BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015828
(399 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
GN=At1g04910 PE=1 SV=1
Length = 519
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 219/391 (56%), Gaps = 15/391 (3%)
Query: 2 VSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRD 61
V CNGGLNQ R+AIC+ V AR +N TL++PELD SFW D S FQ I+DV+HFI +L+
Sbjct: 94 VRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKY 153
Query: 62 EVRILKELPPRLKK-RVEMGRVLSMPPISWSDISYYHNQILPLVQKYKVVHLNRTDARLA 120
+V+I+ ++P K + + + + P + I +Y L ++++ ++L RLA
Sbjct: 154 DVKIVGKIPDVHKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLA 213
Query: 121 NNGQPLEIQKLRCRVNFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAFSGC 180
E Q+LRCRVN+ ALRF I L + ++ LR G F+ +HLR+EMDMLAF+GC
Sbjct: 214 EEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGC 273
Query: 181 TQGCNKEEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALILRALDIDPNMQI 240
N EE + L + R K I N +R G CPLTPEE LILRA+ D + +I
Sbjct: 274 FDIFNPEEQKILRKYRKENFADKRLIYNE--RRAIGKCPLTPEEVGLILRAMRFDNSTRI 331
Query: 241 YIAAGEIYGGERRMANLAKAYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIF 300
Y+AAGE++GGE+ M +P+L + ++PS+ + +A+DY+V L SDIF
Sbjct: 332 YLAAGELFGGEQFMKPFRTLFPRL-DNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIF 390
Query: 301 VPTYDG--NMAKVVEGHRRFLGYKKTILLERKLLVDLIDQYSNGSLTWDEFSAAVKESH- 357
+PTYDG N A + GHR + G++ TI +RK L + G F AV+
Sbjct: 391 MPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRA--GFEEAVRRVML 448
Query: 358 ADRMGGPTNRLVIPDKPKEEDYFYSNPEECL 388
GGP R+ E ++ ++ EC
Sbjct: 449 KTNFGGPHKRV------SPESFYTNSWPECF 473
>sp|Q6LU82|PSTB1_PHOPR Phosphate import ATP-binding protein PstB 1 OS=Photobacterium
profundum GN=pstB1 PE=3 SV=1
Length = 272
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 320 GYKKTILLERKLLVDLIDQYSNGSLTWDEFSAAVKESHADRMGGPTNRLVIPDKPKEEDY 379
G + L ER++L D +++ G+ WDE + E+ GG RLVI E
Sbjct: 129 GLRLQGLKERRVLDDAVEKSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIE-- 186
Query: 380 FYSNPEECL---QTSSFDPLSS 398
PE L TS+ DP+S+
Sbjct: 187 ----PEVLLLDEPTSALDPIST 204
>sp|Q48HD9|PSTB1_PSE14 Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=pstB1 PE=3
SV=1
Length = 259
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 220 LTPEETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKLVRKETLLEPSDLRFF 279
L E+T + +R L+ N Q + + ++ E+R+ A P K TLL + R +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRIT--AIIGPSGCGKSTLLRVFN-RIY 62
Query: 280 QNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEG--HRRFLGYKKTIL----------- 326
+ Q A + L++ E +I P Y N + G ++ + + +I
Sbjct: 63 AMYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIFDNISYAIKHHE 121
Query: 327 -LERKLLVDLIDQYSNGSLTWDEFSAAVKESHADRMGGPTNRLVIPDKPKEEDYFYSNPE 385
L R+ + D ++Q G+ WDE +K+S GG RL I P+
Sbjct: 122 KLSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCIART------IALRPQ 175
Query: 386 ECL---QTSSFDPLSS 398
L TS+ DP+S+
Sbjct: 176 VLLLDEPTSALDPIST 191
>sp|Q4ZRT7|PSTB1_PSEU2 Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=pstB1 PE=3 SV=1
Length = 259
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 220 LTPEETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKLVRKETLLEPSDLRFF 279
L E+T + +R L+ N Q + + ++ E+R+ + P K TLL + R +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRITAIIG--PSGCGKSTLLRVFN-RIY 62
Query: 280 QNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEG--HRRFLGYKKTIL----------- 326
+ Q A + L++ E +I P Y N + G ++ + + +I
Sbjct: 63 AMYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIYDNISYAIKHHE 121
Query: 327 -LERKLLVDLIDQYSNGSLTWDEFSAAVKESHADRMGGPTNRLVIPDKPKEEDYFYSNPE 385
L R+ + D ++Q G+ WDE +K+S GG RL I P+
Sbjct: 122 KLSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCIART------IALRPQ 175
Query: 386 ECL---QTSSFDPLSS 398
L TS+ DP+S+
Sbjct: 176 VLLLDEPTSALDPIST 191
>sp|Q880A6|PSTB1_PSESM Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=pstB1 PE=3 SV=1
Length = 259
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 220 LTPEETALILRALDIDPNMQIYIAAGEIYGGERRMANLAKAYPKLVRKETLLEPSDLRFF 279
L E+T + +R L+ N Q + + ++ E+R+ + P K TLL + R +
Sbjct: 6 LANEKTKIQVRGLEFFYNNQKSLKSIDMTIPEKRITAIIG--PSGCGKSTLLRVFN-RIY 62
Query: 280 QNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEG--HRRFLGYKKTIL----------- 326
+ Q A + L++ E +I P Y N + G ++ + + +I
Sbjct: 63 AMYPKQEARGEVLLNGE-NILAPGYSMNRLRSHVGMVFQKPVPFPMSIYDNISYAIKHHE 121
Query: 327 -LERKLLVDLIDQYSNGSLTWDEFSAAVKESHADRMGGPTNRLVIPDKPKEEDYFYSNPE 385
L R+ + D ++Q G+ WDE +K+S GG RL I P+
Sbjct: 122 KLSRREMEDRVEQALRGAALWDEVKDKLKQSATGLSGGQQQRLCIART------IALRPQ 175
Query: 386 ECL---QTSSFDPLSS 398
L TS+ DP+S+
Sbjct: 176 VLLLDEPTSALDPIST 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,662,310
Number of Sequences: 539616
Number of extensions: 6239657
Number of successful extensions: 15216
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15210
Number of HSP's gapped (non-prelim): 8
length of query: 399
length of database: 191,569,459
effective HSP length: 120
effective length of query: 279
effective length of database: 126,815,539
effective search space: 35381535381
effective search space used: 35381535381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)