RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 015824
(399 letters)
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera
[TaxId: 350]}
Length = 268
Score = 164 bits (415), Expect = 1e-48
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+ AV+E+ + EV ++++G VL G R AA AG P+ +N+ SGL
Sbjct: 35 ISAVLERAGVAAGEVNEVILGQVLPAGEG-QNPARQAAMKAGVPQEATAWGMNQLAGSGL 93
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCL--------- 130
+AVA I G I +A G+ESM++ + K+ F +
Sbjct: 94 RAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFY 153
Query: 131 -LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV 189
MG T+ENVA+++ ++R EQD AV S +A AA G+FKDEI+P K G
Sbjct: 154 GYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVK------GR 207
Query: 190 EKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 249
+ +T+ D+ IR T+ +AKL+PAF K+GT TAGNAS ++DGA A LLM + A ++
Sbjct: 208 KGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRR 267
Query: 250 G 250
G
Sbjct: 268 G 268
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus
thermophilus [TaxId: 274]}
Length = 273
Score = 153 bits (388), Expect = 1e-44
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 22/248 (8%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+ +++++ + EV D+ G G RMA AGFP V TVNR C SGL
Sbjct: 32 LSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGL 91
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPK----------------VEIF 123
+AVA A AI AG + I +G+ESM+ +V V
Sbjct: 92 EAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPK 151
Query: 124 TQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV 183
QA MG T+EN+A+ +G+ R+EQD A+ SH++A A G+F+DE++PV K
Sbjct: 152 MQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG 211
Query: 184 DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKR 243
+ VE+ D+G R +T++ LA L+P F++ GT TAGN+S ++DGA AVLL+
Sbjct: 212 KEEILVEQ------DEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSD 265
Query: 244 SLAVQKGL 251
A GL
Sbjct: 266 DYAKAHGL 273
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea
ramigera [TaxId: 350]}
Length = 124
Score = 146 bits (370), Expect = 7e-44
Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 254 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG 313
LG S++ VGVDP VMG GP A A++ AG +I D++L E NEAFA+Q K LG
Sbjct: 4 LGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLG 63
Query: 314 LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 373
DP VNVNGGA+A+GHP+GA+GAR + TLL EMKRRG R G+ ++CIG GMG A
Sbjct: 64 WDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCI 121
Query: 374 ER 375
E
Sbjct: 122 ES 123
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 124
Score = 143 bits (361), Expect = 2e-42
Identities = 75/126 (59%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 250 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 309
LP+LG + F VGV P +MG+GPA AIP +++ GLQ+ DI++FEINEAFA+Q +YCI
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 310 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 369
KLG+D KVN GGA+ALGHPLG TGAR VAT+L E+K+ + GV+SMCIG+GMGA
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----QIGVVSMCIGTGMGA 117
Query: 370 AAVFER 375
AA+F +
Sbjct: 118 AAIFIK 123
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus
thermophilus [TaxId: 274]}
Length = 125
Score = 132 bits (334), Expect = 1e-38
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 254 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK-- 311
L R+ + GV P +MGIGP A A++ AGL D+ L E+NEAFA+Q + +++
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 312 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAA 371
L ++ +++N NGGA+ALGHPLGA+GAR + TL+ EM+RR +FG+ +MCIG G G A
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAV 120
Query: 372 VFER 375
V E
Sbjct: 121 VVEG 124
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit
(3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId:
296]}
Length = 128
Score = 124 bits (313), Expect = 2e-35
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
Query: 250 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 309
GL L V RS + GVDP++MG GP A A+K AGL + DI+ E+NEAFA+Q + +
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 310 K---KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSG 366
K L EKVN++GGA+ALGHP G +GAR TLL+ MK+ G FG+ +MCIG G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLG 118
Query: 367 MGAAAVFER 375
G A VFER
Sbjct: 119 QGIATVFER 127
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 269
Score = 128 bits (321), Expect = 5e-35
Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 14/231 (6%)
Query: 20 VQAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGL 79
+ E R + + + ++ G VL A E R A +G P + P +NRQCSSGL
Sbjct: 47 IGRFPEPLRADLNLIEEVACGNVL-NVGAGATEHRAACLASGIPYSTPFVALNRQCSSGL 105
Query: 80 QAVADVATAIKAGLYDIGIAAGLESMTVNSISVV---GQVNPKVEIFTQARDCLLPMGIT 136
AV D+A IK G DIG+A G+ESMT N +V + +++ +A+ CL+PMGIT
Sbjct: 106 TAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGIT 165
Query: 137 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS 196
+ENVA F ++R++QD A S+++A A G F+DEI+P+ +
Sbjct: 166 NENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIK---------LPDGSICQ 216
Query: 197 VDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLA 246
D+G RPN T L+ ++PAF KD GTTTAGNASQVSDG VLL +RS+A
Sbjct: 217 SDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVA 267
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit
(3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId:
296]}
Length = 262
Score = 119 bits (298), Expect = 9e-32
Identities = 81/229 (35%), Positives = 123/229 (53%), Gaps = 9/229 (3%)
Query: 20 VQAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 78
+ V+E+ ++++P EV D++ G V RMA+ P T +TV+R C S
Sbjct: 38 ISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSS 97
Query: 79 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 138
+ A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E
Sbjct: 98 MSALHTAAQAIMTGNGDVFVVGGVEHMGH--VSMMHGVDPNPHMSLYAAKASGMMGLTAE 155
Query: 139 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 198
+ + G++R++QD AV SH+ A AT GKFKDEIIP+ + D
Sbjct: 156 MLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-----KIFDYD 210
Query: 199 DGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLA 246
+ IRP+TT+ LA LKPAF K GT TAG +SQ++DGA +++M A
Sbjct: 211 ETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRA 259
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 372
Score = 41.0 bits (95), Expect = 2e-04
Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 275 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGA 334
A + + GLQI DI+L+ I+ ++ LG+ E + + G
Sbjct: 269 APVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQS---WDVLARFGN 325
Query: 335 TGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG---AAAVFE 374
+ + +L M ++ + + + G G +F+
Sbjct: 326 MLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFD 368
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 35.5 bits (82), Expect = 0.009
Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 23/120 (19%)
Query: 137 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS 196
SE +T E D V + A A+G ++ E+ V K+VD + T
Sbjct: 214 SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ-ELNGV--KVVDGRKEASSLFTRY 270
Query: 197 VDDGIRPN--------------------TTIADLAKLKPAFKKDGTTTAGNASQVSDGAG 236
+ P+ T+ D+ + F ++ + ++ G G
Sbjct: 271 IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 330
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206
{Streptomyces coelicolor [TaxId: 1902]}
Length = 148
Score = 31.5 bits (71), Expect = 0.072
Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 12/114 (10%)
Query: 265 VDPSVMGIGPAVA--IPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVN 322
+D V +A + G D++ + ++ L +DP
Sbjct: 34 LDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAF--- 90
Query: 323 GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFG----VISMCIGSGMGAAAV 372
L G A +L ++R + + G G+ A
Sbjct: 91 ---RFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMS 141
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase
C-terminal domain {Streptococcus pneumoniae [TaxId:
1313]}
Length = 196
Score = 30.9 bits (69), Expect = 0.18
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 320 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGD 377
V G++ L H + + + ++ +K +G F I + + + A ++ D
Sbjct: 140 QVANGSIVLMHDIHSPTVNALPRVIEYLKNQG--YTFVTIPEMLNTRLKAHELYYSRD 195
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago
sativa) [TaxId: 3879]}
Length = 154
Score = 29.9 bits (67), Expect = 0.31
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Query: 281 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVAL-GHPLGATGARC 339
A + G+ + + + + +KL L PEK+N ++ G+ A
Sbjct: 51 AFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFI 110
Query: 340 VATLLSEMKRRGKDCRFGVISMCIGSGMGA 369
+ + + + G + + G G
Sbjct: 111 LDEMRKKSTQNGLKTTGEGLEWGVLFGFGP 140
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA
{Bacillus subtilis [TaxId: 1423]}
Length = 235
Score = 29.4 bits (65), Expect = 0.56
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 320 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIG 364
+ GA+ L H + A + ++++K++G F I +
Sbjct: 189 QAHPGAIYLLHTVSRDNAEALDDAITDLKKQG--YTFKSIDDLMF 231
>d2zjrr1 b.34.5.1 (R:4-113) Ribosomal proteins L24 (L24p)
{Deinococcus radiodurans [TaxId: 1299]}
Length = 110
Score = 27.4 bits (61), Expect = 1.1
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 156 VESHRRAAAATASGKFKDEIIPV---NTKIVDPKTGVEKRVTISVDDG 200
+ + + + G + + + +VDP+TG RV + DG
Sbjct: 51 ITKNVKPSMTNPQGGQEQRELALHASKVALVDPETGKATRVRKQIVDG 98
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces
lividans [TaxId: 1916]}
Length = 192
Score = 27.9 bits (61), Expect = 1.8
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 320 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIG 364
+ G V L H A + + + +G G+IS G
Sbjct: 145 RLGNGQVILMHDWPANTLAAIPRIAQTLAGKG--LCSGMISPQTG 187
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase
BA0424 {Bacillus anthracis [TaxId: 1392]}
Length = 235
Score = 27.9 bits (61), Expect = 1.9
Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 320 NVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGS 365
++ G++ L H + A +A ++ +++ +G F + + S
Sbjct: 191 MIHPGSILLLHAISKDNAEALAKIIDDLREKG--YHFKSLDDLVKS 234
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative
beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor
[TaxId: 1902]}
Length = 208
Score = 27.7 bits (60), Expect = 2.2
Identities = 7/32 (21%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 74 QCSSGLQAVADVATAIKAGLYDIGIAAGLESM 105
+ + GL A+ I+ G + ++ G++S
Sbjct: 159 EQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189
>d1nbwa2 c.55.1.6 (A:2-91,A:257-405) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 239
Score = 27.8 bits (62), Expect = 2.3
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 250 GLPILGVFRSFSAVGVDPSVMGIGPAV-AIPAAVKSAGLQIDDINLFEINEA 300
+ + G+ + I + A+ A+ + D++ +NEA
Sbjct: 24 ARAFVASGIVATT-GMKGTRDNIAGTLAALEQALAKTPWSMSDVSRIYLNEA 74
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative
beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor
[TaxId: 1902]}
Length = 205
Score = 27.5 bits (60), Expect = 2.6
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 232 SDGAGAVLLMKRSLAVQKGLPILGVFR 258
++GA +L A+ +G I
Sbjct: 20 AEGAAMFVLEDYDSALARGARIHAEIS 46
>d1xzpa1 a.24.25.1 (A:118-211,A:372-450) TrmE connector domain
{Thermotoga maritima [TaxId: 2336]}
Length = 173
Score = 27.1 bits (59), Expect = 3.2
Identities = 5/63 (7%), Positives = 22/63 (34%)
Query: 157 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 216
E+ + + G +D + + ++++ + + + + L ++K
Sbjct: 18 ETSLKLSLRNLKGGLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEK 77
Query: 217 FKK 219
+
Sbjct: 78 LTE 80
>d2nn6h1 b.40.4.5 (H:73-167) S1-domain of Ribosomal RNA-processing
protein 4, RRP4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.7 bits (56), Expect = 4.1
Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Query: 26 KTRLNPSEVGDIVVGTV 42
KTR EVGDIVVG +
Sbjct: 1 KTRYIG-EVGDIVVGRI 16
>d2gycs1 b.34.5.1 (S:3-101) Ribosomal proteins L24 (L24p)
{Escherichia coli [TaxId: 562]}
Length = 99
Score = 25.8 bits (57), Expect = 4.4
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 179 NTKIVDPKTGVEKRVTISVDDG 200
N I + TG RV +DG
Sbjct: 66 NVAIFNAATGKADRVGFRFEDG 87
>d2d0oa2 c.55.1.6 (A:1-92,A:255-403) Diol dehydratase-reactivating
factor large subunit DdrA {Klebsiella oxytoca [TaxId:
571]}
Length = 241
Score = 25.9 bits (57), Expect = 7.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 277 AIPAAVKSAGLQIDDINLFEINEA 300
A+ + AG+ + DI+L INEA
Sbjct: 53 ALALVARGAGIAVSDISLIRINEA 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0670 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,429,584
Number of extensions: 65523
Number of successful extensions: 225
Number of sequences better than 10.0: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 29
Length of query: 399
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 312
Effective length of database: 1,213,086
Effective search space: 378482832
Effective search space used: 378482832
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.7 bits)