Query 015823
Match_columns 399
No_of_seqs 306 out of 1965
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 01:13:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015823.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015823hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 1.1E-64 2.3E-69 483.7 24.2 302 32-335 49-389 (390)
2 KOG0698 Serine/threonine prote 100.0 9.3E-47 2E-51 367.8 27.4 253 53-362 46-308 (330)
3 PLN03145 Protein phosphatase 2 100.0 2.2E-46 4.8E-51 367.3 27.1 255 51-360 69-332 (365)
4 KOG0697 Protein phosphatase 1B 100.0 1.1E-45 2.4E-50 334.1 23.3 260 46-359 20-292 (379)
5 PTZ00224 protein phosphatase 2 100.0 1.5E-43 3.3E-48 348.4 27.5 242 50-360 25-273 (381)
6 PF00481 PP2C: Protein phospha 100.0 6.7E-44 1.4E-48 336.7 17.5 236 54-325 7-250 (254)
7 COG0631 PTC1 Serine/threonine 100.0 1.2E-40 2.6E-45 314.9 20.0 231 57-361 19-255 (262)
8 KOG0699 Serine/threonine prote 100.0 6.6E-39 1.4E-43 299.3 18.7 173 148-360 328-505 (542)
9 PRK14559 putative protein seri 100.0 9.2E-36 2E-40 308.6 24.2 243 53-360 381-637 (645)
10 cd00143 PP2Cc Serine/threonine 100.0 1.4E-34 3E-39 271.5 25.1 238 54-357 8-254 (254)
11 smart00332 PP2Cc Serine/threon 100.0 9.7E-34 2.1E-38 266.4 24.8 234 55-355 14-255 (255)
12 KOG1323 Serine/threonine phosp 100.0 4.5E-29 9.7E-34 231.4 20.2 252 75-360 138-489 (493)
13 KOG1379 Serine/threonine prote 99.9 3.6E-23 7.8E-28 192.5 18.3 221 60-357 90-330 (330)
14 KOG0618 Serine/threonine phosp 99.8 4E-19 8.7E-24 184.8 17.1 216 81-362 551-776 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 5.9E-18 1.3E-22 155.1 14.1 185 54-307 5-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 6.9E-16 1.5E-20 139.3 17.7 145 81-308 30-176 (193)
17 TIGR02865 spore_II_E stage II 99.5 1.2E-12 2.7E-17 140.5 19.2 190 58-357 564-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 1.8E-10 4E-15 103.6 21.2 179 80-358 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.0 0.00048 1E-08 68.6 18.2 180 80-358 174-366 (367)
20 PF09436 DUF2016: Domain of un 46.7 12 0.00025 28.1 1.3 22 279-301 26-47 (72)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-64 Score=483.69 Aligned_cols=302 Identities=53% Similarity=0.862 Sum_probs=280.1
Q ss_pred CCCCeeeecCCCCcccceeeeeeecCCCCCcchhhhccCccccCCC-CCceEEEEEecCCCchHHHHHHHHHHHHHHHH-
Q 015823 32 RQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEF-GPYGTFVGVYDGHGGPETSRYINDHLFQHLKR- 109 (399)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~-~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~- 109 (399)
..++++|+++...+..|++++++.+.++.++|...++.++...... .+.++|+||||||||++|++|++++|+.++..
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 6688999999999999999999999998889998888777766555 67789999999999999999999999999872
Q ss_pred -----------hhhc--------------------c-CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEE
Q 015823 110 -----------FTSD--------------------Q-QSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVG 157 (399)
Q Consensus 110 -----------~~~~--------------------~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~ 157 (399)
+..+ . .....++|.+||.+++++|...+.+.+...|+.+.+||||+|+
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 2222 1 3557789999999999999999999999999999999999999
Q ss_pred EEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCccccccccc
Q 015823 158 VICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIG 237 (399)
Q Consensus 158 ~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalG 237 (399)
++.+..|||||+|||||+|++....++.+.++|||.||+.+++.|+.||+..||+++.+++.++ |||+|.|++|||||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAfG 286 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAFG 286 (390)
T ss_pred EEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeecc
Confidence 9999999999999999999987544444799999999999999999999999999999999988 99999999999999
Q ss_pred cccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHc-----CCCchH
Q 015823 238 DVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQN-----HPQSGS 312 (399)
Q Consensus 238 d~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~-----~~~~~~ 312 (399)
|.+||+..++.+|++.+|+++.++++||++++|+|+.++|.|.|+|||||||||||+|++||++++|.. .+++++
T Consensus 287 d~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~ 366 (390)
T KOG0700|consen 287 DGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNP 366 (390)
T ss_pred ceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 788999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhh
Q 015823 313 ARRLVKAALQEAAKKREMRYSDL 335 (399)
Q Consensus 313 a~~Lv~~al~~~a~~~~~~~~~l 335 (399)
|+.||+.|+.+++++++|++++|
T Consensus 367 A~hLIr~aL~~aakk~~~r~s~l 389 (390)
T KOG0700|consen 367 ATHLIRHALGRAAKKRGMRLSDL 389 (390)
T ss_pred HHHHHHHHHhhhhhhccccHhhc
Confidence 99999999999999999999876
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-47 Score=367.85 Aligned_cols=253 Identities=36% Similarity=0.537 Sum_probs=204.6
Q ss_pred eeecCCCCCcchhhhccCccccCCCCC-ceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCC--chHHHHHHHHH-H
Q 015823 53 AVVQANNLLEDQSQVESGSLSTHEFGP-YGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS--MSADVIRKAYQ-A 128 (399)
Q Consensus 53 ~~~~~~~~~ED~~~v~~~~~~~~~~~~-~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~--~~~~~l~~a~~-~ 128 (399)
+..+.+..|||.+.............. ...||||||||||+.+|+|+.++|+..+.+....... ....+++++|. .
T Consensus 46 ~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F~~~ 125 (330)
T KOG0698|consen 46 SIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAFLTK 125 (330)
T ss_pred ecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHH
Confidence 444557789999877544332222333 4799999999999999999999999999886655443 37889999999 5
Q ss_pred HHHHHHHHhhhcCCCCCCcccccceEEEEEEeCC-EEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHH
Q 015823 129 TEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGG-TLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQ 207 (399)
Q Consensus 129 ~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~-~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~ 207 (399)
++..+... ..+...+|||++++++.++ +|||||+|||||||+++ .+.+++||.||+|..+.|+.||.
T Consensus 126 ~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~-----~~~a~~Ls~DHkP~~~~E~~RI~ 193 (330)
T KOG0698|consen 126 TDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRK-----GGVAVQLSVDHKPDREDERERIE 193 (330)
T ss_pred HHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecC-----CCeeeeCCCCCCCCcHHHHHHHH
Confidence 99988865 1113567888888888855 99999999999999986 13899999999999999999999
Q ss_pred HcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEE
Q 015823 208 ALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFA 287 (399)
Q Consensus 208 ~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILa 287 (399)
+.+ +.+....+.|||.|.|++||||||..+|. ++|+++|++....+...|+|||||
T Consensus 194 ~~G----G~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~deFLiLa 249 (330)
T KOG0698|consen 194 AAG----GRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDDEFLILA 249 (330)
T ss_pred HcC----CEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCCcEEEEe
Confidence 987 55555556799999999999999999885 349999999999999999999999
Q ss_pred cCCCcccCCHHHHHHHHHcCC----C-chHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCCcc
Q 015823 288 SDGLWEHLSNQEAVDIVQNHP----Q-SGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLV 362 (399)
Q Consensus 288 SDGlwd~ls~~ei~~iv~~~~----~-~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~~ 362 (399)
||||||+|++||++++|+... . ..++..|...| +.|++.||||||||+|.+...
T Consensus 250 sDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a---------------------~~~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 250 SDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEA---------------------LSRGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred CCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHH---------------------hhcCCCCCeEEEEEEecCccc
Confidence 999999999999999999853 1 23333333333 356789999999999998753
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.2e-46 Score=367.27 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=198.0
Q ss_pred eeeeecCCCCCcchhhhccCccc---c-CCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHH
Q 015823 51 SMAVVQANNLLEDQSQVESGSLS---T-HEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAY 126 (399)
Q Consensus 51 s~~~~~~~~~~ED~~~v~~~~~~---~-~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~ 126 (399)
..+..+.|..|||++.+...... . ........||||||||||+.+|++|+++|++.|.+.... .....++|.++|
T Consensus 69 ~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~-~~~~~~al~~af 147 (365)
T PLN03145 69 AWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF-PREIEKVVSSAF 147 (365)
T ss_pred EEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHH
Confidence 34555679999999866322110 0 011223589999999999999999999999998763221 234567899999
Q ss_pred HHHHHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHH
Q 015823 127 QATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQEL 206 (399)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri 206 (399)
..+++.|.+.... . ....+|||++++++.++.+|||||||||+|+++. +.+++||+||++.++.|++||
T Consensus 148 ~~~d~~~~~~~~~----~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI 216 (365)
T PLN03145 148 LQTDTAFAEACSL----D-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRR------GKAIEMSRDHKPMCSKERKRI 216 (365)
T ss_pred HHHhHHHHhhhcc----c-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcC------CeEEEecCCCCCCCHHHHHHH
Confidence 9999988664321 1 1245999999999999999999999999999996 789999999999999999999
Q ss_pred HHcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEE
Q 015823 207 QALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIF 286 (399)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLIL 286 (399)
.+.+. .+ .. .|+.|.+++||||||..+|.... ...+.++++|++..+++.++|.||||
T Consensus 217 ~~~Gg----~v-~~---g~v~g~l~vTRalGD~~~k~~k~--------------~~~~~vs~ePdv~~~~l~~~D~fLIL 274 (365)
T PLN03145 217 EASGG----YV-YD---GYLNGQLNVARALGDWHMEGMKG--------------SDGGPLSAEPELMTTQLTEEDEFLII 274 (365)
T ss_pred HHcCC----ce-ec---ceECCcccccccccccccccccc--------------ccCCCcceEEEEEEEECCCCCEEEEE
Confidence 87652 22 22 28899999999999998874320 01123688999999999999999999
Q ss_pred EcCCCcccCCHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCC
Q 015823 287 ASDGLWEHLSNQEAVDIVQNH-----PQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS 360 (399)
Q Consensus 287 aSDGlwd~ls~~ei~~iv~~~-----~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 360 (399)
|||||||+|+++|++++++.. ..+.+|+.|++.|+. |++.||||||||+|+..
T Consensus 275 aSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~---------------------rgs~DNITvIVV~l~~~ 332 (365)
T PLN03145 275 GCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK---------------------RKSGDNLAVVVVCFQSQ 332 (365)
T ss_pred eCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------CCCCCCEEEEEEEeecC
Confidence 999999999999998877542 235677888888764 45789999999999974
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=334.10 Aligned_cols=260 Identities=22% Similarity=0.378 Sum_probs=209.2
Q ss_pred ccceeeeeeecCCC-CCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhcc-----C--Cc
Q 015823 46 VSGEFSMAVVQANN-LLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQ-----Q--SM 117 (399)
Q Consensus 46 ~~~~~s~~~~~~~~-~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~-----~--~~ 117 (399)
..-+|.++.+|.|+ .|||++....+- .++-++|.||+|||||.|++.|.+++++|.+.|...-... . ..
T Consensus 20 Nglryg~SSMQGWR~eMEDah~A~~~l---~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~ 96 (379)
T KOG0697|consen 20 NGLRYGVSSMQGWRVEMEDAHTAVAGL---PSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVEN 96 (379)
T ss_pred CceeeeeccccchhhhhhhhhhhhhcC---CCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHH
Confidence 34458888899876 799999664432 2445679999999999999999999999999886421111 1 24
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCC
Q 015823 118 SADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNA 197 (399)
Q Consensus 118 ~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~ 197 (399)
.+.-|+..|.+.++.+........ ...++|||++.+++...++|++|+||||++++|+ +.+..-|+||+|
T Consensus 97 ~~~GIrtGFL~iDE~mr~~~~~~~----~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rn------g~~~f~TqDHKP 166 (379)
T KOG0697|consen 97 VEKGIRTGFLSIDEIMRTLSDISK----GSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRN------GEVVFSTQDHKP 166 (379)
T ss_pred HHhhHhhcceeHHHHHhhhhhhhc----ccccCCceEEEEEecCceEEEEecCcchhheecC------CceEEeccCCCC
Confidence 567788899888887665443222 2256999999999999999999999999999997 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEc
Q 015823 198 CIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQL 277 (399)
Q Consensus 198 ~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l 277 (399)
.++.|++||+..+ +.+..+ ||+|.|++||||||++||... ......++|+++|+|....-
T Consensus 167 ~~p~EkeRIqnAG----GSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~R 226 (379)
T KOG0697|consen 167 YLPKEKERIQNAG----GSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIER 226 (379)
T ss_pred CChHHHHHHhcCC----CeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEeec
Confidence 9999999998876 444443 999999999999999999764 22235688999999999999
Q ss_pred CCCCeEEEEEcCCCcccCCHHHHHHHHHcCCC-----chHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEE
Q 015823 278 QPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQ-----SGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITV 352 (399)
Q Consensus 278 ~~~D~fLILaSDGlwd~ls~~ei~~iv~~~~~-----~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTv 352 (399)
...|+||||||||+||+|+++|++++|+.... ...+...++.+| -.|++||+|+
T Consensus 227 ~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCL---------------------hKGSRDNMsi 285 (379)
T KOG0697|consen 227 SEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCL---------------------HKGSRDNMSI 285 (379)
T ss_pred cccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHH---------------------hccCccCceE
Confidence 99999999999999999999999999987532 344555555544 4467999999
Q ss_pred EEEEcCC
Q 015823 353 IVVFLDS 359 (399)
Q Consensus 353 ivv~l~~ 359 (399)
|+|.|..
T Consensus 286 vlvcfp~ 292 (379)
T KOG0697|consen 286 VLVCFPG 292 (379)
T ss_pred EEEecCC
Confidence 9999965
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.5e-43 Score=348.39 Aligned_cols=242 Identities=27% Similarity=0.342 Sum_probs=192.3
Q ss_pred eeeeeecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHH
Q 015823 50 FSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQAT 129 (399)
Q Consensus 50 ~s~~~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~ 129 (399)
.+.+..+.|..|||++.+.. .+...||||||||||..+|++++++|...+.+... ....+.|+++|..+
T Consensus 25 g~~s~~G~R~~nED~~~v~~--------~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~---~~~~~~l~~a~~~~ 93 (381)
T PTZ00224 25 ASACVNGYRESMEDAHLLYL--------TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPE---PMTDERMEELCLEI 93 (381)
T ss_pred EEEeCCCCCCCCCCeeEecc--------CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccc---cccHHHHHHHHHHH
Confidence 34456667889999987622 12346999999999999999999999987754321 22356789999999
Q ss_pred HHHHHHHhhhcCCCCCCcccccceEEEEEEe-CCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHH
Q 015823 130 EEGFMSLVTKQWPMKPQIAAVGSCCLVGVIC-GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQA 208 (399)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~-~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~ 208 (399)
++++.+.. ..+|||++++++. ++++|||||||||+|+++. +++++||.||++.++.|+.||..
T Consensus 94 d~~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI~~ 157 (381)
T PTZ00224 94 DEEWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRD------GKLVFATEDHKPNNPGERQRIEA 157 (381)
T ss_pred HHHHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEEC------CEEEEcccCCCCCCHHHHhHHHH
Confidence 99887531 2358999988876 5799999999999999996 78999999999999999999976
Q ss_pred cCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEc
Q 015823 209 LHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFAS 288 (399)
Q Consensus 209 ~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaS 288 (399)
.+. . +.. .|+.|.+++||||||..+|..+. .+..++.|+++|++..+.+.++| ||||||
T Consensus 158 ~gg----~-v~~---~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaS 216 (381)
T PTZ00224 158 CGG----R-VVS---NRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILAC 216 (381)
T ss_pred ccC----E-ecc---ccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEEC
Confidence 542 1 122 38999999999999998886542 11234568899999999999888 889999
Q ss_pred CCCcc-cCCHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCC
Q 015823 289 DGLWE-HLSNQEAVDIVQNH-----PQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS 360 (399)
Q Consensus 289 DGlwd-~ls~~ei~~iv~~~-----~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 360 (399)
||||| +++++|+++++... ..+.+|+.|++.|+. ||+.||||||||+|...
T Consensus 217 DGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~---------------------rGs~DNITvIvV~~~~~ 273 (381)
T PTZ00224 217 DGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR---------------------RGSKDNISCLIVQLKDG 273 (381)
T ss_pred CCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh---------------------cCCCCCEEEEEEEeeCC
Confidence 99999 89999999999742 235678888888764 56789999999999875
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6.7e-44 Score=336.69 Aligned_cols=236 Identities=34% Similarity=0.501 Sum_probs=182.6
Q ss_pred eecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCC-chHHHHHHHHHH-HHH
Q 015823 54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS-MSADVIRKAYQA-TEE 131 (399)
Q Consensus 54 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~~-~~~ 131 (399)
..+.|..|||.+.+....... .......+|+|||||||..++++++++++..+......... ...++|..+|.. +++
T Consensus 7 ~~g~r~~~eD~~~~~~~~~~~-~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~ 85 (254)
T PF00481_consen 7 MQGVRKEMEDRHLIIQNFNSN-SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDE 85 (254)
T ss_dssp EECTSSSHHEEEEEEEEETCC-TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCEEEEecCcccc-CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeecccc
Confidence 445678999999874422211 33456799999999999999999999999888876655444 678899999999 888
Q ss_pred HHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEE-EEccCCCCCCCHHHHHHHHHcC
Q 015823 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLA-IQLSTEHNACIESVRQELQALH 210 (399)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~-~~LT~dH~~~~~~e~~ri~~~~ 210 (399)
.+...... . ....+|||++++++.+++||+|||||||+|+++. ... ++||+||+|.++.|+.||++.+
T Consensus 86 ~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~------~~~~~~Lt~dH~~~~~~E~~RI~~~g 154 (254)
T PF00481_consen 86 SLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRN------GGIIKQLTRDHKPSNPDERERIRKAG 154 (254)
T ss_dssp HHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEET------TEEEEESS---STTSHHHHHHHHHTT
T ss_pred cccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeec------cccccccccccccchhhccceeeccc
Confidence 77763221 0 1267899999999999999999999999999997 444 5999999999999999999987
Q ss_pred CCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCC
Q 015823 211 PDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDG 290 (399)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDG 290 (399)
+. +.. .+|+.|.|++||||||..+|..+ +++|+++|++..+++.++|.||||||||
T Consensus 155 g~----v~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~flvlaSDG 210 (254)
T PF00481_consen 155 GR----VSE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFLVLASDG 210 (254)
T ss_dssp -G----EEE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEEEEE-HH
T ss_pred cc----ccc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEEEEEccc
Confidence 42 322 46999999999999999988632 3569999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHcCC-----CchHHHHHHHHHHHHHH
Q 015823 291 LWEHLSNQEAVDIVQNHP-----QSGSARRLVKAALQEAA 325 (399)
Q Consensus 291 lwd~ls~~ei~~iv~~~~-----~~~~a~~Lv~~al~~~a 325 (399)
|||+|+++|+++++++.. ++.+|+.|++.|+..+.
T Consensus 211 lwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs 250 (254)
T PF00481_consen 211 LWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGS 250 (254)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTH
T ss_pred ccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Confidence 999999999999998753 35678888888875443
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=314.87 Aligned_cols=231 Identities=26% Similarity=0.405 Sum_probs=187.2
Q ss_pred CCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCC-c----hHHHHHHHHHHHHH
Q 015823 57 ANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS-M----SADVIRKAYQATEE 131 (399)
Q Consensus 57 ~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-~----~~~~l~~a~~~~~~ 131 (399)
.|..|||++.+.. ...... ..||+|||||||++++++|++.+++.|.+.+.+... . ..+.|.+++..+++
T Consensus 19 ~R~~NeD~~~~~~----~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~ 93 (262)
T COG0631 19 VRKHNEDAFLIKP----NENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANE 93 (262)
T ss_pred ccCCCCcceeecc----ccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHH
Confidence 4668999998732 111122 469999999999999999999999999987655331 1 46889999999999
Q ss_pred HHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCC
Q 015823 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHP 211 (399)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~ 211 (399)
.+..... .+.....||||++++++.++++|+|||||||+|++++ +.++|||.||++.++.++.++.. +
T Consensus 94 ~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~------~~~~~lT~DH~~~~~~~~~~~~~--~ 161 (262)
T COG0631 94 AIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRD------GELKQLTEDHSLVNRLEQRGIIT--P 161 (262)
T ss_pred HHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcC------CceEEeccCCcHHHHHHHhcCCC--H
Confidence 8887633 2344578999999999999999999999999999997 79999999999999988876432 2
Q ss_pred CCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCC
Q 015823 212 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGL 291 (399)
Q Consensus 212 ~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGl 291 (399)
.+...++.++ ++|||||+.. ..+|++....+.++| |||||||||
T Consensus 162 ~~~~~~~~~~---------~ltralG~~~--------------------------~~~p~~~~~~~~~~d-~llL~SDGl 205 (262)
T COG0631 162 EEARSHPRRN---------ALTRALGDFD--------------------------LLEPDITELELEPGD-FLLLCSDGL 205 (262)
T ss_pred HHHHhCccch---------hhhhhcCCCc--------------------------ccceeEEEEEcCCCC-EEEEECCCC
Confidence 2222233333 8999999983 278999999999995 888999999
Q ss_pred cccCCHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCCc
Q 015823 292 WEHLSNQEAVDIVQN-HPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSL 361 (399)
Q Consensus 292 wd~ls~~ei~~iv~~-~~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~ 361 (399)
||.+++++++++++. ...+.++.+|++.|++. +++||||+++|.+....
T Consensus 206 ~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~---------------------g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 206 WDVVSDDEIVDILKNSETPQEAADKLIELALEG---------------------GGPDNITVVLVRLNGEG 255 (262)
T ss_pred ccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhc---------------------CCCCceEEEEEEeeccc
Confidence 999999999999995 55678899999998863 45899999999998764
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=299.28 Aligned_cols=173 Identities=32% Similarity=0.497 Sum_probs=144.8
Q ss_pred ccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeec
Q 015823 148 AAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVK 227 (399)
Q Consensus 148 ~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~ 227 (399)
..+|||++|+++.+++|||||.||||+|++|. ++++-||.||+|..+.|-.||...+ +.+.+.. ||+
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~------GkAvdmS~DHKPEDevE~~RI~~AG----G~vtlDG---RVN 394 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRN------GKAVDMSVDHKPEDEVETNRIHAAG----GQVTLDG---RVN 394 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecC------CceeecccCCCcccHHHHHHHHhcC----CeEeecc---eec
Confidence 45899999999999999999999999999997 9999999999999999999999887 4455544 999
Q ss_pred CccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcC
Q 015823 228 GLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNH 307 (399)
Q Consensus 228 G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~ 307 (399)
|.|.+||||||..||... .-|.+.++|++-|+|....|.|.|.|+|+||||||++|+.+|++++|+..
T Consensus 395 GGLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~ 462 (542)
T KOG0699|consen 395 GGLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDL 462 (542)
T ss_pred Cccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHH
Confidence 999999999999998753 12345688999999999999999999999999999999999999999864
Q ss_pred CC-----chHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCC
Q 015823 308 PQ-----SGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS 360 (399)
Q Consensus 308 ~~-----~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 360 (399)
.. ..++..|+.++|.-.- .-.+-.+||+|||++.|+.+
T Consensus 463 l~~n~~ls~iceeL~D~CLAp~T---------------~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 463 LAKNSSLSEICEELCDACLAPST---------------DGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HhcCchHHHHHHHHHHhhcCCCC---------------CCCCcCCCcceEEEEEeccc
Confidence 32 3456666666653211 01234689999999999864
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=9.2e-36 Score=308.58 Aligned_cols=243 Identities=17% Similarity=0.229 Sum_probs=169.3
Q ss_pred eeec-CCCCCcchhhhccCccc--cCCC--CCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccC---CchHHHHHH
Q 015823 53 AVVQ-ANNLLEDQSQVESGSLS--THEF--GPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQ---SMSADVIRK 124 (399)
Q Consensus 53 ~~~~-~~~~~ED~~~v~~~~~~--~~~~--~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~---~~~~~~l~~ 124 (399)
+-.| .|..|||++.+...... .... .....||+|||||||+.+++.|++.+.+.|.+++.... ....+.|++
T Consensus 381 Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ 460 (645)
T PRK14559 381 TDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIRE 460 (645)
T ss_pred CCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 3445 47899998866321100 0000 01246899999999999877777777776665443211 123567999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHH
Q 015823 125 AYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQ 204 (399)
Q Consensus 125 a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ 204 (399)
+|..+++.+.+...+.. ......||||++++++.++.+|++||||||+|++++ ++.+++||+||++..++.+.
T Consensus 461 ai~~AN~~I~~~~~~~~--~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r-----~g~l~QLT~DHs~~~~lv~~ 533 (645)
T PRK14559 461 AIYLANEAIYDLNQQNA--RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTR-----KGGLEQLTVDHEVGQREIQR 533 (645)
T ss_pred HHHHHHHHHHHHhhhcc--cccCCCCCceeeeEEEECCEEEEEEecCceEEEEec-----CCeEEEeCCCCCHHHHHHHh
Confidence 99999999987543321 112356999999999999999999999999999864 26899999999997665443
Q ss_pred HHHHcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEE
Q 015823 205 ELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFV 284 (399)
Q Consensus 205 ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fL 284 (399)
++ .+.+....+ +...+|||||+...+ ..+|++..+.+.++| +|
T Consensus 534 Gi---~~~~a~~~p---------~~~~LTrALG~~~~~------------------------~l~Pdi~~~~L~~gD-~l 576 (645)
T PRK14559 534 GV---EPQIAYARP---------DAYQLTQALGPRDNS------------------------AIQPDIQFLEIEEDT-LL 576 (645)
T ss_pred CC---CHHHHhcCc---------ccceeeeccCCCCCC------------------------cccceEEEEEcCCCC-EE
Confidence 21 111111111 233899999986432 457999999999887 66
Q ss_pred EEEcCCCccc--CCH---HHHHHHHHcCC-CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcC
Q 015823 285 IFASDGLWEH--LSN---QEAVDIVQNHP-QSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLD 358 (399)
Q Consensus 285 ILaSDGlwd~--ls~---~ei~~iv~~~~-~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~ 358 (399)
|||||||||+ +.+ +++..++.... ...++++|++.|+. ++++||||+|||+++
T Consensus 577 LLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~---------------------~gg~DNITvIvV~l~ 635 (645)
T PRK14559 577 LLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQ---------------------YNGHDNITAILVRLK 635 (645)
T ss_pred EEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------------------cCCCCcEEEEEEEec
Confidence 7799999994 554 34556665543 35678888888864 456899999999997
Q ss_pred CC
Q 015823 359 SS 360 (399)
Q Consensus 359 ~~ 360 (399)
..
T Consensus 636 ~~ 637 (645)
T PRK14559 636 VR 637 (645)
T ss_pred cC
Confidence 54
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.4e-34 Score=271.47 Aligned_cols=238 Identities=37% Similarity=0.558 Sum_probs=188.1
Q ss_pred eecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhcc----CCchHHHHHHHHHHH
Q 015823 54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQ----QSMSADVIRKAYQAT 129 (399)
Q Consensus 54 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~ 129 (399)
..+.|..|||++.+...... .++.+|+|||||||+..++++++.+.+.+.+..... .......|+++|..+
T Consensus 8 ~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (254)
T cd00143 8 KGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRA 82 (254)
T ss_pred CCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence 33456789999877321100 246899999999999999999999999998876544 234567788899988
Q ss_pred HHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHc
Q 015823 130 EEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQAL 209 (399)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~ 209 (399)
++.+....... .....+|||++++++.++.++++|+||||+|++++ +.++++|.||++.++.++.||...
T Consensus 83 ~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~------~~~~~lt~dh~~~~~~~~~~i~~~ 152 (254)
T cd00143 83 DEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRN------GEAVQLTKDHKPVNEEERERIEKA 152 (254)
T ss_pred HHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcC------CceeEcCCCCCCcChHHHHHHHHc
Confidence 88887654321 23366899999999999999999999999999997 689999999999998888888776
Q ss_pred CCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEc-CCCCeEEEEEc
Q 015823 210 HPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQL-QPHDQFVIFAS 288 (399)
Q Consensus 210 ~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l-~~~D~fLILaS 288 (399)
++... ..+.++...+||+||+..+| +.+..+|++..+.+ .++| +|||||
T Consensus 153 ~~~~~--------~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d-~ill~S 202 (254)
T cd00143 153 GGRVS--------NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDD-FLILAS 202 (254)
T ss_pred CCcEE--------eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCc-EEEEEC
Confidence 53211 12455566999999998766 23688999999999 7777 678899
Q ss_pred CCCcccCCHHHHHHHHHcCC----CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEc
Q 015823 289 DGLWEHLSNQEAVDIVQNHP----QSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 357 (399)
Q Consensus 289 DGlwd~ls~~ei~~iv~~~~----~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l 357 (399)
|||||+++++++.+++.... .+.++++|++.|... ++.||+|+||+++
T Consensus 203 DG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~---------------------~~~Dn~t~i~~~~ 254 (254)
T cd00143 203 DGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR---------------------GSHDNITVVVVRL 254 (254)
T ss_pred CCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC---------------------CCCCCEEEEEEeC
Confidence 99999999999999998754 467788888777643 3589999999975
No 11
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.7e-34 Score=266.41 Aligned_cols=234 Identities=40% Similarity=0.640 Sum_probs=185.8
Q ss_pred ecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCC---chHHHHHHHHHHHHH
Q 015823 55 VQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS---MSADVIRKAYQATEE 131 (399)
Q Consensus 55 ~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~~~ 131 (399)
.+.+..|||++.+.... .....+|+|||||||..+|+++++.+...+.+....... .+.+.|++++..+++
T Consensus 14 ~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (255)
T smart00332 14 QGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDE 87 (255)
T ss_pred CCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHH
Confidence 45678999998773211 134789999999999999999999999988876443322 467789999999998
Q ss_pred HHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCC
Q 015823 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHP 211 (399)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~ 211 (399)
.+........ ....+|||++++++.++.+|++|+||||+|+++. +.+.+||.||++.++.+..||...+.
T Consensus 88 ~~~~~~~~~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~------~~~~~lt~dh~~~~~~~~~~i~~~~~ 157 (255)
T smart00332 88 EILEELESLE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRN------GKAVQLTEDHKPSNEDERARIEAAGG 157 (255)
T ss_pred HHHHhhhhcc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeC------CceeEcCCCCCCcCHHHHHHHHHcCC
Confidence 8877644322 2356899999999999999999999999999996 67899999999999988888876543
Q ss_pred CCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEc-CCCCeEEEEEcCC
Q 015823 212 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQL-QPHDQFVIFASDG 290 (399)
Q Consensus 212 ~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l-~~~D~fLILaSDG 290 (399)
...+ ++.++...+||++|+..+| |.+..+|++...++ .++| +|||||||
T Consensus 158 -----~~~~---~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~SDG 207 (255)
T smart00332 158 -----FVIN---GRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILASDG 207 (255)
T ss_pred -----EEEC---CeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEECCc
Confidence 1111 1566667999999998665 45889999999996 7777 67889999
Q ss_pred CcccCCHHHHHHHHHcCC----CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEE
Q 015823 291 LWEHLSNQEAVDIVQNHP----QSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVV 355 (399)
Q Consensus 291 lwd~ls~~ei~~iv~~~~----~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv 355 (399)
||++++++++.+++.... ...+++.|++.|.. ++..||+|+|||
T Consensus 208 v~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~---------------------~~~~Dn~T~ivv 255 (255)
T smart00332 208 LWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALA---------------------RGSKDNITVIVV 255 (255)
T ss_pred cccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH---------------------cCCCCCeEEEEC
Confidence 999999999999998753 45667777776653 346899999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-29 Score=231.38 Aligned_cols=252 Identities=32% Similarity=0.427 Sum_probs=178.9
Q ss_pred CCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhh----c-------------------------------c----C
Q 015823 75 HEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTS----D-------------------------------Q----Q 115 (399)
Q Consensus 75 ~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~----~-------------------------------~----~ 115 (399)
+...-++.+|.+||||.|..+|-.|+..+.+.+...+. . . +
T Consensus 138 ~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 138 FAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 34456689999999999999998888888777644221 0 0 0
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCC
Q 015823 116 SMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEH 195 (399)
Q Consensus 116 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH 195 (399)
.....+|..||+..++++.+.- +.|. ..+|||+++++..-++||+||.|||||+++|+ +.+..||.+.
T Consensus 218 ~LViGAlEsAFqemDeqiarer-~~~~-----~~GGCtalvvi~llGKlYvaNAGDsRAIlVrn------deirplS~ef 285 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARER-QVWR-----LPGGCTALVVIVLLGKLYVANAGDSRAILVRN------DEIRPLSKEF 285 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHH-Hhhc-----CCCCceEEEeeeeccceEEccCCCceEEEEec------CCeeeccccc
Confidence 2234578888988888876542 2222 45799999999999999999999999999997 8999999999
Q ss_pred CCCCHHHHHHHHHcCCC----------------------CCCeEEEeC-------------------------CeeeecC
Q 015823 196 NACIESVRQELQALHPD----------------------DSQIVVLKH-------------------------NVWRVKG 228 (399)
Q Consensus 196 ~~~~~~e~~ri~~~~~~----------------------~~~~~~~~~-------------------------~~~rv~G 228 (399)
+| +.||+|++.+.=. -++.+.++. ..-|+.+
T Consensus 286 TP--etERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~ 363 (493)
T KOG1323|consen 286 TP--ETERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLA 363 (493)
T ss_pred Cc--HHHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhh
Confidence 88 5568888765310 011122221 1126788
Q ss_pred ccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCC----CCeEEEEEcCCCcccCCHHHHHHHH
Q 015823 229 LIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQP----HDQFVIFASDGLWEHLSNQEAVDIV 304 (399)
Q Consensus 229 ~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~----~D~fLILaSDGlwd~ls~~ei~~iv 304 (399)
.+.+||.|||..+|-..-+ -..+|++++.|+|++.+|.. .|..||||||||||+++++|+..+|
T Consensus 364 TigVsRGlGDH~Lkv~dsn------------l~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~V 431 (493)
T KOG1323|consen 364 TIGVSRGLGDHHLKVVDSN------------LSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIV 431 (493)
T ss_pred hheeccccCcceeeeecCC------------cccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHH
Confidence 8999999999999865422 12478999999999999864 3558999999999999999999999
Q ss_pred HcCCC----------chHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCC
Q 015823 305 QNHPQ----------SGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS 360 (399)
Q Consensus 305 ~~~~~----------~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 360 (399)
+...+ ..+|+.|+..|..... .+..+.+ .-+-++.|||||.||-+...
T Consensus 432 rs~L~~~dp~Dp~RYt~aaqdlva~arg~~k-~rgWr~~-------n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 432 RSFLPSTDPADPSRYTQAAQDLVAAARGQQK-DRGWRMN-------NGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred HHhcCCCCCCChhHHHHHHHHHHHHhcCccC-CCceecc-------CCCcCCCCceEEEEEeccCC
Confidence 87532 2345555544432211 1111111 11347889999999988753
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=3.6e-23 Score=192.46 Aligned_cols=221 Identities=22% Similarity=0.260 Sum_probs=145.3
Q ss_pred CCcchhhhccCccccCCCCCceEEEEEecCCCchH-----HHHHHHHHHHHHHHHhhhcc---CCchHHHHHHHHHHHHH
Q 015823 60 LLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPE-----TSRYINDHLFQHLKRFTSDQ---QSMSADVIRKAYQATEE 131 (399)
Q Consensus 60 ~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~-----as~~a~~~l~~~l~~~~~~~---~~~~~~~l~~a~~~~~~ 131 (399)
.=||+|++- ..+...+.|||||+|||. .+.|..+. .....+..... ...+...|.+|+.++-+
T Consensus 90 ~GEDa~Fvs--------s~~~~~v~GVADGVGGWa~~GiDpg~fS~eL-M~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~ 160 (330)
T KOG1379|consen 90 GGEDAWFVS--------SNPHAIVMGVADGVGGWAEYGIDPGAFSREL-MSNCERLVQNSDFNPSDPVNLLEKAYAELKS 160 (330)
T ss_pred CCCcceeec--------cCcccceEEEccccchHhhcCcCHHHHHHHH-HHHHHHHhcccccCCCChHHHHHHHHHHHhh
Confidence 458988882 234578999999999997 67765444 44444433322 24677888888876543
Q ss_pred HHHHHhhhcCCCCCCcccccceEEEEEEe--CCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCC--CCHHHHHHHH
Q 015823 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVIC--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNA--CIESVRQELQ 207 (399)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~--~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~--~~~~e~~ri~ 207 (399)
+ +....++||++++.+. +++||+||+|||...++|+ +++++-|..+.. +.+-. .
T Consensus 161 ~------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~------G~vv~~S~~Q~H~FN~PyQ----L 218 (330)
T KOG1379|consen 161 Q------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVRE------GKVVFRSPEQQHYFNTPYQ----L 218 (330)
T ss_pred c------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEEC------CEEEEcCchheeccCCcee----e
Confidence 1 1124467888888887 8899999999999999997 888877765432 22211 1
Q ss_pred HcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEE
Q 015823 208 ALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFA 287 (399)
Q Consensus 208 ~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILa 287 (399)
.+.|.+ ....++|. .-.-+++.++++++| +||||
T Consensus 219 s~~p~~------------------~~~~~~d~---------------------------p~~ad~~~~~v~~GD-vIilA 252 (330)
T KOG1379|consen 219 SSPPEG------------------YSSYISDV---------------------------PDSADVTSFDVQKGD-VIILA 252 (330)
T ss_pred ccCCcc------------------ccccccCC---------------------------ccccceEEEeccCCC-EEEEe
Confidence 111111 01112221 223368899999999 67889
Q ss_pred cCCCcccCCHHHHHHHHHcCCC------chHHHHHHHHHHHHHHHhhhhhhhhh--hccccccCCccCCceEEEEEEc
Q 015823 288 SDGLWEHLSNQEAVDIVQNHPQ------SGSARRLVKAALQEAAKKREMRYSDL--KKIDRGVRRHFHDDITVIVVFL 357 (399)
Q Consensus 288 SDGlwd~ls~~ei~~iv~~~~~------~~~a~~Lv~~al~~~a~~~~~~~~~l--~~~~~~~~r~~~DNiTvivv~l 357 (399)
||||||+|.+++|++++..... +..|++++..|.+.+-.....+-... +.-...+.+|+.|||||||..+
T Consensus 253 TDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 253 TDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 9999999999999999976533 56778888777666533322222111 2222335677899999999753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=4e-19 Score=184.80 Aligned_cols=216 Identities=22% Similarity=0.299 Sum_probs=173.7
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEEe
Q 015823 81 GTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVIC 160 (399)
Q Consensus 81 ~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~ 160 (399)
...||.+||-+-.+...++...+..++.+....... ..+.|+.+|...++++-... ..-|..++.+.+.
T Consensus 551 ~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~-et~~mr~~fl~~~rklg~~g----------~~lg~~~~~~~i~ 619 (1081)
T KOG0618|consen 551 QATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGN-ETEQMRNTFLRLNRKLGEEG----------QVLGGSVVLCQIV 619 (1081)
T ss_pred cceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHhhhhhhhh----------ccccchhhheeec
Confidence 478999999999999999999999999887765543 34559999999998874432 1224444444454
Q ss_pred C--------CEEEEEEcCCceeEEEEEeccCCceEEEEccCCC-CCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCccc
Q 015823 161 G--------GTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEH-NACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQ 231 (399)
Q Consensus 161 ~--------~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH-~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ 231 (399)
. .++++||+|+|.++++++ ++..++|+-. ...+++|.+||+..+ +++... .+++|...
T Consensus 620 ~d~~~~asS~~l~~Anvg~c~avls~n------g~~~p~t~~~~~~v~~eE~~RI~~~~----g~i~ed---~k~ngvt~ 686 (1081)
T KOG0618|consen 620 EDSLSPASSKTLFAANVGTCMAVLSRN------GKPLPTTRSPMLEVDREEYKRIVDSK----GFITED---NKLNGVTS 686 (1081)
T ss_pred ccccCcccchhhhHhhhccchhhhhhc------CCcCcccccccccCCHHHHHHHHHhc----CeecCC---Ceeeceee
Confidence 3 378999999999999997 6667776665 344889999998765 233222 38999999
Q ss_pred cccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcCCC-c
Q 015823 232 VSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQ-S 310 (399)
Q Consensus 232 vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~~~-~ 310 (399)
.||++|-+... |.|.+.|+|....|.+.|+|||+++-+||++|+-++++++|++... -
T Consensus 687 ~tR~iG~~~l~---------------------P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL 745 (1081)
T KOG0618|consen 687 STRAIGPFSLF---------------------PHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPL 745 (1081)
T ss_pred eeeeccccccc---------------------ccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchH
Confidence 99999998654 6799999999999999999999999999999999999999997654 4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCCcc
Q 015823 311 GSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLV 362 (399)
Q Consensus 311 ~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~~ 362 (399)
.+|++|+..|...++ .||++|+||++....-
T Consensus 746 ~AAkKL~d~AqSYgc---------------------~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 746 LAAKKLCDLAQSYGC---------------------AENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHHHHHHHHHhccc---------------------ccCeeEEEEEeecchh
Confidence 688999999998876 7999999999987543
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.77 E-value=5.9e-18 Score=155.11 Aligned_cols=185 Identities=21% Similarity=0.261 Sum_probs=97.3
Q ss_pred eecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHH-HHHHHHHHHHH
Q 015823 54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADV-IRKAYQATEEG 132 (399)
Q Consensus 54 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~~~ 132 (399)
..+.+.+|||++.+.. .+++.+++|+||+||...++.++..+++.+.+.+.......... ....+..+.++
T Consensus 5 h~~~~~~nqD~~~~~~--------~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T PF13672_consen 5 HRGRGAPNQDAFGIRT--------DDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKE 76 (212)
T ss_dssp --TTSSS--EEEEEE---------TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCEEeee--------CCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 4566789999987522 23357779999999877666666666666655444333222211 33333333333
Q ss_pred HHHHh---hhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHc
Q 015823 133 FMSLV---TKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQAL 209 (399)
Q Consensus 133 l~~~~---~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~ 209 (399)
+...+ ............++||++++++.++.++++|+||||+|+... ++.+..++.+|+... ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~-----~g~~~~l~~~~~~~~-------~~- 143 (212)
T PF13672_consen 77 ILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRR-----NGEIQQLTDDHSGEY-------PN- 143 (212)
T ss_dssp HHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEE-----TTEEEE-S---BHHH-------HH-
T ss_pred HHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEEC-----CCEEEEcCCCccchh-------hh-
Confidence 33211 000000113366899999999999999999999999987664 378899999995211 00
Q ss_pred CCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcC
Q 015823 210 HPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASD 289 (399)
Q Consensus 210 ~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSD 289 (399)
.++.+.... .....++..+.+.++|.| +||||
T Consensus 144 ----------------------~~~~~~~~~-------------------------~~~~~~~~~~~~~~~d~i-lL~SD 175 (212)
T PF13672_consen 144 ----------------------QTRSLTGDD-------------------------PEPDVQYGSIPLEEGDVI-LLCSD 175 (212)
T ss_dssp ----------------------CTTSCCHHC-------------------------CCTETEEEEEE--TT-EE-EEE-H
T ss_pred ----------------------hhhccCccc-------------------------cccCCeEEEEEcCCCCEE-EEECc
Confidence 112222210 111225666778888865 56999
Q ss_pred CCcccCCHHH-HHHHHHcC
Q 015823 290 GLWEHLSNQE-AVDIVQNH 307 (399)
Q Consensus 290 Glwd~ls~~e-i~~iv~~~ 307 (399)
|||+.+.+.+ +..++...
T Consensus 176 G~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 176 GVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp HHHTTS-HHHHHHHH----
T ss_pred CccccCCCHHHHHHHhhhc
Confidence 9999998765 55666543
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.70 E-value=6.9e-16 Score=139.30 Aligned_cols=145 Identities=15% Similarity=0.165 Sum_probs=106.0
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEE-
Q 015823 81 GTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVI- 159 (399)
Q Consensus 81 ~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i- 159 (399)
..+++|+||||+...|.+++..+...+.+..... ..+.+.+..+++.+... ....+|+|++++.+
T Consensus 30 ~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-----~~~~~~l~~~n~~l~~~---------~~~~~~~T~~~~~id 95 (193)
T smart00331 30 RLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-----ISLSQILERLNRAIYEN---------GEDGMFATLFLALYD 95 (193)
T ss_pred eEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHHhc---------CCCCcEEEEEEEEEE
Confidence 5899999999999889999999998888765432 12455566666666543 11457999999988
Q ss_pred -eCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCcccccccccc
Q 015823 160 -CGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGD 238 (399)
Q Consensus 160 -~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd 238 (399)
..++++++|+||+|+|+++.+ +...+++.+ .++.+|.
T Consensus 96 ~~~~~l~~~~~Gd~~~~~~~~~-----~~~~~~~~~-------------------------------------~~~~lG~ 133 (193)
T smart00331 96 FAGGTLSYANAGHSPPYLLRAD-----GGLVEDLDD-------------------------------------LGAPLGL 133 (193)
T ss_pred CCCCEEEEEeCCCCceEEEECC-----CCeEEEcCC-------------------------------------CCceeee
Confidence 578999999999999999831 222333322 1233444
Q ss_pred ccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHcCC
Q 015823 239 VYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHP 308 (399)
Q Consensus 239 ~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~~ 308 (399)
. ...++++..+.+.++|. |+|+||||||.++.+++.+++.++.
T Consensus 134 ~--------------------------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l~~~~ 176 (193)
T smart00331 134 E--------------------------PDVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELLEELL 176 (193)
T ss_pred C--------------------------CCCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHHHHhc
Confidence 3 12345678889999995 5669999999999999999998764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.48 E-value=1.2e-12 Score=140.54 Aligned_cols=190 Identities=18% Similarity=0.162 Sum_probs=124.6
Q ss_pred CCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHh
Q 015823 58 NNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLV 137 (399)
Q Consensus 58 ~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~ 137 (399)
+....|.+.+.. .++...+++|+||+|+...|..++..+.+.+.+..... .. ...++..+|..+...
T Consensus 564 ~~vsGD~y~~~~-------l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-~~----~~~ai~~lN~~L~~~- 630 (764)
T TIGR02865 564 ELVSGDSYSFGK-------LSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-FD----REVAIKTVNSILSLR- 630 (764)
T ss_pred CcccCceEEEEE-------ECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHhC-
Confidence 446677765421 12334789999999966666677777777776654332 12 244556666655321
Q ss_pred hhcCCCCCCcccccceEEEEEEe--CCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCC
Q 015823 138 TKQWPMKPQIAAVGSCCLVGVIC--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQ 215 (399)
Q Consensus 138 ~~~~~~~~~~~~~GtT~~v~~i~--~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~ 215 (399)
....+.+|+.+++++ .+.+.++|+|+++.|+.++ +.+.+++..+-|
T Consensus 631 --------~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~------~~v~~i~s~~lP------------------ 678 (764)
T TIGR02865 631 --------STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRG------AKVEVIRSSNLP------------------ 678 (764)
T ss_pred --------CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEEC------CEEEEecCCCce------------------
Confidence 013468999988885 6899999999999999875 566666533211
Q ss_pred eEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccC
Q 015823 216 IVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHL 295 (399)
Q Consensus 216 ~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~l 295 (399)
+|-. -..+++....++.+|| +|||+|||+||..
T Consensus 679 --------------------lGil--------------------------~~~~~~~~~~~L~~GD-~Lll~SDGv~E~~ 711 (764)
T TIGR02865 679 --------------------IGIL--------------------------DEVDVELVRKKLKNGD-LIVMVSDGVLEGE 711 (764)
T ss_pred --------------------eEec--------------------------cCCccceEEEEeCCCC-EEEEECCCCCcCC
Confidence 2211 1234567788999999 5678999999988
Q ss_pred CHHH-----HHHHHHcC---CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEc
Q 015823 296 SNQE-----AVDIVQNH---PQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 357 (399)
Q Consensus 296 s~~e-----i~~iv~~~---~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l 357 (399)
++++ +.+++.+. ++++.++.+++.++.... ....||+|++++++
T Consensus 712 ~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~------------------~~~~DD~Tvlvirv 763 (764)
T TIGR02865 712 KEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS------------------GKIKDDMTVIVAKV 763 (764)
T ss_pred cccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC------------------CCCCCCeEEEEEEe
Confidence 7533 66777653 345667777777764421 12379999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.35 E-value=1.8e-10 Score=103.61 Aligned_cols=179 Identities=21% Similarity=0.222 Sum_probs=104.7
Q ss_pred ceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEEE
Q 015823 80 YGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVI 159 (399)
Q Consensus 80 ~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i 159 (399)
..+++.|+|+.|..-.|.+.+-.+...+....... .. ..+.+..+++.+...... ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LD----PEELLEALNRRLYRDLKG--------DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TS----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHHHhhh--------ccccceEEEEEe
Confidence 46899999999955555666666666666655332 22 344455556655433221 125778888776
Q ss_pred e--CCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCccccccccc
Q 015823 160 C--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIG 237 (399)
Q Consensus 160 ~--~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalG 237 (399)
. .+.++++|+|++++++++.. ......+.... -.+|
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~~----~~~~~~~~~~~--------------------------------------~~lG 107 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRPG----GREIEQLESEG--------------------------------------PPLG 107 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEETT----CTEEEEETCSS--------------------------------------BBCS
T ss_pred cccceEEEEeCCCCCCEEEEecc----ccceeecccCc--------------------------------------ccee
Confidence 5 56899999999999999951 01111111110 0133
Q ss_pred cccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHH-------HHHHHHHcCC--
Q 015823 238 DVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQ-------EAVDIVQNHP-- 308 (399)
Q Consensus 238 d~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~-------ei~~iv~~~~-- 308 (399)
-. -...+....+.+.++|. |+|+||||+|....+ ++.+++.+..
T Consensus 108 ~~--------------------------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~ 160 (193)
T PF07228_consen 108 IF--------------------------EDIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGL 160 (193)
T ss_dssp SS--------------------------CTTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS
T ss_pred ee--------------------------ccccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCC
Confidence 22 12334466888999995 677999999998443 4456666442
Q ss_pred -CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcC
Q 015823 309 -QSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLD 358 (399)
Q Consensus 309 -~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~ 358 (399)
.++.+..+++.+.... .....||+||++++++
T Consensus 161 ~~~~~~~~l~~~~~~~~------------------~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 161 SPQEIIDALLEAIDRFG------------------KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp -HHHHHHHHHHHHHHHT------------------TSSTSS-EEEEEEEE-
T ss_pred CHHHHHHHHHHHHHHhc------------------CCCCCCceEEEEEEEC
Confidence 2333444444433311 2235899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.98 E-value=0.00048 Score=68.57 Aligned_cols=180 Identities=19% Similarity=0.222 Sum_probs=103.4
Q ss_pred ceEEEEEecCCC-chHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEEE
Q 015823 80 YGTFVGVYDGHG-GPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGV 158 (399)
Q Consensus 80 ~~~l~gV~DGhG-G~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~ 158 (399)
...+++|.|..| |-.++-. +......+..........+.+. +..+++.+..... ..+=+|+..++
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~----l~~~n~~~~~~~~---------~~~f~T~~~~~ 239 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADV----LETLNRVLKQNLE---------EDMFVTLFLGV 239 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHH----HHHHHHHHHhccc---------CCcEEEEEEEE
Confidence 468899999998 6655544 3333333333322212233332 3333333332110 22567777777
Q ss_pred Ee--CCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCcccccccc
Q 015823 159 IC--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSI 236 (399)
Q Consensus 159 i~--~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRal 236 (399)
++ .+.+..+|+|=--+++.+.. +......|+ .....+
T Consensus 240 ~d~~~~~l~y~~aGH~p~~i~~~~---~~~~~~~l~--------------------------------------~~g~pi 278 (367)
T COG2208 240 YDLDSGELTYSNAGHEPALILSAD---GEIEVEDLT--------------------------------------ALGLPI 278 (367)
T ss_pred EeccCCEEEEeeCCCCCeeEEEcC---CCceeEEcc--------------------------------------CCCcee
Confidence 75 57899999999888888751 000011100 233445
Q ss_pred ccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcc-------cCCHHHHHHHHHcC--
Q 015823 237 GDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWE-------HLSNQEAVDIVQNH-- 307 (399)
Q Consensus 237 Gd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd-------~ls~~ei~~iv~~~-- 307 (399)
|-. -...+.+....+.+|| .|+|.|||+.| .+..+...+++..+
T Consensus 279 G~~--------------------------~~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~ 331 (367)
T COG2208 279 GLL--------------------------PDYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRLLG 331 (367)
T ss_pred eec--------------------------CCccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHHhC
Confidence 543 1344567788899988 67889999999 57777788887743
Q ss_pred -CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcC
Q 015823 308 -PQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLD 358 (399)
Q Consensus 308 -~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~ 358 (399)
+.++.+..+.+......+ ....+||+|+++++++
T Consensus 332 ~~~~e~~~~i~~~l~~~~~-----------------~~~~~DDiTll~lk~~ 366 (367)
T COG2208 332 QPAEEILEAILESLEELQG-----------------DQIQDDDITLLVLKVK 366 (367)
T ss_pred CCHHHHHHHHHHHHHHhhC-----------------CccccCceEEEEEEec
Confidence 223344444443333222 1234688999999875
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=46.71 E-value=12 Score=28.08 Aligned_cols=22 Identities=18% Similarity=0.389 Sum_probs=16.5
Q ss_pred CCCeEEEEEcCCCcccCCHHHHH
Q 015823 279 PHDQFVIFASDGLWEHLSNQEAV 301 (399)
Q Consensus 279 ~~D~fLILaSDGlwd~ls~~ei~ 301 (399)
+|.+||+ |+||+|=.+...-+.
T Consensus 26 ~G~Rllv-a~nGv~lEv~r~WL~ 47 (72)
T PF09436_consen 26 PGHRLLV-ASNGVFLEVRRPWLH 47 (72)
T ss_pred CCcEEEE-ecCcEEEEEechHHH
Confidence 7787765 999999877665443
Done!