RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015824
(399 letters)
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 734 bits (1896), Expect = 0.0
Identities = 319/379 (84%), Positives = 350/379 (92%), Gaps = 1/379 (0%)
Query: 16 LLFSV-QAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 74
LL V +AV+EKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETVP+RTVNRQ
Sbjct: 74 LLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQ 133
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMG 134
CSSGLQAVADVA AIKAG YDIGI AG+ESMT N ++ G VNP+VE F+QA+DCLLPMG
Sbjct: 134 CSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMG 193
Query: 135 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 194
ITSENVA+RFGVTR+EQD AAVESHR+AAAATASGKFKDEI+PV+TKIVDPKTG EK +
Sbjct: 194 ITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIV 253
Query: 195 ISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 254
ISVDDGIRPNTT+ADLAKLKP FKK+GTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLPIL
Sbjct: 254 ISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPIL 313
Query: 255 GVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL 314
GVFRSF+AVGVDP+VMGIGPAVAIPAAVK+AGL++DDI+LFEINEAFASQ+VYC KKLGL
Sbjct: 314 GVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGL 373
Query: 315 DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 374
DPEKVNVNGGA+ALGHPLGATGARCVATLL EMKRRGKDCRFGV+SMCIG+GMGAAAVFE
Sbjct: 374 DPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFE 433
Query: 375 RGDCVDELCNARMVPTHTH 393
RGD VDEL NAR V +
Sbjct: 434 RGDSVDELSNARKVEGNNL 452
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 480 bits (1238), Expect = e-170
Identities = 189/366 (51%), Positives = 248/366 (67%), Gaps = 19/366 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A++E+ L+P EV D+++G VL G + R AA AG PE+VP TVNR C SGL
Sbjct: 30 IKALLERAGLDPEEVDDVIMGNVLQAGEGQNP-ARQAALLAGLPESVPATTVNRVCGSGL 88
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISV----------VGQVNPKVEIFTQARDC 129
QAVA A +I AG D+ +A G+ESM+ + + ++ ++
Sbjct: 89 QAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFT 148
Query: 130 LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV 189
L MGIT+ENVA+++G++R+EQD A+ SH+RAAAA +G+FKDEI+PV G
Sbjct: 149 GLSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVP------GR 202
Query: 190 EKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 249
+ V + D+G RP+TT+ LAKLKPAFKKDGT TAGNAS ++DGA AVLLM A +
Sbjct: 203 KGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAKEL 262
Query: 250 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 309
GL L ++ GVDP++MGIGP AIP A+K AGL +DDI+L EINEAFA+Q + C+
Sbjct: 263 GLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACL 322
Query: 310 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 369
K+LGLDPEKVNVNGGA+ALGHPLGA+GAR V TLL E+KRRG R+G+ +MCIG G GA
Sbjct: 323 KELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGG--RYGLATMCIGGGQGA 380
Query: 370 AAVFER 375
A V ER
Sbjct: 381 AMVIER 386
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 444 bits (1144), Expect = e-156
Identities = 182/367 (49%), Positives = 237/367 (64%), Gaps = 21/367 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++ ++E+ L+P + D++ G VL G R AA AG PE+VP TVNRQC+SGL
Sbjct: 29 IKELLERNPLDPELIDDVIFGNVLQAGEQ-QNIARQAALLAGLPESVPAYTVNRQCASGL 87
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISV----VGQVNPKVEIFTQARDCL----- 130
QAV A I+AG D+ +A G+ESM+ SV V P
Sbjct: 88 QAVILAAQLIRAGEADVVVAGGVESMSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDP 147
Query: 131 ---LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKT 187
L MG+T+EN+A+++G++R+EQD A+ SH+RAA A G FKDEI+PV + K
Sbjct: 148 LNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPV--SVKGRKG 205
Query: 188 GVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 247
V +S D+GIRPNTT+ LAKLKPAF +GT TAGN+S ++DGA A+LLM A
Sbjct: 206 PV----VVSSDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAK 261
Query: 248 QKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 307
+ GL L S++ GVDP +MG+GP AIP A+K AGL I DI+LFEINEAFA+Q +
Sbjct: 262 ELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLA 321
Query: 308 CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGM 367
CIK+LGLD EKVNVNGGA+ALGHPLGA+GAR V TLL E+KRRG R+G+ ++CIG G
Sbjct: 322 CIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGG--RYGLATICIGGGQ 379
Query: 368 GAAAVFE 374
G A + E
Sbjct: 380 GIAVILE 386
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 401 bits (1034), Expect = e-139
Identities = 174/367 (47%), Positives = 237/367 (64%), Gaps = 19/367 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A +E+ + P +V ++++G VL G+ + R AA AG P VP T+N+ C SGL
Sbjct: 34 IKAALERAGVPPEQVDEVIMGQVLQAGAGQ-NPARQAALKAGLPVEVPALTINKVCGSGL 92
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMT----VNSISVVGQVNPKVEIF-TQARDCL---- 130
+AVA A AI+AG DI +A G ESM+ V S GQ VE+ T D L
Sbjct: 93 KAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAF 152
Query: 131 --LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTG 188
MGIT+EN+A+++G+TR+EQD A+ S ++A AA +G+FKDEI+PV K
Sbjct: 153 NGYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIK-----QR 207
Query: 189 VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 248
V + D+ RP+TT LAKL+PAF KDGT TAGNAS ++DGA AV++M + A +
Sbjct: 208 KGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKE 267
Query: 249 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYC 308
GL L S++ GVDP++MGIGP AI A++ AG + D++L EINEAFA+Q +
Sbjct: 268 LGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAV 327
Query: 309 IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 368
K+LGLDPEKVNVNGGA+ALGHP+GA+GAR + TLL EMKRRG + G+ ++CIG G G
Sbjct: 328 EKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGA--KKGLATLCIGGGQG 385
Query: 369 AAAVFER 375
A + ER
Sbjct: 386 VALIVER 392
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 382 bits (982), Expect = e-131
Identities = 172/349 (49%), Positives = 231/349 (66%), Gaps = 10/349 (2%)
Query: 32 SEVGDIVVGTVLAPGSTRAME-CRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 90
+ D+++G + P + + + R AG P TVP T+NR CSSGLQ++A A I
Sbjct: 47 GPIDDLIIGCAM-PEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIM 105
Query: 91 AGLYDIGIAAGLESMTVNSISVVGQV-NPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ 149
G + IA G ESM++ + ++G V P + A + + MG T+E VA ++G++R+
Sbjct: 106 LGHSEAVIAGGAESMSL--VPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISRE 163
Query: 150 EQDLAAVESHRRAAAATASGKFKDEIIPVN---TKIVDPKTGVEKRVTISVDDGIRPNTT 206
+QD AV SH+RAA A A GKF DEI+PV+ + + E+ +T S D+G+R +TT
Sbjct: 164 DQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTT 223
Query: 207 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 266
+ L KL+PAF G+ TAGN+SQ+SDGA AVLLM R A GL L FRSF+ GV
Sbjct: 224 LEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVP 283
Query: 267 PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAV 326
P VMGIGP AIP A+K AGL++ DI LFE+NEAFASQ + I++LGLD EKVNVNGGA+
Sbjct: 284 PEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAI 343
Query: 327 ALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
ALGHPLG TGA+ +L+ EMKRR + +FG+++MCIG GMGAA VFE
Sbjct: 344 ALGHPLGCTGAKLTLSLIHEMKRRNE--QFGIVTMCIGGGMGAAGVFEL 390
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 360 bits (927), Expect = e-123
Identities = 164/358 (45%), Positives = 229/358 (63%), Gaps = 19/358 (5%)
Query: 29 LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA 88
L+P + D +VG + R+ A AG P +V TVNR C+SGLQAVA A
Sbjct: 49 LDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADR 108
Query: 89 IKAGLYDIGIAAGLESMTV-----NSISVVGQVNPKVEIFTQARDCLLP--MGITSENVA 141
I+ G D+ IAAG+ESM++ N S+ +P IF + + + MG+T+E VA
Sbjct: 109 IRVGEADVMIAAGVESMSMVPMMGNKPSM----SP--AIFARDENVGIAYGMGLTAEKVA 162
Query: 142 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP--VNTKIVDPKTG--VEKRVTISV 197
+++ V+R++QD A+ESH++A AA +G+FKDEI P + + D TG K T+ +
Sbjct: 163 EQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDL 222
Query: 198 DDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 257
D+G R +T++ LAKLKP F G+ TAGN+SQ SDGAGAV+L+ Q L L F
Sbjct: 223 DEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARF 282
Query: 258 RSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE 317
SF+ GV P +MGIGP AIPAA+K AGL+ DD++ E+NEAFA+Q + I+ LGLDP
Sbjct: 283 VSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPS 342
Query: 318 KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
KVN GGA+ALGHPLGATGA AT++ ++R ++G+++MC+G+GMGAA +FER
Sbjct: 343 KVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 331 bits (850), Expect = e-111
Identities = 168/371 (45%), Positives = 232/371 (62%), Gaps = 31/371 (8%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
VQ +E+ +L+P+EV D+++G G+T A R A AG P TVP TVNR CSSGL
Sbjct: 35 VQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGL 94
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ------------VNPKVEIFTQAR 127
Q +A A + AG D+ +A G+ES IS V V K EI+
Sbjct: 95 QTIALAAQRVIAGEGDVFVAGGVES-----ISCVQNEMNRHMLREGWLVEHKPEIY---- 145
Query: 128 DCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP--VNTKIVDP 185
M T+ENVA+R+G++++ QD V+S +RAAAA A+G+F DEI+P V + D
Sbjct: 146 ---WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADK 202
Query: 186 KTG--VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKR 243
TG K VT+S D+GIRP+TT+ ++K++ A G TAGNASQ SDGA A ++M
Sbjct: 203 ATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALP-GGVITAGNASQFSDGASACVVMNA 261
Query: 244 SLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 303
+A ++GL LG+FR F+ G +P MGIGP A+P +K AGL++DDI+L+E+NEAFA
Sbjct: 262 KVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAV 321
Query: 304 QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCI 363
Q +YC LG+ +++NVNGGA+A+GHP G +GAR L E KRRG ++ V++MCI
Sbjct: 322 QVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRG--AKYVVVTMCI 379
Query: 364 GSGMGAAAVFE 374
G G GAA +FE
Sbjct: 380 GGGQGAAGLFE 390
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 326 bits (837), Expect = e-109
Identities = 155/367 (42%), Positives = 215/367 (58%), Gaps = 19/367 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
V+ + + ++P +VG +V G V+ R+AA AG P+ P VNR C SGL
Sbjct: 35 VREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGL 94
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLL-------- 131
QA+ A AI G D+ I G ESM+ + + D ++
Sbjct: 95 QAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFG 154
Query: 132 --PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV 189
MG+T+ENVA ++G++R+ QD A+ESHRRAAAA A+G FKD+I+PV K + G
Sbjct: 155 TIHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE 211
Query: 190 EKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQ 248
V D+ +R +TT+ DLAKLKP FKK+ GT TAGNAS ++DGA AV+L + A
Sbjct: 212 ---VVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEA 268
Query: 249 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYC 308
+GL L ++ GVDP MGIGP A A++ AGL + D+++ E NEAFA+Q
Sbjct: 269 RGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQACAV 328
Query: 309 IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 368
++LGLDP KVN NG ++LGHP+GATGA L E++R G R+ +++MCIG G G
Sbjct: 329 TRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGG--RYALVTMCIGGGQG 386
Query: 369 AAAVFER 375
AA+FER
Sbjct: 387 IAAIFER 393
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 316 bits (811), Expect = e-105
Identities = 162/354 (45%), Positives = 213/354 (60%), Gaps = 19/354 (5%)
Query: 29 LNPSEVGDIVVGTV---LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV 85
L+P+E+ DI+ G V L G A R AA AG P +VP TVNR C S +QA+ D
Sbjct: 45 LDPAEIDDIIWGCVQQTLEQGFNIA---RNAALLAGIPHSVPAVTVNRLCGSSMQALHDA 101
Query: 86 ATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 145
A AI G D+ + G+E M + + V+ + MG+T+E + + G
Sbjct: 102 ARAIMTGDGDVFLIGGVEHM--GHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHG 159
Query: 146 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNT 205
++R++QD A SH+RA AAT G+FK+EIIP D GV K D+ IRP T
Sbjct: 160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDAD---GVLKLFDY--DEVIRPET 214
Query: 206 TIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG 264
T+ LA L+PAF +GT TAG +S +SDGA A+L+M S A + GL RS + G
Sbjct: 215 TVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAG 274
Query: 265 VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNV 321
DPS+MG GP A A+K AGL I DI++FE+NEAFA+Q + C+K LGL EKVN+
Sbjct: 275 CDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNL 334
Query: 322 NGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
NGGA+ALGHPLG +GAR TLL+ M+R KD +FG+ +MCIG G G A VFER
Sbjct: 335 NGGAIALGHPLGCSGARISTTLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 309 bits (794), Expect = e-103
Identities = 152/362 (41%), Positives = 213/362 (58%), Gaps = 14/362 (3%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+ +IEKT + P E+ DI+ G L G R F A P +P V+RQC+S L
Sbjct: 40 INRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSL 99
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQAR------DCLLPM 133
V+ A I G+ DI IA G+E MT + + P ++ T + M
Sbjct: 100 TTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVM 159
Query: 134 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRV 193
G+T+E +A+ G+ R+E D ++ SH+ AA A G FKDEI+P+ ++ K+
Sbjct: 160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEG------KKK 213
Query: 194 TISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPI 253
+ VD +RP+T++ LAKL PAFK DG TAGN+S ++ GA VLLM + + GL
Sbjct: 214 VVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKP 273
Query: 254 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG 313
+ RSF GV P++MG GP A A++ AGL + DI+L+EINEAFA +Y IK+LG
Sbjct: 274 MAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELG 333
Query: 314 LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 373
LDPE VN+ GGA+A+GHPLGATGAR V TL +++ +GKD +GV ++C+G G G A V
Sbjct: 334 LDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKD--YGVATLCVGGGQGGAVVL 391
Query: 374 ER 375
ER
Sbjct: 392 ER 393
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 298 bits (766), Expect = 2e-98
Identities = 155/391 (39%), Positives = 221/391 (56%), Gaps = 57/391 (14%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A++E+T ++P+ + D++ G G A+ R+AA AG P TVP ++R+C SGL
Sbjct: 34 IRALVERTGIDPARIDDVIFGQGYPNGEAPAIG-RVAALDAGLPVTVPGMQLDRRCGSGL 92
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFT------------QAR 127
QAV A ++ G D+ IA G ESM+ VE +T Q
Sbjct: 93 QAVITAAMQVQTGAADVVIAGGAESMS------------NVEFYTTDMRWGVRGGGVQLH 140
Query: 128 DCL-------------LPMGI--TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFK 172
D L +P G+ T+EN+ + +G++R+EQD AV SH+RA AA +G+F
Sbjct: 141 DRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFD 200
Query: 173 DEIIPVN--TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP---AFKKDGTTTAGN 227
DEI+PV + DP + D+ R +TT+ LAKL+P + T TAGN
Sbjct: 201 DEIVPVTVPQRKGDP-------TVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGN 253
Query: 228 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 287
AS +D A A L+ A + GL L S++ GV+PS MGIGP A A+ AGL
Sbjct: 254 ASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGL 313
Query: 288 QIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLL 344
+DDI+L E+NEAFA+Q + +K+ G D E++NVNG ++LGHP+GATG R +ATLL
Sbjct: 314 TLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLL 373
Query: 345 SEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
E++RR R+G+ +MCIG G G AAVFER
Sbjct: 374 RELQRR--QARYGLETMCIGGGQGLAAVFER 402
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 293 bits (753), Expect = 1e-96
Identities = 147/371 (39%), Positives = 208/371 (56%), Gaps = 29/371 (7%)
Query: 20 VQAVIEKTR--LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSS 77
+ A +E+ ++ ++V D+++G VL G R AA AG P +VP TVNR C+S
Sbjct: 35 IDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACAS 94
Query: 78 GLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ------VNPKVEIFTQARDCLL 131
GL AV A AI +G D+ +A G+E M+ + G V+P E
Sbjct: 95 GLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGY 154
Query: 132 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK 191
MG+T+E A+R+G++R++QD AV+SH+ AAA +G F DEI P + V
Sbjct: 155 LMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPED---------VLN 204
Query: 192 RVTISVDDGIRPN--TTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 248
+ D R + T A L PAF++ GT TAGNAS ++DGA A+LLM S A +
Sbjct: 205 SP-VVADPLRRLDCSPTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKE 263
Query: 249 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQ-IDDINLFEINEAFASQYVY 307
GL L R+++ GVDPS+M GP A+ A+ AGL ++D+ L E EAFA+ +
Sbjct: 264 LGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALG 322
Query: 308 CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGK--DCRFGVISMCIG- 364
K LG P VN +GGA+ALGHP+GATGAR + L +++ RG+ R G+ ++CIG
Sbjct: 323 VTKILGDLP--VNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGG 380
Query: 365 SGMGAAAVFER 375
G G AAV ER
Sbjct: 381 GGQGVAAVLER 391
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 286 bits (733), Expect = 8e-94
Identities = 151/368 (41%), Positives = 225/368 (61%), Gaps = 19/368 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++ ++E+T L+P++V ++++G VL G+ + R AA AG P +VP T+N+ C SGL
Sbjct: 34 IRRLLEQTGLDPAQVDEVILGQVLTAGAGQN-PARQAAIKAGLPHSVPAMTLNKVCGSGL 92
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLP------- 132
+A+ A AI+ G ++ IA G E+M++ + G Q D ++
Sbjct: 93 KALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAF 152
Query: 133 ----MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTG 188
MGIT+EN+ +++G++R+ QD A S ++A AA +G+F DEI P+ ++ + G
Sbjct: 153 NDYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPI---LIPQRKG 209
Query: 189 VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 248
+ + + D+ R TT LAKLKPAFKKDG+ TAGNAS ++DGA AVLLM + A
Sbjct: 210 --EPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKA 267
Query: 249 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYC 308
GLP+L +++ GVDP++MGIGP A + AG + +++L E NEAFA+Q +
Sbjct: 268 LGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAV 327
Query: 309 IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 368
K+LG D KVNVNGGA+ALGHP+GA+G R + TLL EM RR D + G+ ++CIG G G
Sbjct: 328 GKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR--DAKKGLATLCIGGGQG 385
Query: 369 AAAVFERG 376
A ER
Sbjct: 386 VALAIERD 393
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 286 bits (734), Expect = 1e-93
Identities = 154/379 (40%), Positives = 218/379 (57%), Gaps = 35/379 (9%)
Query: 20 VQAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
++A++ + +L+ + + D++ G G RMAA AG P +VP TVNR C SG
Sbjct: 33 IKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSG 92
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------------------VNP 118
L A+ A AIKAG D+ IA G+ESM+ + V+G+ +NP
Sbjct: 93 LDAIGMAARAIKAGEADLLIAGGVESMS-RAPFVMGKADSAFSRSAKIEDTTIGWRFINP 151
Query: 119 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 178
+ +A + M T+ENVA+ FG++R++QD A+ S +R AAA ASG F +EI+PV
Sbjct: 152 LM----KALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPV 207
Query: 179 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 238
++ K G + D+ RP TT+ LAKLKP + DGT TAGNAS V+DGA A+
Sbjct: 208 ---VIPQKKGEP--TVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAAL 262
Query: 239 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 298
LL + GL + + GV+P +MGIGP A + AGL ID ++ E+N
Sbjct: 263 LLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFDVIELN 322
Query: 299 EAFASQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRF 356
EAFA+Q + +++LGL D +VN NGGA+ALGHPLGA+GAR V T L +++R G R+
Sbjct: 323 EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGG--RY 380
Query: 357 GVISMCIGSGMGAAAVFER 375
+ +MCIG G G A ER
Sbjct: 381 ALCTMCIGVGQGIALAIER 399
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 282 bits (724), Expect = 3e-92
Identities = 154/383 (40%), Positives = 218/383 (56%), Gaps = 43/383 (11%)
Query: 20 VQAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
++A++ + ++ V D++ G G RM+A AG P +VP T+NR C SG
Sbjct: 34 LKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSG 93
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------------------VNP 118
+ AV A AIKAG ++ IA G+ESM+ + V+G+ VNP
Sbjct: 94 MDAVGTAARAIKAGEAELMIAGGVESMS-RAPFVMGKADSAFSRQAEIFDTTIGWRFVNP 152
Query: 119 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 178
+ +A+ + M T+ENVA+ + ++R +QD A+ S +RAAAA A+G +EI+PV
Sbjct: 153 LM----KAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPV 208
Query: 179 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 238
I K V + D+ RP TT+ LAKLKP F+ DGT TAGNAS V+DGA A+
Sbjct: 209 --TIPQKKGDP---VVVDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAAL 263
Query: 239 LLMKRSLAVQKGLP----ILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 294
LL + A + GL ILG + GV+P +MGIGPA A + GL ID ++
Sbjct: 264 LLASEAAAKKHGLTPRARILG----MATAGVEPRIMGIGPAPATRKLLARLGLTIDQFDV 319
Query: 295 FEINEAFASQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGK 352
E+NEAFA+Q + +++LGL D +VN NGGA+ALGHPLG +GAR V T L +++R G
Sbjct: 320 IELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGG 379
Query: 353 DCRFGVISMCIGSGMGAAAVFER 375
R+ + +MCIG G G A ER
Sbjct: 380 --RYALCTMCIGVGQGIALAIER 400
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 277 bits (711), Expect = 1e-90
Identities = 159/355 (44%), Positives = 208/355 (58%), Gaps = 19/355 (5%)
Query: 28 RLNPSEVGDIVVGTV---LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD 84
+++P+EV DI G V L G A R AA A P T TVNR C S +QA+ D
Sbjct: 42 KVDPAEVEDIYWGCVQQTLEQGFNIA---RNAALLAQIPHTSAAVTVNRLCGSSMQALHD 98
Query: 85 VATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 144
A AI G D+ + G+E M + ++ V+ + MG+T+E + +
Sbjct: 99 AARAIMTGDADVCLVGGVEHM--GHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMH 156
Query: 145 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN 204
G++R++QD A SH RA AAT GKFK+EIIP D G K D+ IRP
Sbjct: 157 GISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPE 211
Query: 205 TTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAV 263
TT+ LA L+PAF K+GT TAG +S +SDGA A+L+M A + GL RS +
Sbjct: 212 TTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVA 271
Query: 264 GVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVN 320
G DPS+MG GP A A+K AGL I DI++FE+NEAFA+Q + C+K LGL EKVN
Sbjct: 272 GCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVN 331
Query: 321 VNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
+NGGA+ALGHPLG +GAR TLL+ M++ KD FG+ +MCIG G G A VFER
Sbjct: 332 LNGGAIALGHPLGCSGARISTTLLNLMEQ--KDATFGLATMCIGLGQGIATVFER 384
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 275 bits (705), Expect = 2e-89
Identities = 140/367 (38%), Positives = 212/367 (57%), Gaps = 21/367 (5%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++ +E+ ++ +V ++++GTVL G + + R AA AG P V TVN+ C+SGL
Sbjct: 34 IKEALERANVSAEDVEEVIMGTVLQGGQGQ-IPSRQAARAAGIPWEVQTETVNKVCASGL 92
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI-FTQARDCLL------- 131
+AV I+AG + +A G+ESM+ N+ ++ + + D ++
Sbjct: 93 RAVTLADQIIRAGDASVIVAGGMESMS-NAPYILPGARWGYRMGDNEVIDLMVADGLTCA 151
Query: 132 ----PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKT 187
MG+ VA+ G++R+ QD A SH+RA +A G+F++EI+PV + +
Sbjct: 152 FSGVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVT---IPQRK 208
Query: 188 GVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 247
G + ++ D+ R +TTI LAKLKP F K GT TAGNA V+DGA A++LM A
Sbjct: 209 G--DPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAK 266
Query: 248 QKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 307
Q+G L + +A+ V+ P AI A ++ G ++DI+LFEINEAFA+ +
Sbjct: 267 QEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALA 326
Query: 308 CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGM 367
+ G+DPEKVNVNGGAVALGHP+GA+GAR + TL+ E+KRRG G+ ++C G G
Sbjct: 327 STEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGG--IGIAAICSGGGQ 384
Query: 368 GAAAVFE 374
G A + E
Sbjct: 385 GDAVLIE 391
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 274 bits (704), Expect = 3e-89
Identities = 146/385 (37%), Positives = 213/385 (55%), Gaps = 48/385 (12%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A+ ++ L+ + V D+V+G V G A R A AG PETVP +NR C+SGL
Sbjct: 36 LEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGL 95
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------VNPKVEIFTQARDCLL 131
+AV A +++G D+ IA G+ESM S V ++P T +
Sbjct: 96 EAVNLAAAKVRSGWDDLVIAGGVESM-----SRVPMGSDGGAWAMDPSTNFPTY----FV 146
Query: 132 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK 191
P GI+++ +A ++G +R++ D AVES +RAAAA A G F ++PV K + T ++
Sbjct: 147 PQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPV--KDQNGLTILDH 204
Query: 192 RVTISVDDGIRPNTTIADLAKLKPAFKKDGTT---------------------TAGNASQ 230
D+ +RP TT+ LAKLKP+F G AGN+S
Sbjct: 205 ------DEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSG 258
Query: 231 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID 290
+ DGA AVL+ GL + + +G DP++M GP A A+ AGL +D
Sbjct: 259 IVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVD 318
Query: 291 DINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 350
DI+LFE+NEAFAS + ++ L + +KVNVNGGA+A+GHPLGATGA + T+L E++RR
Sbjct: 319 DIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR 378
Query: 351 GKDCRFGVISMCIGSGMGAAAVFER 375
GK R +I++C+G GMG A + ER
Sbjct: 379 GK--RTALITLCVGGGMGIATIIER 401
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 272 bits (698), Expect = 3e-88
Identities = 157/382 (41%), Positives = 216/382 (56%), Gaps = 38/382 (9%)
Query: 20 VQAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
V+A ++K L+P+++ D+++G L G R+ A G+ +P TVNR CSS
Sbjct: 35 VRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNRYCSSS 93
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTV----NSISVVGQVNPK--------------- 119
LQ AIKAG D+ I+AG+E+++ NS S+ NP
Sbjct: 94 LQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGG 153
Query: 120 VEIFTQAR-DCLLP-----MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKD 173
E + R D LLP MG T+ENVAQ G++R+EQD V S RA A A+G F+
Sbjct: 154 AEAWHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFER 213
Query: 174 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 233
EI PV P V +S DDG R TT +++LKP F+ DGT TAGNA ++D
Sbjct: 214 EITPVTL----PDGTV-----VSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLND 264
Query: 234 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 293
GA AV++M + A + GL L S G+ P +MG+GP A A+ AG+ IDDI+
Sbjct: 265 GAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDID 324
Query: 294 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKD 353
L EINEAFA+Q + ++LG+D +K+NV+GGA+ALGHP G TGAR TLL+ ++ K
Sbjct: 325 LVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDK- 383
Query: 354 CRFGVISMCIGSGMGAAAVFER 375
FG+ +MC+G G G A V ER
Sbjct: 384 -TFGLETMCVGGGQGMAMVLER 404
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 263 bits (674), Expect = 6e-85
Identities = 135/371 (36%), Positives = 213/371 (57%), Gaps = 22/371 (5%)
Query: 18 FSVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSS 77
++QA +E+ ++P+ V ++ G VL+ +A R AA AG P + TVN+ C+S
Sbjct: 31 IAIQAALERAGVDPALVQEVFFGNVLSANLGQA-PARQAALGAGLPPSTICTTVNKVCAS 89
Query: 78 GLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI-FTQARDCLL----- 131
G++AV A +I+ G+ D+ +A G+ESM+ N+ + + + D +L
Sbjct: 90 GMKAVMLAAQSIQLGINDVVVAGGMESMS-NAPKYLPEARKGSRLGHDTVVDGMLKDGLW 148
Query: 132 ------PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDP 185
MG+ +E A ++ ++R+EQD A++S+ RA AA +G F EI+PV P
Sbjct: 149 DVYNDFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEV----P 204
Query: 186 KTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRS 244
V + D+G+ A L KL+P+FK+D G+ TAGNAS +SDGA A++L+
Sbjct: 205 GGRGRPSVIVDKDEGLG-KFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGE 263
Query: 245 LAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ 304
A++ GL ++ R ++ P + PA+AIP A+K AGL+ ++ +EINEAF+
Sbjct: 264 KALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVV 323
Query: 305 YVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIG 364
+ K LGLDPEKVNV+GGAV+LGHP+G +GAR + TLL ++ + ++GV +C G
Sbjct: 324 ALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNG 381
Query: 365 SGMGAAAVFER 375
G +A V E
Sbjct: 382 GGGASAIVVEL 392
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 259 bits (663), Expect = 3e-83
Identities = 150/375 (40%), Positives = 214/375 (57%), Gaps = 28/375 (7%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++ ++EK+ ++ D+++G G R A AG P TVP +TVNR C+SGL
Sbjct: 34 IRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGL 93
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSI-----------------SVVGQVNPKVEI 122
AV D A AI G D+ +A G+ESM+ + +G P +I
Sbjct: 94 AAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKI 153
Query: 123 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 182
Q + +P T +NVA FG++R++ D A +S + AA G F DEI P+ ++
Sbjct: 154 VAQYGNDSMPE--TGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPI--EV 209
Query: 183 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 242
+ K V D+ RP++T+ L KLKP F+ G TAGNAS ++DGA A+L+
Sbjct: 210 PQGRKLPPKLVA--EDEHPRPSSTVEALTKLKPLFE-GGVVTAGNASGINDGAAALLIGS 266
Query: 243 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 302
R+ + GL + S +A GV+P +MGIGP AI A+ AGL +DD+++ EINEAFA
Sbjct: 267 RAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFA 326
Query: 303 SQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 360
SQ + C+K LG+ D +VN NGGA+A+GHPLGA+GAR T E++RRGK R+ V+S
Sbjct: 327 SQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGK--RYAVVS 384
Query: 361 MCIGSGMGAAAVFER 375
+CIG G G A V ER
Sbjct: 385 LCIGVGQGLAMVIER 399
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 258 bits (660), Expect = 1e-82
Identities = 146/379 (38%), Positives = 207/379 (54%), Gaps = 36/379 (9%)
Query: 20 VQAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
++A++E+ ++ + + D++ G G RM+ AG P VP T+NR C SG
Sbjct: 34 LKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSG 93
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------------------VNP 118
+ AV A AIK+G + IA G+ESM+ + V+G+ VNP
Sbjct: 94 MDAVGVAARAIKSGEAALMIAGGVESMS-RAPFVMGKAESAFSRQAEIFDTTIGWRFVNP 152
Query: 119 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 178
+ + + M T+ENVA + V+R +QD A+ S ++AA A A G EI+PV
Sbjct: 153 LM----KQLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPV 208
Query: 179 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 238
+ K G V+ D+ R TT+ LAKLK + DGT TAGNAS V+DGA A+
Sbjct: 209 T---IPQKKGDPLVVS--RDEHPRE-TTLEALAKLKGVVRPDGTVTAGNASGVNDGACAL 262
Query: 239 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 298
LL + A + GL + GV+P VMGIGPA A + G+ +D ++ E+N
Sbjct: 263 LLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDVIELN 322
Query: 299 EAFASQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRF 356
EAFASQ + +++LGL D +VN NGGA+ALGHPLGA+GAR V T L +++R G RF
Sbjct: 323 EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGG--RF 380
Query: 357 GVISMCIGSGMGAAAVFER 375
+ +MCIG G G A ER
Sbjct: 381 ALCTMCIGVGQGIAIAIER 399
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 251 bits (642), Expect = 8e-82
Identities = 104/237 (43%), Positives = 149/237 (62%), Gaps = 18/237 (7%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A +E+ + P +V ++++G VL G R AA AG P++VP T+N+ C SGL
Sbjct: 32 IKAALERAGVKPEDVDEVIMGNVLQAGEG-QNPARQAALKAGIPDSVPAVTINKVCGSGL 90
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARD------ 128
+AVA A AI+AG DI +A G+ESM+ + + V ++ + T +D
Sbjct: 91 KAVALAAQAIRAGDADIVVAGGVESMSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAF 150
Query: 129 CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTG 188
L+ MGIT+ENVA+++G++R+EQD A+ S ++AAAA +GKFKDEI+PV K
Sbjct: 151 NLIHMGITAENVAKKYGISREEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRK---- 206
Query: 189 VEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRS 244
K + + D+GIRP TT+ LAKLKPAF K+ GT TAGNAS ++DGA AVLLM S
Sbjct: 207 -GKPLVVDKDEGIRPGTTLESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMSES 262
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 253 bits (646), Expect = 7e-81
Identities = 135/372 (36%), Positives = 226/372 (60%), Gaps = 33/372 (8%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++ +++ ++++P+ V ++++G V+ GS + R +AG P+ VP T+N+ C SGL
Sbjct: 35 IKDILQNSKIDPALVNEVILGQVITGGSGQN-PARQTLIHAGIPKEVPGYTINKVCGSGL 93
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTV-------------NSISVVG--QVNPKVEIFT 124
++VA A +I G +I IA G E+M++ I +V Q + ++F+
Sbjct: 94 KSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFS 153
Query: 125 QARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVD 184
+ MGIT+EN++++F ++RQEQD A+ SH++AA A +G FKDEI+P+ I
Sbjct: 154 G-----VFMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTI-- 206
Query: 185 PKTGVEKRVT--ISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 242
K+ T D+ +RP+T++ L+KL+PAF K+G TAGNAS ++DGA ++++
Sbjct: 207 ------KKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGNASSINDGAACLMVVS 260
Query: 243 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 302
+ L L S+++ GVDPS+MG P A A+ AG ++D+ + E+NEAFA
Sbjct: 261 EEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFA 320
Query: 303 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 362
+Q +Y +++ D EKVN+NGGA+A+GHP+GA+G R + TL+ ++R + G++++C
Sbjct: 321 AQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRR--AKAKKGLVTLC 378
Query: 363 IGSGMGAAAVFE 374
IG GMG A E
Sbjct: 379 IGGGMGMAMCVE 390
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 252 bits (647), Expect = 2e-80
Identities = 146/410 (35%), Positives = 215/410 (52%), Gaps = 73/410 (17%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVL----APGSTRAMECRMAAFYAGFPETVPLRTVNRQC 75
V ++ ++ ++P + +V G V+ AP R + G +V+R C
Sbjct: 37 VGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREI-----VLGTGMNVHTDAYSVSRAC 91
Query: 76 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV----------------VGQVNPK 119
++ QAVA+VA +I AG DIGIA G +S +V I V +GQ +
Sbjct: 92 ATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQ---R 148
Query: 120 VEIFTQ--ARDCLLP-------------MGITSENVAQRFGVTRQEQDLAAVESHRRAAA 164
+++F++ RD LLP MG T+E +A+ +G++R+EQD A SH+ AA
Sbjct: 149 LKLFSRLRLRD-LLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQ 207
Query: 165 ATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTT 223
A A GK DE V T V P + + D+ IR ++T+ D AKL+PAF +K GT
Sbjct: 208 AWAEGKLDDE---VMTAHVPPY-----KQPLEEDNNIRGDSTLEDYAKLRPAFDRKHGTV 259
Query: 224 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAV 282
TA N++ ++DGA AVLLM S A GL LG RS++ +D M +GPA A P A+
Sbjct: 260 TAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLAL 319
Query: 283 KSAGLQIDDINLFEINEAFASQYVYCIK----------KLG-------LDPEKVNVNGGA 325
+ AGL + D+ L +++EAFA+Q + ++ KLG +D K NV GG+
Sbjct: 320 ERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGS 379
Query: 326 VALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
+A GHP ATGAR + L E++RRG G+ + C G+GAA V E
Sbjct: 380 IAYGHPFAATGARMITQTLHELRRRGGG--LGLTTACAAGGLGAAMVLEV 427
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 248 bits (635), Expect = 4e-79
Identities = 139/368 (37%), Positives = 202/368 (54%), Gaps = 28/368 (7%)
Query: 18 FSVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSS 77
++ ++++T ++P+ V D++ G V G R + AG PE VP TV+RQC S
Sbjct: 32 HVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDRQCGS 91
Query: 78 GLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS---VVGQVNPKVEIFTQARDCLLPMG 134
QA+ A A+ +G D+ +A G+++M+ IS G+ F +++ L G
Sbjct: 92 SQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYG 151
Query: 135 -------ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKT 187
+E +A+++G++R+E + A+ESHRRA AA +G+F +EI+PV
Sbjct: 152 DQEVSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVG-------- 203
Query: 188 GVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 247
GV VD+G R T++ +A LKP + G TA ASQ+SDGA AVLL
Sbjct: 204 GVT------VDEGPR-ETSLEKMAGLKP-LVEGGRLTAAVASQISDGASAVLLASERAVK 255
Query: 248 QKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 307
+ GL S G DP M P A A++ GL IDDI++ EINEAFA +
Sbjct: 256 RHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPVVLA 315
Query: 308 CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGM 367
+K+ G DP KVN NGGA+ALGHPLGATGA+ + TLL E++R G R+G+ +MC G G
Sbjct: 316 WLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGG--RYGLQTMCEGGGT 373
Query: 368 GAAAVFER 375
+ ER
Sbjct: 374 ANVTIIER 381
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 246 bits (630), Expect = 6e-78
Identities = 145/399 (36%), Positives = 210/399 (52%), Gaps = 69/399 (17%)
Query: 30 NPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 89
P ++ ++++G P A R+ A G E VP TV R C+SG+QA+ A I
Sbjct: 45 APDDLDEVILGCA-MPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANI 103
Query: 90 KAGLYDIGIAAGLESMT----------------VNSISVVGQVNPKVEIFTQARD----- 128
G D+ +A G+E+M+ + +GQ K+ + R
Sbjct: 104 ALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQ---KLAALGKLRPSYLAP 160
Query: 129 ------------CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEII 176
L MG T+E +A RFG+TR++ D A SH+R AAA A G+ K E++
Sbjct: 161 VIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVV 219
Query: 177 PVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGA 235
P + D DDG+RP++++ LAKLKP F + G TAGN+SQ++DGA
Sbjct: 220 P----LFDRDGKFYDH-----DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGA 270
Query: 236 GAVLLMKRSLAVQK-GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 294
LL+ AV+K GLP LG +DPS MG+GP A ++ GL ++D++L
Sbjct: 271 -CWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDL 329
Query: 295 FEINEAFASQYV----------YCIKKLGL-------DPEKVNVNGGAVALGHPLGATGA 337
+EINEAFA+Q + YC ++LGL D E++NV+GGA+ALGHP+GA+GA
Sbjct: 330 WEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389
Query: 338 RCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 376
R V LL +KRRG + G+ ++CIG G G A + ER
Sbjct: 390 RIVLHLLHALKRRGT--KRGIAAICIGGGQGGAMLLERV 426
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 242 bits (620), Expect = 7e-77
Identities = 136/364 (37%), Positives = 196/364 (53%), Gaps = 10/364 (2%)
Query: 16 LLFSVQ-AVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 74
LL +VQ AV+++ ++P +V ++ G V G R A +AG P V T++ Q
Sbjct: 29 LLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQ 88
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKV-EIFTQARDCLLPM 133
C S QA VA I AG D+GIA G+E+M+ + + P + D +P
Sbjct: 89 CGSAQQANHLVAGLIAAGAIDVGIACGVEAMS--RVPLGANAGPGRGLPRPDSWDIDMPN 146
Query: 134 GITS-ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDP-KTGVEK 191
+ E +A+R G+TR++ D + S RRAA A A G+F EI PV ++D +
Sbjct: 147 QFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGE 206
Query: 192 RVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 251
++ D G+R +TT+ LA LKP + G TAG +SQ+SDGA AVL M A GL
Sbjct: 207 TRLVTRDQGLR-DTTMEGLAGLKPVLE-GGIHTAGTSSQISDGAAAVLWMDEDRARALGL 264
Query: 252 PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK 311
+ + VG +P GP A ++ AG++I DI+L EINEAFAS + +
Sbjct: 265 RPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQV 324
Query: 312 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAA 371
D +KVNVNGGA+ALGHP+G+TGAR + T L E++R K +I+MC G +
Sbjct: 325 HEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDK--STALITMCAGGALSTGT 382
Query: 372 VFER 375
+ ER
Sbjct: 383 IIER 386
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 241 bits (618), Expect = 1e-76
Identities = 136/375 (36%), Positives = 213/375 (56%), Gaps = 42/375 (11%)
Query: 22 AVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQA 81
A+++++ +P+ + D+++G V G R A + PE+VP +++RQC S QA
Sbjct: 36 ALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQA 95
Query: 82 VADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV----------NPKVE------IFTQ 125
+ A A+ +G DI IAAG+ESMT + + +P +E F+Q
Sbjct: 96 LHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQ 155
Query: 126 ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDP 185
G +E +A+++G+++ + D A++SH+RA AAT +GKFK EI+P+ D
Sbjct: 156 F------TG--AEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADG 207
Query: 186 KTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 245
+ VD+GIR + T+ +A +K + G TA ASQ+ DGA V+++
Sbjct: 208 SGEMHT-----VDEGIRFDATLEGIAGVKL-IAEGGRLTAATASQICDGASGVMVVN--- 258
Query: 246 AVQKGLPILGV-----FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 300
++GL LGV + +G DP +M P A A+K AG++IDDI+L+E+NEA
Sbjct: 259 --ERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEA 316
Query: 301 FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 360
FAS + +K G DPE++NVNGGA+ALGHPLGA+G + + TL+ +K+RGK R+G+ +
Sbjct: 317 FASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGK--RYGLQT 374
Query: 361 MCIGSGMGAAAVFER 375
MC G GM + ER
Sbjct: 375 MCEGGGMANVTIVER 389
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 232 bits (593), Expect = 3e-73
Identities = 127/346 (36%), Positives = 193/346 (55%), Gaps = 30/346 (8%)
Query: 31 PSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 90
E+ D+++G V+ PG A R++A AG +P T++RQC +GL+A+ I+
Sbjct: 41 EREIDDVILGNVVGPGGNVA---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQ 97
Query: 91 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 150
G IA G+ES + + + +P+ I MG+ +E VA+R+ +TR+
Sbjct: 98 GGAGKCYIAGGVESTSTSPFQNRARFSPET-IGDPD------MGVAAEYVAERYNITREM 150
Query: 151 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 210
QD A S++R A G +EI+ N G+ D+ I+ +
Sbjct: 151 QDEYACLSYKRTLQALEKGYIHEEILSFN--------GLL-------DESIKKEMNYERI 195
Query: 211 -AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPS 268
+ KPAF +GT TAGN+ V+DGA AVL+M+ A + G P+L RS + VGVDP+
Sbjct: 196 IKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPN 254
Query: 269 VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVAL 328
+ G GP A+ + ++++DI+ FEINEAFAS+ V C K+L + EK+NVNGGA+AL
Sbjct: 255 LPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIAL 314
Query: 329 GHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 374
GHP GA+GA V L + KR D ++G+ ++ IG G+G A +FE
Sbjct: 315 GHPYGASGAMLVTRLFYQAKRE--DMKYGIATLGIGGGIGLALLFE 358
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 216 bits (551), Expect = 1e-66
Identities = 139/369 (37%), Positives = 191/369 (51%), Gaps = 24/369 (6%)
Query: 19 SVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
++ A +E+ L P ++ ++V+G VL G +A R AA AG P +V TVN+ C SG
Sbjct: 38 AIAAAVERAGLKPEQIDEVVMGCVLPAGQGQA-PARQAALGAGLPLSVGCTTVNKMCGSG 96
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----------GQVNPKVEI--FTQ 125
++A + AG D+ +A G+ESMT N+ ++ GQV + +
Sbjct: 97 MRAAMFAHDMLVAGSVDVIVAGGMESMT-NAPYLLPKARGGMRMGHGQVLDHMFLDGLED 155
Query: 126 ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDP 185
A D MG +E A +G TR+ QD A+ES RA A G F EI PV V
Sbjct: 156 AYDKGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVT---VAG 212
Query: 186 KTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 245
K G I D+ + LKPAF K GT TA N+S +SDGA A+++M+ S
Sbjct: 213 KKG---DTVIDRDEQPF-KANPEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRAST 268
Query: 246 AVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 305
A + GL L S PS P AI + G + +++LFEINEAFA
Sbjct: 269 AKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVT 328
Query: 306 VYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGS 365
+ +K+ GL EKVNVNGGA ALGHP+GA+GAR + TL+ ++ RG + GV S+CIG
Sbjct: 329 MAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGG--KRGVASLCIGG 386
Query: 366 GMGAAAVFE 374
G A E
Sbjct: 387 GEATAMGIE 395
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 213 bits (545), Expect = 2e-65
Identities = 131/390 (33%), Positives = 190/390 (48%), Gaps = 44/390 (11%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
++A+ E+ LN ++V DI+ T G RMAA AG+ T++R C G+
Sbjct: 37 LKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGI 96
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFT--------QARDCLL 131
+V A I +G+ D+ IA G E M+ + + +A
Sbjct: 97 TSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQS 156
Query: 132 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK 191
G+ + +A G+TR+ D +ES RRAA A G+F ++PV +
Sbjct: 157 HQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPV----YRD----DG 208
Query: 192 RVTISVDDGIRPNTTIADLAKLKPAFKK-------DGTTT-------------------A 225
V + ++ RP TT LA LKPAF D TT A
Sbjct: 209 SVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHA 268
Query: 226 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSA 285
GN+S V DGA A+LL ++ A + GL + + +G DP++M P A + A
Sbjct: 269 GNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKA 328
Query: 286 GLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLS 345
GL DDI+L+EINEAFA I+ L LD +KVNVNGGA+ALGHP+GATG+ + T+L
Sbjct: 329 GLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLD 388
Query: 346 EMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
E++RRG + G+++MC GM A + ER
Sbjct: 389 ELERRGL--KRGLVTMCAAGGMAPAIIIER 416
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 210 bits (536), Expect = 7e-64
Identities = 132/415 (31%), Positives = 196/415 (47%), Gaps = 77/415 (18%)
Query: 16 LLFSVQAVIEKTRLNPSEVGDIVVGTVLAPGS----TRAMECRMAAFYAGFPETVPLRTV 71
L ++ ++++ L +G++V G VL TR EC + + + P T P +
Sbjct: 35 LTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTR--ECVLGSALS--PYT-PAYDL 89
Query: 72 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM-----------------------TVN 108
+ C +GL+A VA I G D GIA G+++ T +
Sbjct: 90 QQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGD 149
Query: 109 SISVVGQVNPKVEIFTQARD----CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAA 164
+ +G++ PK R+ L MG + A+ +G++R+ QD A SH+ AA
Sbjct: 150 RLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAA 209
Query: 165 ATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 222
A G F D I P G+ + D+ +RP++++ LAKLKP F K T
Sbjct: 210 AYDRGFFDDLITPFL--------GLTR------DNNLRPDSSLEKLAKLKPVFGKGGRAT 255
Query: 223 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG-----IGPAVA 277
TAGN++ ++DGA VLL A + GLP+L VD V G + PA A
Sbjct: 256 MTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVD-FVHGKEGLLMAPAYA 314
Query: 278 IPAAVKSAGLQIDDINLFEINEAFASQYV----------YCIKKLGL-------DPEKVN 320
+P + GL + D + +EI+EAFASQ + YC ++LGL D K+N
Sbjct: 315 VPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLN 374
Query: 321 VNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 375
VNG ++A GHP ATG R VATL + +G R G+IS+C G G A+ ER
Sbjct: 375 VNGSSLAAGHPFAATGGRIVATLAKLLAEKGSG-R-GLISICAAGGQGVTAILER 427
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 194 bits (496), Expect = 8e-62
Identities = 77/125 (61%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
Query: 251 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIK 310
L L RS++ VGVDP++MGIGPA AIP A+K AGL ++DI+LFEINEAFA+Q + K
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 311 KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAA 370
LG+DPEKVNVNGGA+ALGHPLGA+GAR + TLL E+KRRG ++G+ ++CIG G G A
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG--KYGLATLCIGGGQGVA 118
Query: 371 AVFER 375
+ ER
Sbjct: 119 MIIER 123
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 201 bits (511), Expect = 9e-61
Identities = 122/371 (32%), Positives = 198/371 (53%), Gaps = 33/371 (8%)
Query: 19 SVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
+++AVI+ +L+P+ V ++++G V+ G + AA++AG P V TVN C+SG
Sbjct: 33 AIKAVIDDAKLDPALVQEVIMGNVIQAGVGQN-PAGQAAYHAGLPFGVTKYTVNVVCASG 91
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV--NPKVEIFTQAR--DCLLP-- 132
+ AV A I G D+ IA G+E+M+ + + PK + + D +L
Sbjct: 92 MLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDG 151
Query: 133 ---------MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV 183
MG+++E A+++G+TR+ D +V+S+ RA AT SG+F++EI+P N
Sbjct: 152 LIDAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--- 208
Query: 184 DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKR 243
+ D+GIR TT+ DLAKL PAF K+G TAGN++Q+SDG A+++
Sbjct: 209 -----------LDRDEGIR-KTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASE 256
Query: 244 SLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 303
+ GL + + + +DP P A ++ ID +L E NEAF+
Sbjct: 257 KAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSI 316
Query: 304 QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCI 363
+ +L +D E+ NVNGGAVA+GHP+G +G+R + TL++ +K R + G+ ++C
Sbjct: 317 ASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--HMKTGLATLCH 374
Query: 364 GSGMGAAAVFE 374
G G E
Sbjct: 375 GGGGAHTLTLE 385
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 201 bits (512), Expect = 2e-60
Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 67/406 (16%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVL----APGSTRAMECRMAAFYAGFPETVPLRTVNRQC 75
V ++ ++ ++P + +V G V+ AP R + G +V R C
Sbjct: 39 VSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREI-----VLGTGMNVHTDAYSVTRAC 93
Query: 76 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEI 122
++ Q+ +VA +I AG DIGIA G +S +V I V ++ K+++
Sbjct: 94 ATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKV 153
Query: 123 FTQ--ARDCL------------LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 168
F++ +D + L MG T+E +A+ +G+TR EQD A SH A+ A
Sbjct: 154 FSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRD 213
Query: 169 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGN 227
GK E++ T P + I+ D+ IR N+T+A AKL+PAF +K G+ TA N
Sbjct: 214 GKLAGEVM---TAFPPP-----YKQWIAEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAAN 265
Query: 228 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSA 285
++ ++DGA AV+LM+ A + G+ LG RS F+A+ V M +GP+ A P A++ A
Sbjct: 266 STPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVW-QDMLMGPSYATPLALQRA 324
Query: 286 GLQIDDINLFEINEAFASQYVYCIKKLG-----------------LDPEKVNVNGGAVAL 328
GL + D+ L +++EAFA+Q + ++ +D K NV GG++A
Sbjct: 325 GLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAY 384
Query: 329 GHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 374
GHP ATGAR + L E+KRRG G+ + C G+GAA + E
Sbjct: 385 GHPFAATGARMITQTLRELKRRGGG--LGLNTACAAGGLGAAMILE 428
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 174 bits (443), Expect = 9e-51
Identities = 111/389 (28%), Positives = 165/389 (42%), Gaps = 61/389 (15%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+ A +E + V + +G VL + AA +AG + P +N C SGL
Sbjct: 31 IAAALEPAGVAAGAVEEACLGQVL-GAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGL 89
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 139
+A+A I G + +A G E M ++ + + + V I
Sbjct: 90 RALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYG------------- 136
Query: 140 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD 199
R D A+ A AA G+FKDE K G + + D+
Sbjct: 137 -------MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVK------GRKGDIHSDADE 183
Query: 200 GIR--PNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPI---- 253
I+ ++ ++AKL+PAF K+ TAGNA ++DGA A +LM + A + GL
Sbjct: 184 YIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKARE 243
Query: 254 ---LGVFRSFSAVGVDPS----VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 306
L + ++ D V G GP A A++ AGL I D++L E ++AFA+
Sbjct: 244 IQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANAC 303
Query: 307 YCIKKLGLDPEK------------------VNVNGGAVALGHPLGATGARCVATLLSEMK 348
+ LGL PE +N NGGA+A+GHP+GA+GA A L E+K
Sbjct: 304 ATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELK 363
Query: 349 RRGKDC---RFGVISMCIGSGMGAAAVFE 374
G+ +CIG G GAA E
Sbjct: 364 GEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 81.7 bits (202), Expect = 1e-17
Identities = 42/160 (26%), Positives = 60/160 (37%), Gaps = 12/160 (7%)
Query: 225 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----VMGIGPAVAIPA 280
DGA A ++ A+++G S +A S V G G A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 281 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVN---VNGGAVALGHPLGATGA 337
A++ AGL DI+ E + LGLDP+ V V+ + GHPLGA G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 338 RCVATLLSEMKRRGKDC-----RFGVISMCIGSGMGAAAV 372
+ LL ++ R ++ G AA V
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253
Score = 39.7 bits (93), Expect = 0.001
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 19 SVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
+ + I L+ + ++VGT G + A++ G P +VN+ C++G
Sbjct: 14 AAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQ-LAYHLGISG-GPAYSVNQACATG 71
Query: 79 LQAVADVATAIKAGLYDIGIAAGLES 104
L A+A ++ G DI +A G E
Sbjct: 72 LTALALAVQQVQNGKADIVLAGGSEE 97
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 75.0 bits (185), Expect = 8e-15
Identities = 94/396 (23%), Positives = 144/396 (36%), Gaps = 88/396 (22%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+A ++ L P+++ +VVG G ++ + A Y G R V +SG
Sbjct: 24 ARAALDDAGLEPADIDAVVVGNAAG-GRFQSFPGALIAEYLGLLGKPATR-VEAAGASGS 81
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTV--NSISVVGQVNPKVEIFTQARDCLLPMGITS 137
AV A AI +GL D+ + G E M+ G+ + + L P + +
Sbjct: 82 AAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYA 141
Query: 138 ENVAQR----FGVTRQEQDLAAV-ESHRRAAAATASGKFKDEIIPV----NTKIVDPKTG 188
A+R +G TR +DLA V + R AA +F+ I + I DP
Sbjct: 142 -LAARRYMHRYGTTR--EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADP--- 195
Query: 189 VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 248
+ VSDGA AV+L A +
Sbjct: 196 ----------------------------------LRLLDCCPVSDGAAAVVLASEERARE 221
Query: 249 KGLP---ILGV-----FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 300
ILGV S S S+ +A A K AG+ DDI++ E+ +
Sbjct: 222 LTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDIDVAELYDC 279
Query: 301 FASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVAT 342
F + ++ LG + VN +GG ++ GHPLGATG
Sbjct: 280 FTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVE 339
Query: 343 LLSEMKRRG-----KDCRFGVISMCIGSGMGAAAVF 373
+ +++ R G+ IG G G+AAV
Sbjct: 340 AVRQLRGEAGARQVPGARVGLAHN-IG-GTGSAAVV 373
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 62.6 bits (152), Expect = 1e-10
Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 88/359 (24%)
Query: 19 SVQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMA---AFYAGFPETVPLRTVNRQC 75
S++ + ++ +++ +VVG+ + R +E A A Y+G VPLR V C
Sbjct: 28 SIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAEYSGLTGKVPLR-VEAMC 82
Query: 76 SSGLQAVADVATAIKAGLYDIGIAAGLESM----TVNSISVVGQVNPKVEIFTQARDCLL 131
++GL A TA+ +GL D+ IA G++ M T S+++ G+ +
Sbjct: 83 ATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHF------ 136
Query: 132 PMGIT---------SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 182
G T + ++A +G T ++ L +V++H+ A
Sbjct: 137 -YGTTFPTYYALYATRHMA-VYGTTEEQMALVSVKAHKYGA------------------- 175
Query: 183 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 242
++PK +K VT V++ ++ + I+ KL ++ +SDG+ +
Sbjct: 176 MNPKAHFQKPVT--VEEVLK-SRAISWPIKLL------------DSCPISDGSATAIFAS 220
Query: 243 ----RSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAV-AIPAAVKSAGLQIDDINLF 295
+ L + + I G+ + ++ V +G A A A + +DI +
Sbjct: 221 EEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVA 280
Query: 296 EINEAFASQYVYCIKKLGL-------------DPEK-----VNVNGGAVALGHPLGATG 336
+++AF + + LG EK VN+ GG A GHPLGATG
Sbjct: 281 TVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATG 339
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 62.2 bits (152), Expect = 1e-10
Identities = 88/392 (22%), Positives = 146/392 (37%), Gaps = 87/392 (22%)
Query: 24 IEKTRLNPSEVGDIVVGTVLAPG-STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAV 82
+E ++ ++ + VG + A ++ + A YAG +P V C+SG A+
Sbjct: 34 LEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAP-IPATRVEAACASGGAAL 92
Query: 83 ADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCL--LPMGITSENV 140
A+ +G D+ +AAG+E MT E +A D G T +
Sbjct: 93 RQAYLAVASGEADVVLAAGVEKMTDVPTPDA------TEAIARAGDYEWEEFFGATFPGL 146
Query: 141 A--------QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKR 192
++G T ++ L AV++H + +P +K
Sbjct: 147 YALIARRYMHKYGTTEEDLALVAVKNHYNGS-------------------KNPYAQFQKE 187
Query: 193 VTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLP 252
+T V+ + + +AD KL + S ++DGA AV+L S K
Sbjct: 188 IT--VEQVLN-SPPVADPLKLL------------DCSPITDGAAAVILA--SEEKAKEYT 230
Query: 253 ILGVFRSFSAVGVD-------PSVMGIGPAV-AIPAAVKSAGLQIDDINLFEINEAFASQ 304
V+ S D + AV A A K AG++ DI++ E+++ F
Sbjct: 231 DTPVWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA 290
Query: 305 YVYCIKKLGLDPEK-------------------VNVNGGAVALGHPLGATGARCVATLLS 345
+ + LG +K VN +GG A GHP+GATG ++
Sbjct: 291 EILAYEDLGF-AKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVW 349
Query: 346 EMKRRGKDCRFGVISMCIG-----SGMGAAAV 372
+++ + R VI G G G AV
Sbjct: 350 QLRGEAEKGRQQVIGAGYGLTHNVGGTGHTAV 381
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 55.7 bits (134), Expect = 2e-08
Identities = 81/387 (20%), Positives = 139/387 (35%), Gaps = 89/387 (22%)
Query: 16 LLFSVQAVIEKTRLNPSE--VGDIVVGTVLAP--------GSTRAMECRMAAFYAGFPET 65
L ++Q +E T L+ V +VVG L G +
Sbjct: 52 LATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYK 111
Query: 66 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQ 125
+R V C+SG AV A+ AG DI + G+E T S V G + + +
Sbjct: 112 PAMR-VEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRR 170
Query: 126 ARD-------CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 178
R CL A+R ++ ++ R AA A A+G K+ + +
Sbjct: 171 QRKLDDFTFPCLF---------AKRMKYIQEHGHFTMEDTARVAAKAYANGN-KNPLAHM 220
Query: 179 NTKIVDPKTGVEKRVTISVDDGIRP----NTTIADLAKLKPAFKKDGTTTAGNASQVSDG 234
+T+ + + + P N T ++ + SQVSDG
Sbjct: 221 HTRKLSLEF-------CTGASDKNPKFLGNETYKPFLRMT------------DCSQVSDG 261
Query: 235 AGAVLLMKRSLAVQKGLPILGVFRSFSA-VGVDPSVMGIG--------------PAVAIP 279
++L A ++GL +G+ + S V + G A
Sbjct: 262 GAGLVL-----ASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQ 316
Query: 280 AAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL-DPEK-----------------VNV 321
A+ AG++ D+ + E+++ F + + LG+ + VN
Sbjct: 317 KALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNT 376
Query: 322 NGGAVALGHPLGATGARCVATLLSEMK 348
GG ++ GHP+GATG + + + +MK
Sbjct: 377 GGGLLSFGHPVGATGVKQIMEVYRQMK 403
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 47.4 bits (113), Expect = 7e-06
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 47/179 (26%)
Query: 203 PNTTIADLAKLKPAFKKDGTT---TAG-----NASQVSDGAGAVLLM----------KRS 244
PN A A D T G + SQV+DG V+L R
Sbjct: 186 PNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARP 245
Query: 245 LAVQKG----LPILGVFRSFSAVGVDPSVMGIGPAV--AIPAAVKSAGLQIDDINLFEIN 298
+ KG LG+ + DP V+ P V A+ A + AG+ +DD++ FE++
Sbjct: 246 IPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---PHVRQAVLDAYRRAGVGLDDLDGFEVH 302
Query: 299 EAF-ASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGAR 338
+ F S+Y+ I +GL +N +GG + GHP+GA+G R
Sbjct: 303 DCFTPSEYL-AIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVR 360
Score = 29.3 bits (66), Expect = 3.5
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 15/94 (15%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAP-----GSTRAMECRMAAFYAGFPETVPLRTVNRQ 74
V + ++ ++ + VG G AM + G P + R
Sbjct: 34 VDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALWGVPAS-------RH 86
Query: 75 ---CSSGLQAVADVATAIKAGLYDIGIAAGLESM 105
C+SG A ++AG YD+ + G+E M
Sbjct: 87 EAACASGSVATLAAMADLRAGRYDVALVVGVELM 120
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 46.5 bits (111), Expect = 2e-05
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 229 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-------VDPSVMGIGPAVAIPAA 281
S VSDGA A++L A + FR+ + V DP GP A A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV--RFRARAHVNDFLPLSRRDPLAFE-GPRRAWQRA 269
Query: 282 VKSAGLQIDDINLFEINEAF--ASQYVYCIKKLGLDPE------------------KVNV 321
+ AG+ +DD++ E ++ F A Y + +GL P VN
Sbjct: 270 LAQAGVTLDDLSFVETHDCFTIAELIEY--EAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 322 NGGAVALGHPLGATG 336
+GG A GHP+GATG
Sbjct: 328 SGGLKAKGHPIGATG 342
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 45.7 bits (109), Expect = 2e-05
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 22/122 (18%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAG 286
+GAGA++L + A+ +G I + P+ G G A+ AA+ AG
Sbjct: 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAG 290
Query: 287 LQIDDIN----------LFEINEAFASQYVYCIKKL-GLDPEKVNVNGGAVALGHPLGAT 335
L +DI+ + E+ A IK++ G + + V+ GH LGA
Sbjct: 291 LTPEDIDYINAHGTSTPANDKAESLA------IKRVFGEHAKSLPVSSTKSLTGHTLGAA 344
Query: 336 GA 337
GA
Sbjct: 345 GA 346
Score = 30.7 bits (70), Expect = 1.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 67 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 104
P T C++G A+ D I+ G D+ IA G E+
Sbjct: 154 PNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA 191
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 44.9 bits (107), Expect = 4e-05
Identities = 73/319 (22%), Positives = 120/319 (37%), Gaps = 84/319 (26%)
Query: 66 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPK-VEIFT 124
+P+ VN CS+G A+ A+++G D +A G E M ++ V P +E F
Sbjct: 71 IPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFD 130
Query: 125 QARDCL-----LPM-----GITSENVAQRFGVTRQEQDLAAV-ESHRRAAAATASGKFKD 173
+A L P G +++G T E A + RR AA +F+D
Sbjct: 131 KALAELQGFDPAPPALRMFGGAGREHMEKYG-TTAET-FAKIGVKARRHAANNPYAQFRD 188
Query: 174 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 233
E +++D + L +L+ +
Sbjct: 189 EY--------------------TLEDVLASPMIWGPLTRLQ-------------CCPPTC 215
Query: 234 GAGAVLLMKRSLAVQKGLP----ILG---------VFRSFSAVGVDPSVMGIGPAVAIPA 280
GA A ++ A + GL I+ F S ++G A
Sbjct: 216 GAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSM----IDLVGYDMTRAAAQ 271
Query: 281 AV-KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE----------------KVNVN- 322
V + AG+ +DI++ E+++ F++ + + LGL PE + VN
Sbjct: 272 QVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNP 331
Query: 323 -GGAVALGHPLGATG-ARC 339
GG ++ GHPLGATG A+C
Sbjct: 332 SGGLLSKGHPLGATGLAQC 350
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 44.8 bits (107), Expect = 5e-05
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAG 286
+GAG ++L A +G I + A P G G A A+ AA+ AG
Sbjct: 230 GEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAG 289
Query: 287 L---QIDDIN-------LFEINEAFASQYVYCIKKLGLD-PEKVNVNGGAVALGHPLGAT 335
L ID IN L + E+ A IK++ + +KV V+ GH LGA
Sbjct: 290 LSPEDIDYINAHGTSTPLNDAAESKA------IKRVFGEHAKKVPVSSTKSMTGHLLGAA 343
Query: 336 GA-RCVATLLS 345
GA +ATLL+
Sbjct: 344 GAVEAIATLLA 354
Score = 34.8 bits (81), Expect = 0.076
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 28/110 (25%)
Query: 21 QAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG-----FPETVPLRTVNRQ- 74
A ++ L+P +G +V+G+ G +E A P VP+ N
Sbjct: 85 DAGLDPEELDPERIG-VVIGS--GIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAA 141
Query: 75 -------------------CSSGLQAVADVATAIKAGLYDIGIAAGLESM 105
C+SG A+ D A I+ G D+ IA G E++
Sbjct: 142 GQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEAL 191
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III
(KASIII) initiates the elongation in type II fatty acid
synthase systems. It is found in bacteria and plants.
Elongation of fatty acids in the type II systems occurs
by Claisen condensation of malonyl-acyl carrier protein
(ACP) with acyl-ACP. KASIII initiates this process by
specifically using acetyl-CoA over acyl-CoA.
Length = 320
Score = 39.8 bits (94), Expect = 0.002
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 285 AGLQIDDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGA 337
AGL DDI+ F I EA A K+LGL EKV VN G T A
Sbjct: 236 AGLTPDDIDWFVPHQANLRIIEAVA-------KRLGLPEEKVVVNLDRY------GNTSA 282
Query: 338 RCVATLLSEMKRRGKDCRFGVISMC-IGSGM--GAAAV 372
+ L E GK + ++ + G+G+ GAA +
Sbjct: 283 ASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 38.9 bits (91), Expect = 0.004
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 236 GAVLLMK-RSLAVQKGLPILGVFRSFSAV-----GVDPSVMGIGPAVAIPAAVKSAGLQI 289
GA+L+++ LA ++G I G F P G AI + +GL
Sbjct: 212 GAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTP 271
Query: 290 DDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVA- 341
+DI+ +N+ + I+ L P +V V+ A GH LGA+GA VA
Sbjct: 272 EDIDYIHAHGTATRLNDQREANL---IQALF--PHRVAVSSTKGATGHTLGASGALGVAF 326
Query: 342 TLLS 345
+LL+
Sbjct: 327 SLLA 330
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 39.0 bits (91), Expect = 0.004
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 222 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG--VFRSFSAVGVDPSV--MGIGPAVA 277
+ ++GAG ++L + LA+ +G PI G + + G SV G G A A
Sbjct: 220 FDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARA 279
Query: 278 IPAAVKSAGLQIDDI 292
I A+ AGL +DD+
Sbjct: 280 IRTALAKAGLSLDDL 294
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 38.3 bits (90), Expect = 0.005
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD--------PSVMGIGPAVAIPAAVK 283
+G G V+L + S A++ G I V R SAV D PS G A I A
Sbjct: 234 GEGVGVVVLKRLSDALRDGDRIYAVIRG-SAVNQDGRTKGITAPS--GEAQAALIRRAYA 290
Query: 284 SAGLQIDDINLFE 296
AG+ DI+ E
Sbjct: 291 RAGVDPSDIDYVE 303
>gnl|CDD|235785 PRK06365, PRK06365, acetyl-CoA acetyltransferase; Provisional.
Length = 430
Score = 36.8 bits (85), Expect = 0.017
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 281 AVKSAGLQ--IDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVN 320
A + AG+ ++D++L E+++A+ S + + LGL VN
Sbjct: 302 AYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVN 361
Query: 321 VNGGAVALGHPLGATGARCVATLLSEMKRRGK 352
+GG +A GH +GATG + +++ R K
Sbjct: 362 PSGGLLAAGHAVGATGIMQAVFMFWQLQGRIK 393
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 35.9 bits (84), Expect = 0.035
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 22/121 (18%)
Query: 233 DGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGL 287
+GAG ++L + A +G I + G P+ G G A A+ A+K AG+
Sbjct: 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGI 291
Query: 288 ---QIDDIN-------LFEINEAFASQYVYCIKK-LGLDPEKVNVNGGAVALGHPLGATG 336
ID IN + E A IK+ G KV V+ GH LGA G
Sbjct: 292 NPEDIDYINAHGTSTPAGDKAETQA------IKRVFGEHAYKVAVSSTKSMTGHLLGAAG 345
Query: 337 A 337
A
Sbjct: 346 A 346
Score = 30.5 bits (70), Expect = 1.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG 114
C++G A+ D A I G D+ +A G E+ + + + G
Sbjct: 162 CATGAHAIGDAARLIAYGDADVMVAGGAEA-AITPLGIAG 200
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)]
synthase III C terminal. This domain is found on
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
EC:2.3.1.41, the enzyme responsible for initiating the
chain of reactions of the fatty acid synthase in plants
and bacteria.
Length = 90
Score = 32.8 bits (76), Expect = 0.051
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 20/75 (26%)
Query: 285 AGLQIDDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGA 337
AGL DDI+ F I +A A K+LGL PEKV VN L G T A
Sbjct: 4 AGLTPDDIDWFVPHQANLRIIDAVA-------KRLGLPPEKVVVN-----LDR-YGNTSA 50
Query: 338 RCVATLLSEMKRRGK 352
+ L E GK
Sbjct: 51 ASIPLALDEAVEEGK 65
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein].
Length = 323
Score = 34.9 bits (81), Expect = 0.058
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 20/83 (24%)
Query: 277 AIPAAVKSAGLQIDDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALG 329
AI ++ AGL +DI+ F I EA A KKLG+ EKV V
Sbjct: 228 AIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIA-------KKLGIPEEKVVVT------V 274
Query: 330 HPLGATGARCVATLLSEMKRRGK 352
G T A + L E R G+
Sbjct: 275 DKYGNTSAASIPLALDEALREGR 297
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 34.0 bits (79), Expect = 0.12
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 267 PSVMGIGPAVAIPAAVKSAGL---QIDDIN-------LFEINEAFASQYVYCIKK-LGLD 315
P+ G G A A+ AA+K AG+ +D IN L + E A IK+ G
Sbjct: 270 PAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKA------IKRVFGDH 323
Query: 316 PEKVNVNGGAVALGHPLGATGA-RCVATLLS 345
K+ V+ GH LGA GA + T+L+
Sbjct: 324 AYKLAVSSTKSMTGHLLGAAGAIEAIFTVLA 354
Score = 31.7 bits (73), Expect = 0.59
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG 114
C++G A+ D I+ G D+ IA G E+ + + + G
Sbjct: 161 CATGTHAIGDAFRLIQRGDADVMIAGGAEA-AITPLGIAG 199
>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II.
Length = 540
Score = 33.4 bits (76), Expect = 0.20
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 233 DGAGAVLLMKRSLAVQKGLPILGVFR--SFSAVG---VDPSVMGIGPAVAIPAAVKSAGL 287
+GAG +LL + A ++G I F SF+ +P G G + I A+ +G+
Sbjct: 361 EGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGV 420
Query: 288 QIDDINLFEINEAFAS-------QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGA-RC 339
+D+N IN S +Y ++ G +PE + VN +GH LGA GA
Sbjct: 421 SKEDVNY--INAHATSTKAGDLKEYQALMRCFGQNPE-LRVNSTKSMIGHLLGAAGAVEA 477
Query: 340 VATL 343
+AT+
Sbjct: 478 IATV 481
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 32.7 bits (75), Expect = 0.31
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 274 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL-DPEKVNVNGGAVALGHPL 332
P+ A+ AA + G +++ E++ F Q + + LGL D KVN +GGA+A +P+
Sbjct: 250 PSTAL-AAEAATGGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPM 307
Query: 333 GATG 336
A G
Sbjct: 308 FAAG 311
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase. The structure of
beta-ketoacyl synthase is similar to that of the
thiolase family and also chalcone synthase. The active
site of beta-ketoacyl synthase is located between the N
and C-terminal domains.
Length = 298
Score = 32.7 bits (76), Expect = 0.32
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 266
+G G V+L + S A++ G PIL V R SAV D
Sbjct: 161 GEGVGVVVLKRLSDALRDGDPILAVIRG-SAVNQD 194
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 32.7 bits (75), Expect = 0.33
Identities = 76/347 (21%), Positives = 124/347 (35%), Gaps = 102/347 (29%)
Query: 66 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQ 125
+P+ V C++G +A A+ +G YDI +A G+E + + NP +
Sbjct: 79 IPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPG-TLADM 137
Query: 126 ARDCLLPMGITSENVAQ-------RFGVTRQEQDLA----AVESHRRAAAATASGKFKDE 174
P N AQ ++GV+R++ A +V+SH A
Sbjct: 138 TM----PNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGA----------- 182
Query: 175 IIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDG 234
+PK + K VT + + IA L + VSDG
Sbjct: 183 --------RNPKAHLRKAVTE---EQVLKAPMIAGPLGLF------------DCCGVSDG 219
Query: 235 AGAVL---------LMKRSLAVQKGLPI-LGVFRSFSAVGVDPSVMGIGPAVAIPA--AV 282
A A + L K+ K L + + G D S P I A A
Sbjct: 220 AAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYF---PTTRIAARKAY 276
Query: 283 KSAGLQIDD----INLFEINEAFASQYVYCIKKLGLDPE------------------KVN 320
+ AG I D +++ E+++ F+ + ++ LGL
Sbjct: 277 REAG--ITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQ 334
Query: 321 VNGGAVALGHPLGATGARCVATLLSEM---------KRRGKDCRFGV 358
++GG GHP+GA+G R +L EM +R+ K+ R +
Sbjct: 335 IDGGLKCFGHPIGASGLR----MLYEMYLQLLGRAGERQLKNPRLAL 377
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 31.7 bits (72), Expect = 0.76
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI----GPAVA--IPAAVKSA 285
+GAG V+L + S A + G I V R SAV D G+ A A I A+ A
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIR-GSAVNQDGRSNGLTAPNLEAQADVIREALADA 296
Query: 286 GLQIDDINLFE 296
G+ + E
Sbjct: 297 GIDPATVQYVE 307
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
synthase; Validated.
Length = 410
Score = 31.2 bits (71), Expect = 0.87
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 234 GAGAVLLMKRSLAVQKGLPILGVFRSFSAV-----GVDPSVMGIGPAVAIPAAVKSAGLQ 288
GAV+L A ++G +S G DPS+ G I AA++ AGL
Sbjct: 240 ACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSL--EGEMRVIRAALRRAGLG 297
Query: 289 IDDIN 293
+DI+
Sbjct: 298 PEDID 302
>gnl|CDD|179591 PRK03545, PRK03545, putative arabinose transporter; Provisional.
Length = 390
Score = 31.0 bits (71), Expect = 1.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 83 ADVATAIKAGLYDIGIAAG 101
DVA A+ +G+++IGI AG
Sbjct: 327 TDVAMALFSGIFNIGIGAG 345
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 418
Score = 30.9 bits (70), Expect = 1.3
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 260 FSAVGVDPSVMGIGPAVAIPAAVKSAGLQ---IDDINLFEINEAFASQYVYCIKKLGLDP 316
F V DP+ G A+ A++ AGL ID +N + L
Sbjct: 276 FHMVAPDPN--GERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333
Query: 317 EKVNVNGGAVALGHPLGATGA-RCVATLLS 345
+ V ALGH +GA GA + T+L+
Sbjct: 334 HRPAVYAPKSALGHSVGAVGAVESILTVLA 363
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 319
Score = 30.4 bits (70), Expect = 1.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 20/80 (25%)
Query: 280 AAVKSAGLQIDDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPL 332
A+++AGL +DI+ I +A A KKLGL EKV V +
Sbjct: 227 EALEAAGLTPEDIDWLVPHQANLRIIDATA-------KKLGLPMEKVVVT-----VDK-Y 273
Query: 333 GATGARCVATLLSEMKRRGK 352
G T A + L E R G+
Sbjct: 274 GNTSAASIPLALDEAVRDGR 293
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 30.5 bits (69), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 66 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 105
P+ + C+SG QA+ I AGL D+ + G ++
Sbjct: 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTT 115
>gnl|CDD|179420 PRK02399, PRK02399, hypothetical protein; Provisional.
Length = 406
Score = 30.2 bits (69), Expect = 1.9
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 23/72 (31%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP---------------- 63
+ V++ L +EV D + G VLA G R AA G P
Sbjct: 237 IAGVLD---LTTTEVCDELFGGVLAAGPDRL----EAAARTGIPQVVSPGALDMVNFGAP 289
Query: 64 ETVPLRTVNRQC 75
+TVP + R
Sbjct: 290 DTVPEKFRGRLL 301
>gnl|CDD|180380 PRK06066, PRK06066, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 29.7 bits (67), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 319 VNVNGGAVALGHPLGATGAR----CVATLLSEMKRRGKDCRFGVISMCIG--SGMGAAAV 372
VN +GG +A G PL A+G V L E R V++ G + G+ V
Sbjct: 323 VNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGARQGKAERAVVASWRGIPTLTGSVVV 382
Query: 373 FER 375
ER
Sbjct: 383 VER 385
>gnl|CDD|216061 pfam00687, Ribosomal_L1, Ribosomal protein L1p/L10e family. This
family includes prokaryotic L1 and eukaryotic L10.
Length = 200
Score = 29.5 bits (67), Expect = 2.7
Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 26/158 (16%)
Query: 161 RAAAATASGKFKD--EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 218
+A TA KF + E+ +N K K R T+ + G+ + + +AK P K
Sbjct: 2 KALKKTAKRKFDETVELQ-INLKKDPRKKDQNVRGTVVLPHGLGKDVKVCVIAK-DPEAK 59
Query: 219 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI------ 272
AG +D G L ++ ++KG + + F DP +M +
Sbjct: 60 AKEAKDAG-----ADVVGGEDLKEKY-KIKKGRKL---AKDFDVFLADPDIMPLLPKLLG 110
Query: 273 ---GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 307
GP +P + + I EA + +
Sbjct: 111 KVLGPRGKMPNPKTTVTPDVAK----AIEEAKSGTVEF 144
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase;
Provisional.
Length = 421
Score = 29.7 bits (67), Expect = 3.4
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 24/124 (19%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVK-SA 285
+GAG ++L + A+++G I R + + P G G + A+K A
Sbjct: 238 GEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGA 297
Query: 286 GLQIDDINLFEIN------------EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLG 333
+ I+D++ +N E A + V+ K+ V+ LGH LG
Sbjct: 298 NININDVDY--VNAHATSTPIGDKIELKAIKKVFG----DSGAPKLYVSSTKGGLGHLLG 351
Query: 334 ATGA 337
A GA
Sbjct: 352 AAGA 355
>gnl|CDD|236845 PRK11099, PRK11099, putative inner membrane protein; Provisional.
Length = 399
Score = 29.1 bits (66), Expect = 4.6
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 38 VVGTVLAPGSTR-AMECRMAAFYAGFP 63
++G ++A R AM C +AAF+ G P
Sbjct: 112 LIGGIIAGFGARLAMGCNLAAFFTGIP 138
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 29.0 bits (65), Expect = 4.8
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG 114
C++G ++ D I+ G D+ +A G ES +++++S+ G
Sbjct: 184 CATGAHSIGDAFRMIQFGDADVMVAGGTES-SIDALSIAG 222
>gnl|CDD|236933 PRK11573, PRK11573, hypothetical protein; Provisional.
Length = 413
Score = 28.9 bits (65), Expect = 4.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 17 LFSVQAVIEK------TRLNPS---EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 67
L +V+ ++E+ T ++P+ EV G+V+ G+ E AF PE
Sbjct: 300 LVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREIN-KAFNWHLPEDDA 358
Query: 68 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 105
RTVN L+ + T ++ G YDI I ++M
Sbjct: 359 -RTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNM 395
>gnl|CDD|221738 pfam12727, PBP_like, PBP superfamily domain. This family belongs
to the periplasmic binding domain superfamily. It is
often associated with a helix-turn-helix domain.
Length = 193
Score = 28.3 bits (64), Expect = 5.0
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 27/64 (42%)
Query: 67 PLRTVNRQCSSGLQAVAD-------------------------VATAIKAGLYDIGIAAG 101
+R VNRQ SG + + D VA A+ +G D G+ G
Sbjct: 93 GIRFVNRQRGSGTRVLLDELLRKAGISPEDINGYAREVRSHLAVAAAVASGKADAGL--G 150
Query: 102 LESM 105
+E+
Sbjct: 151 IEAA 154
>gnl|CDD|219178 pfam06792, UPF0261, Uncharacterized protein family (UPF0261).
Length = 403
Score = 29.0 bits (66), Expect = 5.1
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 63
V++ L +EV D + G VL+ G R AA G P
Sbjct: 236 FAGVLD---LTTTEVADELFGGVLSAGPDRL----TAAARKGIP 272
>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II;
Provisional.
Length = 342
Score = 28.9 bits (64), Expect = 5.1
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMG 134
C++G+QA+ D I+ D+ + G E++ ++++S+ G F AR
Sbjct: 91 CAAGVQAIGDAVRMIRNNEADVALCGGAEAV-IDTVSLAG--------FAAARALSTHFN 141
Query: 135 ITSENVAQRFGVTR 148
T E ++ F R
Sbjct: 142 STPEKASRPFDTAR 155
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 28.8 bits (65), Expect = 6.1
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 75 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG 114
C++G+QA+ D A I++G D+ + G E+ ++ +S+ G
Sbjct: 173 CAAGVQAIGDAARLIRSGEADVAVCGGTEA-AIDRVSLAG 211
Score = 28.0 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 271 GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV------YCIKKLGLDPEKVNVNGG 324
G G A+ A++ AG+ +++ +N S V IKK+ + V+
Sbjct: 287 GEGARRAMLIALRQAGIPPEEVQ--HLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSST 344
Query: 325 AVALGHPLGATGA-RCVATLL 344
A GH LGA G + T+L
Sbjct: 345 KSATGHLLGAAGGVEAIFTIL 365
>gnl|CDD|212536 cd11587, Arginase-like, Arginase types I and II and arginase-like
family. This family includes arginase, also known as
arginase-like amidino hydrolase family, and related
proteins, found in bacteria, archaea and eykaryotes.
Arginase is a binuclear Mn-dependent metalloenzyme and
catalyzes hydrolysis of L-arginine to L-ornithine and
urea (Arg, EC 3.5.3.1), the reaction being the fifth and
final step in the urea cycle, providing the path for the
disposal of nitrogenous compounds. Arginase controls
cellular levels of arginine and ornithine which are
involved in protein biosynthesis, and in production of
creatine, polyamines, proline and nitric acid. In
vertebrates, at least two isozymes have been identified:
type I cytoplasmic or hepatic liver-type arginase and
type II mitochondrial or non-hepatic arginase. Point
mutations in human arginase gene lead to
hyperargininemia with consequent mental disorders,
retarded development and early death. Arginase is a
therapeutic target to treat asthma, erectile
dysfunction, atherosclerosis and cancer.
Length = 294
Score = 27.8 bits (62), Expect = 8.7
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 14/106 (13%)
Query: 240 LMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 299
+M+ +L+ G + SF G+DP PA P GL + L + E
Sbjct: 202 VMEETLSYLLGRKKRPIHLSFDVDGLDPVFA---PATGTPV---VGGLSYREGLLI-MEE 254
Query: 300 AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLS 345
+ + G+D +VN + + T VA L+
Sbjct: 255 LAETGLL-----SGMDLVEVNPSLDKTP--EEVTKTANTAVALTLA 293
>gnl|CDD|182863 PRK10954, PRK10954, periplasmic protein disulfide isomerase I;
Provisional.
Length = 207
Score = 27.8 bits (62), Expect = 9.9
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 188 GVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 247
GVE +VT + +G++ TI A ++ F K AG + D A ++K SL
Sbjct: 101 GVEDKVTPPLFEGVQKTQTIQSAADIRDVFIK-----AGVKGEDYDAAWNSFVVK-SLVA 154
Query: 248 QK 249
Q+
Sbjct: 155 QQ 156
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0940 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,201,719
Number of extensions: 1990786
Number of successful extensions: 2422
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2235
Number of HSP's successfully gapped: 132
Length of query: 399
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 300
Effective length of database: 6,546,556
Effective search space: 1963966800
Effective search space used: 1963966800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.5 bits)