI+ + K ++ EA L++E+ + I P +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV-----RFTY 387
VTYN+L +G + + A ++F M D D TY T I+G C +V F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 388 ARRKGNSGNT 397
R+G GNT
Sbjct: 406 MSRRGLVGNT 415
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++N LL L KN + + +F+ L + PD+YTY+I+ CK G+V G+ +
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P+V+ + ++I G C + EA LF K+K G P+ TYNTLI R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKA 176
G + L KEM + F + TY ++ D L +G +DK
Sbjct: 568 DGDKAASAELIKEMRSCR------FAGDASTYGLVTDML-HDGRLDKG 608
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
K+D A L MV+ P+ ++ L+ K + V ME +G H+ ++YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 302 ILI-----------------------------------NGYCKNKEVEEALSLYNELPFK 326
I+I NG+C + EA++L +++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
G +P VT+ TL HGLF+ +A A+ L M D TY I+GLC R +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
+++EA+ L+ E+ P++V ++ L + ++++ + + +M+ V+ + TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 372 TFIDGLCVRPQVRFTYA 388
I+ LC R Q+ F A
Sbjct: 105 IMINCLCRRSQLSFALA 121
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 271 bits (693), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 223/405 (55%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL +AK ++ V+SL +++ ++G+ DLYTYSI INCFC+ Q+SL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRI------------------------------- 97
++++ + P++VT +SL+ G C RI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 98 ----VEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
EA AL ++ GC+P+++TY T++NGLC+ G +ALNL +M
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------I 254
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
K N V ++ IID LCK V+ A +LF +M+ + + PNVVTY SLI+ C+ W++A
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL M+++ + PNVV+ N +++ K GK+ A +L + M+Q + P+ TYN L++GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ +++ K++F M S C + +YN LING+CK K VE+ + L+ E+ +G+ V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TY T+ G F+ + A +F +M N V D TY + GLC
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 201 bits (512), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
FN ++ L K +H + + LF + + G+ P++ TY+ LINC C G+ S + +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PNVVTF +LI E ++VEA L ++ +P+ ITYN LING C
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A +FK M + + PN TY+ +I+G CK V+ ELF +M L N V
Sbjct: 381 EAKQMFKFMVSKDC------LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT++I GF A D + A+ + +MV V ++++ +++++ LC GK+D A + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ ++ N F YNT+++G C GK+ +LF S+ K D +YN +I+G C + +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLL 551
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA--LKLFVEMQGNDVAADTCT 369
+EA L+ ++ G P TYNTL +R +RA +L EM+ + D T
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 20/372 (5%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP V SF L G + + + ++ IL N + +V
Sbjct: 24 PPTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDAVD 69
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F L+ + ++ +L +++ G ++ TY+ IN C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +AL + +M + + ++P+ VT S +++G C + A L QM
Sbjct: 130 RRSQLSLALAVLAKM------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P+ T+T+LIHG N +EA L+ +MV +G QP++V+ ++N LCK G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL+ M ++ N +NT++D C + +LF ME+ G + + +YN LIN
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C +A L + + K I P VVT+N L F+ + A KL EM + DT
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 368 CTYRTFIDGLCV 379
TY I+G C+
Sbjct: 364 ITYNLLINGFCM 375
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 10/238 (4%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++N L+ K K + + LF+ ++ GL + TY+ +I F + G ++
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F +++ + +++T++ L+ GLC+ ++ A +F L+ E N+ YNT+I G+C+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A +LF ++ KP+ VTY+ +I GLC + + +A +LF +MK +
Sbjct: 516 AGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
PN TY +LI D + L+ EM G + + +++ N L +G++D +
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS 623
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%)
Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
++A L +MV P++V N +++ + K K + L + M + + +TY+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
++ FC +++ + M +G + D + + L+NGYC +K + +A++L +++ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
KP T+ TL HGLF +A A+ L +M D TY T ++GLC R +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
P + +++ILL L DT L +FK L + +++ Y+ +I CK G+V +
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + P+VVT+ ++I GLC++ + EA LF K+K G PN TYNTLI
Sbjct: 525 LFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
R + L KEM + G V +T++ ++ + +G +DK+ FL M
Sbjct: 582 RDCDRAASAELIKEMRSS----GFVGDASTIS---LVTNMLHDGRLDKS---FLNM 627
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 292 GCKHDDFS------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
GC F+ IL N +V++A+ L+ ++ P++V +N L + ++
Sbjct: 37 GCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
+ E + L +MQ ++ D TY FI+ C R Q+ A
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 224/413 (54%), Gaps = 42/413 (10%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M P P + F+ L +A+ K YD VL L K++ G+ +LYT SI+INC C+
Sbjct: 63 MTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
++SL F G+I++ + P+ VTF++LI GLC E R+ EA L ++ G +P +IT N
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
L+NGLC ++G T +A+ L ++M
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
K + V YSIIIDGLCK+G +D A LF +M+ + +++ YT+LI GFC+A
Sbjct: 242 K------IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
W++ LL +M+ + + P+VV+ + +++ K GK+ A L M+Q + P+ TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
+L+DGFC ++++ + M S GC + ++NILINGYCK +++ L L+ ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+G+ VTYNTL G E+ + E A +LF EM V D +Y+ +DGLC
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 192/399 (48%), Gaps = 29/399 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +F+ L+ L L L R+ +G P L T + L+N C G+VS ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
R++ + F PN VT+ ++K +C + A L K++ + + + Y+ +I+GLC+
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 129 TGHTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVT 159
G A NLF EM G + G P+ V
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
+S +ID KEG + +A+EL +M ++P+ VTYTSLI GFC N ++A +L MV
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
+G PN+ + N+++N CK +D+ L M V + TYNTL+ GFC GK+
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
KELF M S + D SY IL++G C N E E+AL ++ ++ ++ + YN +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
HG+ + + A LF + V D TY I GLC
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 8/365 (2%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++I++ L K+ D +LF + G D+ Y+ LI FC G+ G + ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
+ P+VV F++LI E ++ EA L ++ G P+ +TY +LI+G C+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 134 VALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
A ++ M + G G PN T++I+I+G CK +D ELF +M + +
Sbjct: 370 KANHMLDLMVSKGCG-------PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
VTY +LI GFC AK L EMV + V+P++VS ++++ LC NG+ + A + +
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
+ + + + YN ++ G C K++ +LF S+ G K D +YNI+I G CK
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
+ EA L+ ++ G P TYN L A ++ KL E++ + D T +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 373 FIDGL 377
+D L
Sbjct: 603 VVDML 607
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + RS P ++ F+ L + + L +++ G N+ T + +IN C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +A + ++ I + ++P+TVT+S +I+GLC EG V +A EL +M
Sbjct: 119 RCRKLSLAFSAMGKI------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P ++T +L++G C ++A L+ MV+ G QPN V+ ++ +CK+G+ A
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL M + ++ +A Y+ ++DG C G ++ LF ME G K D Y LI G+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C ++ L ++ + I P VV ++ L + + A +L EM ++ DT
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 368 CTYRTFIDGLCVRPQV 383
TY + IDG C Q+
Sbjct: 353 VTYTSLIDGFCKENQL 368
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%)
Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
D A +LF +M P ++ ++ L ++ L +M +G+ N+ + +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
+N C+ K+ A + +++ P+ T++TL++G CL G+++ EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
K + N L+NG C N +V +A+ L + + G +P VTY + + + Q A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 354 LFVEMQGNDVAADTCTYRTFIDGLC 378
L +M+ + D Y IDGLC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC 258
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + S+ ILL L N + L +F+++ + D+ Y+I+I+ C +V + +
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P+V T+ +I GLC + + EA LF K++ G PN TYN LI
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTV--TYSIIIDGLCKEGFVD 174
G + L +E+ G +TV ++ DG K+ F+D
Sbjct: 575 EGDATKSAKLIEEIKR----CGFSVDASTVKMVVDMLSDGRLKKSFLD 618
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
K D+A L M + RP ++ L T + + V +L ME G H+ ++ +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
I+IN C+ +++ A S ++ G +P VT++TL +GL + AL+L M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
T ++GLC+ +V
Sbjct: 172 GHKPTLITLNALVNGLCLNGKV 193
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 214/370 (57%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ +A+ K ++ VL K+L G+ ++YT +I+INCFC+ + + +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ + P+ TF +LIKGL E ++ EA L ++ GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G T +AL+L ++M N K + TYS IID LC++G +D A LF +M+ + +
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+VVTY SL+ G C A WN+ LL +MV + + PNV++ NV+++ K GK+ A+
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M+ + PN TYNTLMDG+C+ +++ + M C D ++ LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K V++ + ++ + +G+ VTY+ L G + + + A +LF EM + V D
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 369 TYRTFIDGLC 378
TY +DGLC
Sbjct: 440 TYGILLDGLC 449
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 8/379 (2%)
Query: 1 MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
+R M V +++ ++ L ++ D +SLFK + + G+ + TY+ L+ CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 59 MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
G+ + G ++ ++ PNV+TF L+ E ++ EA L+ ++ G PN+IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
YNTL++G C A N+ M P+ VT++ +I G C VD +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCS------PDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
+F + L N VTY+ L+ GFC + A+ L EMV GV P+V++ ++++ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
NGK++ A + + + + + Y T+++G C GK+ LF S+ G K +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
+Y ++I+G CK + EA L ++ G P TYNTL + KL EM
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 359 QGNDVAADTCTYRTFIDGL 377
+ +AD + + ID L
Sbjct: 570 KSCGFSADASSIKMVIDML 588
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 5 HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
H P V ++ ILL L N + L +F+ L + + Y+ +I CK G+V
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
+ +F + PNV+T+T +I GLC + + EA L K++ G PN TYNTLI
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
R G + L +EM + F + + ++ID L G +DK+ FL M
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCG------FSADASSIKMVIDMLL-SGELDKS---FLDM 600
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 225 PNVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
++ + NV E ++G K D+A L M++ P+ ++ T + N
Sbjct: 47 SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL 106
Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
V + +E G H+ ++ NI+IN +C+ + A S+ ++ G +P T+NTL
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
GLF + A+ L M N D TY + ++G+C
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 222/413 (53%), Gaps = 42/413 (10%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M P P P+ FN L +A+ K YD VL K + G+ D+YT +I+INC+C+
Sbjct: 61 MIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK 119
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
++ F + GR + + P+ +TF++L+ G C E R+ EA AL ++ P+++T +
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179
Query: 121 TLINGLC-----------------------------------RTGHTIVALNLFKEMTNG 145
TLINGLC ++G++ +AL+LF++M
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
N K + V YSI+ID LCK+G D A LF +M+ + + +VVTY+SLI G C+
Sbjct: 240 N------IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
W++ +L EM+ + + P+VV+ + +++ K GK+ A L + M+ + P+ TY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
N+L+DGFC ++ ++F M S GC+ D +Y+ILIN YCK K V++ + L+ E+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
KG+ P +TYNTL G + + A +LF EM V TY +DGLC
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 218 bits (554), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 7/378 (1%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M M P V+ ++ G K + + L L R+ G PD TY ++N CK G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEA-LVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
+L +F ++ +VV ++ +I LC + +A +LF +++ G + +V+TY+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
+LI GLC G + +EM IG P+ VT+S +ID KEG + +AKEL+
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREM------IGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
+M + P+ +TY SLI GFC N +EA + MV +G +P++V+ ++++N CK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
++D+ RL + + PN TYNTL+ GFC +GK+N KELF M S G +Y
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
IL++G C N E+ +AL ++ ++ + + YN + HG+ + + A LF +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 361 NDVAADTCTYRTFIDGLC 378
V D TY I GLC
Sbjct: 519 KGVKPDVVTYNVMIGGLC 536
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 191/370 (51%), Gaps = 6/370 (1%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V ++I++ L K+ +D LSLF + G+ D+ TYS LI C G+ G +
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
++ P+VVTF++LI E +++EA L+ ++ G P+ ITYN+LI+G C+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
A +F M + E P+ VTYSI+I+ CK VD LF ++ + L P
Sbjct: 365 CLHEANQMFDLMVSKGCE------PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
N +TY +L+ GFC + N AK L EMV +GV P+VV+ ++++ LC NG+++ A +
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
+ M + + YN ++ G C K++ LF S+ G K D +YN++I G CK
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
+ EA L+ ++ G P TYN L +++L EM+ +AD+ T
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 371 RTFIDGLCVR 380
+ ID L R
Sbjct: 599 KMVIDMLSDR 608
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
V+ A +LF M P + + L ++ G M G++ ++ + +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ K+ A +L + P+ T++TL++GFCL G+++ L M M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ D + + LING C V EAL L + + G +P VTY + + L + + AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
LF +M+ ++ A Y ID LC
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLC 256
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 41/211 (19%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +++IL+ K K D + LF+ ++S GL P+ TY+ L+ FC+ G+++ +
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
F ++ P+VVT+ L+ GLC
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 94 ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
S++ +A +LF L G +P+V+TYN +I GLC+ G A LF++M E G
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK----EDGCT- 557
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
P+ TY+I+I + + EL +MK
Sbjct: 558 -PDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
PP V ++ ILL L N + L +F+++ + + Y+I+I+ C +V +
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+F + P+VVT+ +I GLC + + EA LF K+K GC P+ TYN LI
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGL 167
I ++ L +EM F ++ T ++ID L
Sbjct: 572 GGSGLISSVELIEEMKVCG------FSADSSTIKMVIDML 605
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 226 NVVSSNVIMNELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
++ + + E +NG K+++A L + M+Q P +N L T + + V
Sbjct: 30 SITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLV 89
Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
ME G +HD ++ I+IN YC+ K++ A S+ G +P +T++TL +G
Sbjct: 90 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+ A+ L M D T T I+GLC++ +V
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 216/380 (56%), Gaps = 6/380 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL + K K YD V+SL K++ +G+ DLYT++I+INCFC QVSL I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++L+ + P+ VT SL+ G C +R+ +A +L K+ G +P+++ YN +I+ LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
T A + FKE+ +PN VTY+ +++GLC A L M + +
Sbjct: 203 TKRVNDAFDFFKEIERKG------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNV+TY++L+ F EAK L EMV + P++V+ + ++N LC + ++D A++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ DLMV + +YNTL++GFC ++ +LF M G + +YN LI G+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ +V++A ++++ F GI P + TYN L GL + + E+AL +F +MQ ++ D
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 369 TYRTFIDGLCVRPQVRFTYA 388
TY T I G+C +V ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWS 456
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 42/363 (11%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M + P V+ +++ G +N+ D V SL ++ IG PD+ Y+ +I+ CK
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
+V+ F F I R PNVVT+T+L+ GLC SR +AA L + + PNVITY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE-- 178
L++ + G + A LF+EM + + P+ VTYS +I+GLC +D+A +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEM------VRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 179 ---------------------------------LFLQMKYENLNPNVVTYTSLIHGFCHA 205
LF +M L N VTY +LI GF A
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
D ++A+ +M G+ P++ + N+++ LC NG+++ A + + M + ++ + TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
T++ G C TGK+ LF S+ G K D +Y +++G C + E +LY ++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 326 KGI 328
+G+
Sbjct: 499 EGL 501
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 157/289 (54%), Gaps = 6/289 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ L+ L + + L + + P++ TYS L++ F K G+V +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++R P++VT++SLI GLC RI EA +F + + GC +V++YNTLING C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ LF+EM+ + G+V NTVTY+ +I G + G VDKA+E F QM + +
Sbjct: 343 AKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P++ TY L+ G C + +A + +M + + ++V+ ++ +CK GK++ A
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
L + ++P+ TY T+M G C G ++ V+ L+ M+ G +D
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 41/313 (13%)
Query: 99 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
+A LF+ + P+++ +N L++ + + V ++L K+M +G+ + +
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RNDLY 121
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
T++I+I+ C V A + +M P+ VT SL++GFC N ++A L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 219 VD-----------------------------------QGVQPNVVSSNVIMNELCKNGKM 243
V+ +G++PNVV+ ++N LC + +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 244 DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
+A+RLL M++ + PN TY+ L+D F GK+ KELF M M D +Y+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
ING C + ++EA +++ + KG VV+YNTL +G + ++ E +KLF EM +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 364 AADTCTYRTFIDG 376
++T TY T I G
Sbjct: 362 VSNTVTYNTLIQG 374
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++NILLG L N + L +F+ + + D+ TY+ +I CK G+V + +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P++VT+T+++ GLC + + E AL+TK+K G N T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS-------- 509
Query: 129 TGHTIVALNLFKEM 142
G ++ L K+M
Sbjct: 510 DGDITLSAELIKKM 523
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 228/422 (54%), Gaps = 46/422 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFC----------- 57
P + F+ LL +AK +D V+S +++ +G+ +LYTY+ILINCFC
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 58 -----KMG-------------------QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
K+G ++S + +++ + P+ VTFT+LI GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 94 ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
++ EA AL ++ GC+P+++TY ++NGLC+ G T +ALNL +M E
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE----- 250
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
N V YS +ID LCK D A LF +M+ + + PNV+TY+SLI C+ W++A
Sbjct: 251 -ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
LL +M+++ + PN+V+ + +++ K GK+ A +L + M++ + PN FTY++L++GFC
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ ++ K++ M C + +YN LING+CK K V++ + L+ E+ +G+ V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC-----VRPQVRFTYA 388
TY TL HG F+ R + A +F +M V + TY +DGLC + V F Y
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 389 RR 390
+R
Sbjct: 490 QR 491
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 151/264 (57%), Gaps = 6/264 (2%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
++ ++ L K +H D L+LF + + G+ P++ TYS LI+C C G+ S + ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
PN+VTF++LI + ++V+A L+ ++ +PN+ TY++LING C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A + + M + PN VTY+ +I+G CK VDK ELF +M L N V
Sbjct: 376 EAKQMLELMIRKDC------LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TYT+LIHGF A D + A+ + +MV GV PN+++ N++++ LCKNGK+ A + + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGK 277
+ + P+ +TYN +++G C GK
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 161/344 (46%), Gaps = 42/344 (12%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M M P V+ ++ G NK + V +L R+ G PDL TY ++N CK G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAV-ALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
L + ++ + NVV ++++I LC +A LFT+++ G PNVITY+
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
+LI+ LC G A L +M I PN VT+S +ID K+G + KA++L+
Sbjct: 293 SLISCLCNYGRWSDASRLLSDM------IERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 181 LQMKYENLNPN-----------------------------------VVTYTSLIHGFCHA 205
+M +++PN VVTY +LI+GFC A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
++ L EM +G+ N V+ +++ + DNA + MV V PN TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
N L+DG C GK+ + +F ++ + D ++YNI+I G CK
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +++ L+ CL + L + + P+L T+S LI+ F K G++ +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +++ PN+ T++SLI G C R+ EA + + C PNV+TYNTLING C+
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 129 TGHTIVALNLFKEMTNGNGEIG----------------------VVFK--------PNTV 158
+ LF+EM+ G +G +VFK PN +
Sbjct: 406 AKRVDKGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW 208
TY+I++DGLCK G + KA +F ++ + P++ TY +I G C A W
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 142/279 (50%), Gaps = 6/279 (2%)
Query: 99 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
+A LF + P++I ++ L++ + + + ++ ++M EI + N
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-----EI-LGISHNLY 114
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
TY+I+I+ C+ + A L +M P++VT SL++GFCH N ++A L+ +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
V+ G +P+ V+ +++ L + K A L+D MVQ +P+ TY +++G C G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
+ L ME+ + + Y+ +I+ CK + ++AL+L+ E+ KG++P V+TY++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
L + A +L +M + + T+ ID
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 4/242 (1%)
Query: 141 EMTNGNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
E+ + G GV+ + P+ + +S ++ + K D +M+ ++ N+ TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC 256
LI+ FC + + A LL +M+ G +P++V+ N ++N C ++ +A L+D MV+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 257 DVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEA 316
+P+ T+ TL+ G L K + L M GC+ D +Y ++NG CK + + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
L+L N++ I+ VV Y+T+ L + R + AL LF EM+ V + TY + I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 377 LC 378
LC
Sbjct: 298 LC 299
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%)
Query: 207 DWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYN 266
+ ++A GL M P+++ + +++ + K K D + M + N +TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
L++ FC +++ L M +G + D + N L+NG+C + +A++L +++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
G KP VT+ TL HGLF +A A+ L M D TY ++GLC R
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++NILL L KN + +F+ L + PD+YTY+I+I CK G+ +G +
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520
Query: 69 F 69
F
Sbjct: 521 F 521
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 248 bits (633), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 213/371 (57%), Gaps = 7/371 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ LL +AK +D V+SL +++ ++G+ +LYTYSI IN FC+ Q+SL I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ + P++VT SL+ G C +RI EA AL ++ G +P+ +T+ TL++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A+ L + M + P+ VTY +I+GLCK G D A L +M+ +
Sbjct: 193 HNKASEAVALVERMVVKGCQ------PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+VV Y ++I G C ++A L +M +G++P+V + N +++ LC G+ +ASR
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM-ESMGCKHDDFSYNILINGY 307
LL M++ ++ P+ +N L+D F GK+ ++L+ M +S C D +YN LI G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
CK K VEE + ++ E+ +G+ VTY TL HG F+ R + A +F +M + V D
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 368 CTYRTFIDGLC 378
TY +DGLC
Sbjct: 427 MTYNILLDGLC 437
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 31/400 (7%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M M P V+ ++ G NK + V +L +R+ G PDL TY +IN CK G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
+ L + ++ + +VV + ++I GLC + +A LF K++ G +P+V TYN
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFK-------------------------- 154
LI+ LC G A L +M N +VF
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 155 ----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNE 210
P+ V Y+ +I G CK V++ E+F +M L N VTYT+LIHGF A D +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
A+ + +MV GV P++++ N++++ LC NG ++ A + + M + D++ + TY T+++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
C GK+ +LF S+ G K + +Y +++G+C+ EEA +L+ E+ G P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
TYNTL + +L EM+ A D T+
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 171/334 (51%), Gaps = 7/334 (2%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+N ++ L K KH D LF ++ + G+ PD++TY+ LI+C C G+ S + +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 132
P++V F +LI E ++VEA L+ ++ K+ C P+V+ YNTLI G C+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
+ +F+EM+ G +G NTVTY+ +I G + D A+ +F QM + ++P++
Sbjct: 373 EEGMEVFREMSQ-RGLVG-----NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
+TY L+ G C+ + A + M + ++ ++V+ ++ LCK GK+++ L
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
+ V+PN TY T+M GFC G LFV M+ G + +YN LI ++ +
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR 346
+ L E+ G T+ + + L + R
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
+FG +++S P++V F+ L+ + ++ +L +++ G N+ TY+ IN C
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
R +AL + +M + + + P+ VT + +++G C + +A L QM
Sbjct: 122 RRSQLSLALAILGKM------MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
P+ VT+T+L+HG N +EA L+ MV +G QP++V+ ++N LCK G+ D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL+ M + + + YNT++DG C ++ +LF ME+ G K D F+YN LI+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAAD 366
C +A L +++ K I P +V +N L + + A KL+ EM + D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 367 TCTYRTFIDGLCVRPQVR-----FTYARRKGNSGNT 397
Y T I G C +V F ++G GNT
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 149/291 (51%), Gaps = 6/291 (2%)
Query: 86 SLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG 145
+L + + + ++ +A LF + P+++ ++ L++ + + + ++L ++M N
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN- 103
Query: 146 NGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHA 205
+G+ N TYSI I+ C+ + A + +M P++VT SL++GFCH
Sbjct: 104 ---LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 206 NDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTY 265
N +EA L+ +MV+ G QP+ V+ +++ L ++ K A L++ MV +P+ TY
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 266 NTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPF 325
+++G C G+ + L ME + D YN +I+G CK K +++A L+N++
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 326 KGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
KGIKP V TYN L L + A +L +M ++ D + ID
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D A LF M P++V ++ L+ N ++ L +M + G+ N+ + ++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
+N C+ ++ A +L M++ P+ T N+L++GFC +I+ L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ D ++ L++G ++ + EA++L + KG +P +VTY + +GL + + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
L +M+ + AD Y T IDGLC
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLC 261
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
++A GL +MV P++V + +++ + K K D L + M + N +TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
++ FC +++ + M +G + N L+NG+C + EA++L +++ G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ 382
+P VT+ TL HGLF+ +A A+ L M D TY I+GLC R +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 45/173 (26%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
+ ++ ++ L K + LF L+ G+ P++ TY+ +++ FC+
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR------------ 508
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
KGL E A ALF ++K G PN TYNTLI R G
Sbjct: 509 ------------------KGLKEE-----ADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
+ L KEM + F + T+ ++ + L +G +DK+ FL M
Sbjct: 546 DEAASAELIKEMRSCG------FAGDASTFGLVTNML-HDGRLDKS---FLDM 588
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
G DD N L ++ ++++A+ L+ ++ P++V ++ L + ++ + +
Sbjct: 36 GASSDDCREN-LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV 94
Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
+ L +MQ ++ + TY FI+ C R Q+ A
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 212/383 (55%), Gaps = 12/383 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +FN L+ L K H + + + G PD+YTY+ +I+ CK+G+V +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+++ +PN VT+ +LI LC E+++ EA L L + G P+V T+N+LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
T + VA+ LF+EM + E P+ TY+++ID LC +G +D+A + QM+
Sbjct: 413 TRNHRVAMELFEEMRSKGCE------PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+V+TY +LI GFC AN EA+ + EM GV N V+ N +++ LCK+ ++++A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L+D M+ +P+ +TYN+L+ FC G I + ++ +M S GC+ D +Y LI+G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM-QGNDVAADT 367
K VE A L + KGI T YN + GLF R+ A+ LF EM + N+ D
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 368 CTYRTFIDGLC-----VRPQVRF 385
+YR GLC +R V F
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDF 669
Score = 222 bits (565), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 203/376 (53%), Gaps = 5/376 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +N +L L V +++ G+ PD+ T+++LI C+ Q+ ++
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ P+ TFT++++G E + A + ++ FGC + ++ N +++G C+
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G ALN +EM+N +G F P+ T++ +++GLCK G V A E+ M E
Sbjct: 272 EGRVEDALNFIQEMSNQDG-----FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P+V TY S+I G C + EA +L +M+ + PN V+ N +++ LCK +++ A+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L ++ + P+ T+N+L+ G CLT ELF M S GC+ D+F+YN+LI+ C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+++EAL++ ++ G +V+TYNTL G + + A ++F EM+ + V+ ++
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 369 TYRTFIDGLCVRPQVR 384
TY T IDGLC +V
Sbjct: 507 TYNTLIDGLCKSRRVE 522
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 42/406 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYS------------------ 50
P VS+FN+L+ L + + + + + S GL PD T++
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 51 -----------------ILINCFCKMGQVSLGFVIFGRIL-RSCFAPNVVTFTSLIKGLC 92
++++ FCK G+V + + F P+ TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 93 AESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
+ A + + G +P+V TYN++I+GLC+ G A+ + +M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
PNTVTY+ +I LCKE V++A EL + + + P+V T+ SLI G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
L EM +G +P+ + N++++ LC GK+D A +L M + TYNTL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
C K +E+F ME G + +YN LI+G CK++ VE+A L +++ +G KP
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TYN+L ++A + M N D TY T I GLC
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 8/375 (2%)
Query: 12 SSFNILLGCLAKNKHYDTVLSLFKRL-NSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
S+F IL+ A+ + D +LS+ + + GL PD + Y+ ++N + L +
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
++ P+V TF LIK LC ++ A + + ++G P+ T+ T++ G G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN-LN 189
AL + ++M E G + + V+ ++I+ G CKEG V+ A +M ++
Sbjct: 239 DLDGALRIREQMV----EFGCSW--SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
P+ T+ +L++G C A A ++ M+ +G P+V + N +++ LCK G++ A +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
LD M+ D PN TYNTL+ C ++ EL + S G D ++N LI G C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
+ A+ L+ E+ KG +P TYN L L + + AL + +M+ + A T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 370 YRTFIDGLCVRPQVR 384
Y T IDG C + R
Sbjct: 473 YNTLIDGFCKANKTR 487
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 41/200 (20%)
Query: 4 MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
M P ++N LL + + + + S G PD+ TY LI+ CK G+V
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 64 LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
+ ++LRS ++K P+ YN +I
Sbjct: 593 VA----SKLLRS-----------------------------IQMKGINLTPHA--YNPVI 617
Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF-VDKAKELFLQ 182
GL R T A+NLF+EM N P+ V+Y I+ GLC G + +A + ++
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEA-----PPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 183 MKYENLNPNVVTYTSLIHGF 202
+ + P + L G
Sbjct: 673 LLEKGFVPEFSSLYMLAEGL 692
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 7/385 (1%)
Query: 4 MHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
+H P P + F LL A + Y+TV+ +++ G+ DLY+++ILI+CFC+ ++
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122
Query: 63 SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
S + G++++ + P++VTF SL+ G C +RI +A +L + G EPNV+ YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
I+GLC+ G +AL L EM + VTY+ ++ GLC G A +
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKG------LGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
M ++NP+VVT+T+LI F + +EA+ L EM+ V PN V+ N I+N LC +G+
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
+ +A + DLM PN TYNTL+ GFC ++ +LF M G D F+YN
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
LI+GYC+ ++ AL ++ + + + P ++T+ L HGL + E AL F +M+ ++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 363 VAADTCTYRTFIDGLCVRPQVRFTY 387
Y I GLC +V +
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAW 441
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N L+ L KN + L L + GL D+ TY+ L+ C G+ S +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+++ P+VVTFT+LI + + EA L+ ++ +PN +TYN++INGLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A F M + F PN VTY+ +I G CK VD+ +LF +M E
Sbjct: 294 HGRLYDAKKTFDLMASKG-----CF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N ++ TY +LIHG+C A + MV + V P++++ ++++ LC NG++++A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
D M + + YN ++ G C K+ + ELF + G K D +Y I+I G C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 309 KNKEVEEALSLYNELPFKGI 328
KN EA L + +GI
Sbjct: 468 KNGPRREADELIRRMKEEGI 487
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVV-------------------------------- 228
GF H+ + +A L EMV P++V
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 229 ---SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
S ++++ C+ ++ A +L M++ P+ T+ +L+ GFCL +I L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 286 VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEI 345
+ M G + + YN LI+G CKN E+ AL L NE+ KG+ VVTYNTL GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 346 RQAERALKLFVEMQGNDVAADTCTYRTFID 375
+ A ++ +M + D T+ ID
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALID 254
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
+ ++A L MV P+ + L+ + V ME G HD +S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
ILI+ +C+ + ALS+ ++ G +P++VT+ +L HG + + A L + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 362 DVAADTCTYRTFIDGLC 378
+ Y T IDGLC
Sbjct: 171 GYEPNVVVYNTLIDGLC 187
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 212/370 (57%), Gaps = 9/370 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ +L +AK+K+YD V+SLF + G+ DLY+Y+I+INC C+ + + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ + P+VVT +SLI G C +R+ +A L +K++ G P+V+ YNT+I+G C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A+ LF M GV + + VTY+ ++ GLC G A L M ++
Sbjct: 187 IGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNV+T+T++I F ++EA L EM + V P+V + N ++N LC +G++D A +
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+LDLMV P+ TYNTL++GFC + +++ +LF M G D +YN +I GY
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ + A +++ + +P + TY+ L +GL + E+AL LF MQ +++ D
Sbjct: 361 QAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 369 TYRTFIDGLC 378
TY I G+C
Sbjct: 418 TYNIVIHGMC 427
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
S P + +++ILL L N + L LF+ + + D+ TY+I+I+ CK+G V +
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEP 114
+F + P+VV++T++I G C + + ++ L+ K++ G P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 25/386 (6%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
P + SFNIL+ C LS F +L +G PD+ T++ L++ C ++S
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 68 IFGRILRSCF---------------APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
+FG ++ + F P V+TF +LI GLC E R++EAAAL K+ G
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
+V+TY T++NG+C+ G T ALNL +M + KP+ V YS IID LCK+G
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGH 311
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
A+ LF +M + + PNV TY +I GFC W++A+ LL +M+++ + P+V++ N
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
+++ K GK+ A +L D M+ + P+ TYN+++ GFC + + K +F M S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
D ++N +I+ YC+ K V+E + L E+ +G+ TYNTL HG E+ A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
LF EM + V DT T + G C
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFC 513
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 191/367 (52%), Gaps = 10/367 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ ++ L K+ H+ LF + G+ P+++TY+ +I+ FC G+ S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ P+V+TF +LI E ++ EA L ++ P+ +TYN++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A ++F M + P+ VT++ IID C+ VD+ +L ++ L
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N TY +LIHGFC ++ N A+ L EM+ GV P+ ++ N+++ C+N K++ A
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L +++ + + YN ++ G C K++ +LF S+ G + D +YN++I+G+C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ +A L++++ G +P TYNTL G + + +++++L EM+ N + D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 369 TYRTFID 375
T + D
Sbjct: 644 TIKMVAD 650
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 13/341 (3%)
Query: 52 LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
+I F +M + + ++ ++ N+ +F LIK C ++ + + F KL G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 112 CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNG---------NGEIGVVFKPNTVTYSI 162
+P+V+T+NTL++GLC AL LF M + + + P +T++
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
+I+GLC EG V +A L +M + L+ +VVTY ++++G C D A LL +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 223 VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVK 282
++P+VV + I++ LCK+G +A L M++ + PN FTYN ++DGFC G+ + +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 283 ELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
L M D ++N LI+ K ++ EA L +E+ + I P VTYN++ +G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 343 FEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+ + + A +F M DV T+ T ID C +V
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRV 448
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 5 HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
H P + NILL +N+ + L LF+ + + D Y+I+I+ CK +V
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
+ +F + P+V T+ +I G C +S I +A LF K+K G EP+ TYNTLI
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVD 174
G + G ++ L EM NG G F V +I DG + F D
Sbjct: 616 GCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA-DLITDGRLDKSFSD 663
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D A + F M V +I F N + A L +M + + N+ S N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN------------- 279
++ C K+ + + + +P+ T+NTL+ G CL +I+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 280 --RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
LF M +G ++N LING C V EA +L N++ KG+ VVTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ +G+ ++ + AL L +M+ + D Y ID LC
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
+D+A D MV+ A N ++ F + + L+ ME + +S+NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL-FEIRQAE------------ 349
LI +C ++ +LS + +L G +P VVT+NTL HGL E R +E
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 350 --RALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
A+ LF +M + T+ T I+GLC+ +V
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 241 bits (614), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 207/399 (51%), Gaps = 29/399 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N ++ L K + D + + + G+ PD TY+ +++ +C GQ
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ P+VVT++ L+ LC R +EA +F + G +P + TY TL+ G
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 129 TGHTIVALNLFKEMT-NG-----------------NGEIG---VVFK--------PNTVT 159
G + L M NG G++ +VF PN VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
Y +I LCK G V+ A F QM E L+P + Y SLIHG C N W A+ L++EM+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
D+G+ N + N I++ CK G++ + +L +LMV+ V+PN TYNTL++G+CL GK++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
+L M S+G K + +Y+ LINGYCK +E+AL L+ E+ G+ P ++TYN +
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
GLF+ R+ A +L+V + + + TY + GLC
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 194/386 (50%), Gaps = 36/386 (9%)
Query: 29 TVLSLFKRLNSIG---LFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFT 85
+S + R+ G + PDL TY ILI C C+ G++ LGF G +++ F + + FT
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 86 SLIKGLCAESRIVEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
L+KGLCA+ R +A + ++ GC PNV +YN L+ GLC + AL L M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 145 GNGE------------IGVVFK--------------------PNTVTYSIIIDGLCKEGF 172
G I FK P+ VTY+ II LCK
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+DKA E+ M + P+ +TY S++HG+C + EA G L +M GV+P+VV+ ++
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
+M+ LCKNG+ A ++ D M + ++P TY TL+ G+ G + + L M G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
D + ++ILI Y K +V++A+ +++++ +G+ P VTY + L + + E A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLC 378
F +M ++ Y + I GLC
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLC 452
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++++ LL A + L + G+ PD Y +SILI + K G+V ++
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++ + PN VT+ ++I LC R+ +A F ++ G P I YN+LI+GLC
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A L EM + G+ NT+ ++ IID CKEG V ++++LF M +
Sbjct: 454 CNKWERAEELILEMLDR----GICL--NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNV+TY +LI+G+C A +EA LL MV G++PN V+ + ++N CK +M++A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M V P+ TYN ++ G T + KEL+V + G + + +YNI+++G C
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
KNK ++AL ++ L +K T+N + L ++ + + A LFV N + +
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 369 TYR 371
TYR
Sbjct: 688 TYR 690
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 204/456 (44%), Gaps = 82/456 (17%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRL---NSIGLFPDLYTYSILINCFCKMGQVSLG 65
P V S+NILL L L L + G PD+ +Y+ +IN F K G
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 66 FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
+ + +L P+VVT+ S+I LC + +A + + G P+ +TYN++++G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
C +G A+ K+M + E P+ VTYS+++D LCK G +A+++F M
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVE------PDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-------------------------- 219
L P + TY +L+ G+ E GLL MV
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Query: 220 ---------DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
QG+ PN V+ ++ LCK+G++++A + M+ + P YN+L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 271 GFCLTGKINRVKELFVSM--------------------------ES---------MGCKH 295
G C K R +EL + M ES +G K
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
+ +YN LINGYC +++EA+ L + + G+KP VTY+TL +G +I + E AL LF
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 356 VEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
EM+ + V+ D TY + GL Q R T A ++
Sbjct: 570 KEMESSGVSPDIITYNIILQGLF---QTRRTAAAKE 602
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 180/402 (44%), Gaps = 41/402 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P F+IL+ AK D + +F ++ GL P+ TY +I CK G+V +
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCA----------------------------------- 93
F +++ +P + + SLI GLC
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 94 ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
E R++E+ LF + G +PNVITYNTLING C G A+ L +G + V
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL------SGMVSVGL 542
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
KPNTVTYS +I+G CK ++ A LF +M+ ++P+++TY ++ G AK
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
L + + + G Q + + N+I++ LCKN D+A ++ + D++ A T+N ++D
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
G+ + K+LFV+ S G + ++Y ++ +EE L+ + G
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
N + L + + RA + + + T FID
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 234 bits (598), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 202/363 (55%), Gaps = 12/363 (3%)
Query: 21 LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
L K + +L + L G PD+ TY+++I+ +CK G+++ + R+ +P+
Sbjct: 150 LGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203
Query: 81 VVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFK 140
VVT+ ++++ LC ++ +A + ++ C P+VITY LI CR A+ L
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 141 EMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIH 200
EM + P+ VTY+++++G+CKEG +D+A + M PNV+T+ ++
Sbjct: 264 EMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 201 GFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRP 260
C W +A+ LL +M+ +G P+VV+ N+++N LC+ G + A +L+ M Q +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 261 NAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLY 320
N+ +YN L+ GFC K++R E M S GC D +YN ++ CK+ +VE+A+ +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 321 NELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
N+L KG P ++TYNT+ GL + + +A+KL EM+ D+ DT TY + + GL
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 381 PQV 383
+V
Sbjct: 498 GKV 500
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 192/369 (52%), Gaps = 6/369 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N +L L + + + R+ +PD+ TY+ILI C+ V +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ P+VVT+ L+ G+C E R+ EA + + GC+PNVIT+N ++ +C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
TG + A L +M F P+ VT++I+I+ LC++G + +A ++ +M
Sbjct: 322 TGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN ++Y L+HGFC + A L MV +G P++V+ N ++ LCK+GK+++A
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+L+ + P TYNT++DG GK + +L M + K D +Y+ L+ G
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ +V+EA+ ++E GI+P VT+N++ GL + RQ +RA+ V M +
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 369 TYRTFIDGL 377
+Y I+GL
Sbjct: 556 SYTILIEGL 564
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N+++ K + LS+ R++ + PD+ TY+ ++ C G++ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 69 FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
R+L R C+ P+V+T+T LI+ C +S + A L +++ GC P+V+TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ G A+ +M + +PN +T++II+ +C G A++L M +
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
+P+VVT+ LI+ C A +L +M G QPN +S N +++ CK KMD A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
L+ MV P+ TYNT++ C GK+ E+ + S GC +YN +I+G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
K + +A+ L +E+ K +KP +TY++L GL + + A+K F E + + +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 368 CTYRTFIDGLCVRPQ 382
T+ + + GLC Q
Sbjct: 520 VTFNSIMLGLCKSRQ 534
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 17/360 (4%)
Query: 24 NKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVT 83
N HY +V S F D+ + + L + G++ GF ++ P+++
Sbjct: 88 NGHYSSVNSSFA-------LEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 84 FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
T+LI+G C + +AA + L+ G P+VITYN +I+G C+ G AL++ M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
P+ VTY+ I+ LC G + +A E+ +M + P+V+TYT LI C
Sbjct: 200 ---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
+ A LL EM D+G P+VV+ NV++N +CK G++D A + L+ M +PN
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
T+N ++ C TG+ ++L M G ++NILIN C+ + A+ + ++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
P G +P ++YN L HG + ++ +RA++ M D TY T + LC +V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 181/350 (51%), Gaps = 6/350 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ IL+ ++ + L + G PD+ TY++L+N CK G++
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ S PNV+T +++ +C+ R ++A L + G P+V+T+N LIN LCR
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A+++ ++M +PN+++Y+ ++ G CKE +D+A E +M
Sbjct: 357 KGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P++VTY +++ C +A +L ++ +G P +++ N +++ L K GK A +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
LLD M D++P+ TY++L+ G GK++ + F E MG + + ++N ++ G C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
K+++ + A+ + +G KP +Y L GL A+ AL+L E+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N+L+ + K D + + S G P++ T++I++ C G+ +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+LR F+P+VVTF LI LC + + A + K+ GC+PN ++YN L++G C+
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A+ + M + P+ VTY+ ++ LCK+G V+ A E+ Q+ +
Sbjct: 392 EKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P ++TY ++I G A +A LL EM + ++P+ ++ + ++ L + GK+D A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ +RPNA T+N++M G C + + +R + V M + GCK ++ SY ILI G
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 309 KNKEVEEALSLYNELPFKGI 328
+EAL L NEL KG+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 24/256 (9%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +FNIL+ L + + + +++ G P+ +Y+ L++ FCK ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 69 FGRIL-RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
R++ R C+ P++VT+ +++ LC + ++ +A + +L + GC P +ITYNT+I+GL
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ G T A+ L EM + KP+T+TYS ++ GL +EG VD+A + F + +
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI-------------- 233
+ PN VT+ S++ G C + + A L+ M+++G +PN S ++
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 234 --MNELCKNGKMDNAS 247
+NELC G M +S
Sbjct: 575 ELLNELCNKGLMKKSS 590
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 6/228 (2%)
Query: 5 HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
H P S+N LL K K D + +R+ S G +PD+ TY+ ++ CK G+V
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
I ++ +P ++T+ ++I GL + +A L +++A +P+ ITY++L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
GL R G A+ F E +G+ +PN VT++ I+ GLCK D+A + + M
Sbjct: 493 GLSREGKVDEAIKFFHEFE----RMGI--RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
PN +YT LI G + EA LL E+ ++G+ + V
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 6/239 (2%)
Query: 143 TNGNGEIGVV---FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
+NGNG V F V + + + + G +++ + M Y P+++ T+LI
Sbjct: 85 SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144
Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVR 259
GFC +A +L + G P+V++ NV+++ CK G+++NA +LD M V
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201
Query: 260 PNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSL 319
P+ TYNT++ C +GK+ + E+ M C D +Y ILI C++ V A+ L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 320 YNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+E+ +G P VVTYN L +G+ + + + A+K +M + + T+ + +C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 234 bits (597), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 211/387 (54%), Gaps = 7/387 (1%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
M HP P V F+ LL +AK Y+ V+SLF+ L +G+ DLY+++ LI+CFC+
Sbjct: 70 MAESHPLPSIVD-FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
++SL G++++ F P++VTF SL+ G C +R EA +L ++ G EPNV+ YN
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
T+I+ LC G AL++ K M ++G+ +P+ VTY+ +I L G + +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
M ++P+V+T+++LI + EAK EM+ + V PN+V+ N ++N LC +
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
G +D A ++L+++V PNA TYNTL++G+C +++ ++ M G D F+Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
N L GYC+ + A + + G+ P + T+N L GL + + +AL ++Q
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 361 NDVAADTCTYRTFIDGLCVRPQVRFTY 387
+ TY I GLC +V +
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAW 449
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 6/315 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N ++ L + +T L + K + +G+ PD+ TY+ LI G + I
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++R +P+V+TF++LI E +++EA + ++ PN++TYN+LINGLC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G L+ K++ N G F PN VTY+ +I+G CK VD ++ M + +
Sbjct: 302 HG----LLDEAKKVLNVLVSKG--FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+ + TY +L G+C A ++ A+ +L MV GV P++ + N++++ LC +GK+ A
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L+ + + TYN ++ G C K+ LF S+ G D +Y ++ G
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 309 KNKEVEEALSLYNEL 323
+ + EA LY ++
Sbjct: 476 RKRLWREAHELYRKM 490
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 13 SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
++N L + + + R+ S G+ PD+YT++IL++ C G++ V +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 73 LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
+S ++T+ +IKGLC ++ +A LF L G P+VITY T++ GL R
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 133 IVALNLFKEMTNGNG 147
A L+++M +G
Sbjct: 481 REAHELYRKMQKEDG 495
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%)
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
Y + H+ +N+A L +M + P++V + ++ + K K + L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
+ + +++ TL+D FC +++ M +G + ++ L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
EA+SL +++ G +P VV YNT+ L E Q AL + M+ + D TY + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 375 DGL 377
L
Sbjct: 227 TRL 229
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
K ++A L M + P+ ++ L+ K V LF +E +G HD +S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
LI+ +C+ + ALS ++ G +P++VT+ +L +G + + A+ L ++ G
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 362 DVAADTCTYRTFIDGLCVRPQV 383
+ Y T ID LC + QV
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQV 200
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 220/408 (53%), Gaps = 32/408 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F LL +AK K +D V++L L +G+ DLYT ++L+NCFC+ Q L
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ F P++VTFTSLI G C +R+ EA ++ ++ G +P+V+ Y T+I+ LC+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVF-----------------------------KPNTVT 159
GH AL+LF +M N VV KP+ +T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
++ +ID KEG A+EL+ +M ++ PN+ TYTSLI+GFC +EA+ + M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
+G P+VV+ ++N CK K+D+A ++ M Q + N TY TL+ GF GK N
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL---PFKGIKPTVVTYN 336
+E+F M S G + +YN+L++ C N +V++AL ++ ++ G+ P + TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
L HGL + E+AL +F +M+ ++ TY I G+C +V+
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
Y ++ H+ +NEA L MV+ P+++ ++N + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
V + +T N LM+ FC + + M +G + D ++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFI 374
EA+S+ N++ GIKP VV Y T+ L + AL LF +M+ + D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 375 DGLC 378
+GLC
Sbjct: 220 NGLC 223
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 8 PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSI---GLFPDLYTYSILINCFCKMGQVSL 64
PP + ++N+LL CL N L +F+ + G+ P+++TY++L++ C G++
Sbjct: 384 PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
++F + + ++T+T +I+G+C ++ A LF L + G +PNV+TY T+I+
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Query: 125 GLCRTGHTIVALNLFKEM 142
GL R G A LF++M
Sbjct: 504 GLFREGLKHEAHVLFRKM 521
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 236 ELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
E+ +NG + + A L MV+ P+ + L++ K + V L ++ M
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
G HD ++ N+L+N +C++ + A S ++ G +P +VT+ +L +G + E A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYA 388
+ + +M + D Y T ID LC V + +
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 212/389 (54%), Gaps = 11/389 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F +L +AK +D V+ L+ ++ ++G+ DLY+++ILI+CFC+ ++SL +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ F P++VT SL+ G C +R EA +L + FG PNV+ YNT+INGLC+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
AL +F M + + VTY+ +I GL G A L M +
Sbjct: 197 NRDLNNALEVFYCMEKKG------IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+PNV+ +T+LI F + EA+ L EM+ + V PNV + N ++N C +G + +A
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+ DLMV P+ TYNTL+ GFC + ++ +LF M G D F+YN LI+GYC
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ ++ A ++N + G+ P +VTYN L L + E+AL + ++Q +++ D
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 369 TYRTFIDGLCVRPQVR-----FTYARRKG 392
TY I GLC +++ F RKG
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 6/341 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N ++ L KN+ + L +F + G+ D TY+ LI+ G+ + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+++ PNV+ FT+LI E ++EA L+ ++ PNV TYN+LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A +F M + P+ VTY+ +I G CK V+ +LF +M Y+ L
Sbjct: 302 HGCLGDAKYMFDLMVSKGCF------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+ TY +LIHG+C A N A+ + MVD GV P++V+ N++++ LC NGK++ A
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+++ + + ++ + TYN ++ G C T K+ LF S+ G K D +Y +I+G C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
+ EA L + G P+ Y+ + AE
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 99 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
+A +LF ++ P+++ + ++ + + + + L+ +M N +G+ +
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN----LGI--SHDLY 115
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
+++I+I C+ + A L +M P++VT SL++GFC N + EA L+ M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
G PNVV N ++N LCKN ++NA + M + +R +A TYNTL+ G +G+
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
L M + + LI+ + K + EA +LY E+ + + P V TYN+L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+G A +F M D TY T I G C +V
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
H +++A L EM+ P++V ++ + K K D L M + + +
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
++ L+ FC +++ L M +G + + L+NG+C+ +EA+SL + +
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
G P VV YNT+ +GL + R AL++F M+ + AD TY T I GL
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 231 bits (589), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 203/379 (53%), Gaps = 9/379 (2%)
Query: 2 RHMHPSP-PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
R +H P P + F LL +AK YD V+SLF+++ +G+ P L T +I+++C C
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
Q G++++ F P++VTFTSL+ G C +RI +A ALF ++ G +PNV+TY
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 121 TLINGLCRTGHTIVALNLFKEM-TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
TLI LC+ H A+ LF +M TNG+ +PN VTY+ ++ GLC+ G A L
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGS-------RPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
M + PNV+T+T+LI F EAK L M+ V P+V + ++N LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
G +D A ++ LM + PN Y TL+ GFC + ++ ++F M G + +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
Y +LI GYC + A ++N++ + P + TYN L GL + E+AL +F M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 360 GNDVAADTCTYRTFIDGLC 378
++ + TY I G+C
Sbjct: 426 KREMDINIVTYTIIIQGMC 444
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
+PP + ++N+LL L N + L +F+ + + ++ TY+I+I CK+G+V F
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
+F + PNV+T+T++I G C I EA +LF K+K G PN Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 218/398 (54%), Gaps = 29/398 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++ F+ LL ++K K YD V+ L++++ +G+ +L T +IL+NCFC+ Q+SL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G++++ P++VTF SL+ G C R+ +A +F ++ G +PNV+ YNT+I+GLC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 129 TGHTIVALNLFKEM-TNGNGEIGVVFK----------------------------PNTVT 159
+ AL+L M +G G V + P+ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
++ +ID KEG V +A+E + +M +L+P++VTY+ LI+G C + +EA+ + MV
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
+G P+VV+ ++++N CK+ K+++ +L M Q V N TY L+ G+C GK+N
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
+E+F M G + +YN+L++G C N ++E+AL + ++ G+ +VTYN +
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
G+ + + A ++ + + D TY T + GL
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
+D + +LF M P++ ++ L+ ++ L +M G+ N+ + N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
++N C+ ++ A L M++ P+ T+ +L++GFC ++ +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
K + YN +I+G CK+K+V+ AL L N + GI P VVTYN+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 353 KLFVEMQGNDVAADTCTYRTFIDGLCVR 380
++ M ++ D T+ ID CV+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDA-CVK 268
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 236 ELCKNG----KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
E+ +NG K+D++ L MVQC P+ ++ L+ K + V L+ M+ +
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
G H+ + NIL+N +C+ ++ ALS ++ G +P++VT+ +L +G + A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
L +F +M G + Y T IDGLC QV
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 204/384 (53%), Gaps = 12/384 (3%)
Query: 9 PPVSSFNILLG--CLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
P V ++NIL+ C A N D L+LF ++ + G P++ TY+ LI+ +CK+ ++ GF
Sbjct: 203 PNVFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
+ + PN++++ +I GLC E R+ E + + T++ G + +TYNTLI G
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
C+ G+ AL + EM P+ +TY+ +I +CK G +++A E QM+
Sbjct: 321 CKEGNFHQALVMHAEMLRHG------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
L PN TYT+L+ GF NEA +L EM D G P+VV+ N ++N C GKM++A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
+L+ M + + P+ +Y+T++ GFC + ++ + M G K D +Y+ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
+C+ + +EA LY E+ G+ P TY L + E+AL+L EM V D
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 367 TCTYRTFIDGLCVRPQVRFTYARR 390
TY I+GL Q R A+R
Sbjct: 555 VVTYSVLINGL--NKQSRTREAKR 576
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 201/381 (52%), Gaps = 7/381 (1%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNK-HYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKM 59
+ H P V S+N +L ++K + ++FK + + P+++TY+ILI FC
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFA 218
Query: 60 GQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY 119
G + + +F ++ PNVVT+ +LI G C +I + L + G EPN+I+Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 120 NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKEL 179
N +INGLCR G + EM N G + + VTY+ +I G CKEG +A +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 180 FLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCK 239
+M L P+V+TYTSLIH C A + N A L +M +G+ PN + +++ +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
G M+ A R+L M P+ TYN L++G C+TGK+ + M+ G D S
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
Y+ +++G+C++ +V+EAL + E+ KGIKP +TY++L G E R+ + A L+ EM
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 360 GNDVAADTCTYRTFIDGLCVR 380
+ D TY I+ C+
Sbjct: 513 RVGLPPDEFTYTALINAYCME 533
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 197/374 (52%), Gaps = 7/374 (1%)
Query: 12 SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ-VSLGFVIFG 70
S F++++ ++ D LS+ + G P + +Y+ +++ + + +S +F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+L S +PNV T+ LI+G C I A LF K++ GC PNV+TYNTLI+G C+
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
L + M E PN ++Y+++I+GLC+EG + + + +M +
Sbjct: 255 KIDDGFKLLRSMALKGLE------PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
+ VTY +LI G+C ++++A + EM+ G+ P+V++ +++ +CK G M+ A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
D M + PN TY TL+DGF G +N + M G +YN LING+C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
++E+A+++ ++ KG+ P VV+Y+T+ G + AL++ EM + DT TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 371 RTFIDGLCVRPQVR 384
+ I G C + + +
Sbjct: 489 SSLIQGFCEQRRTK 502
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 194/398 (48%), Gaps = 21/398 (5%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + S+N+++ L + V + +N G D TY+ LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+LR P+V+T+TSLI +C + A +++ G PN TY TL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G+ A + +EM N NG F P+ VTY+ +I+G C G ++ A + MK + L
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P+VV+Y++++ GFC + D +EA + EMV++G++P+ ++ + ++ C+ + A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L + M++ + P+ FTY L++ +C+ G + + +L M G D +Y++LING
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR---------------QAERALK 353
K EA L +L ++ P+ VTY+TL I A +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
+F M G + D Y I G C +R Y K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 207/400 (51%), Gaps = 45/400 (11%)
Query: 5 HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
H P V ++ L+ + K + + + ++ GL P+ TY+ L++ F + G ++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
+ + + + F+P+VVT+ +LI G C ++ +A A+ +K G P+V++Y+T+++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
G CR+ AL + +EM E G+ KP+T+TYS +I G C++ +A +L+ +M
Sbjct: 459 GFCRSYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
L P+ TYT+LI+ +C D +A L EMV++GV P+VV+ +V++N L K +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMD---------------GFCLTGKINRVKELFVSME 289
A RLL + + P+ TY+TL++ GFC+ G + ++F SM
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF------ 343
K D +YNI+I+G+C+ ++ +A +LY E+ G VT L L
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 344 -------------EIRQAERALKLFVEM---QGN-DVAAD 366
E+ +AE+A K+ VE+ +GN DV D
Sbjct: 693 ELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLD 731
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 21/271 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +++ L+ + + L++ + +GL PD +TY+ LIN +C G + +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN---- 124
++ P+VVT++ LI GL +SR EA L KL P+ +TY+TLI
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 125 -----------GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
G C G A +F+ M N KP+ Y+I+I G C+ G +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN------HKPDGTAYNIMIHGHCRAGDI 656
Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
KA L+ +M + VT +L+ NE +++ ++ + V+
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVL 716
Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
+ + G MD +L M + PN +
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 182/335 (54%), Gaps = 6/335 (1%)
Query: 44 PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
PD++ Y+ LIN FCKM ++ + R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
+L + C+P VITY LI G AL L EM + KP+ TY+ I
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
I G+CKEG VD+A E+ ++ + P+V++Y L+ + W E + L+ +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
PNVV+ ++++ LC++GK++ A LL LM + + P+A++Y+ L+ FC G+++ E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
+M S GC D +YN ++ CKN + ++AL ++ +L G P +YNT+F L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 344 EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
RAL + +EM N + D TY + I LC
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 183/377 (48%), Gaps = 7/377 (1%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
MR SP V+ +NI++G L D L + +L S P + TY+ILI G
Sbjct: 184 MRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
V + +L P++ T+ ++I+G+C E + A + L+ GCEP+VI+YN
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
L+ L G L +M + + PN VTYSI+I LC++G +++A L
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCD------PNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
MK + L P+ +Y LI FC + A L M+ G P++V+ N ++ LCKN
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
GK D A + + + PN+ +YNT+ +G R + + M S G D+ +Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
N +I+ C+ V+EA L ++ P+VVTYN + G + + E A+ + M G
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 361 NDVAADTCTYRTFIDGL 377
N + TY I+G+
Sbjct: 537 NGCRPNETTYTVLIEGI 553
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N L+ K D + R+ S PD TY+I+I C G++ L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++L P V+T+T LI+ E + EA L ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A + + + E P+ ++Y+I++ L +G ++ ++L +M E
Sbjct: 276 EGMVDRAFEMVRNLELKGCE------PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+PNVVTY+ LI C EA LL M ++G+ P+ S + ++ C+ G++D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L+ M+ P+ YNT++ C GK ++ E+F + +GC + SYN + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ + AL + E+ GI P +TYN++ L + A +L V+M+ +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 369 TYRTFIDGLC 378
TY + G C
Sbjct: 510 TYNIVLLGFC 519
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 145/277 (52%), Gaps = 7/277 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +++IL+ L ++ + ++L K + GL PD Y+Y LI FC+ G++ +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ P++V + +++ LC + +A +F KL GC PN +YNT+ + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G I AL++ EM + NG P+ +TY+ +I LC+EG VD+A EL + M+
Sbjct: 451 SGDKIRALHMILEMMS-NG-----IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P+VVTY ++ GFC A+ +A +L MV G +PN + V++ + G A
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELF 285
L + +V+ D + +++ L F L + R + F
Sbjct: 565 LANDLVRIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V S+NILL L ++ L ++ S P++ TYSILI C+ G++ +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ P+ ++ LI C E R+ A + + GC P+++ YNT++ LC+
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G AL +F ++ GE+G PN+ +Y+ + L G +A + L+M +
Sbjct: 416 NGKADQALEIFGKL----GEVGC--SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P+ +TY S+I C +EA LL++M P+VV+ N+++ CK ++++A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKEL 284
+L+ MV RPN TY L++G G EL
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 7/287 (2%)
Query: 92 CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
C +E+ L + G P+VI LI G + A+ + E+ G+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQ--- 155
Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
P+ Y+ +I+G CK +D A + +M+ ++ +P+ VTY +I C + A
Sbjct: 156 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
+L +++ QP V++ +++ G +D A +L+D M+ ++P+ FTYNT++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPT 331
C G ++R E+ ++E GC+ D SYNIL+ + EE L ++ + P
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 332 VVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
VVTY+ L L + E A+ L M+ + D +Y I C
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 34/180 (18%)
Query: 233 IMNELCKNGKMDNASRLLDLMVQ----CDV------------------------------ 258
I + C++G + LL+ MV+ DV
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 259 RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALS 318
+P+ F YN L++GFC +I+ + M S D +YNI+I C +++ AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 319 LYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ N+L +PTV+TY L + ALKL EM + D TY T I G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
C +G L +M G D LI G+ + + +A+ + L G +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
YN L +G ++ + + A ++ M+ D + DT TY I LC R ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 207/390 (53%), Gaps = 10/390 (2%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNS---IGLFPDLYTYSILINCFC 57
M + +P P V FN +L +AK + YD V++L+KR+ + I + PDLYT +IL+NCFC
Sbjct: 76 MAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFC 134
Query: 58 KMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVI 117
+ Q S G++++ P++VT +SL+ G C + I +A + +++ G + +V+
Sbjct: 135 RCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVV 194
Query: 118 TYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
LI+ LC+ + AL + K M + PN VTYS +I GLCK G + A+
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAE 248
Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNEL 237
+M + +NPNV+T+++LI + ++ + M+ + PNV + + ++ L
Sbjct: 249 RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL 308
Query: 238 CKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
C + ++D A ++LDLM+ PN TY+TL +GF + +++ +L M G +
Sbjct: 309 CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 368
Query: 298 FSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
S N LI GY + +++ AL ++ + G+ P + +YN + GLF + E+AL F
Sbjct: 369 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 428
Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
MQ D TY I G+C V+ Y
Sbjct: 429 MQKTRNDLDIITYTIMIHGMCKACMVKEAY 458
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 162/341 (47%), Gaps = 38/341 (11%)
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
R F+ + + +++ + +A LF + P+++ +N ++ + +
Sbjct: 40 RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
V +NL+K + N G+ P+ T +I+++ C+ A +M + P
Sbjct: 100 MYDVVINLWKRIENAE---GIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEP 156
Query: 191 NVVTYTSLIHGFCHANDWNEA------------------KGLLIE--------------- 217
++VT +SL++GFC +N +A +LI+
Sbjct: 157 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 216
Query: 218 --MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
M D+G+ PNVV+ + ++ LCK+G++ +A R L M + PN T++ L+D +
Sbjct: 217 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 276
Query: 276 GKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTY 335
GK+++V ++ M M + F+Y+ LI G C + V+EA+ + + + KG P VVTY
Sbjct: 277 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336
Query: 336 NTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
+TL +G F+ + + +KL +M VAA+T + T I G
Sbjct: 337 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 377
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 16 ILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRS 75
IL+ L KN+ L + KR+ G+ P++ TYS LI CK G+++ +
Sbjct: 198 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 257
Query: 76 CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVA 135
PNV+TF++LI ++ + +++ + +PNV TY++LI GLC A
Sbjct: 258 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 317
Query: 136 LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTY 195
+ + M + PN VTYS + +G K VD +L M + N V+
Sbjct: 318 IKMLDLMISKGCT------PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 371
Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
+LI G+ A + A G+ M G+ PN+ S N+++ L NG+++ A + M +
Sbjct: 372 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431
Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
+ TY ++ G C + +LF ++ + D +Y I+I
Sbjct: 432 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 480
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 7/253 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +F+ L+ AK V S++K + + + P+++TYS LI C +V +
Sbjct: 261 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 320
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ PNVVT+++L G SR+ + L + G N ++ NTLI G +
Sbjct: 321 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 380
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G +AL +F MT+ NG I PN +Y+I++ GL G V+KA F M+
Sbjct: 381 AGKIDLALGVFGYMTS-NGLI-----PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+ +++TYT +IHG C A EA L ++ + V+P+ + +++ EL + G M +
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-MRTEAD 493
Query: 249 LLDLMVQCDVRPN 261
L+ Q VR N
Sbjct: 494 ALNRFYQKHVRQN 506
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 184/370 (49%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P S N LL AK D V FK + G P ++TY+I+I+C CK G V +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P+ VT+ S+I G R+ + F ++K CEP+VITYN LIN C+
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + L ++EM GNG KPN V+YS ++D CKEG + +A + ++ M+ L
Sbjct: 345 FGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN TYTSLI C + ++A L EM+ GV+ NVV+ +++ LC +M A
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M V PN +YN L+ GF ++R EL ++ G K D Y I G C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+++E A + NE+ GIK + Y TL F+ L L EM+ D+
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 369 TYRTFIDGLC 378
T+ IDGLC
Sbjct: 579 TFCVLIDGLC 588
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 6/368 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P F+ L L + + F ++ +FP + + L++ F K+G+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++ + P V T+ +I +C E + A LF ++K G P+ +TYN++I+G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + F+EM + + +P+ +TY+ +I+ CK G + E + +MK L
Sbjct: 310 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNVV+Y++L+ FC +A ++M G+ PN + +++ CK G + +A R
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L + M+Q V N TY L+DG C ++ +ELF M++ G + SYN LI+G+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K K ++ AL L NEL +GIKP ++ Y T GL + + E A + EM+ + A++
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 369 TYRTFIDG 376
Y T +D
Sbjct: 544 IYTTLMDA 551
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 201/405 (49%), Gaps = 42/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++N ++ K D + F+ + + PD+ TY+ LINCFCK G++ +G
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ + + PNVV++++L+ C E + +A + ++ G PN TY +LI+ C+
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G+ A L EM ++GV + N VTY+ +IDGLC + +A+ELF +M +
Sbjct: 415 IGNLSDAFRLGNEML----QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN+ +Y +LIHGF A + + A LL E+ +G++P+++ + LC K++ A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK-------INRVKELFVSMESMG--------C 293
+++ M +C ++ N+ Y TLMD + +G ++ +KEL + + + C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 294 KH--------------DDFS-------YNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
K+ +DF + +I+G CK+ +VE A +L+ ++ KG+ P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
Y +L G F+ AL L +M + D Y + + GL
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 177/359 (49%), Gaps = 7/359 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V S++ L+ K + + + +GL P+ YTY+ LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+L+ NVVT+T+LI GLC R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ AL L E+ G G KP+ + Y I GLC ++ AK + +MK +
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N + YT+L+ + + + E LL EM + ++ VV+ V+++ LCKN + A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 249 LLDLMV-QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
+ + ++ NA + ++DG C ++ LF M G D +Y L++G
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
K V EAL+L +++ G+K ++ Y +L GL Q ++A EM G + D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 161/346 (46%), Gaps = 41/346 (11%)
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
R+ P F +L L + EA F+K+K F P + N L++ + G T
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
FK+M IG +P TY+I+ID +CKEG V+ A+ LF +MK+ L P+ V
Sbjct: 245 DVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TY S+I GF ++ EM D +P+V++ N ++N CK GK+ M
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG---------------CKHDDF 298
++PN +Y+TL+D FC G + + + +V M +G CK +
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 299 S--------------------YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
S Y LI+G C + ++EA L+ ++ G+ P + +YN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
HG + + +RAL+L E++G + D Y TFI GLC ++
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++S+N L+ K K+ D L L L G+ PDL Y I C + ++ V+
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ N + +T+L+ E L ++K E V+T+ LI+GLC+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A++ F ++N G + N ++ +IDGLCK+ V+ A LF QM + L
Sbjct: 590 NKLVSKAVDYFNRISNDFG-----LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 189 NPN-----------------------------------VVTYTSLIHGFCHANDWNEAKG 213
P+ ++ YTSL+ G H N +A+
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
L EM+ +G+ P+ V ++ + + G +D A L +++
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 201/367 (54%), Gaps = 6/367 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + L+ K F ++S + PD+ TY+ +I+ FC++G + +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + P+ VTFT LI G C + +A + + GC PNV+TY TLI+GLC+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A L EM +IG+ +PN TY+ I++GLCK G +++A +L + + L
Sbjct: 469 EGDLDSANELLHEM----WKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
N + VTYT+L+ +C + + ++A+ +L EM+ +G+QP +V+ NV+MN C +G +++ +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
LL+ M+ + PNA T+N+L+ +C+ + ++ M S G D +Y L+ G+C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K + ++EA L+ E+ KG +V TY+ L G + ++ A ++F +M+ +AAD
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Query: 369 TYRTFID 375
+ F D
Sbjct: 703 IFDFFSD 709
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 186/368 (50%), Gaps = 11/368 (2%)
Query: 34 FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
F + G+ PD Y+ LI+ FCK G + F + P+V+T+T++I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 94 ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
+VEA LF ++ G EP+ +T+ LING C+ GH A + M
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS----- 453
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
PN VTY+ +IDGLCKEG +D A EL +M L PN+ TY S+++G C + + EA
Sbjct: 454 -PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
L+ E G+ + V+ +M+ CK+G+MD A +L M+ ++P T+N LM+GFC
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
L G + ++L M + G + ++N L+ YC ++ A ++Y ++ +G+ P
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR-----FTYA 388
TY L G + R + A LF EM+G + TY I G R + F
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 389 RRKGNSGN 396
RR+G + +
Sbjct: 693 RREGLAAD 700
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 200/378 (52%), Gaps = 6/378 (1%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V+S+NI++ + + L + G PD+ +YS ++N +C+ G++ + +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+ R PN + S+I LC ++ EA F+++ G P+ + Y TLI+G C+ G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
A F EM + + P+ +TY+ II G C+ G + +A +LF +M + L P
Sbjct: 366 DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
+ VT+T LI+G+C A +A + M+ G PNVV+ +++ LCK G +D+A+ LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
M + ++PN FTYN++++G C +G I +L E+ G D +Y L++ YCK+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
E+++A + E+ KG++PT+VT+N L +G E KL M +A + T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 371 RTFIDGLCVRPQVRFTYA 388
+ + C+R ++ A
Sbjct: 600 NSLVKQYCIRNNLKAATA 617
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 197/370 (53%), Gaps = 7/370 (1%)
Query: 11 VSSFNILLGCLAKNKHYD-TVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIF 69
V S N+ L L+K+ + T + +F+ +G+ ++ +Y+I+I+ C++G++ +
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 70 GRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
+ + P+V+++++++ G C + + L +K G +PN Y ++I LCR
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
A F EM G++ P+TV Y+ +IDG CK G + A + F +M ++
Sbjct: 330 CKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
P+V+TYT++I GFC D EA L EM +G++P+ V+ ++N CK G M +A R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
+ M+Q PN TY TL+DG C G ++ EL M +G + + F+YN ++NG CK
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
+ +EEA+ L E G+ VTY TL + + ++A ++ EM G + T
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 370 YRTFIDGLCV 379
+ ++G C+
Sbjct: 564 FNVLMNGFCL 573
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 46/360 (12%)
Query: 3 HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
H P V ++ ++ + LF + GL PD T++ LIN +CK G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 63 SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
F + ++++ +PNVVT+T+LI GLC E + A L ++ G +PN+ TYN++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 123 INGLCRTGHTIVALNLFKEMTNG------------------NGE-----------IGVVF 153
+NGLC++G+ A+ L E +GE +G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
+P VT++++++G C G ++ ++L M + + PN T+ SL+ +C N+ A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
+ +M +GV P+ + ++ CK M A L M + TY+ L+ GF
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
K +E+F M G D +E +++ +KG +P +
Sbjct: 678 KRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDTI 720
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKN-GKMDNASRLLDLMVQCDVRPNAFTYNTL 268
EA+ + +M++ G+ +V S NV + L K+ K A + + V N +YN +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
+ C G+I L + ME G D SY+ ++NGYC+ E+++ L + KG+
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 329 KPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
KP Y ++ L I + A + F EM + DT Y T IDG C R +R
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 190/369 (51%), Gaps = 8/369 (2%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
+S+FN LL L K L ++ G+ P+L+TY++ I C+ G++ + G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
++ P+V+T+ +LI GLC S+ EA K+ G EP+ TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 131 HTIVALNLFKEMT-NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
+A + + NG F P+ TY +IDGLC EG ++A LF + + +
Sbjct: 336 MVQLAERIVGDAVFNG-------FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
PNV+ Y +LI G + EA L EM ++G+ P V + N+++N LCK G + +A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
+ +M+ P+ FT+N L+ G+ K+ E+ M G D ++YN L+NG CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCT 369
+ E+ + Y + KG P + T+N L L R+ + AL L EM+ V D T
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 370 YRTFIDGLC 378
+ T IDG C
Sbjct: 569 FGTLIDGFC 577
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 192/381 (50%), Gaps = 9/381 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N L+ L KN + ++ + GL PD YTY+ LI +CK G V L I
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G + + F P+ T+ SLI GLC E A ALF + G +PNVI YNTLI GL
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + A L EM+ E G++ P T++I+++GLCK G V A L M +
Sbjct: 404 QGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P++ T+ LIHG+ A +L M+D GV P+V + N ++N LCK K ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
MV+ PN FT+N L++ C K++ L M++ D ++ LI+G+C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 309 KNKEVEEALSLYNEL--PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
KN +++ A +L+ ++ +K + + TYN + H E A KLF EM + D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYK-VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 367 TCTYRTFIDGLCVRPQVRFTY 387
TYR +DG C V Y
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGY 657
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V S+N ++ L + ++D ++ R+ G+ PD+Y+++I + FCK + +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ NVV + +++ G E+ E LF K+ A G + T+N L+ LC+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G L ++ + GV+ PN TY++ I GLC+ G +D A + + +
Sbjct: 229 KGDVKECEKLLDKVI----KRGVL--PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+V+TY +LI+G C + + EA+ L +MV++G++P+ + N ++ CK G + A R
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
++ V P+ FTY +L+DG C G+ NR LF G K + YN LI G
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIR---------------------- 346
+ EA L NE+ KG+ P V T+N L +GL ++
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 347 -------------QAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ E AL++ M N V D TY + ++GLC
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 6/349 (1%)
Query: 30 VLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIK 89
+++F+R++ P +++Y+ +++ G ++ R+ P+V +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 90 GLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEI 149
C SR A L + + GCE NV+ Y T++ G LF +M +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 150 GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
+ T++ ++ LCK+G V + ++L ++ + PN+ TY I G C + +
Sbjct: 215 CL------STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
A ++ +++QG +P+V++ N ++ LCKN K A L MV + P+++TYNTL+
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
G+C G + + + G D F+Y LI+G C E AL+L+NE KGIK
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
P V+ YNTL GL A +L EM + + T+ ++GLC
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 153/322 (47%), Gaps = 6/322 (1%)
Query: 56 FCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPN 115
+ + G+V +F R+ P V ++ +++ L +A ++ +++ G P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 116 VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDK 175
V ++ + C+T AL L M++ E+ N V Y ++ G +E F +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM------NVVAYCTVVGGFYEENFKAE 199
Query: 176 AKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMN 235
ELF +M ++ + T+ L+ C D E + LL +++ +GV PN+ + N+ +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
LC+ G++D A R++ +++ +P+ TYN L+ G C K + M + G +
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
D ++YN LI GYCK V+ A + + F G P TY +L GL + RAL LF
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 356 VEMQGNDVAADTCTYRTFIDGL 377
E G + + Y T I GL
Sbjct: 380 NEALGKGIKPNVILYNTLIKGL 401
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 7/326 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N L+ L+ L ++ GL P++ T++IL+N CKMG VS +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ + P++ TF LI G + ++ A + + G +P+V TYN+L+NGLC+
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
T + +K M E G PN T++I+++ LC+ +D+A L +MK +++
Sbjct: 509 TSKFEDVMETYKTMV----EKGCA--PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNAS 247
NP+ VT+ +LI GFC D + A L +M + V + + N+I++ + + A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
+L MV + P+ +TY ++DGFC TG +N + + M G + +IN
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVV 333
C V EA + + + KG+ P V
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 6/295 (2%)
Query: 84 FTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMT 143
+ +K + ++ EA +F ++ + CEP V +YN +++ L +G+ A ++ M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 144 NGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFC 203
+ P+ +++I + CK A L M + NVV Y +++ GF
Sbjct: 139 DRG------ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
N E L +M+ GV + + N ++ LCK G + +LLD +++ V PN F
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
TYN + G C G+++ + + G K D +YN LI G CKN + +EA ++
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+G++P TYNTL G + + A ++ + N D TYR+ IDGLC
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 44/298 (14%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +FNIL+ L K L K + S G FPD++T++ILI+ + ++ I
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+L + P+V T+ SL+ GLC S+ + + + GC PN+ T+N L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK---- 184
AL L +EM N + P+ VT+ +IDG CK G +D A LF +M+
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 185 ---------------YENLN-----------------PNVVTYTSLIHGFCHANDWNEAK 212
E LN P+ TY ++ GFC + N
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
L+EM++ G P++ + ++N LC ++ A+ ++ MVQ + P A NT+ D
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV- 193
AL +F M E+G FK TY +I+ L G + +E+ + M+ EN+ +++
Sbjct: 23 ALEMFNSMRK---EVG--FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLE 76
Query: 194 -TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
Y + + EA + M +P V S N IM+ L +G D A ++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
M + P+ +++ M FC T + + L +M S GC+ + +Y ++ G+ +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
E L+ ++ G+ + T+N L L + + KL ++ V + TY
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 373 FIDGLCVRPQV 383
FI GLC R ++
Sbjct: 257 FIQGLCQRGEL 267
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 175 KAKELFLQMKYE-NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
KA E+F M+ E + TY S+I + + + +L++M + V +++ +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYV 80
Query: 234 --MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
M + GK+ A + + M D P F+YN +M +G ++ ++++ M
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
G D +S+ I + +CK AL L N + +G + VV Y T+ G +E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 352 LKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
+LF +M + V+ T+ + LC + V+
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 193/374 (51%), Gaps = 9/374 (2%)
Query: 13 SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
SFN+++ L K + D + +F+ + PD YTY L++ CK ++ ++ +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 73 LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
+P+ V + LI GLC + + L + GC PN +TYNTLI+GLC G
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
A++L + M + PN VTY +I+GL K+ A L M+ + N
Sbjct: 309 DKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
Y+ LI G EA L +M ++G +PN+V +V+++ LC+ GK + A +L+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
M+ PNA+TY++LM GF TG +++ M+ GC + F Y++LI+G C
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM---QGNDVAADTCT 369
V+EA+ +++++ GIKP V Y+++ GL I + ALKL+ EM + D T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 370 YRTFIDGLCVRPQV 383
Y +DGLC++ +
Sbjct: 543 YNILLDGLCMQKDI 556
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 175/341 (51%), Gaps = 10/341 (2%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
SP PV +N+L+ L K V L + G P+ TY+ LI+ C G++
Sbjct: 254 SPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
+ R++ S PN VT+ +LI GL + R +A L + ++ G N Y+ LI+GL
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
+ G A++L+++M E G KPN V YS+++DGLC+EG ++AKE+ +M
Sbjct: 373 FKEGKAEEAMSLWRKM----AEKGC--KPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
PN TY+SL+ GF EA + EM G N +V+++ LC G++ A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM---ESMGCKHDDFSYNIL 303
+ M+ ++P+ Y++++ G C G ++ +L+ M E + D +YNIL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
++G C K++ A+ L N + +G P V+T NT + L E
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 146/281 (51%), Gaps = 3/281 (1%)
Query: 99 EAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNT 157
+A LF ++ F C+ +V ++N+++N + G L + + N N + + PN
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187
Query: 158 VTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIE 217
++++++I LCK FVD+A E+F M P+ TY +L+ G C +EA LL E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 218 MVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK 277
M +G P+ V NV+++ LCK G + ++L+D M PN TYNTL+ G CL GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 278 INRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNT 337
+++ L M S C +D +Y LING K + +A+ L + + +G Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 338 LFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
L GLF+ +AE A+ L+ +M + Y +DGLC
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 19/272 (6%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +++L+ L + + + R+ + G P+ YTYS L+ F K G +
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ + ++ + N ++ LI GLC R+ EA +++K+ G +P+ + Y+++I GLC
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G AL L+ EM +P+ VTY+I++DGLC + + +A +L M
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKS---QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Query: 189 NPNVVTYTSLIHGFCH-ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
+P+V+T + ++ +N ++ + L E+V + L K ++ A
Sbjct: 572 DPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR---------------LLKRQRVSGAC 616
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
++++M+ + P T+ ++ C KIN
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 5/236 (2%)
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
FK T S +I+ G D ++L +++ EN ++ + + A+ ++A
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 213 GLLIEMVDQ-GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCD----VRPNAFTYNT 267
L MVD+ + +V S N ++N + G D +V + + PN ++N
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
++ C ++R E+F M C D ++Y L++G CK + ++EA+ L +E+ +G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
P+ V YN L GL + R KL M + TY T I GLC++ ++
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+++L+ L + ++ ++ +IG+ PD YS +I C +G + ++ +L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 74 ---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL---- 126
P+VVT+ L+ GLC + I A L + GC+P+VIT NT +N L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 127 --CRTGHT----IVALNLFKEMTNGNGEI-----GVVFKPNTVTYSIIIDGLCKEGFVDK 175
C G + +V L ++ +G I G P T T+++I+ +CK ++
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 176 A 176
A
Sbjct: 650 A 650
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 197/375 (52%), Gaps = 7/375 (1%)
Query: 2 RHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQ 61
R M SP + +IL G L + + +D+V ++ + S GL PD++ Y +L C K G
Sbjct: 156 REMKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGL 214
Query: 62 VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
S + + PNV +T I LC ++++ EA +F +K G PN+ TY+
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
+I+G C+TG+ A L+KE+ PN V + ++DG CK + A+ LF+
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
M ++PN+ Y LIHG C + + EA GLL EM + P+V + +++N LC
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
++ A+RL M + P++ TYN+L+ G+C + + +L M + G + + +++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
LI+GYC ++++ A+ LY E+ KGI P VVTY L F+ + AL+L+ +M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 362 DVAADTCTYRTFIDG 376
+ + T+ +DG
Sbjct: 509 GIHPNDHTFACLVDG 523
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 41/385 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V + I + L ++ + +F+ + G+ P+LYTYS +I+ +CK G V + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ IL + PNVV F +L+ G C +V A +LF + FG +PN+ YN LI+G C+
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G+ + A+ L EM + N P+ TY+I+I+GLC E V +A LF +MK E +
Sbjct: 352 SGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 189 -----------------------------------NPNVVTYTSLIHGFCHANDWNEAKG 213
PN++T+++LI G+C+ D A G
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
L EM +G+ P+VV+ +++ K M A RL M++ + PN T+ L+DGF
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
G+++ + + + + LI G C+N + A ++++ GI P +
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 334 TYNTLFHGLFEIRQAERALKLFVEM 358
+Y ++ G + ++ + L +M
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDM 610
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 15/340 (4%)
Query: 39 SIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIV 98
SIG+F S+LI F +MG + R ++ +P+ S++ GL R
Sbjct: 131 SIGVF------SLLIMEFLEMGLFEEALWV-SREMKC--SPDSKACLSILNGLVRRRRFD 181
Query: 99 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTV 158
+ + + G P+V Y L + G L EMT+ +G+ KPN
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS----LGI--KPNVY 235
Query: 159 TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEM 218
Y+I I LC++ +++A+++F MK + PN+ TY+++I G+C + +A GL E+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 219 VDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKI 278
+ + PNVV +++ CK ++ A L MV+ V PN + YN L+ G C +G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 279 NRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTL 338
L MES+ D F+Y ILING C +V EA L+ ++ + I P+ TYN+L
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 339 FHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
HG + E+AL L EM + V + T+ T IDG C
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 153/355 (43%), Gaps = 41/355 (11%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V F L+ K + T SLF + G+ P+LY Y+ LI+ CK G + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +P+V T+T LI GLC E ++ EA LF K+K P+ TYN+LI+G C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ AL+L EMT E PN +T+S +IDG C + A L+ +M + +
Sbjct: 422 EYNMEQALDLCSEMTASGVE------PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN---------------------- 226
P+VVTYT+LI + EA L +M++ G+ PN
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 227 -------------VVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
V ++ LC+NG + ASR M C + P+ +Y +++ G
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI 328
+I L M G + +L Y N V+ A L N K +
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
+ + LF+E + E+ P++ I++GL + D + M L P+V
Sbjct: 143 LEMGLFEEALWVSREMKC--SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
Y L +++ + LL EM G++PNV + + +LC++ KM+ A ++ +LM
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ V PN +TY+ ++DG+C TG + + L+ + + + L++G+CK +E+
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
A SL+ + G+ P + YN L HG + A+ L EM+ +++ D TY
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 374 IDGLCVRPQV 383
I+GLC+ QV
Sbjct: 381 INGLCIEDQV 390
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 191 NVVTYTSLIHGFCHANDWNEAKGL---LIEMVDQGVQPNVVSS----------------- 230
++ +++++IH A+ + A+ L LIE + + +P+ +S
Sbjct: 74 DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG 133
Query: 231 --NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
++++ E + G + A L + + P++ ++++G + + V + M
Sbjct: 134 VFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
S G D Y +L K + L +E+ GIKP V Y L +
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRK 391
E A K+F M+ + V + TY IDG C VR Y K
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL---- 64
P +FN ++ L K + + R+ G PD TY L+N CK+G+V
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 65 -----------------GFVIFGR-----------ILRSCFAPNVVTFTSLIKGLCAESR 96
GFV GR + P+V T+ SLI G E
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 97 IVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPN 156
+ A + ++ GC+PNV +Y L++G C+ G A N+ EM+ KPN
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG------LKPN 458
Query: 157 TVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLI 216
TV ++ +I CKE + +A E+F +M + P+V T+ SLI G C ++ A LL
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 217 EMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTG 276
+M+ +GV N V+ N ++N + G++ A +L++ MV + TYN+L+ G C G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 277 KINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYN 336
++++ + LF M G + S NILING C++ VEEA+ E+ +G P +VT+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 337 TLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+L +GL + E L +F ++Q + DT T+ T + LC
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 198/385 (51%), Gaps = 11/385 (2%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
MR+++ P S+N++L L + ++F + S + P L+T+ +++ FC +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
++ + + + PN V + +LI L +R+ EA L ++ GC P+ T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
+I GLC+ A + M F P+ +TY +++GLCK G VD AK+LF
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRG------FAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ-GVQPNVVSSNVIMNELCK 239
Y P +V + +LIHGF ++AK +L +MV G+ P+V + N ++ K
Sbjct: 346 ----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 240 NGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFS 299
G + A +L M +PN ++Y L+DGFC GKI+ + M + G K +
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 300 YNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQ 359
+N LI+ +CK + EA+ ++ E+P KG KP V T+N+L GL E+ + + AL L +M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 360 GNDVAADTCTYRTFIDGLCVRPQVR 384
V A+T TY T I+ R +++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIK 546
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 180/342 (52%), Gaps = 6/342 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++N L+ K L + + + G P++Y+Y+IL++ FCK+G++ + +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ PN V F LI C E RI EA +F ++ GC+P+V T+N+LI+GLC
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
AL L ++M + GVV NTVTY+ +I+ + G + +A++L +M ++
Sbjct: 507 VDEIKHALWLLRDMISE----GVV--ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+ +TY SLI G C A + ++A+ L +M+ G P+ +S N+++N LC++G ++ A
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
MV P+ T+N+L++G C G+I +F +++ G D ++N L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER 350
K V +A L +E G P T++ L + +R
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
SP ++N L+ L + D SLF+++ G P + +ILIN C+ G V
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
++ P++VTF SLI GLC RI + +F KL+A G P+ +T+NTL++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 127 CRTGHTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
C+ G A L E + +G F PN T+SI++ + + +D+ +
Sbjct: 680 CKGGFVYDACLLLDEGIEDG-------FVPNHRTWSILLQSIIPQETLDRRR 724
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 6/245 (2%)
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
++ LF + NG ++ + Y ++I L G L +QMK E +
Sbjct: 94 SMELFSWTGSQNG-----YRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL 148
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVD-QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
+ S++ + A + L++EM + +P S NV++ L A+ + M
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ + P FT+ +M FC +I+ L M GC + Y LI+ K V
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
EAL L E+ G P T+N + GL + + A K+ M A D TY
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 374 IDGLC 378
++GLC
Sbjct: 329 MNGLC 333
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 196/377 (51%), Gaps = 9/377 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++N ++ K + + ++ GL PD +TY+ LI +C+ + F +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 69 FGRI-LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
F + L+ C N V +T LI GLC RI EA LF K+K C P V TY LI LC
Sbjct: 276 FNEMPLKGC-RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ ALNL KEM E G+ KPN TY+++ID LC + +KA+EL QM +
Sbjct: 335 GSERKSEALNLVKEME----ETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
L PNV+TY +LI+G+C +A ++ M + + PN + N ++ CK+ + A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
+L+ M++ V P+ TYN+L+DG C +G + L M G D ++Y +I+
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
CK+K VEEA L++ L KG+ P VV Y L G + + + A + +M + ++
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 368 CTYRTFIDGLCVRPQVR 384
T+ I GLC +++
Sbjct: 568 LTFNALIHGLCADGKLK 584
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 12/385 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++ +L+ L ++ L ++ GL P++ TY+ LIN +CK G + +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +PN T+ LIKG C +S + +A + K+ P+V+TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G+ A L M + G+V P+ TY+ +ID LCK V++A +LF ++ + +
Sbjct: 475 SGNFDSAYRLLSLMNDR----GLV--PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
NPNVV YT+LI G+C A +EA +L +M+ + PN ++ N +++ LC +GK+ A+
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L + MV+ ++P T L+ G + F M S G K D +Y I YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ + +A + ++ G+ P + TY++L G ++ Q A + M+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 369 TYRTFIDGLCVRPQVRFTYARRKGN 393
T+ + I L + Y ++KG+
Sbjct: 709 TFLSLIKHL-----LEMKYGKQKGS 728
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 178/360 (49%), Gaps = 12/360 (3%)
Query: 30 VLSLFKRLNSIGLFPDLYT-----YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTF 84
VL L +++N F Y Y+ L+N + G V ++ +L PN+ T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 85 TSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN 144
++ G C + EA +K+ G +P+ TY +LI G C+ A +F EM
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 145 GNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCH 204
+ N V Y+ +I GLC +D+A +LF++MK + P V TYT LI C
Sbjct: 282 KG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 205 ANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFT 264
+ +EA L+ EM + G++PN+ + V+++ LC K + A LL M++ + PN T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 265 YNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELP 324
YN L++G+C G I ++ MES + +YN LI GYCK+ V +A+ + N++
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 325 FKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
+ + P VVTYN+L G + A +L M + D TY + ID LC +V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 25/388 (6%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++ ++ L K+K + LF L G+ P++ Y+ LI+ +CK G+V ++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++L PN +TF +LI GLCA+ ++ EA L K+ G +P V T LI+ L +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A + F++M + KP+ TY+ I C+EG + A+++ +M+ +
Sbjct: 615 DGDFDHAYSRFQQMLSSGT------KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPN------VVSSNVIMN------- 235
+P++ TY+SLI G+ N A +L M D G +P+ ++ + M
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 236 --ELCKNGKM---DNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME- 289
ELC M D LL+ MV+ V PNA +Y L+ G C G + +++F M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAE 349
+ G + +N L++ CK K+ EA + +++ G P + + L GL++ + E
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 350 RALKLFVEMQGNDVAADTCTYRTFIDGL 377
R +F + D ++ IDG+
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 157/368 (42%), Gaps = 52/368 (14%)
Query: 46 LYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFT 105
+Y+Y+ L+ G V + F I +++SC + V + LC + E L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179
Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIID 165
KL GC YNTL+N L R G ++ EM PN TY+ +++
Sbjct: 180 KL-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK------VCPNIYTYNKMVN 226
Query: 166 GLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDW----------------- 208
G CK G V++A + ++ L+P+ TYTSLI G+C D
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 209 ------------------NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
+EA L ++M D P V + V++ LC + + A L+
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
M + ++PN TY L+D C K + +EL M G + +YN LINGYCK
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
+E+A+ + + + + P TYN L G + +A+ + +M V D TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 371 RTFIDGLC 378
+ IDG C
Sbjct: 466 NSLIDGQC 473
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 1/263 (0%)
Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
+I G + L+L ++M N + + +K Y+ +++ L + G VD+ K++++
Sbjct: 149 MIKSCDSVGDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
+M + + PN+ TY +++G+C + EA + ++V+ G+ P+ + ++ C+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 242 KMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
+D+A ++ + M R N Y L+ G C+ +I+ +LFV M+ C +Y
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 302 ILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN 361
+LI C ++ EAL+L E+ GIKP + TY L L + E+A +L +M
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 362 DVAADTCTYRTFIDGLCVRPQVR 384
+ + TY I+G C R +
Sbjct: 388 GLMPNVITYNALINGYCKRGMIE 410
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 25/352 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +FN L+ L + L +++ IGL P + T +ILI+ K G +
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++L S P+ T+T+ I+ C E R+++A + K++ G P++ TY++LI G
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF---------------- 172
G T A ++ K M + E P+ T+ +I L + +
Sbjct: 685 LGQTNFAFDVLKRMRDTGCE------PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 173 --VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV-DQGVQPNVVS 229
D EL +M ++ PN +Y LI G C + A+ + M ++G+ P+ +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 230 SNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME 289
N +++ CK K + A++++D M+ P + L+ G G+ R +F ++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 290 SMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
G D+ ++ I+I+G K VE L+N + G K + TY+ L G
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 208/405 (51%), Gaps = 42/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + FN LL + + ++ S F N + D+Y++ ILI C+ G++ F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALF------------------------ 104
+ F+PNVV +T+LI G C + I +A LF
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 105 -----------TKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
K++ G PN+ TYN ++N LC+ G T A +F EM E GV
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGV-- 299
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
N VTY+ +I GLC+E +++A ++ QMK + +NPN++TY +LI GFC +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
L ++ +G+ P++V+ N++++ C+ G A++++ M + ++P+ TY L+D F
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+ + + +L +SME +G D +Y++LI+G+C ++ EA L+ + K +P V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
YNT+ G + + RALKL EM+ ++A + +YR I+ LC
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 187/359 (52%), Gaps = 6/359 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V + L+ K + LF + +GL + TY++LIN K G GF +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ ++ PN+ T+ ++ LC + R +A +F +++ G N++TYNTLI GLCR
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ LN ++ + G+ PN +TY+ +IDG C G + KA L +K L
Sbjct: 316 E----MKLNEANKVVDQMKSDGI--NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P++VTY L+ GFC D + A ++ EM ++G++P+ V+ ++++ ++ M+ A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M + + P+ TY+ L+ GFC+ G++N LF SM C+ ++ YN +I GYC
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
K AL L E+ K + P V +Y + L + R+++ A +L +M + + T
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 192/370 (51%), Gaps = 7/370 (1%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+ +++ +++ + +S F + G P ++ L+ + + F
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 74 RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTI 133
+S +V +F LIKG C I ++ L +L FG PNV+ Y TLI+G C+ G
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 134 VALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVV 193
A +LF EM G++G+V N TY+++I+GL K G + E++ +M+ + + PN+
Sbjct: 216 KAKDLFFEM----GKLGLV--ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 194 TYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
TY +++ C +A + EM ++GV N+V+ N ++ LC+ K++ A++++D M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 254 VQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEV 313
+ PN TYNTL+DGFC GK+ + L ++S G +YNIL++G+C+ +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 314 EEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTF 373
A + E+ +GIKP+ VTY L E+A++L + M+ + D TY
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 374 IDGLCVRPQV 383
I G C++ Q+
Sbjct: 450 IHGFCIKGQM 459
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 34/250 (13%)
Query: 163 IIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQG 222
+I G F + L + E Y +I+ + + N + EMVD G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 223 VQP----------------------------------NVVSSNVIMNELCKNGKMDNASR 248
P +V S +++ C+ G+++ +
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
LL + + PN Y TL+DG C G+I + K+LF M +G ++ +Y +LING
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
KN ++ +Y ++ G+ P + TYN + + L + + + A ++F EM+ V+ +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 369 TYRTFIDGLC 378
TY T I GLC
Sbjct: 305 TYNTLIGGLC 314
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 194/370 (52%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V + + LL L K +H+ + LF + S+G+ PD+Y Y+ +I C++ +S +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ + N+V + LI GLC + ++ EA + L +P+V+TY TL+ GLC+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ L + EM + + F P+ S +++GL K G +++A L ++ +
Sbjct: 310 VQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+PN+ Y +LI C ++EA+ L M G++PN V+ +++++ C+ GK+D A
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L MV ++ + + YN+L++G C G I+ + M + + +Y L+ GYC
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
++ +AL LY+E+ KGI P++ T+ TL GLF A+KLF EM +V +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 369 TYRTFIDGLC 378
TY I+G C
Sbjct: 544 TYNVMIEGYC 553
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 188/370 (50%), Gaps = 10/370 (2%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
+ +N+L+ L K + + + K L L PD+ TY L+ CK+ + +G +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+L F+P+ +SL++GL +I EA L ++ FG PN+ YN LI+ LC+
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
A LF M G+IG+ +PN VTYSI+ID C+ G +D A +M L
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
+V Y SLI+G C D + A+G + EM+++ ++P VV+ +M C GK++ A RL
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
M + P+ +T+ TL+ G G I +LF M K + +YN++I GYC+
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE--MQGNDVAADTC 368
++ +A E+ KGI P +Y L HGL QA A K+FV+ +GN + C
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEIC 614
Query: 369 TYRTFIDGLC 378
Y + G C
Sbjct: 615 -YTGLLHGFC 623
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 185/371 (49%), Gaps = 9/371 (2%)
Query: 6 PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
PS VSS L+ L K + L+L KR+ G+ P+L+ Y+ LI+ CK +
Sbjct: 330 PSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 66 FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
++F R+ + PN VT++ LI C ++ A + ++ G + +V YN+LING
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
C+ G A EM N +P VTY+ ++ G C +G ++KA L+ +M
Sbjct: 447 HCKFGDISAAEGFMAEMINKK------LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
+ + P++ T+T+L+ G A +A L EM + V+PN V+ NV++ C+ G M
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
A L M + + P+ ++Y L+ G CLTG+ + K + C+ ++ Y L++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
G+C+ ++EEALS+ E+ +G+ +V Y L G + + + L EM +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 366 DTCTYRTFIDG 376
D Y + ID
Sbjct: 681 DDVIYTSMIDA 691
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 177/370 (47%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +N L+ L K + + LF R+ IGL P+ TYSILI+ FC+ G++
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G ++ + +V + SLI G C I A ++ EP V+TY +L+ G C
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G AL L+ EMT G G P+ T++ ++ GL + G + A +LF +M N+
Sbjct: 485 KGKINKALRLYHEMT-GKG-----IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN VTY +I G+C D ++A L EM ++G+ P+ S +++ LC G+ A
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+D + + + N Y L+ GFC GK+ + M G D Y +LI+G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K+K+ + L E+ +G+KP V Y ++ + + A ++ M +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 369 TYRTFIDGLC 378
TY I+GLC
Sbjct: 719 TYTAVINGLC 728
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 195/447 (43%), Gaps = 78/447 (17%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +++IL+ + DT LS + GL +Y Y+ LIN CK G +S
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ P VVT+TSL+ G C++ +I +A L+ ++ G P++ T+ TL++GL R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A+ LF EM N KPN VTY+++I+G C+EG + KA E +M + +
Sbjct: 520 AGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 189 NP-----------------------------------NVVTYTSLIHGFCHANDWNEAK- 212
P N + YT L+HGFC EA
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 213 ----------------------------------GLLIEMVDQGVQPNVVSSNVIMNELC 238
GLL EM D+G++P+ V +++
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
K G A + DLM+ PN TY +++G C G +N + L M+ + +
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 299 SYNILINGYCKNK-EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVE 357
+Y ++ K + ++++A+ L+N + KG+ TYN L G + E A +L
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 358 MQGNDVAADTCTYRTFIDGLCVRPQVR 384
M G+ V+ D TY T I+ LC R V+
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVK 839
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 179/403 (44%), Gaps = 49/403 (12%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +F LL L + + LF + + P+ TY+++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ P+ ++ LI GLC + EA L CE N I Y L++G CR
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL----QMK 184
G AL++ +EM ++ + V Y ++IDG K K ++LF +M
Sbjct: 625 EGKLEEALSVCQEMVQRGVDL------DLVCYGVLIDGSLKH----KDRKLFFGLLKEMH 674
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
L P+ V YTS+I D+ EA G+ M+++G PN V+ ++N LCK G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 245 NASRL-------------------LDLMVQCDVR----------------PNAFTYNTLM 269
A L LD++ + +V N TYN L+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
GFC G+I EL M G D +Y +IN C+ +V++A+ L+N + KGI+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 330 PTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRT 372
P V YNTL HG + +A +L EM + + T RT
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 7/296 (2%)
Query: 84 FTSLIKGLCAESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEM 142
F LI+ R+++ +F + P V T + L++GL + H +A+ LF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 143 TNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
+ V +P+ Y+ +I LC+ + +AKE+ M+ + N+V Y LI G
Sbjct: 219 ------VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
C EA G+ ++ + ++P+VV+ ++ LCK + + ++D M+ P+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
++L++G GKI L + G + F YN LI+ CK ++ EA L++
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ G++P VTY+ L + + AL EM + Y + I+G C
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 119 YNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKE 178
++ LI R+ + + +FK M V P T S ++ GL K A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITK-----VSLLPEVRTLSALLHGLVKFRHFGLAME 213
Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
LF M + P+V YT +I C D + AK ++ M G N+V NV+++ LC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
K K+ A + + D++P+ TY TL+ G C + E+ M + +
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
+ + L+ G K ++EEAL+L + G+ P + YN L L + R+ A LF M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 359 QGNDVAADTCTYRTFIDGLCVRPQV 383
+ + TY ID C R ++
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKL 418
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 7/376 (1%)
Query: 9 PPVSSFNIL-LGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFV 67
P SS+ ++ +GC K + L + G PD T ++++ C+ G V+
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 273
Query: 68 IFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
F +++ F PN++ FTSLI GLC + I +A + ++ G +PNV T+ LI+GLC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ G T A LF ++ + +KPN TY+ +I G CKE +++A+ LF +MK +
Sbjct: 334 KRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
L PNV TYT+LI+G C A + A L+ M D+G PN+ + N ++ LCK + A
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
LL+ C + + TY L+ C IN+ F M G + D NILI +
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
C+ K+++E+ L+ + G+ PT TY ++ + + ALK F M+ + D+
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 368 CTYRTFIDGLCVRPQV 383
TY + I GLC + V
Sbjct: 569 FTYGSLISGLCKKSMV 584
Score = 191 bits (485), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 10/376 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +F L+ L K + + + G P++YT++ LI+ CK G F +
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 69 FGRILRS-CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLC 127
F +++RS + PNV T+TS+I G C E ++ A LF+++K G PNV TY TLING C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ G + E+ N G+ G F PN TY+ ID LCK+ +A EL +
Sbjct: 405 KAG----SFGRAYELMNLMGDEG--FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
L + VTYT LI C ND N+A M G + ++ +N+++ C+ KM +
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
RL L+V + P TY +++ +C G I+ + F +M+ GC D F+Y LI+G
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
CK V+EA LY + +G+ P VT TL + + + A+ L + D
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWI 635
Query: 368 CTYRTFIDGLCVRPQV 383
T RT + LC +V
Sbjct: 636 RTVRTLVRKLCSEKKV 651
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 44/354 (12%)
Query: 33 LFKRLNSIGLFPDLYTYSIL-INCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGL 91
+F ++ G+ PD +Y ++ I CF + G++ +++ F P+ T T ++ L
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 92 CAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGV 151
C + A F K+ G +PN+I + +LI+GLC+ G A + +EM NG
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG---- 317
Query: 152 VFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ-MKYENLNPNVVTYTSLIHGFCHANDWNE 210
+KPN T++ +IDGLCK G+ +KA LFL+ ++ + PNV TYTS+I G+
Sbjct: 318 -WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY-------- 368
Query: 211 AKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMD 270
CK K++ A L M + + PN TY TL++
Sbjct: 369 ---------------------------CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 271 GFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKP 330
G C G R EL M G + ++YN I+ CK EA L N+ G++
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
VTY L + +AL F M AD I C + +++
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 7/293 (2%)
Query: 96 RIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKP 155
R+ EA + ++ G P+ IT N ++ G A N+F EM+ GVV P
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR----GVV--P 215
Query: 156 NTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLL 215
++ +Y +++ G ++G + +A M P+ T T ++ C N A
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 216 IEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLT 275
+M+D G +PN+++ +++ LCK G + A +L+ MV+ +PN +T+ L+DG C
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 276 GKINRVKELFVSM-ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVT 334
G + LF+ + S K + +Y +I GYCK ++ A L++ + +G+ P V T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 335 YNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
Y TL +G + RA +L M + TY ID LC + + Y
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNL--FKEMTNGNGEIGVV------ 152
A F K + F V + L NG + H ++ L F E+ N +G+V
Sbjct: 117 AVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQ 176
Query: 153 -FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEA 211
P+++T + +++ + G ++ A+ +F +M + P+ +Y ++ G EA
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 212 KGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDG 271
L M+ +G P+ + +I+ LC+NG ++ A M+ +PN + +L+DG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 272 FCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGI-KP 330
C G I + E+ M G K + +++ LI+G CK E+A L+ +L KP
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 331 TVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
V TY ++ G + + RA LF M+ + + TY T I+G C
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 160 YSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMV 219
Y + D L G + KA E+ M + F NEA G++++M
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174
Query: 220 DQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKIN 279
+QG+ P+ ++ N ++ + G ++ A + D M V P++ +Y ++ G GKI
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
M G D+ + +++ C+N V A+ + ++ G KP ++ + +L
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 340 HGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVR 380
GL + ++A ++ EM N + T+ IDGLC R
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 10/379 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P S+++ +L L + LF+ + GL D+YTY+I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + PNVVT+T+LI ++ A LF + + GC PN++TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 129 TGHTIVALNLFKEMTNGNG--EIGVVFK--------PNTVTYSIIIDGLCKEGFVDKAKE 178
G A +F+ M ++ + FK PN VTY ++DG CK V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 179 LFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC 238
L M E PN + Y +LI G C +EA+ + EM + G + + + +++
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 239 KNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDF 298
K + D AS++L M++ PN Y ++DG C GK + +L ME GC+ +
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 299 SYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
+Y +I+G+ ++E L L + KG+ P VTY L + + A L EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 359 QGNDVAADTCTYRTFIDGL 377
+ T YR I+G
Sbjct: 841 KQTHWPTHTAGYRKVIEGF 859
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 25/384 (6%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
VSSF CL Y+ S+ + + G PD TYS ++N C ++ L F++F
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+ R +V T+T ++ C I +A F +++ GC PNV+TY LI+ +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM------- 183
A LF+ M + G + PN VTYS +IDG CK G V+KA ++F +M
Sbjct: 568 KVSYANELFETMLSE----GCL--PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 184 -------KYEN--LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIM 234
+Y++ PNVVTY +L+ GFC ++ EA+ LL M +G +PN + + ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 235 NELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
+ LCK GK+D A + M + +TY++L+D + + + ++ M C
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
+ Y +I+G CK + +EA L + KG +P VVTY + G I + E L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 355 FVEMQGNDVAADTCTYRTFIDGLC 378
M VA + TYR ID C
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCC 825
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 64/435 (14%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
MR P V+ +L GCL K K + + G +P ++ L++ +C G
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLC----------------AESRIVEAAALF 104
S + + ++++ P V + LI +C A S ++ A +
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 105 TKL----------------KAF---------GCEPNVITYNTLINGLCRTGHTIVALNLF 139
K+ KAF G P+ TY+ ++N LC +A LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 140 KEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI 199
+EM G G+V + TY+I++D CK G +++A++ F +M+ PNVVTYT+LI
Sbjct: 507 EEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 200 HGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DV 258
H + A + A L M+ +G PN+V+ + +++ CK G+++ A ++ + M DV
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 259 ---------------RPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNIL 303
RPN TY L+DGFC + ++ ++L +M GC+ + Y+ L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 304 INGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
I+G CK +++EA + E+ G T+ TY++L F++++ + A K+ +M N
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 364 AADTCTYRTFIDGLC 378
A + Y IDGLC
Sbjct: 741 APNVVIYTEMIDGLC 755
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 184/407 (45%), Gaps = 31/407 (7%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ L+ K K LF+ + S G P++ TYS LI+ CK GQV I
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 69 FGRILRS----------------CFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGC 112
F R+ S PNVVT+ +L+ G C R+ EA L + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 113 EPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGF 172
EPN I Y+ LI+GLC+ G A + EM+ F TYS +ID K
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG------FPATLYTYSSLIDRYFKVKR 724
Query: 173 VDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNV 232
D A ++ +M + PNVV YT +I G C +EA L+ M ++G QPNVV+
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 233 IMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMG 292
+++ GK++ LL+ M V PN TY L+D C G ++ L M+
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 293 CKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
Y +I G+ NKE E+L L +E+ P + Y L L + ++ E AL
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 353 KLFVEMQ--GNDVAADTCTYRTFIDGLCVRPQVR-----FTYARRKG 392
+L E+ + + TY + I+ LC+ +V F+ +KG
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P S++N L+ K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITY--------- 119
+ F P+ V +T LI GLC S EA +++A C PNV+TY
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 120 --------------------------NTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
N+L++ C +G A L K+M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG------H 403
Query: 154 KPNTVTYSIIIDGLCKE------GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHAND 207
P V Y+I+I +C + +D A++ + +M + N + +S C A
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT 267
+ +A ++ EM+ QG P+ + + ++N LC KM+ A L + M + + + +TY
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 268 LMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKG 327
++D FC G I + ++ F M +GC + +Y LI+ Y K K+V A L+ + +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 328 IKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
P +VTY+ L G + Q E+A ++F M G+ D Y D RP V
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 10/320 (3%)
Query: 4 MHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVS 63
M P ++ L+ L K D + ++ G LYTYS LI+ + K+ +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 64 LGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLI 123
L + ++L + APNVV +T +I GLC + EA L ++ GC+PNV+TY +I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 124 NGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQM 183
+G G L L + M G GV PN VTY ++ID CK G +D A L +M
Sbjct: 787 DGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 184 KYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKM 243
K + + Y +I GF ++ E+ GLL E+ P + ++++ L K ++
Sbjct: 841 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 244 DNASRLLDLMV--QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYN 301
+ A RLL+ + + + TYN+L++ CL K+ +LF M G + S+
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 302 ILINGYCKNKEVEEALSLYN 321
LI G +N ++ EAL L +
Sbjct: 959 SLIKGLFRNSKISEALLLLD 978
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)
Query: 51 ILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAF 110
+L+ C+ G S+ GR+ F P+ T+ LI+ R+ A+ + ++
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 111 GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE 170
+ T LC+ G AL L E N F P+TV Y+ +I GLC+
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLV-ETEN--------FVPDTVFYTKLISGLCEA 315
Query: 171 GFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSS 230
++A + +M+ + PNVVTY++L+ G + K +L M+ +G P+
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 231 NVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGK------INRVKEL 284
N +++ C +G A +LL MV+C P YN L+ C ++ ++
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 285 FVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFE 344
+ M + G + + + C + E+A S+ E+ +G P TY+ + + L
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 345 IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ E A LF EM+ + AD TY +D C
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 41/284 (14%)
Query: 5 HPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSL 64
H P + +++ L+ K K D + ++ P++ Y+ +I+ CK+G+
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 65 GFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
+ + + PNVVT+T++I G +I L ++ + G PN +TY LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKE-----GFVD----- 174
C+ G VA NL +EM + + +T Y +I+G KE G +D
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTH------WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876
Query: 175 -----------------KAKELFLQMKY--------ENLNPNVVTYTSLIHGFCHANDWN 209
KA+ L + ++ L TY SLI C AN
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLM 253
A L EM +GV P + S ++ L +N K+ A LLD +
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 3/235 (1%)
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
+K Y+ ++D + ++ +E Q++ ++ L+ C ++ A
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220
Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
L + D +P+ + N ++ K ++D+AS + M ++R + FT
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280
Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
C K+ + +E +E+ D Y LI+G C+ EEA+ N + P V
Sbjct: 281 C---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
VTY+TL G +Q R ++ M + + + C + Y
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 194 bits (494), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 183/366 (50%), Gaps = 8/366 (2%)
Query: 13 SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
++ IL+ K D + K + +GL DL Y+ LI FC G++ G +F +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 73 LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
L +P +T+ +LI+G C ++ EA+ +F + G PNV TY LI+GLC G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
AL L M + E PN VTY+III+ LCK+G V A E+ MK P+
Sbjct: 334 KEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQG--VQPNVVSSNVIMNELCKNGKMDNASRLL 250
+TY L+ G C D +EA LL M+ P+V+S N +++ LCK ++ A +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
DL+V+ + T N L++ G +N+ EL+ + + +Y +I+G+CK
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
+ A L ++ ++P+V YN L L + ++A +LF EMQ ++ D ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 371 RTFIDG 376
IDG
Sbjct: 568 NIMIDG 573
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 189/371 (50%), Gaps = 10/371 (2%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V + NILL L +N +SL + + L PD+++Y+ +I FC+ ++ +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+ S + ++VT+ LI C ++ EA ++K G E +++ Y +LI G C G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 131 HTIVALNLFKE-MTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
LF E + G+ P +TY+ +I G CK G + +A E+F M +
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
PNV TYT LI G C EA LL M+++ +PN V+ N+I+N+LCK+G + +A +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM--ESMGCKHDDFSYNILINGY 307
++LM + RP+ TYN L+ G C G ++ +L M +S D SYN LI+G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADT 367
CK + +AL +Y+ L K VT N L + + +A++L+ ++ + + ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 368 CTYRTFIDGLC 378
TY IDG C
Sbjct: 495 DTYTAMIDGFC 505
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 8/366 (2%)
Query: 15 NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
N L+ L ++++++ S ++++ F + + S L+ C+ +M + F + +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 75 SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
FA NV L+KGLC +A +L +++ P+V +YNT+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
AL L EM G+G + VT+ I+ID CK G +D+A +MK+ L ++V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMV 254
YTSLI GFC + + K L E++++G P ++ N ++ CK G++ AS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 255 QCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVE 314
+ VRPN +TY L+DG C GK +L M + + +YNI+IN CK+ V
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 315 EALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND--VAADTCTYRT 372
+A+ + + + +P +TYN L GL + A KL M + D +Y
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 373 FIDGLC 378
I GLC
Sbjct: 430 LIHGLC 435
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 8/337 (2%)
Query: 44 PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
P+ TY+I+IN CK G V+ I + + P+ +T+ L+ GLCA+ + EA+ L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 104 -FTKLKAFG-CEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYS 161
+ LK +P+VI+YN LI+GLC+ AL+++ + G + VT +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTN 463
Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
I+++ K G V+KA EL+ Q+ + N TYT++I GFC N AKGLL +M
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
+QP+V N +++ LCK G +D A RL + M + + P+ ++N ++DG G I
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
+ L V M G D F+Y+ LIN + K ++EA+S ++++ G +P +++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ ++ +L ++ D+ D T +D +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%)
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
N V+ + L+ + A G+L M+ +G NV + N+++ LC+N + A LL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
M + + P+ F+YNT++ GFC ++ + EL M+ GC ++ ILI+ +CK
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
+++EA+ E+ F G++ +V Y +L G + + +R LF E+ + TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 371 RTFIDGLCVRPQVR 384
T I G C Q++
Sbjct: 286 NTLIRGFCKLGQLK 299
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 15 NILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILR 74
NILL K + + L+K+++ + + TY+ +I+ FCK G +++ + ++
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 75 SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIV 134
S P+V + L+ LC E + +A LF +++ P+V+++N +I+G + G
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 135 ALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVT 194
A +L M+ P+ TYS +I+ K G++D+A F +M P+
Sbjct: 583 AESLLVGMSRAG------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 195 YTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELC-KNGKMDNASRLL 250
S++ + ++ L+ ++VD+ + + + +M+ +C + MD A RLL
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 188 LNPNVVTYTSLIHGFCHAN--------DWN----EAKGLLIEMVDQGVQPNVVSSNVIMN 235
LNP V Y+ L++ F D N A + + VD G +N +M
Sbjct: 24 LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNN-LMA 80
Query: 236 ELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKH 295
+L ++ + A M++ D N + + L++ + K + M G
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 296 DDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLF 355
+ +++NIL+ G C+N E +A+SL E+ + P V +YNT+ G E ++ E+AL+L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 356 VEMQGNDVAADTCTYRTFIDGLC 378
EM+G+ + T+ ID C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFC 223
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N LL L K D LF+ + FPD+ +++I+I+ K G + +
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ R+ +P++ T++ LI + EA + F K+ G EP+ ++++
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 129 TGHTIVALNLFKEMTNGN 146
G T L K++ + +
Sbjct: 647 QGETDKLTELVKKLVDKD 664
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 183/370 (49%), Gaps = 6/370 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P S +LL L K K + +++F + P + Y I K+ V G +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F R+ P+V + LI GLC R+ +A LF ++ A P++ITYNTLI+G C+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G+ + + + M + E P+ +T++ ++ GL K G V+ A+ + +MK
Sbjct: 262 AGNPEKSFKVRERMKADHIE------PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+ T++ L G+ A G+ VD GV+ N + ++++N LCK GK++ A
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
+L + + PN YNT++DG+C G + + +ME G K D +YN LI +C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ E+E A N++ KG+ P+V TYN L G + ++ + EM+ N +
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 369 TYRTFIDGLC 378
+Y T I+ LC
Sbjct: 496 SYGTLINCLC 505
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 187/371 (50%), Gaps = 6/371 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V +N+L+ L K K + LF + + L P L TY+ LI+ +CK G F +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
R+ P+++TF +L+KGL + +A + ++K G P+ T++ L +G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
AL +++ + GV K N T SI+++ LCKEG ++KA+E+ + + L
Sbjct: 332 NEKAEAALGVYETAVDS----GV--KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PN V Y ++I G+C D A+ + M QG++P+ ++ N ++ C+ G+M+NA +
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
++ M V P+ TYN L+ G+ + ++ ++ ME G + SY LIN C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K ++ EA + ++ +G+ P V YN L G + E A + EM + +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 369 TYRTFIDGLCV 379
TY T IDGL +
Sbjct: 566 TYNTLIDGLSM 576
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 181/354 (51%), Gaps = 15/354 (4%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +F+IL + N+ + L +++ G+ + YT SIL+N CK G++ I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
GR + PN V + ++I G C + +V A ++ G +P+ + YN LI C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 129 TGHTIVALNLFKEMTNGNGEIGVV----FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
G EM N E+ + P+ TY+I+I G ++ DK ++ +M+
Sbjct: 437 LG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
PNVV+Y +LI+ C + EA+ + +M D+GV P V N++++ C GK++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
+A R M++ + N TYNTL+DG +TGK++ ++L + + G K D F+YN LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEM 358
+GY V+ ++LY E+ GIKPT+ TY+ L L E +LF EM
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 10/384 (2%)
Query: 3 HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQV 62
H+ PS + +FN LL L K + ++ K + +G PD +T+SIL + + +
Sbjct: 279 HIEPS---LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 63 SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
++ + S N T + L+ LC E +I +A + + A G PN + YNT+
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 123 INGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQ 182
I+G CR G + A + M KP+ + Y+ +I C+ G ++ A++ +
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQG------MKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 183 MKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK 242
MK + ++P+V TY LI G+ ++++ +L EM D G PNVVS ++N LCK K
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 243 MDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNI 302
+ A + M V P YN L+DG C GKI M G + + +YN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 303 LINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGND 362
LI+G ++ EA L E+ KG+KP V TYN+L G +R + L+ EM+ +
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 363 VAADTCTYRTFIDGLCVRPQVRFT 386
+ TY I LC + + T
Sbjct: 630 IKPTLKTYHLLI-SLCTKEGIELT 652
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 13/361 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++NIL+G + +D + K + G P++ +Y LINC CK ++ ++
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +P V + LI G C++ +I +A ++ G E N++TYNTLI+GL
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
TG A +L E++ KP+ TY+ +I G G V + L+ +MK +
Sbjct: 577 TGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P + TY LI C + L EM ++P+++ N +++ +G M+ A
Sbjct: 631 KPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M++ + + TYN+L+ G GK+ V+ L M + + + +YNI++ G+C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGN---DVAA 365
+ K+ A Y E+ KG V N L GL E +++ A + EM G DV
Sbjct: 747 EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTV 806
Query: 366 D 366
D
Sbjct: 807 D 807
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 162/337 (48%), Gaps = 10/337 (2%)
Query: 41 GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
G+ P + TY+ILI + + + F I + + PNVV++ +LI LC S+++EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 101 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
+ ++ G P V YN LI+G C G A KEM E+ N VTY
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL------NLVTY 567
Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
+ +IDGL G + +A++L L++ + L P+V TY SLI G+ A + L EM
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
G++P + + +++++ LC ++ RL M ++P+ YN ++ + + G + +
Sbjct: 628 SGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
L M D +YN LI G K ++ E SL +E+ + ++P TYN +
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
G E++ A + EMQ D C + GL
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 172 FVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSN 231
+ +A +LF ++ E + P+ + T L+ + + + +++ +P+
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 232 VIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM 291
+ K + L + M + P+ F YN L+DG C ++N ++LF M +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 292 GCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERA 351
+YN LI+GYCK E++ + + I+P+++T+NTL GLF+ E A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 352 LKLFVEMQGNDVAADTCTYRTFIDG 376
+ EM+ D T+ DG
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDG 328
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 209 NEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTL 268
+EA L + ++G+ P+ S ++++ L K + + +++ D RP+ F Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 269 MDGFCLTGKINRVKELFVSMESMGCKHDD-----FSYNILINGYCKNKEVEEALSLYNEL 323
+ + + ELF M KHD F YN+LI+G CK K + +A L++E+
Sbjct: 186 IQAAVKLSDVGKGLELFNRM-----KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
+ + P+++TYNTL G + E++ K+ M+ + + T+ T + GL
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 258 VRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEAL 317
+ P++ + L+D T + +F+++ + F Y I K +V + L
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 318 SLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
L+N + I P+V YN L GL + ++ A +LF EM + TY T IDG
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 378 CV--RPQVRFTYARR 390
C P+ F R
Sbjct: 260 CKAGNPEKSFKVRER 274
Score = 32.0 bits (71), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 282 KELF--VSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
KELF S+ S KHD FSY +L ++K + EA L+ L +GI P+ + L
Sbjct: 93 KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLL 151
Query: 340 HGLFEIRQAERALKLFVEMQGND 362
L + +Q + +F+ + +D
Sbjct: 152 DHLVKTKQFRVTINVFLNILESD 174
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 37/412 (8%)
Query: 1 MRHMHPS--PPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCK 58
M+ M S P + ++N +L K + + L + S G+ D+ TY++LI+ C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 59 MGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVIT 118
+++ G+++ + + PN VT+ +LI G E +++ A+ L ++ +FG PN +T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 119 YNTLINGLCRTGHTIVALNLF-----KEMTNGNGEIGVVF-------------------K 154
+N LI+G G+ AL +F K +T GV+ K
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 155 PNTV-----TYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWN 209
N V TY+ +IDGLCK GF+D+A L +M + ++P++VTY++LI+GFC +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 210 EAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLM 269
AK ++ + G+ PN + + ++ C+ G + A R+ + M+ + FT+N L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 270 DGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIK 329
C GK+ +E M S G + S++ LINGY + E +A S+++E+ G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 330 PTVVTYNTLFHGLFE---IRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
PT TY +L GL + +R+AE+ LK + A DT Y T + +C
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLK---SLHAVPAAVDTVMYNTLLTAMC 624
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 41/411 (9%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V++FNIL+ L ++ L +++ G P + TY+ +++ +CK G+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +V T+ LI LC +RI + L ++ PN +TYNTLING
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G ++A L EM + PN VT++ +IDG EG +A ++F M+ + L
Sbjct: 311 EGKVLIASQLLNEM------LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+ V+Y L+ G C +++ A+G + M GV ++ +++ LCKNG +D A
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSME------------------- 289
LL+ M + + P+ TY+ L++GFC G+ KE+ +
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 290 SMGC----------------KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
MGC D F++N+L+ CK +V EA + GI P V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
+++ L +G + +A +F EM TY + + GLC +R
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V + N +LG + K+ +V S K + + PD+ T++ILIN C G +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++ +S +AP +VT+ +++ C + R A L +K+ G + +V TYN LI+ LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+ L ++M + PN VTY+ +I+G EG V A +L +M L
Sbjct: 276 SNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+PN VT+ +LI G ++ EA + M +G+ P+ VS V+++ LCKN + D A
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
M + V TY ++DG C G ++ L M G D +Y+ LING+C
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 449
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K + A + + G+ P + Y+TL + + + A++++ M D
Sbjct: 450 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 509
Query: 369 TYRTFIDGLCVRPQV 383
T+ + LC +V
Sbjct: 510 TFNVLVTSLCKAGKV 524
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 177/367 (48%), Gaps = 6/367 (1%)
Query: 12 SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
S ++IL+ + L +F+ + G P +YT + ++ K G+ +
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 72 ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
+L+ P+V TF LI LCAE +++ L K++ G P ++TYNT+++ C+ G
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
A+ L M + + TY+++I LC+ + K L M+ ++PN
Sbjct: 244 FKAAIELLDHMKSKG------VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
VTY +LI+GF + A LL EM+ G+ PN V+ N +++ G A ++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
+M + P+ +Y L+DG C + + + ++ M+ G +Y +I+G CKN
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
++EA+ L NE+ GI P +VTY+ L +G ++ + + A ++ + ++ + Y
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 372 TFIDGLC 378
T I C
Sbjct: 478 TLIYNCC 484
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 188/417 (45%), Gaps = 31/417 (7%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V ++N+L+ L ++ L + + + P+ TY+ LIN F G+V + +
Sbjct: 263 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 322
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+L +PN VTF +LI G +E EA +F ++A G P+ ++Y L++GLC+
Sbjct: 323 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 382
Query: 131 HTIVALNLFKEMT--------------------NGNGEIGVVF---------KPNTVTYS 161
+A + M NG + VV P+ VTYS
Sbjct: 383 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442
Query: 162 IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ 221
+I+G CK G AKE+ ++ L+PN + Y++LI+ C EA + M+ +
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Query: 222 GVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRV 281
G + + NV++ LCK GK+ A + M + PN +++ L++G+ +G+ +
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 282 KELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHG 341
+F M +G F+Y L+ G CK + EA L V YNTL
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 342 LFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQ--VRFTYARRKGNSGN 396
+ + +A+ LF EM + D+ TY + I GLC + + + +A+ GN
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)
Query: 68 IFGRIL---RSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLIN 124
+FG ++ R C N + LI+ E I ++ +F + +G P+V T N ++
Sbjct: 108 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 166
Query: 125 GLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMK 184
+ ++G + + KEM P+ T++I+I+ LC EG +K+ L +M+
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRK------ICPDVATFNILINVLCAEGSFEKSSYLMQKME 220
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
P +VTY +++H +C + A LL M +GV +V + N+++++LC++ ++
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
LL M + + PN TYNTL++GF GK+ +L M S G + ++N LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
+G+ +EAL ++ + KG+ P+ V+Y L GL + + + A ++ M+ N V
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 365 ADTCTYRTFIDGLC 378
TY IDGLC
Sbjct: 401 VGRITYTGMIDGLC 414
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 65/432 (15%)
Query: 21 LAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPN 80
L KN D + L ++ G+ PD+ TYS LIN FCK+G+ I RI R +PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 81 VV-----------------------------------TFTSLIKGLCAESRIVEAAALFT 105
+ TF L+ LC ++ EA
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 106 KLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTN------------------GNG 147
+ + G PN ++++ LING +G + A ++F EMT G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592
Query: 148 EI-----------GVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYT 196
+ V +TV Y+ ++ +CK G + KA LF +M ++ P+ TYT
Sbjct: 593 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652
Query: 197 SLIHGFCHANDWNEAKGLLIEMVDQG-VQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
SLI G C A E +G V PN V ++ + K G+ + M
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
P+ T N ++DG+ GKI + +L M + + +YNIL++GY K K+V
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
+ LY + GI P +T ++L G+ E E LK+ V D T+ I
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 832
Query: 376 GLCVRPQVRFTY 387
C ++ + +
Sbjct: 833 KCCANGEINWAF 844
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 7/356 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++ LL L K H K L+++ D Y+ L+ CK G ++ +
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
FG +++ P+ T+TSLI GLC + + V A + +A G PN + Y ++G+
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 128 RTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN 187
+ G + ++M N + P+ VT + +IDG + G ++K +L +M +N
Sbjct: 696 KAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 188 LNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNAS 247
PN+ TY L+HG+ D + + L ++ G+ P+ ++ + ++ +C++ ++
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGY 307
++L + V + +T+N L+ C G+IN +L M S+G D + + +++
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 308 CKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDV 363
+N +E+ + +E+ +GI P Y L +GL + + A + EM + +
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 155/337 (45%), Gaps = 21/337 (6%)
Query: 44 PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
P+L TY+IL++ + K VS F+++ I+ + P+ +T SL+ G+C ES ++E
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 808
Query: 104 FTKLKAF---GCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTY 160
LKAF G E + T+N LI+ C G A +L K MT+ +G+ +T
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTC-- 862
Query: 161 SIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVD 220
++ L + +++ + +M + ++P Y LI+G C D A + EM+
Sbjct: 863 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922
Query: 221 QGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR 280
+ P V+ + ++ L K GK D A+ LL M++ + P ++ TLM C G +
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982
Query: 281 VKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFH 340
EL V M + G K D SYN+LI G C ++ A LY E+ G TY L
Sbjct: 983 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Query: 341 GLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
GL A G D+ R FI +
Sbjct: 1043 GLLARETA---------FSGADIILKDLLARGFITSM 1070
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++SF L+ KN + L L +++ GL DL +Y++LI C G ++L F +
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTK 106
+ + F N T+ +LI+GL A A + K
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 184/373 (49%), Gaps = 41/373 (10%)
Query: 41 GLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEA 100
G P++ Y+ +I +CK+G + +++F + F P + TF ++I G C E V +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 101 AALFTKLKAFG-----------------------------------CEPNVITYNTLING 125
L +++K G C+P+V TYN LIN
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKY 185
LC+ G VA+ E + G++ PN ++Y+ +I CK D A +L LQM
Sbjct: 355 LCKEGKKEVAVGFLDEASKK----GLI--PNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 186 ENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDN 245
P++VTY LIHG + ++A + ++++D+GV P+ N++M+ LCK G+
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 246 ASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILIN 305
A L M+ ++ P+A+ Y TL+DGF +G + +++F G K D +N +I
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
G+C++ ++EAL+ N + + + P TY+T+ G + + A+K+F M+ N
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 366 DTCTYRTFIDGLC 378
+ TY + I+G C
Sbjct: 589 NVVTYTSLINGFC 601
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 180/356 (50%), Gaps = 7/356 (1%)
Query: 44 PDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAAL 103
PD+ TY+ILIN CK G+ + + PN +++ LI+ C A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 104 FTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSII 163
++ GC+P+++TY LI+GL +GH A+N+ ++ + GV P+ Y+++
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR----GV--SPDAAIYNML 456
Query: 164 IDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGV 223
+ GLCK G AK LF +M N+ P+ Y +LI GF + D++EA+ + V++GV
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 224 QPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKE 283
+ +VV N ++ C++G +D A ++ M + + P+ FTY+T++DG+ + +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 284 LFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLF 343
+F ME CK + +Y LING+C + + A + E+ + + P VVTY TL L
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 344 -EIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTYARRKGNSGNTN 398
E E+A+ + M N + T+ + G + + N G ++
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 21/349 (6%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++ IL+ L + H D +++ +L G+ PD Y++L++ CK G+ ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F +L P+ + +LI G EA +F+ G + +V+ +N +I G CR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G AL M + P+ TYS IIDG K+ + A ++F M+
Sbjct: 533 SGMLDEALACMNRMNEEH------LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGK-MDNAS 247
PNVVTYTSLI+GFC D+ A+ EM + + PNVV+ ++ L K ++ A
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 248 RLLDLMVQCDVRPNAFTYNTLMDGFC--LTGKI------------NRVKELFVSMESMGC 293
+LM+ PN T+N L+ GF +GK+ + E F M+S G
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGL 342
+YN + C + V+ A +++ KG P V++ + HG
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 22/356 (6%)
Query: 27 YDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTS 86
YD V+ L+ + PD+ + L++ K ++ ++ + + + +
Sbjct: 157 YDYVVELYDSV------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210
Query: 87 LIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGN 146
L+KG+C E ++ L GC PN++ YNT+I G C+ G A +FKE+
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 147 GEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLI-----HG 201
F P T+ +I+G CKEG + L ++K L +V ++I HG
Sbjct: 271 ------FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
Query: 202 FCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPN 261
+ D E+ G +I +P+V + N+++N LCK GK + A LD + + PN
Sbjct: 325 Y--KVDPAESIGWIIA---NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 262 AFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYN 321
+Y L+ +C + + + +L + M GCK D +Y ILI+G + +++A+++
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 322 ELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGL 377
+L +G+ P YN L GL + + A LF EM ++ D Y T IDG
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 126/318 (39%), Gaps = 56/318 (17%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + +N+L+ L K + LF + + PD Y Y+ LI+ F + G +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F + +VV ++IKG C + EA A ++ P+ TY+T+I+G +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
A+ +F+ M KPN VTY+ +I+G C +G A+E F +M+ +L
Sbjct: 568 QQDMATAIKIFRYMEKNKC------KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIE-MVDQGVQPNVVSSNVIMNE----------- 236
PNVVTYT+LI + E E M+ PN V+ N ++
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681
Query: 237 --------------------------------------LCKNGKMDNASRLLDLMVQCDV 258
LC +G + A D MV+
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741
Query: 259 RPNAFTYNTLMDGFCLTG 276
P+ ++ ++ GFC+ G
Sbjct: 742 SPDPVSFAAILHGFCVVG 759
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
P+VI N+L++ L ++ A ++ EM + + + + I++ G+C EG V
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSV------DNYSTCILVKGMCNEGKV 221
Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
+ ++L + PN+V Y ++I G+C D A + E+ +G P + + +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
+N CK G + RLL + + +R + + N ++D G E + + C
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
K D +YNILIN CK + E A+ +E KG+ P ++Y L + ++ + A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCV 379
L ++M D TY I GL V
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVV 427
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 15/259 (5%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P +++ ++ K + T + +F+ + P++ TY+ LIN FC G +
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNTLINGLC 127
F + PNVVT+T+LI+ L ES +E A + +L C PN +T+N L+ G
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672
Query: 128 -RTGHTIVA---------LNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAK 177
+T ++A +LF E + G + + Y+ + LC G V A
Sbjct: 673 KKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG--WSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 178 ELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGL-LIEMVDQGVQPNVVSSNVIMNE 236
+M + +P+ V++ +++HGFC + + + + + ++G++ V S V+
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQH 790
Query: 237 LCKNGKMDNASRLLDLMVQ 255
L + AS +L MV+
Sbjct: 791 L-PQPVICEASTILHAMVE 808
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 167 LCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQ-- 224
L + ++ +++ ++ EN+ + ++H + + ++A +E+ D V+
Sbjct: 109 LARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKA----VEIYDYVVELY 164
Query: 225 ---PNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNT--LMDGFCLTGKIN 279
P+V++ N +++ L K+ ++ +A ++ D M CD + Y+T L+ G C GK+
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEM--CDRGDSVDNYSTCILVKGMCNEGKVE 222
Query: 280 RVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLF 339
++L GC + YN +I GYCK ++E A ++ EL KG PT+ T+ T+
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 340 HGL 342
+G
Sbjct: 283 NGF 285
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 208 WNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQC-DVRPNAFTYN 266
+NE + +L + ++ V+ + + +++ ++G + A + D +V+ D P+ N
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 267 TLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFK 326
+L+ + ++ ++++ M G D++S IL+ G C +VE L K
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 327 GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
G P +V YNT+ G ++ E A +F E++ T+ T I+G C
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + ++N L+ + + L + G P +YTY+ +IN CK G+ +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F +LRS +P+ T+ SL+ C + +VE +F+ +++ P+++ ++++++ R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
+G+ AL F N E G++ P+ V Y+I+I G C++G + A L +M +
Sbjct: 388 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+VVTY +++HG C EA L EM ++ + P+ + ++++ CK G + NA
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L M + +R + TYNTL+DGF G I+ KE++ M S SY+IL+N C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
+ EA +++E+ K IKPTV+ N++ G A +M D
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 369 TYRTFIDGL 377
+Y T I G
Sbjct: 622 SYNTLIYGF 630
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 189/373 (50%), Gaps = 9/373 (2%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
SP + ++L+ K +T +F + S + PDL +S +++ F + G +
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGL 126
+ F + + P+ V +T LI+G C + I A L ++ GC +V+TYNT+++GL
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 127 CRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE 186
C+ A LF EMT P++ T +I+IDG CK G + A ELF +MK +
Sbjct: 456 CKRKMLGEADKLFNEMTER------ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 187 NLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNA 246
+ +VVTY +L+ GF D + AK + +MV + + P +S ++++N LC G + A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 247 SRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILING 306
R+ D M+ +++P N+++ G+C +G + + M S G D SYN LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 307 YCKNKEVEEALSLYNELPFK--GIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
+ + + + +A L ++ + G+ P V TYN++ HG Q + A + +M V
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 365 ADTCTYRTFIDGL 377
D TY I+G
Sbjct: 690 PDRSTYTCMINGF 702
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)
Query: 12 SSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGR 71
S F++L+ + + F L S G + + LI ++G V L + ++
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 72 ILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 131
I RS NV T ++ LC + ++ + ++++ G P+++TYNTLI+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 132 TIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPN 191
A L M G G F P TY+ +I+GLCK G ++AKE+F +M L+P+
Sbjct: 286 MEEAFELMNAMP-GKG-----FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 192 VVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLD 251
TY SL+ C D E + + +M + V P++V + +M+ ++G +D A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 252 LMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNK 311
+ + + P+ Y L+ G+C G I+ L M GC D +YN +++G CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 312 EVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYR 371
+ EA L+NE+ + + P T L G ++ + A++LF +M+ + D TY
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 372 TFIDGL 377
T +DG
Sbjct: 520 TLLDGF 525
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 6/368 (1%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V + NI++ L K+ + V + ++ G++PD+ TY+ LI+ + G + F +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
+ F+P V T+ ++I GLC + A +F ++ G P+ TY +L+ C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
+ +F +M + + VV P+ V +S ++ + G +DKA F +K L P
Sbjct: 355 DVVETEKVFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
+ V YT LI G+C + A L EM+ QG +VV+ N I++ LCK + A +L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
+ M + + P+++T L+DG C G + ELF M+ + D +YN L++G+ K
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
+++ A ++ ++ K I PT ++Y+ L + L A +++ EM ++
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 371 RTFIDGLC 378
+ I G C
Sbjct: 589 NSMIKGYC 596
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 8/360 (2%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + F+ ++ ++ + D L F + GL PD Y+ILI +C+ G +S+ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+L+ A +VVT+ +++ GLC + EA LF ++ P+ T LI+G C+
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G+ A+ LF++M + + VTY+ ++DG K G +D AKE++ M + +
Sbjct: 493 LGNLQNAMELFQKMKEKR------IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P ++Y+ L++ C EA + EM+ + ++P V+ N ++ C++G +
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESM--GCKHDDFSYNILING 306
L+ M+ P+ +YNTL+ GF +++ L ME G D F+YN +++G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 307 YCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAAD 366
+C+ +++EA + ++ +G+ P TY + +G A ++ EM + D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 186/370 (50%), Gaps = 6/370 (1%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
+ + N L+G L + + +++ ++ G+ ++YT +I++N CK G++
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
++ P++VT+ +LI ++ + EA L + G P V TYNT+INGLC+ G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
A +F EM P++ TY ++ CK+G V + +++F M+ ++ P
Sbjct: 320 KYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLL 250
++V ++S++ F + + ++A + + G+ P+ V +++ C+ G + A L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 251 DLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKN 310
+ M+Q + TYNT++ G C + +LF M D ++ ILI+G+CK
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 311 KEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTY 370
++ A+ L+ ++ K I+ VVTYNTL G ++ + A +++ +M ++ +Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 371 RTFIDGLCVR 380
++ LC +
Sbjct: 554 SILVNALCSK 563
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 49 YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
+ +LI + + ++ F + F ++ +LI L + A ++ ++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
G NV T N ++N LC+ G ++ E GV P+ VTY+ +I
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ----EKGVY--PDIVTYNTLISAYS 281
Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
+G +++A EL M + +P V TY ++I+G C + AK + EM+ G+ P+
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
+ ++ E CK G + ++ M DV P+ ++++M F +G +++ F S+
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
+ G D+ Y ILI GYC+ + A++L NE+ +G VVTYNT+ HGL + +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
A KLF EM + D+ T IDG C
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHC 491
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
V ++N +L L K K LF + LFPD YT +ILI+ CK+G + +F
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 71 RILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 130
++ +VVT+ +L+ G I A ++ + + P I+Y+ L+N LC G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 131 HTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNP 190
H A ++ EM + N KP + + +I G C+ G + +M E P
Sbjct: 565 HLAEAFRVWDEMISKN------IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 191 NVVTYTSLIHGFCHANDWNEAKGLLIEMVDQ--GVQPNVVSSNVIMNELCKNGKMDNASR 248
+ ++Y +LI+GF + ++A GL+ +M ++ G+ P+V + N I++ C+ +M A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDD 297
+L M++ V P+ TY +++GF + + M G DD
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 17/248 (6%)
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQM-----------------KYENLNPNVVTY 195
FK +++ S +I L + G + A+ L+M + N N +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
LI + A EA + +G ++ + N ++ L + G ++ A + + +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
V N +T N +++ C GK+ +V ++ G D +YN LI+ Y +EE
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
A L N +P KG P V TYNT+ +GL + + ERA ++F EM + ++ D+ TYR+ +
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 376 GLCVRPQV 383
C + V
Sbjct: 349 EACKKGDV 356
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 198/403 (49%), Gaps = 41/403 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P ++ +L+ L D +LF + G P+++TY++LI+ C+ G++ +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
++++ P+V+T+ +LI G C + R+V A L T ++ C+PNV T+N L+ GLCR
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G A++L K M + NG P+ V+Y+++IDGLC+EG ++ A +L M ++
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
P+ +T+T++I+ FC + A L M+ +G+ + V+ +++ +CK GK +A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 249 LLDLMVQ--------------------CDVR---------------PNAFTYNTLMDGFC 273
+L+ +V+ C V+ P+ TY TL+DG
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
+G I + M+ GC + + Y I+ING C+ VEEA L + + G+ P V
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
TY + G + +RAL+ M + Y + + G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 7/352 (1%)
Query: 34 FKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCA 93
++R+ + G + Y ++N CK G + +IL+ F + TSL+ G C
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 94 ESRIVEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVV 152
+ +A +F + K C PN ++Y+ LI+GLC G A L +M GE G
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM----GEKGC- 297
Query: 153 FKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAK 212
+P+T TY+++I LC G +DKA LF +M PNV TYT LI G C EA
Sbjct: 298 -QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 213 GLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGF 272
G+ +MV + P+V++ N ++N CK+G++ A LL +M + +PN T+N LM+G
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 273 CLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTV 332
C GK + L M G D SYN+LI+G C+ + A L + + I+P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 333 VTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQVR 384
+T+ + + + +A+ A M ++ D T T IDG+C + R
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 181/373 (48%), Gaps = 12/373 (3%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P S++IL+ L + + L ++ G P TY++LI C G + F +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
F ++ PNV T+T LI GLC + +I EA + K+ P+VITYN LING C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
G + A L M KPN T++ +++GLC+ G KA L +M L
Sbjct: 384 DGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
+P++V+Y LI G C N A LL M ++P+ ++ I+N CK GK D AS
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINR---VKELFVSMESMGCKHDDFSYNILIN 305
L LM++ + + T TL+DG C GK + E V M + H S N++++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH---SLNVILD 554
Query: 306 GYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAA 365
K +V+E L++ ++ G+ P+VVTY TL GL + ++ M+ +
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 366 DTCTYRTFIDGLC 378
+ Y I+GLC
Sbjct: 615 NVYPYTIIINGLC 627
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 171/340 (50%), Gaps = 7/340 (2%)
Query: 14 FNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRIL 73
+ ++ L KN + + ++ IG D + + L+ FC+ + +F +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 74 RSCF-APNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
+ APN V+++ LI GLC R+ EA L ++ GC+P+ TY LI LC G
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 133 IVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNV 192
A NLF EM I KPN TY+++IDGLC++G +++A + +M + + P+V
Sbjct: 318 DKAFNLFDEM------IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 193 VTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDL 252
+TY +LI+G+C A LL M + +PNV + N +M LC+ GK A LL
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 253 MVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKE 312
M+ + P+ +YN L+DG C G +N +L SM + D ++ +IN +CK +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 313 VEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERAL 352
+ A + + KGI VT TL G+ ++ + AL
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 5/330 (1%)
Query: 49 YSILINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLK 108
YS L+ K+ L +V + R+ F ++ + +++ LC A +K+
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 109 AFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLC 168
G + +L+ G CR + AL +F M+ V PN+V+YSI+I GLC
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE-----VTCAPNSVSYSILIHGLC 277
Query: 169 KEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVV 228
+ G +++A L QM + P+ TYT LI C ++A L EM+ +G +PNV
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 229 SSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSM 288
+ V+++ LC++GK++ A+ + MV+ + P+ TYN L++G+C G++ EL M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 289 ESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQA 348
E CK + ++N L+ G C+ + +A+ L + G+ P +V+YN L GL
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 349 ERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
A KL M D+ D T+ I+ C
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 7/312 (2%)
Query: 77 FAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVAL 136
F N ++SL+ L A + +++A G +I Y T++N LC+ G+T A
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215
Query: 137 NLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYE-NLNPNVVTY 195
++ +IG V + T ++ G C+ + A ++F M E PN V+Y
Sbjct: 216 MFMSKIL----KIGFVLDSHIGTSLLL--GFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 196 TSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQ 255
+ LIHG C EA GL +M ++G QP+ + V++ LC G +D A L D M+
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 256 CDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEE 315
+PN TY L+DG C GKI + M +YN LINGYCK+ V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 316 ALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFID 375
A L + + KP V T+N L GL + + +A+ L M N ++ D +Y ID
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 376 GLCVRPQVRFTY 387
GLC + Y
Sbjct: 450 GLCREGHMNTAY 461
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 64/363 (17%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ +L+ L ++ + + +++ +FP + TY+ LIN +CK G+V F +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ + PNV TF L++GLC + +A L ++ G P++++YN LI+GLCR
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 129 TGHTIVALNLFKEM--------------------TNGNGEIGVVF---------KPNTVT 159
GH A L M G ++ F + VT
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 160 YSIIIDGLCKEGFVDKA---------------------------------KELFLQMKYE 186
+ +IDG+CK G A +EL + K
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 187 NLN--PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
L P+VVTYT+L+ G + D + +L M G PNV +I+N LC+ G+++
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
A +LL M V PN TY ++ G+ GK++R E +M G + +D Y+ L+
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Query: 305 NGY 307
G+
Sbjct: 694 QGF 696
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 58/421 (13%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P + S+N+L+ L + H +T L +N + PD T++ +IN FCK G+ +
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
G +LR + + VT T+LI G+C + +A + L + N +++ L +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 129 TGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENL 188
L + ++ ++G+V P+ VTY+ ++DGL + G + + + MK
Sbjct: 559 GCKVKEELAMLGKIN----KLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 189 NPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASR 248
PNV YT +I+G C EA+ LL M D GV PN V+ V++ NGK+D A
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGK-INRVKELFVS------------------ME 289
+ MV+ N Y++L+ GF L+ K I+ +E VS +E
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 290 SMG--------------CKH------DDFSYNILING-------------YCKNKEVEEA 316
+G CK +D N+L G YC K+ +
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKC 792
Query: 317 LSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDG 376
+ L + G P+ ++ + GL + AERA +L +E+ ++ + T+++
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852
Query: 377 L 377
L
Sbjct: 853 L 853
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 58/313 (18%)
Query: 13 SFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFGRI 72
S N++L L+K L++ ++N +GL P + TY+ L++ + G ++ F I +
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 73 LRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 132
S PNV +T +I GLC R+ EA L + ++ G PN +TY ++ G G
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 133 IVALNLFKEMTNGNGEI----------GVVFKPNTVTYS--------------------- 161
AL + M E+ G V + S
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 162 ----------------IIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSL---IHGF 202
++ LCKEG D++ +L + L V ++ + +
Sbjct: 728 ISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNV----LERGVFLEKAMDIIMESY 783
Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL-LDLMVQCDV--R 259
C + L+ ++ G P+ S +++ L K G + A L ++L+ V +
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEK 843
Query: 260 PNAFTY-NTLMDG 271
TY LM+G
Sbjct: 844 SGVLTYVECLMEG 856
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 101/264 (38%), Gaps = 57/264 (21%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V + I++ L + + L + G+ P+ TY++++ + G++
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 69 FGRILRSCFAPNVVTFTSLIKGLC---------AESRIVEAAALFTKLKAF--------- 110
++ + N ++SL++G ES + + A T +
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQ 733
Query: 111 --GCEPNVITYNTLINGLCRTGHTIVALNLF------------------------KEMTN 144
GC + + L+ LC+ G T + +L K+ T
Sbjct: 734 LGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTK 791
Query: 145 GNGEIGVVFK----PNTVTYSIIIDGLCKEGFVDKAKELFLQMKYEN---LNPNVVTYTS 197
I +V K P+ ++ ++I GL KEG ++A+EL +++ N V+TY
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVE 851
Query: 198 LIHGFCHANDWNEAKGLLIEMVDQ 221
+ D +E +I++VDQ
Sbjct: 852 CLMEGDETGDCSE----VIDLVDQ 871
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 196/373 (52%), Gaps = 12/373 (3%)
Query: 11 VSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVIFG 70
SSF++ + A+ + TV SL R+ S+ + P T++I+ + G+ +F
Sbjct: 91 ASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 71 RILR-SCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRT 129
+ CF ++ +F +++ LC R+ +A LF L+ + +TYN ++NG C
Sbjct: 151 NMHEHGCFQ-DLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGWCLI 208
Query: 130 GHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLN 189
T AL + KEM E G+ PN TY+ ++ G + G + A E FL+MK +
Sbjct: 209 KRTPKALEVLKEMV----ERGI--NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 190 PNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRL 249
+VVTYT+++HGF A + A+ + EM+ +GV P+V + N ++ LCK ++NA +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 250 LDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCK 309
+ MV+ PN TYN L+ G G+ +R +EL ME+ GC+ + +YN++I Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 310 NKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAER---ALKLFVEMQGNDVAAD 366
EVE+AL L+ ++ P + TYN L G+F +++E A KL +EM
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442
Query: 367 TCTYRTFIDGLCV 379
T+ ++GL +
Sbjct: 443 KFTFNRVLNGLLL 455
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 11/346 (3%)
Query: 1 MRHMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMG 60
MR + P P +F I+ A D + LF ++ G F DL +++ +++ CK
Sbjct: 117 MRSLRIGPSP-KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
+V + +F R LR F+ + VT+ ++ G C R +A + ++ G PN+ TYN
Sbjct: 176 RVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
T++ G R G A F EM + EI V VTY+ ++ G G + +A+ +F
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV------VTYTTVVHGFGVAGEIKRARNVF 288
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
+M E + P+V TY ++I C ++ A + EMV +G +PNV + NV++ L
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
G+ L+ M PN TYN ++ + ++ + LF M S C + +Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 301 NILINGYCKNKEVEE---ALSLYNELPFKGIKPTVVTYNTLFHGLF 343
NILI+G K E+ A L E+ +G P T+N + +GL
Sbjct: 409 NILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLL 454
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 47/331 (14%)
Query: 3 HMHPSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFP-DLYTYSILINCFCKMGQ 61
H H ++SFN +L L K+K + LF+ L G F D TY++++N +C + +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKR 210
Query: 62 VSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNT 121
+ ++ PN+ T+ +++KG +I A F ++K CE +V+TY T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 122 LINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELFL 181
+++G G A N+F EM GV+ P+ TY+ +I LCK+ V+ A +F
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIRE----GVL--PSVATYNAMIQVLCKKDNVENAVVMFE 324
Query: 182 QMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNG 241
+M PNV TY LI G HA +++ + L+ M ++G +PN + N+++ +
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384
Query: 242 KMDNA--------------------------------------SRLLDLMVQCDVRPNAF 263
+++ A +LL MV+ P F
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKF 444
Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCK 294
T+N +++G LTG KE+ G +
Sbjct: 445 TFNRVLNGLLLTGNQAFAKEILRLQSKSGSR 475
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 204 HANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAF 263
H W+ L+ M + P+ + ++ GK D A +L M + +
Sbjct: 107 HPTVWS----LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLA 162
Query: 264 TYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNEL 323
++NT++D C + ++ + ELF ++ D +YN+++NG+C K +AL + E+
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEM 221
Query: 324 PFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+GI P + TYNT+ G F Q A + F+EM+ D D TY T + G V ++
Sbjct: 222 VERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281
Query: 384 R 384
+
Sbjct: 282 K 282
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 114 PNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFV 173
PN++ N+++ L H AL F + N + E + + ++ + ID +
Sbjct: 56 PNLV--NSVLKRLW--NHGPKALQFFHFLDNHHRE----YVHDASSFDLAIDIAARLHLH 107
Query: 174 DKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVI 233
L +M+ + P+ T+ + + A ++A L + M + G ++ S N I
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 234 MNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGC 293
++ LCK+ +++ A L + + + TYN +++G+CL + + E+ M G
Sbjct: 168 LDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 294 KHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALK 353
+ +YN ++ G+ + ++ A + E+ + + VVTY T+ HG + +RA
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 354 LFVEMQGNDVAADTCTYRTFIDGLCVRPQV 383
+F EM V TY I LC + V
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 249 LLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYC 308
L+ M + P+ T+ + + + GK ++ +LF++M GC D S+N +++ C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 309 KNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTC 368
K+K VE+A L+ L + VTYN + +G I++ +AL++ EM + +
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 369 TYRTFIDGLCVRPQVRFTY 387
TY T + G Q+R +
Sbjct: 232 TYNTMLKGFFRAGQIRHAW 250
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 295 HDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKL 354
HD S+++ I+ + SL + + I P+ T+ + + ++A+KL
Sbjct: 89 HDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKL 148
Query: 355 FVEMQGNDVAADTCTYRTFIDGLCVRPQVRFTY 387
F+ M + D ++ T +D LC +V Y
Sbjct: 149 FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 196/405 (48%), Gaps = 41/405 (10%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF-- 66
P V +F L+ K D LFK + G+ PDL YS LI+ + K G + +G
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 67 ---------------------------------VIFGRILRSCFAPNVVTFTSLIKGLCA 93
V++ R+L +PNVVT+T LIKGLC
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 94 ESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF 153
+ RI EA ++ ++ G EP+++TY++LI+G C+ G+ L+++M I + +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGY 457
Query: 154 KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGFCHANDWNEAKG 213
P+ V Y +++DGL K+G + A ++M +++ NVV + SLI G+C N ++EA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 214 LLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFC 273
+ M G++P+V + +M G+++ A L M + + P+A Y TL+D FC
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 274 LTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNELPFKGIKPTVV 333
K +LF M+ D N++I+ K +E+A +N L ++P +V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 334 TYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
TYNT+ G +R+ + A ++F ++ +T T I LC
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 186/429 (43%), Gaps = 64/429 (14%)
Query: 9 PPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGFVI 68
P V ++ IL+ L ++ ++ ++ G+ P + TYS LI+ FCK G + GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 69 FGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLINGLCR 128
+ +++ + P+VV + L+ GL + ++ A K+ NV+ +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 129 TGHTIVALNLFKEM--------------------TNGNGEIGV-----VFK----PNTVT 159
AL +F+ M G E + +FK P+ +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 160 YSIIIDGLCKE-----GF------------------------------VDKAKELFLQMK 184
Y +ID CK G ++ A + F +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
+ P++VTY ++I G+C +EA+ + + PN V+ ++++ LCKN MD
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
A R+ +M + +PNA TY LMD F + I +LF M+ G SY+I+I
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
+G CK V+EA +++++ + P VV Y L G ++ + A L+ M N V
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 365 ADTCTYRTF 373
D R
Sbjct: 809 PDDLLQRAL 817
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 6/318 (1%)
Query: 61 QVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYN 120
Q+ + + +L APNVVTF +LI G C + A LF ++ G EP++I Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 121 TLINGLCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVTYSIIIDGLCKEGFVDKAKELF 180
TLI+G + G + LF + + K + V +S ID K G + A ++
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKG------VKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 181 LQMKYENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKN 240
+M + ++PNVVTYT LI G C EA G+ +++ +G++P++V+ + +++ CK
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 241 GKMDNASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSY 300
G + + L + M++ P+ Y L+DG G + V M + + +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 301 NILINGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQG 360
N LI+G+C+ +EAL ++ + GIKP V T+ T+ + E AL LF M
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 361 NDVAADTCTYRTFIDGLC 378
+ D Y T ID C
Sbjct: 560 MGLEPDALAYCTLIDAFC 577
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 29/356 (8%)
Query: 52 LINCFCKMGQVSLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG 111
L+ C C+ G V IF + + ++ L R+ A F KL G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 112 CEPN-VITYNTLINGLCRTGHTIVALNLFKEMTNGNGEIGVVF----------------- 153
EP+ V + +++ L G AL+ + + +G+V
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 154 -----------KPNTVTYSIIIDGLCKEGFVDKAKELFLQMKYENLNPNVVTYTSLIHGF 202
PN VT+ +I+G CK G +D+A +LF M+ + P+++ Y++LI G+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 203 CHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMDNASRLLDLMVQCDVRPNA 262
A L + + +GV+ +VV + ++ K+G + AS + M+ + PN
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 263 FTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILINGYCKNKEVEEALSLYNE 322
TY L+ G C G+I ++ + G + +Y+ LI+G+CK + +LY +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 323 LPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVAADTCTYRTFIDGLC 378
+ G P VV Y L GL + A++ V+M G + + + + IDG C
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 10/324 (3%)
Query: 66 FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
F + G I +V F L++ C + +A +F G + ++N
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190
Query: 126 LCRTGHTIVALNLFKEMTNGNGEIGVVFKPNTVT-YSIIIDGLCKEGFVDKAKELFLQMK 184
L + + + F ++ G E P+ V+ + ++D L +G V KA + +
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244
Query: 185 YENLNPNVVTYTSLIHGFCHANDWNEAKGLLIEMVDQGVQPNVVSSNVIMNELCKNGKMD 244
+V+ ++ G + A LL ++D G PNVV+ ++N CK G+MD
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 245 NASRLLDLMVQCDVRPNAFTYNTLMDGFCLTGKINRVKELFVSMESMGCKHDDFSYNILI 304
A L +M Q + P+ Y+TL+DG+ G + +LF G K D ++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 305 NGYCKNKEVEEALSLYNELPFKGIKPTVVTYNTLFHGLFEIRQAERALKLFVEMQGNDVA 364
+ Y K+ ++ A +Y + +GI P VVTY L GL + + A ++ ++ +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 365 ADTCTYRTFIDGLCVRPQVRFTYA 388
TY + IDG C +R +A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFA 447
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 6 PSPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLG 65
P P + IL+ L KN D + +F + G P+ TY L++ F K +
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 66 FVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTLING 125
F +F + +P++V+++ +I GLC R+ EA +F + P+V+ Y LI G
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 126 LCRTGHTIVALNLFKEM 142
C+ G + A L++ M
Sbjct: 786 YCKVGRLVEAALLYEHM 802
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 7 SPPPVSSFNILLGCLAKNKHYDTVLSLFKRLNSIGLFPDLYTYSILINCFCKMGQVSLGF 66
S P ++ L+ +K+ + LF+ + G+ P + +YSI+I+ CK G+V
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 67 VIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFGCEPNVITYNTL 122
IF + + + P+VV + LI+G C R+VEAA L+ + G +P+ + L
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,494,546
Number of Sequences: 539616
Number of extensions: 5870740
Number of successful extensions: 29001
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 17314
Number of HSP's gapped (non-prelim): 3355
length of query: 400
length of database: 191,569,459
effective HSP length: 120
effective length of query: 280
effective length of database: 126,815,539
effective search space: 35508350920
effective search space used: 35508350920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)