Query 015832
Match_columns 399
No_of_seqs 218 out of 1391
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 01:18:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015832.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015832hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0698 Serine/threonine prote 100.0 3E-51 6.6E-56 404.2 27.7 253 144-398 42-306 (330)
2 PLN03145 Protein phosphatase 2 100.0 2.7E-50 5.9E-55 400.3 28.8 245 144-397 67-331 (365)
3 KOG0697 Protein phosphatase 1B 100.0 3.9E-49 8.5E-54 363.6 21.8 254 136-396 17-291 (379)
4 PF00481 PP2C: Protein phospha 100.0 3.4E-48 7.5E-53 369.4 18.2 239 144-388 2-254 (254)
5 PTZ00224 protein phosphatase 2 100.0 7.7E-46 1.7E-50 369.7 28.8 238 144-397 24-272 (381)
6 COG0631 PTC1 Serine/threonine 100.0 9.2E-44 2E-48 340.3 22.6 235 144-398 10-254 (262)
7 KOG0699 Serine/threonine prote 100.0 1.6E-42 3.6E-47 329.5 18.8 161 232-397 329-504 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 3.1E-39 6.8E-44 304.6 28.2 243 144-395 3-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 8E-38 1.7E-42 296.0 27.9 240 144-393 8-255 (255)
10 KOG0700 Protein phosphatase 2C 100.0 4.3E-38 9.2E-43 306.3 19.2 228 153-384 82-379 (390)
11 PRK14559 putative protein seri 100.0 1.9E-37 4.2E-42 325.5 24.3 235 144-396 377-635 (645)
12 KOG1323 Serine/threonine phosp 100.0 8.8E-30 1.9E-34 240.6 21.5 225 170-396 142-487 (493)
13 KOG0618 Serine/threonine phosp 99.9 9E-25 2E-29 230.0 15.9 241 144-397 524-773 (1081)
14 KOG1379 Serine/threonine prote 99.9 3.8E-22 8.2E-27 189.1 20.0 211 154-394 89-329 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 1.7E-20 3.6E-25 173.5 15.1 180 147-361 3-196 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 7.5E-17 1.6E-21 146.9 20.9 175 153-380 14-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 9.3E-15 2E-19 158.7 21.3 193 150-395 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.9E-12 4.2E-17 117.4 19.5 177 171-396 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.3 2.3E-05 5.1E-10 78.8 17.4 188 155-396 161-366 (367)
20 KOG0260 RNA polymerase II, lar 86.2 4.2 9.1E-05 46.2 9.5 7 10-16 1484-1490(1605)
21 PRK10693 response regulator of 81.5 12 0.00027 36.4 10.1 31 235-265 227-259 (303)
22 KOG0260 RNA polymerase II, lar 78.8 12 0.00026 42.8 9.5 9 9-17 1448-1456(1605)
23 COG3700 AphA Acid phosphatase 37.5 58 0.0013 29.6 4.5 49 333-383 71-130 (237)
24 PF01436 NHL: NHL repeat; Int 28.8 99 0.0021 18.6 3.3 22 239-260 7-28 (28)
25 COG1539 FolB Dihydroneopterin 27.5 1.7E+02 0.0036 24.7 5.5 56 338-395 43-98 (121)
26 cd00534 DHNA_DHNTPE Dihydroneo 26.9 1.3E+02 0.0028 24.8 4.8 57 338-394 42-99 (118)
27 PF15449 Retinal: Retinal prot 26.9 1.7E+02 0.0038 33.6 6.9 20 31-50 1028-1048(1287)
28 cd01457 vWA_ORF176_type VWA OR 24.5 1.4E+02 0.0029 26.9 4.9 22 333-356 108-129 (199)
29 TIGR00525 folB dihydroneopteri 24.1 1.7E+02 0.0038 23.9 5.1 58 338-395 41-99 (116)
30 PF06972 DUF1296: Protein of u 23.3 98 0.0021 22.8 2.8 27 347-378 19-45 (60)
31 PF05001 RNA_pol_Rpb1_R: RNA p 23.0 37 0.0008 17.6 0.5 11 8-18 2-12 (14)
32 PRK11593 folB bifunctional dih 22.4 2.4E+02 0.0052 23.2 5.6 46 338-383 42-87 (119)
33 PF09436 DUF2016: Domain of un 21.0 57 0.0012 25.0 1.3 20 331-351 26-45 (72)
No 1
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-51 Score=404.17 Aligned_cols=253 Identities=51% Similarity=0.797 Sum_probs=230.2
Q ss_pred EEEeecCcCCCCCCccEEEecccC----CCC-cceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQ----GHS-KQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRG 218 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~----g~~-~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a 218 (399)
.+.++.+|+|..|||++....++. +.. ...||||||||||..+|+|+.++|+..+.++.........++++++++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 567799999999999999887744 333 689999999999999999999999999999887665335799999999
Q ss_pred HH-ccchhhhhc---cccCCceeEEEEEECC-eEEEEEeccccEEEEeCC-eeEEcCCCCCCCCHHHHHHHHHcCCceec
Q 015832 219 YL-NTDSEFLKE---DVYGGSCCVTALIQNG-TLVVSNAGDCRAVMSRGG-LAEALTSDHRPSREDEKSRIETMGGYVDL 292 (399)
Q Consensus 219 ~~-~~~~~l~~~---~~~~GtT~v~~li~~~-~l~vAnvGDsRa~l~r~g-~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~ 292 (399)
|. .+|.++.+. ...+|+|++++++.++ +|||||+|||||+|++.| ++++||.||+|.+++|+.||+.+||+|..
T Consensus 122 F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~ 201 (330)
T KOG0698|consen 122 FLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSN 201 (330)
T ss_pred HHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEE
Confidence 99 699999986 5678999988888866 999999999999999865 89999999999999999999999999998
Q ss_pred cCCcccccCCccccccccccccc-cceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHH
Q 015832 293 CHGTWRVQGSLAVSRALGDRHLK-QWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLA 371 (399)
Q Consensus 293 ~~~~~r~~g~lavsRalGd~~~k-~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~a 371 (399)
..+.||+.|.|+++|+|||..+| ++|+++||+....+..+++||||+||||||++++||++++++..+ .....+..+
T Consensus 202 ~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~--~~~~~~~~a 279 (330)
T KOG0698|consen 202 WGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDEL--ASISSPLAA 279 (330)
T ss_pred cCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHh--hccccHHHH
Confidence 88899999999999999999999 889999999999999989999999999999999999999999844 235689999
Q ss_pred HHHHHHHHHhCCCCCCeEEEEEEeCCC
Q 015832 372 CKKLVDLSVSRGSVDDVSVMLIQLGRY 398 (399)
Q Consensus 372 a~~Lv~~A~~~gs~DNiTvIvi~l~~~ 398 (399)
++.|.+.++.+|+.||||||||.|...
T Consensus 280 ~~~l~~~a~~~~s~DnitvvvV~l~~~ 306 (330)
T KOG0698|consen 280 AKLLATEALSRGSKDNITVVVVRLKSS 306 (330)
T ss_pred HHHHHHHHhhcCCCCCeEEEEEEecCc
Confidence 999999999999999999999999764
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.7e-50 Score=400.28 Aligned_cols=245 Identities=38% Similarity=0.644 Sum_probs=215.0
Q ss_pred EEEeecCcCCCCCCccEEEecccCC--------CCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHH
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQG--------HSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAV 215 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~g--------~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l 215 (399)
++.+|.+|.|+.|||+|++..++.. ..+..||||||||||+.++++|++.+++.|.+.... ...++++|
T Consensus 67 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~---~~~~~~al 143 (365)
T PLN03145 67 SGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF---PREIEKVV 143 (365)
T ss_pred EEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc---chhHHHHH
Confidence 6899999999999999987665421 234689999999999999999999999988764221 34678889
Q ss_pred HHHHHccchhhhhc-----cccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCce
Q 015832 216 KRGYLNTDSEFLKE-----DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYV 290 (399)
Q Consensus 216 ~~a~~~~~~~l~~~-----~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v 290 (399)
+++|..+++++.+. ...+|||+++++|.++++|+||+||||+|++|+|++++||+||++.++.|++||.+.||++
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v 223 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYV 223 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCce
Confidence 99999999998663 2358999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCcccccCCcccccccccccccc-------ceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCC
Q 015832 291 DLCHGTWRVQGSLAVSRALGDRHLKQ-------WIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSI 363 (399)
Q Consensus 291 ~~~~~~~r~~g~lavsRalGd~~~k~-------~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~ 363 (399)
... ++.|.+++||+|||..+|. .++++|++..+++.++|+|||||||||||+|+++|+++++++.+..
T Consensus 224 ~~g----~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~- 298 (365)
T PLN03145 224 YDG----YLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQE- 298 (365)
T ss_pred ecc----eECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhc-
Confidence 642 7789999999999988763 3789999999999999899999999999999999999998764332
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCC
Q 015832 364 DAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGR 397 (399)
Q Consensus 364 ~~~~~~~aa~~Lv~~A~~~gs~DNiTvIvi~l~~ 397 (399)
..+++++|+.|+++|+.+|+.||||||||+|+.
T Consensus 299 -~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~ 331 (365)
T PLN03145 299 -HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQS 331 (365)
T ss_pred -CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeec
Confidence 357999999999999999999999999999974
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-49 Score=363.62 Aligned_cols=254 Identities=33% Similarity=0.531 Sum_probs=224.1
Q ss_pred eeecCCceEEEeecCcCCCCCCccEEEecccC-CCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHH--h---cChhH
Q 015832 136 VEDERDGFYSVYCKRGRREAMEDRFSALVDFQ-GHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVL--R---RDIED 209 (399)
Q Consensus 136 ~~~~~~~~~~~~s~~G~R~~neD~~~~~~~~~-g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~--~---~~~~~ 209 (399)
-+.++.. |+++++||||-+|||++.+...+. +-.++.||+|||||.|+..|.+|+++|...|...-. . ....+
T Consensus 17 G~GNglr-yg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~ 95 (379)
T KOG0697|consen 17 GEGNGLR-YGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVE 95 (379)
T ss_pred CcCCcee-eeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHH
Confidence 3445555 999999999999999998765543 346799999999999999999999999988875322 2 12256
Q ss_pred HHHHHHHHHHHccchhhhhc------cccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHH
Q 015832 210 QIEDAVKRGYLNTDSEFLKE------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRI 283 (399)
Q Consensus 210 ~i~~~l~~a~~~~~~~l~~~------~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri 283 (399)
+++.-|+.+|+.+|+.+... ..++|+|++.+++...++|++|+||||++|+|+|+...-|.||+|..+.|++||
T Consensus 96 ~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRI 175 (379)
T KOG0697|consen 96 NVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERI 175 (379)
T ss_pred HHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHH
Confidence 88999999999999876543 346899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeccCCcccccCCccccccccccccc---------cceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHH
Q 015832 284 ETMGGYVDLCHGTWRVQGSLAVSRALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAID 354 (399)
Q Consensus 284 ~~~Gg~v~~~~~~~r~~g~lavsRalGd~~~k---------~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~ 354 (399)
+++||.|-.. |++|.|+++|+|||+.+| ++|+++|++........|+|||||+|||||+|+++|+.+
T Consensus 176 qnAGGSVMIq----RvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelce 251 (379)
T KOG0697|consen 176 QNAGGSVMIQ----RVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCE 251 (379)
T ss_pred hcCCCeEEEE----EecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHH
Confidence 9999999764 999999999999999999 579999999999998889999999999999999999999
Q ss_pred HHhccccCCCCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeC
Q 015832 355 IARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLG 396 (399)
Q Consensus 355 iv~~~~~~~~~~~~~~aa~~Lv~~A~~~gs~DNiTvIvi~l~ 396 (399)
+++..+.- ..+..++|..+++.++-+|++||+|+|+|-|-
T Consensus 252 fv~sRl~V--t~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp 291 (379)
T KOG0697|consen 252 FVKSRLEV--TSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFP 291 (379)
T ss_pred HHHhhhee--cccHHHHHHHHHHHHHhccCccCceEEEEecC
Confidence 99974332 35899999999999999999999999999874
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=3.4e-48 Score=369.44 Aligned_cols=239 Identities=45% Similarity=0.724 Sum_probs=205.5
Q ss_pred EEEeecCcCCCCCCccEEEecccC---CCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQ---GHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYL 220 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~---g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~ 220 (399)
|++.+.+|+|..|||++++..++. +..+..+|+|||||||..+++++++.+++.+.+...... .+.+.++|..+|.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~-~~~~~~al~~a~~ 80 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFND-GNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhccccc-ccchhhcccceee
Confidence 788999999999999999998764 457789999999999999999999999988877766544 3378999999999
Q ss_pred c-cchhhhh-----ccccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeE-EcCCCCCCCCHHHHHHHHHcCCceecc
Q 015832 221 N-TDSEFLK-----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAE-ALTSDHRPSREDEKSRIETMGGYVDLC 293 (399)
Q Consensus 221 ~-~~~~l~~-----~~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~-~LT~DH~~~~~~e~~Ri~~~Gg~v~~~ 293 (399)
. +++.+.. ....+|||+++++|.+++||+||+||||+||++++... +||.||++.++.|+.||+++||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 8888876 35688999999999999999999999999999999888 99999999999999999999999985
Q ss_pred CCcccccCCcccccccccccccc----ceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHH
Q 015832 294 HGTWRVQGSLAVSRALGDRHLKQ----WIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPM 369 (399)
Q Consensus 294 ~~~~r~~g~lavsRalGd~~~k~----~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~ 369 (399)
.+|+.|.|++||+|||..+|+ .|+++|++..+++.++++|||||||||||+++++|+++++++.... ...++
T Consensus 160 --~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~--~~~~~ 235 (254)
T PF00481_consen 160 --NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNS--GRSPQ 235 (254)
T ss_dssp --TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHH--HSHHH
T ss_pred --chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhc--CCcHH
Confidence 569999999999999999998 8999999999999999789999999999999999999999984211 11489
Q ss_pred HHHHHHHHHHHhCCCCCCe
Q 015832 370 LACKKLVDLSVSRGSVDDV 388 (399)
Q Consensus 370 ~aa~~Lv~~A~~~gs~DNi 388 (399)
.+|+.|+++|+++|+.|||
T Consensus 236 ~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 236 EAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999997
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=7.7e-46 Score=369.72 Aligned_cols=238 Identities=32% Similarity=0.529 Sum_probs=204.5
Q ss_pred EEEeecCcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHccc
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTD 223 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~~~~ 223 (399)
++..+.+|+|+.|||++.+... .+..+|||||||||..+++++++.|.+.+.+.... ...+.|++++..+|
T Consensus 24 ~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~-----~~~~~l~~a~~~~d 94 (381)
T PTZ00224 24 CASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP-----MTDERMEELCLEID 94 (381)
T ss_pred EEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc-----ccHHHHHHHHHHHH
Confidence 8899999999999999876543 23569999999999999999999998766433111 12345888999999
Q ss_pred hhhhhccccCCceeEEEEEE-CCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCC
Q 015832 224 SEFLKEDVYGGSCCVTALIQ-NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGS 302 (399)
Q Consensus 224 ~~l~~~~~~~GtT~v~~li~-~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~ 302 (399)
+++.+....+|||+++++|. ++++||||+||||+|++|+|++++||+||++.++.|+.||...||.+.. +|+.|.
T Consensus 95 ~~i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~----~Rv~G~ 170 (381)
T PTZ00224 95 EEWMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVS----NRVDGD 170 (381)
T ss_pred HHHHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEecc----ccccCc
Confidence 99887766779999988876 5789999999999999999999999999999999999999999999864 388899
Q ss_pred ccccccccccccc---------cceeeeeeEEEEEecCCCeEEEEECCccCC-CCCHHHHHHHHhccccCCCCCCHHHHH
Q 015832 303 LAVSRALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWD-KVSNQEAIDIARPFCQSIDAPEPMLAC 372 (399)
Q Consensus 303 lavsRalGd~~~k---------~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd-~ls~~ei~~iv~~~~~~~~~~~~~~aa 372 (399)
+++||+|||..+| +.|+++||+..+.+.++ |||||||||||| +++++|+++++++.+. ...+++.+|
T Consensus 171 l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~-D~llLaSDGL~d~~ls~eEi~~iv~~~l~--~~~~~~~aA 247 (381)
T PTZ00224 171 LAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSN-DFIILACDGVFEGNFSNEEVVAFVKEQLE--TCDDLAVVA 247 (381)
T ss_pred eeeecccCCcccccccccccccCcceeeeEEEEEECCCC-CEEEEECCCcCcCccCHHHHHHHHHHHHh--cCCCHHHHH
Confidence 9999999997644 45789999999999986 899999999999 7999999999975221 135789999
Q ss_pred HHHHHHHHhCCCCCCeEEEEEEeCC
Q 015832 373 KKLVDLSVSRGSVDDVSVMLIQLGR 397 (399)
Q Consensus 373 ~~Lv~~A~~~gs~DNiTvIvi~l~~ 397 (399)
+.|+++|+.+|+.||||||||+|..
T Consensus 248 ~~Lv~~A~~rGs~DNITvIvV~~~~ 272 (381)
T PTZ00224 248 GRVCDEAIRRGSKDNISCLIVQLKD 272 (381)
T ss_pred HHHHHHHHhcCCCCCEEEEEEEeeC
Confidence 9999999999999999999999965
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-44 Score=340.29 Aligned_cols=235 Identities=31% Similarity=0.451 Sum_probs=205.2
Q ss_pred EEEeecCc-CCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChh---HHHHHHHHHHH
Q 015832 144 YSVYCKRG-RREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIE---DQIEDAVKRGY 219 (399)
Q Consensus 144 ~~~~s~~G-~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~---~~i~~~l~~a~ 219 (399)
++..+..| .|.+|||++.+..+..+.. ..||+|||||||+.++++|++.+++.|.+.+...... +.+.+.+.+++
T Consensus 10 ~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~ 88 (262)
T COG0631 10 VAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAI 88 (262)
T ss_pred eeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Confidence 44555555 4889999999988655545 7899999999999999999999999999988764321 11688899999
Q ss_pred Hccchhhhhcc------ccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceecc
Q 015832 220 LNTDSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLC 293 (399)
Q Consensus 220 ~~~~~~l~~~~------~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~ 293 (399)
..+++++.... ..+|||++++++.++++|+||+||||+||+|+|.+++||+||++.++.++.|+...++..
T Consensus 89 ~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~~--- 165 (262)
T COG0631 89 LKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEAR--- 165 (262)
T ss_pred HHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHHH---
Confidence 99998887753 578999999999999999999999999999999999999999999999999987765554
Q ss_pred CCcccccCCccccccccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHH
Q 015832 294 HGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACK 373 (399)
Q Consensus 294 ~~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~ 373 (399)
.++..+++||+||+... .+|++....++++ ||||||||||||.++++|++++++. ..+++++++
T Consensus 166 ----~~~~~~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~------~~~~~~~~~ 229 (262)
T COG0631 166 ----SHPRRNALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKN------SETPQEAAD 229 (262)
T ss_pred ----hCccchhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhc------CCCHHHHHH
Confidence 33455699999999985 5999999999998 9999999999999999999999996 579999999
Q ss_pred HHHHHHHhCCCCCCeEEEEEEeCCC
Q 015832 374 KLVDLSVSRGSVDDVSVMLIQLGRY 398 (399)
Q Consensus 374 ~Lv~~A~~~gs~DNiTvIvi~l~~~ 398 (399)
+|+++|+++|+.||+|+|+|++..+
T Consensus 230 ~li~~a~~~g~~DNiT~ilv~~~~~ 254 (262)
T COG0631 230 KLIELALEGGGPDNITVVLVRLNGE 254 (262)
T ss_pred HHHHHHHhcCCCCceEEEEEEeecc
Confidence 9999999999999999999998765
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=329.53 Aligned_cols=161 Identities=38% Similarity=0.654 Sum_probs=149.3
Q ss_pred cCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCccccccccc
Q 015832 232 YGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGD 311 (399)
Q Consensus 232 ~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsRalGd 311 (399)
.+|||+++|+|.+++|||||+||||+|++|+|+++-|+.||+|..+.|-.||.++||.|... .|++|.|.++|+|||
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD---GRVNGGLNLSRA~GD 405 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD---GRVNGGLNLSRAFGD 405 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec---ceecCccchhhhhhh
Confidence 35999999999999999999999999999999999999999999999999999999999854 399999999999999
Q ss_pred cccc---------cceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhC
Q 015832 312 RHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSR 382 (399)
Q Consensus 312 ~~~k---------~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~ 382 (399)
..+| ++|++-|||+++.|+++++|+||++||||++|+.||++++++..+. .......+|++|++.++.-
T Consensus 406 HaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~--~n~~ls~iceeL~D~CLAp 483 (542)
T KOG0699|consen 406 HAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLA--KNSSLSEICEELCDACLAP 483 (542)
T ss_pred hhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHh--cCchHHHHHHHHHHhhcCC
Confidence 9998 5799999999999999999999999999999999999999998655 2467889999999999974
Q ss_pred ------CCCCCeEEEEEEeCC
Q 015832 383 ------GSVDDVSVMLIQLGR 397 (399)
Q Consensus 383 ------gs~DNiTvIvi~l~~ 397 (399)
-+.||+|||++.|.+
T Consensus 484 ~T~GDGTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 484 STDGDGTGCDNMTVIITTFKR 504 (542)
T ss_pred CCCCCCcCCCcceEEEEEecc
Confidence 358999999999975
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=3.1e-39 Score=304.61 Aligned_cols=243 Identities=44% Similarity=0.699 Sum_probs=212.8
Q ss_pred EEEeecCcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHHHc
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRD--IEDQIEDAVKRGYLN 221 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~--~~~~i~~~l~~a~~~ 221 (399)
++..+.+|+|..|||++.+...... .+..+|+|+|||||+..++++++.+.+.+.+.+.... ..+.+...|+++|..
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLR 81 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 6677888999999999998765421 2468999999999999999999999999998876553 156788899999999
Q ss_pred cchhhhhcc------ccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCC
Q 015832 222 TDSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHG 295 (399)
Q Consensus 222 ~~~~l~~~~------~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~ 295 (399)
+++.+.... ..+|||++++++.++.++++|+||||+|++|+++++++|.||++.++.++.||...+|++.
T Consensus 82 ~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~---- 157 (254)
T cd00143 82 ADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS---- 157 (254)
T ss_pred HHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE----
Confidence 999887653 5779999999999999999999999999999999999999999999999999999988765
Q ss_pred cccccCCccccccccccccccceeeeeeEEEEEe-cCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHH
Q 015832 296 TWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRI-KPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKK 374 (399)
Q Consensus 296 ~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l-~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~ 374 (399)
.++.++.+.++|+||+..+|+.+..+|++..+.+ +++ ++||||||||||+++++++.+++.... .+.+++++|++
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~-d~ill~SDG~~~~l~~~~i~~~~~~~~---~~~~~~~~a~~ 233 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDD-DFLILASDGLWDVLSNQEAVDIVRSEL---AKEDLQEAAQE 233 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCC-cEEEEECCCCeeccChHHHHHHHHHHh---cccCHHHHHHH
Confidence 2366778899999999988888889999999999 665 899999999999999999999998720 00279999999
Q ss_pred HHHHHHhCCCCCCeEEEEEEe
Q 015832 375 LVDLSVSRGSVDDVSVMLIQL 395 (399)
Q Consensus 375 Lv~~A~~~gs~DNiTvIvi~l 395 (399)
|++.|..+++.||+|+|+++|
T Consensus 234 l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 234 LVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHHHHHhCCCCCCEEEEEEeC
Confidence 999999999999999999975
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=8e-38 Score=296.03 Aligned_cols=240 Identities=45% Similarity=0.763 Sum_probs=209.4
Q ss_pred EEEeecCcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHcc
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDI-EDQIEDAVKRGYLNT 222 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~-~~~i~~~l~~a~~~~ 222 (399)
++..+.+|.|..|||++.+..+.. .+..+|+|||||||..+++++++.+.+.+.+....... ...+.+.|++++..+
T Consensus 8 ~~~~~~~~~r~~neD~~~~~~~~~--~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 8 YGLSSMQGVRKPMEDAHVITPDLS--DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred EEEecCCCCCCCCcceEEEeccCC--CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 667788899999999998876532 44789999999999999999999999888776543321 246888899999999
Q ss_pred chhhhhcc------ccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCc
Q 015832 223 DSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGT 296 (399)
Q Consensus 223 ~~~l~~~~------~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~ 296 (399)
++.+.... ..+|||++++++.+++++++|+||||+|++|++++++||+||++.++.|..||...++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~--- 162 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVING--- 162 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECC---
Confidence 99887652 357999999999999999999999999999999999999999999999999999999987643
Q ss_pred ccccCCccccccccccccccceeeeeeEEEEEe-cCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHH
Q 015832 297 WRVQGSLAVSRALGDRHLKQWIIAEPETKIIRI-KPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 375 (399)
Q Consensus 297 ~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l-~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~L 375 (399)
++.+.+.++|++|+..+|+.+..+|++...++ .++ ++||||||||||+++++++.+++.+.... .++.++|+.|
T Consensus 163 -~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~-d~ill~SDGv~~~l~~~~i~~~~~~~~~~---~~~~~~~~~l 237 (255)
T smart00332 163 -RVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKD-DFLILASDGLWDVLSNQEVVDIVRKHLSK---SDPEEAAKRL 237 (255)
T ss_pred -eECCeEecccccCCHhhcCCeEeeeEEEEEEecCCC-cEEEEECCccccCCCHHHHHHHHHHHhhc---CCHHHHHHHH
Confidence 67778999999999999999999999999997 554 99999999999999999999999873110 2699999999
Q ss_pred HHHHHhCCCCCCeEEEEE
Q 015832 376 VDLSVSRGSVDDVSVMLI 393 (399)
Q Consensus 376 v~~A~~~gs~DNiTvIvi 393 (399)
++.|..++..||+|+|||
T Consensus 238 ~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 238 IDLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHHcCCCCCeEEEEC
Confidence 999999999999999986
No 10
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=306.33 Aligned_cols=228 Identities=36% Similarity=0.579 Sum_probs=190.3
Q ss_pred CCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcC--------------------------
Q 015832 153 REAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRD-------------------------- 206 (399)
Q Consensus 153 R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~-------------------------- 206 (399)
...-||++.+..... .++.|+||||||||..++++++++|..++..++....
T Consensus 82 ~~~~edrv~~~~s~~--~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~ 159 (390)
T KOG0700|consen 82 GKAEEDRVSVAVSEE--NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQL 159 (390)
T ss_pred CCcccCcceeeeecc--CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcc
Confidence 455678777666543 5689999999999999999999999998885554200
Q ss_pred ----h-hHHHHHHHHHHHHccchhhhhc----------cccCCceeEEEEEECCeEEEEEeccccEEEEe---CC---ee
Q 015832 207 ----I-EDQIEDAVKRGYLNTDSEFLKE----------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSR---GG---LA 265 (399)
Q Consensus 207 ----~-~~~i~~~l~~a~~~~~~~l~~~----------~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r---~g---~~ 265 (399)
. ...+.++|.+||.+++++|... -..+|+||+++++.++.|||||+|||||+|.+ +| .+
T Consensus 160 ~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A 239 (390)
T KOG0700|consen 160 SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVA 239 (390)
T ss_pred cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEE
Confidence 0 3568899999999999999754 23579999999999999999999999999965 33 68
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCcee--ccCCcccccCCccccccccccccc---------------------cceeeee
Q 015832 266 EALTSDHRPSREDEKSRIETMGGYVD--LCHGTWRVQGSLAVSRALGDRHLK---------------------QWIIAEP 322 (399)
Q Consensus 266 ~~LT~DH~~~~~~e~~Ri~~~Gg~v~--~~~~~~r~~g~lavsRalGd~~~k---------------------~~v~~~P 322 (399)
.|||.||+.++++|++||...+..-. ...+.||+.|.|.++|||||..+| |+++++|
T Consensus 240 ~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP 319 (390)
T KOG0700|consen 240 VQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEP 319 (390)
T ss_pred EecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccc
Confidence 99999999999999999999875322 112238999999999999999998 6799999
Q ss_pred eEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhCCC
Q 015832 323 ETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGS 384 (399)
Q Consensus 323 di~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~gs 384 (399)
+++.++|.+.|.||||+||||||++++||+++++..++.+. ..-+.+|+.|++.|+.+..
T Consensus 320 ~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~--~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 320 SITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGK--FPDGNPATHLIRHALGRAA 379 (390)
T ss_pred eEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccC--CCCCCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999975542 2334589999999987643
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.9e-37 Score=325.50 Aligned_cols=235 Identities=23% Similarity=0.334 Sum_probs=180.4
Q ss_pred EEEeecCcC-CCCCCccEEEecccC------C--CCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcCh-hHHHHH
Q 015832 144 YSVYCKRGR-REAMEDRFSALVDFQ------G--HSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDI-EDQIED 213 (399)
Q Consensus 144 ~~~~s~~G~-R~~neD~~~~~~~~~------g--~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~-~~~i~~ 213 (399)
++.+|++|. |++|||++.+..++. + .....+|+|||||||+.+++.|++.+++.|.+.+..... ....++
T Consensus 377 ~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~ 456 (645)
T PRK14559 377 DAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEE 456 (645)
T ss_pred EEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHH
Confidence 678899996 999999987754321 1 123579999999999999999999988888776543210 112355
Q ss_pred HHHHHHHccchhhhhc--------cccCCceeEEEEEECCeEEEEEeccccEEEE-eCCeeEEcCCCCCCCCHHHHHHHH
Q 015832 214 AVKRGYLNTDSEFLKE--------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMS-RGGLAEALTSDHRPSREDEKSRIE 284 (399)
Q Consensus 214 ~l~~a~~~~~~~l~~~--------~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~-r~g~~~~LT~DH~~~~~~e~~Ri~ 284 (399)
.|++++..+|+.+.+. ...+|||+++++|.++++|++|+||||+|++ |+|++++||+||++.++..+.++
T Consensus 457 ~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~Gi- 535 (645)
T PRK14559 457 TIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQRGV- 535 (645)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHHhCC-
Confidence 6777887777777542 2358999999999999999999999999998 57899999999998765444332
Q ss_pred HcCCceeccCCcccccCCccccccccccccccceeeeeeEEEEEecCCCeEEEEECCccCCC--CCH---HHHHHHHhcc
Q 015832 285 TMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDK--VSN---QEAIDIARPF 359 (399)
Q Consensus 285 ~~Gg~v~~~~~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~--ls~---~ei~~iv~~~ 359 (399)
.. .......+.++++|+||+...+ ..+|++..+.+.++ ++||||||||||+ +.+ +++..++..
T Consensus 536 ------~~-~~a~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~il~~- 603 (645)
T PRK14559 536 ------EP-QIAYARPDAYQLTQALGPRDNS---AIQPDIQFLEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPLLSS- 603 (645)
T ss_pred ------CH-HHHhcCcccceeeeccCCCCCC---cccceEEEEEcCCC-CEEEEECCCCCCCcccchHHHHHHHHHHhc-
Confidence 11 1122335678999999986543 24899999999986 8999999999994 443 344555554
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeC
Q 015832 360 CQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLG 396 (399)
Q Consensus 360 ~~~~~~~~~~~aa~~Lv~~A~~~gs~DNiTvIvi~l~ 396 (399)
..++.+++++|+++|+.+|+.||||+|||++.
T Consensus 604 -----~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~ 635 (645)
T PRK14559 604 -----SANLDQGLNKLIDLANQYNGHDNITAILVRLK 635 (645)
T ss_pred -----CCCHHHHHHHHHHHHHHcCCCCcEEEEEEEec
Confidence 45899999999999999999999999999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-30 Score=240.65 Aligned_cols=225 Identities=33% Similarity=0.573 Sum_probs=183.2
Q ss_pred CcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHh---c----C------------------------------hhHHHH
Q 015832 170 SKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLR---R----D------------------------------IEDQIE 212 (399)
Q Consensus 170 ~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~---~----~------------------------------~~~~i~ 212 (399)
-+.++|.+||||.|..+|-.|++.+++.|.+.+.. . + .+.-+.
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 35789999999999999999999999988876651 1 0 023467
Q ss_pred HHHHHHHHccchhhhhc----cccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHc--
Q 015832 213 DAVKRGYLNTDSEFLKE----DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETM-- 286 (399)
Q Consensus 213 ~~l~~a~~~~~~~l~~~----~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~-- 286 (399)
.+|..||+.+|+++.++ ...+|||+++++.--++||+||+|||||+|+|++++++|+++.+| +.||+|++.+
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~Laf 299 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQELAF 299 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHHhh
Confidence 89999999999999876 456799999999999999999999999999999999999999976 6778998764
Q ss_pred ------CCceec--------------------cC-----------------------CcccccCCccccccccccccc--
Q 015832 287 ------GGYVDL--------------------CH-----------------------GTWRVQGSLAVSRALGDRHLK-- 315 (399)
Q Consensus 287 ------Gg~v~~--------------------~~-----------------------~~~r~~g~lavsRalGd~~~k-- 315 (399)
|+.... ++ ...|+.+.+.++|.|||.++|
T Consensus 300 ~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~ 379 (493)
T KOG1323|consen 300 RNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVV 379 (493)
T ss_pred cChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeee
Confidence 221110 00 011445788999999998876
Q ss_pred -------cceeeeeeEEEEEecCC----CeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHH---HHHHHHHHHHHh
Q 015832 316 -------QWIIAEPETKIIRIKPE----YEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPM---LACKKLVDLSVS 381 (399)
Q Consensus 316 -------~~v~~~Pdi~~~~l~~~----~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~---~aa~~Lv~~A~~ 381 (399)
|+..+.|+++++++.+- ||++||+||||||+++|+|+..+++.++.+.+..+|. .+++.|+..|..
T Consensus 380 dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg 459 (493)
T KOG1323|consen 380 DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARG 459 (493)
T ss_pred cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcC
Confidence 77999999999998752 6899999999999999999999999998888877776 456666666652
Q ss_pred -------------CCCCCCeEEEEEEeC
Q 015832 382 -------------RGSVDDVSVMLIQLG 396 (399)
Q Consensus 382 -------------~gs~DNiTvIvi~l~ 396 (399)
.|+.|||||.||-|.
T Consensus 460 ~~k~rgWr~~n~~lgSgDDIsVfVIPL~ 487 (493)
T KOG1323|consen 460 QQKDRGWRMNNGGLGSGDDISVFVIPLK 487 (493)
T ss_pred ccCCCceeccCCCcCCCCceEEEEEecc
Confidence 267899999999884
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.92 E-value=9e-25 Score=229.95 Aligned_cols=241 Identities=28% Similarity=0.449 Sum_probs=213.9
Q ss_pred EEEeecCcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHccc
Q 015832 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTD 223 (399)
Q Consensus 144 ~~~~s~~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~~~~ 223 (399)
||++-..|+|..+.=+.....++.+ ...+.||++||-+......+....+..++.+++.....+ .+.|+++|+..+
T Consensus 524 ~Gv~~~~gqrnk~c~~~~~v~nf~~-~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~e---t~~mr~~fl~~~ 599 (1081)
T KOG0618|consen 524 YGVAGVSGQRNKVCSRAVWVENFFL-NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNE---TEQMRNTFLRLN 599 (1081)
T ss_pred eccchhcccccchhhhhhhhhhccc-CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccCh---HHHHHHHHHHHh
Confidence 8888999999888877776777654 456899999999999999999999999999998866422 333999999999
Q ss_pred hhhhhccccCCceeEEEEEECC--------eEEEEEeccccEEEEeCCeeEEcCCCC-CCCCHHHHHHHHHcCCceeccC
Q 015832 224 SEFLKEDVYGGSCCVTALIQNG--------TLVVSNAGDCRAVMSRGGLAEALTSDH-RPSREDEKSRIETMGGYVDLCH 294 (399)
Q Consensus 224 ~~l~~~~~~~GtT~v~~li~~~--------~l~vAnvGDsRa~l~r~g~~~~LT~DH-~~~~~~e~~Ri~~~Gg~v~~~~ 294 (399)
+++...+..-|..++.+.|..+ ++++||+|+|.++++|+|+-.++|+-. ...+++|.+||...+|+|...
T Consensus 600 rklg~~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed- 678 (1081)
T KOG0618|consen 600 RKLGEEGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITED- 678 (1081)
T ss_pred hhhhhhhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCC-
Confidence 9998887777888888887654 589999999999999999988887765 455999999999999999753
Q ss_pred CcccccCCccccccccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHH
Q 015832 295 GTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKK 374 (399)
Q Consensus 295 ~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~ 374 (399)
.++.|....+|++|.+...|+|.+.|+|....|++.|||||+++.++|++|+-+++++++|+ ..+|-.+|++
T Consensus 679 --~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn------~~dpL~AAkK 750 (1081)
T KOG0618|consen 679 --NKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRN------VEDPLLAAKK 750 (1081)
T ss_pred --CeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhc------CCchHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999999998 5799999999
Q ss_pred HHHHHHhCCCCCCeEEEEEEeCC
Q 015832 375 LVDLSVSRGSVDDVSVMLIQLGR 397 (399)
Q Consensus 375 Lv~~A~~~gs~DNiTvIvi~l~~ 397 (399)
|+++|..+|+.||++||||+|.+
T Consensus 751 L~d~AqSYgc~~nv~vlVv~l~~ 773 (1081)
T KOG0618|consen 751 LCDLAQSYGCAENVSVLVVRLNH 773 (1081)
T ss_pred HHHHHHhcccccCeeEEEEEeec
Confidence 99999999999999999999865
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-22 Score=189.09 Aligned_cols=211 Identities=20% Similarity=0.289 Sum_probs=147.6
Q ss_pred CCCCccEEEecccCCCCcceEEEEEcCCCCchH----HHHHHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHccchhhhh
Q 015832 154 EAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKA----AEFAAENLDKNILEEVLRRDI-EDQIEDAVKRGYLNTDSEFLK 228 (399)
Q Consensus 154 ~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~----a~~as~~l~~~l~~~~~~~~~-~~~i~~~l~~a~~~~~~~l~~ 228 (399)
...||+|++..+.. ..+.|||||+|||.- +..-++.|.++..+.....+. ..+...+|.++|..+-++ +
T Consensus 89 ~~GEDa~Fvss~~~----~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~--~ 162 (330)
T KOG1379|consen 89 KGGEDAWFVSSNPH----AIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ--K 162 (330)
T ss_pred CCCCcceeeccCcc----cceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc--C
Confidence 45689999987643 569999999998754 333344455555544443221 346888999998887654 2
Q ss_pred ccccCCceeEEEEEE--CCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCcccc
Q 015832 229 EDVYGGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVS 306 (399)
Q Consensus 229 ~~~~~GtT~v~~li~--~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavs 306 (399)
...-+++|++++++. +++|++||+|||-..++|+|+++.-|..+.. ++...++- .+.+. ...
T Consensus 163 ~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H-------------~FN~PyQL--s~~p~-~~~ 226 (330)
T KOG1379|consen 163 VPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH-------------YFNTPYQL--SSPPE-GYS 226 (330)
T ss_pred CCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee-------------ccCCceee--ccCCc-ccc
Confidence 234456677666666 8899999999999999999999998876521 11100000 00000 012
Q ss_pred ccccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhC----
Q 015832 307 RALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSR---- 382 (399)
Q Consensus 307 RalGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~---- 382 (399)
..++|.. -..+.+.++++++ |+||||||||||+|.++||++++..... ....+++..|++|+++|.++
T Consensus 227 ~~~~d~p------~~ad~~~~~v~~G-DvIilATDGlfDNl~e~~Il~il~~~~~-~~~~~lq~~A~~ia~~Ar~ls~d~ 298 (330)
T KOG1379|consen 227 SYISDVP------DSADVTSFDVQKG-DVIILATDGLFDNLPEKEILSILKGLDA-RGNLDLQVTAQKIAEKARELSRDP 298 (330)
T ss_pred ccccCCc------cccceEEEeccCC-CEEEEecccccccccHHHHHHHHHHhhc-cccccHHHHHHHHHHHHHHhccCc
Confidence 2344433 2567889999998 9999999999999999999999987422 13568999999999998752
Q ss_pred -------------------CCCCCeEEEEEE
Q 015832 383 -------------------GSVDDVSVMLIQ 394 (399)
Q Consensus 383 -------------------gs~DNiTvIvi~ 394 (399)
|..|||||||..
T Consensus 299 ~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 299 KFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred CcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 459999999975
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=1.7e-20 Score=173.46 Aligned_cols=180 Identities=22% Similarity=0.275 Sum_probs=106.0
Q ss_pred eecCcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhH--H-HHHHHHHHHHccc
Q 015832 147 YCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIED--Q-IEDAVKRGYLNTD 223 (399)
Q Consensus 147 ~s~~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~--~-i~~~l~~a~~~~~ 223 (399)
.+++|++..|||++.+...- +..+++|+||+||...++.+++.+++.+.+.+....... . .++.++.+...+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~----~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD----DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-TC----CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC----CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 36788999999999965553 246779999999999999999999999988887554311 1 2233333332222
Q ss_pred hh---------hhhccccCCceeEEEEEECCeEEEEEeccccEEE-EeCCeeEEcCCCCCCCCHHHHHHHHHcCCceecc
Q 015832 224 SE---------FLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVM-SRGGLAEALTSDHRPSREDEKSRIETMGGYVDLC 293 (399)
Q Consensus 224 ~~---------l~~~~~~~GtT~v~~li~~~~l~vAnvGDsRa~l-~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~ 293 (399)
.. ........+||++++++.++.++++|+||||+|+ .++|++..++.||+. +.. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~---~-------- 143 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYP---N-------- 143 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHH---H--------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhh---h--------
Confidence 11 1223446689999999999999999999999965 689999999999961 111 0
Q ss_pred CCcccccCCccccccccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHH-HHHHHhcccc
Q 015832 294 HGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQE-AIDIARPFCQ 361 (399)
Q Consensus 294 ~~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~e-i~~iv~~~~~ 361 (399)
.++.+..... ....++..+++.++ +.|+|||||||+.+...| +..++.+.+.
T Consensus 144 -----------~~~~~~~~~~----~~~~~~~~~~~~~~-d~ilL~SDG~~~~l~~~~~~~~~l~~~~~ 196 (212)
T PF13672_consen 144 -----------QTRSLTGDDP----EPDVQYGSIPLEEG-DVILLCSDGVWDNLRSYEDLEQFLKDLWN 196 (212)
T ss_dssp -----------CTTSCCHHCC----CTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH------
T ss_pred -----------hhhccCcccc----ccCCeEEEEEcCCC-CEEEEECcCccccCCCHHHHHHHhhhccc
Confidence 1222222110 01346777777877 888899999999998655 7777776433
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.76 E-value=7.5e-17 Score=146.87 Aligned_cols=175 Identities=17% Similarity=0.174 Sum_probs=129.2
Q ss_pred CCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHccchhhhhc-cc
Q 015832 153 REAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE-DV 231 (399)
Q Consensus 153 R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~~~~~~l~~~-~~ 231 (399)
....-|.|.+....++ ..+|+|+||||+...|.+++..+...+.+...... .+.+ .+..+++.+... ..
T Consensus 14 ~~~~GD~~~~~~~~~~---~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~---~~~~----~l~~~n~~l~~~~~~ 83 (193)
T smart00331 14 TQVGGDFYDVVKLPEG---RLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI---SLSQ----ILERLNRAIYENGED 83 (193)
T ss_pred HhcCccEEEEEEeCCC---eEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC---CHHH----HHHHHHHHHHhcCCC
Confidence 4667798877765433 68999999999999999999999888877655432 2333 333344444443 44
Q ss_pred cCCceeEEEEE--ECCeEEEEEeccccEEEEe-CCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCcccccc
Q 015832 232 YGGSCCVTALI--QNGTLVVSNAGDCRAVMSR-GGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRA 308 (399)
Q Consensus 232 ~~GtT~v~~li--~~~~l~vAnvGDsRa~l~r-~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsRa 308 (399)
..|+|++++++ ..++++++|+||+|+|+++ ++...+++.+. ++.
T Consensus 84 ~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~---------------------------------~~~ 130 (193)
T smart00331 84 GMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL---------------------------------GAP 130 (193)
T ss_pred CcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC---------------------------------Cce
Confidence 56899999888 6778999999999999999 55555555431 234
Q ss_pred ccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHH
Q 015832 309 LGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSV 380 (399)
Q Consensus 309 lGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~ 380 (399)
+|.... .++++..+++.++ |.|+|+||||||.++.+++.+++++. ...++++++++|++...
T Consensus 131 lG~~~~-----~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l~~~l~~~----~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 131 LGLEPD-----VEVDVRELTLEPG-DLLLLYTDGLTEARNPERLEELLEEL----LGSPPAEIAQRILEELL 192 (193)
T ss_pred eeeCCC-----CcceeEEEeeCCC-CEEEEECCCccccCChHHHHHHHHHh----cCCCHHHHHHHHHHHHh
Confidence 554331 2467888899998 88889999999999999999999873 23578888998888754
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.65 E-value=9.3e-15 Score=158.69 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=136.7
Q ss_pred CcCCCCCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHccchhhhhc
Q 015832 150 RGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE 229 (399)
Q Consensus 150 ~G~R~~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~~~~~~l~~~ 229 (399)
++.+..+.|.|.+....+| ..+++|+||+|+...|..++..+.+.+.+........+...+.+.+.+... .
T Consensus 561 k~g~~vsGD~y~~~~l~~g---~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~~~ai~~lN~~L~~~------~ 631 (764)
T TIGR02865 561 KDGELVSGDSYSFGKLSAG---KYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDREVAIKTVNSILSLR------S 631 (764)
T ss_pred CCCCcccCceEEEEEECCC---EEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC------C
Confidence 3447889999988765443 578999999998777778888777766655443322222222333322211 1
Q ss_pred cccCCceeEEEEEE--CCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCccccc
Q 015832 230 DVYGGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSR 307 (399)
Q Consensus 230 ~~~~GtT~v~~li~--~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsR 307 (399)
.....+|+..++++ .+++.++|+|+++.|+.|+|+++.++..+-|
T Consensus 632 ~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------------------------- 678 (764)
T TIGR02865 632 TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------------------------- 678 (764)
T ss_pred CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------------------
Confidence 22347898888885 6789999999999999999998888654422
Q ss_pred cccccccccceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHH-----HHHHHhccccCCCCCCHHHHHHHHHHHHHhC
Q 015832 308 ALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQE-----AIDIARPFCQSIDAPEPMLACKKLVDLSVSR 382 (399)
Q Consensus 308 alGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~e-----i~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~ 382 (399)
+|-.. ..+++....++.+| |+|||+|||+||..++++ +.+++++ ....+|+++++.|++++.++
T Consensus 679 -lGil~-----~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~~~~~~~~l~~~l~~----~~~~~p~ela~~Il~~a~~~ 747 (764)
T TIGR02865 679 -IGILD-----EVDVELVRKKLKNG-DLIVMVSDGVLEGEKEVEGKVLWLVRKLKE----TNTNDPEEIAEYLLEKAKEL 747 (764)
T ss_pred -eEecc-----CCccceEEEEeCCC-CEEEEECCCCCcCCcccccHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHh
Confidence 22111 02567778899998 899999999999876533 5666654 23468999999999999875
Q ss_pred C---CCCCeEEEEEEe
Q 015832 383 G---SVDDVSVMLIQL 395 (399)
Q Consensus 383 g---s~DNiTvIvi~l 395 (399)
. ..||+|++++++
T Consensus 748 ~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 748 RSGKIKDDMTVIVAKV 763 (764)
T ss_pred cCCCCCCCeEEEEEEe
Confidence 3 389999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.51 E-value=1.9e-12 Score=117.45 Aligned_cols=177 Identities=20% Similarity=0.211 Sum_probs=116.9
Q ss_pred cceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHccchhhhhccccCCceeEEEEEE--CCeEE
Q 015832 171 KQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQ--NGTLV 248 (399)
Q Consensus 171 ~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a~~~~~~~l~~~~~~~GtT~v~~li~--~~~l~ 248 (399)
+.++++|+|+.|....|.+.+..+...+......... +.+.+..+...+...+... ...+|++++++. .++++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~---p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~ 77 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD---PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLT 77 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS---HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEE
Confidence 4678999999997777777777777777766654432 3333333333332221111 356788877765 55699
Q ss_pred EEEeccccEEEEeC--CeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCccccccccccccccceeeeeeEEE
Q 015832 249 VSNAGDCRAVMSRG--GLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKI 326 (399)
Q Consensus 249 vAnvGDsRa~l~r~--g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~ 326 (399)
++|+|+++++++|+ +....+.....+ +|-..- .+.....
T Consensus 78 ~~~aG~~~~l~~~~~~~~~~~~~~~~~~----------------------------------lG~~~~-----~~~~~~~ 118 (193)
T PF07228_consen 78 YANAGHPPPLLLRPGGREIEQLESEGPP----------------------------------LGIFED-----IDYQEQE 118 (193)
T ss_dssp EEEESSSEEEEEETTCTEEEEETCSSBB----------------------------------CSSSCT-----TCEEEEE
T ss_pred EeCCCCCCEEEEeccccceeecccCccc----------------------------------eeeecc-----ccccceE
Confidence 99999999999998 344444332211 332211 2566778
Q ss_pred EEecCCCeEEEEECCccCCCCCHH-------HHHHHHhccccCCCCCCHHHHHHHHHHHHHhC---CCCCCeEEEEEEeC
Q 015832 327 IRIKPEYEFLILASDGLWDKVSNQ-------EAIDIARPFCQSIDAPEPMLACKKLVDLSVSR---GSVDDVSVMLIQLG 396 (399)
Q Consensus 327 ~~l~~~~d~LILaSDGlwd~ls~~-------ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~---gs~DNiTvIvi~l~ 396 (399)
+++.++ |.|+|+||||+|..+.+ ++.+++.+. ...++++.++.|++.+.+. ...||+|+|+++++
T Consensus 119 ~~l~~g-d~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 119 IQLEPG-DRLLLYTDGLFEALNEDGEFFGEERLLELLDEN----RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EE--TT-EEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH----TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEeccc-cEEEEeCCChhhccCCccchhHHHHHHHHHhhc----cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 899998 99999999999998544 445666541 2467999999999998874 46999999999975
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.34 E-value=2.3e-05 Score=78.79 Aligned_cols=188 Identities=18% Similarity=0.151 Sum_probs=119.8
Q ss_pred CCCccEEEecccCCCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhc--ChhHHHHHHHHHHHHccchhhhhcccc
Q 015832 155 AMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRR--DIEDQIEDAVKRGYLNTDSEFLKEDVY 232 (399)
Q Consensus 155 ~neD~~~~~~~~~g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~--~~~~~i~~~l~~a~~~~~~~l~~~~~~ 232 (399)
..-|.|-+..... +...++|.|..|-...|.+. ..+.....+.+... .....+-+.+.+++...... .
T Consensus 161 vGGD~yd~~~~~~---~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~l~~~n~~~~~~~~~------~ 230 (367)
T COG2208 161 VGGDYYDFIQLGE---KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADVLETLNRVLKQNLEE------D 230 (367)
T ss_pred cCCceEEEEEECC---cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHHHHHHHHHHHhcccC------C
Confidence 4457776654422 47899999999843333344 44444455544433 21333334444443333222 1
Q ss_pred CCceeEEEEEE--CCeEEEEEeccccEEEEeCCee---EEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCccccc
Q 015832 233 GGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLA---EALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSR 307 (399)
Q Consensus 233 ~GtT~v~~li~--~~~l~vAnvGDsRa~l~r~g~~---~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsR 307 (399)
.-+|...++++ .+.+.++|+|---+++++.+.. ..+. ....
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~----------------------------------~~g~ 276 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT----------------------------------ALGL 276 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc----------------------------------CCCc
Confidence 34566666665 5679999999999999986542 3322 2334
Q ss_pred cccccccccceeeeeeEEEEEecCCCeEEEEECCccCC-------CCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHH
Q 015832 308 ALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD-------KVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSV 380 (399)
Q Consensus 308 alGd~~~k~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd-------~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~ 380 (399)
.+|.... ....+....+++| |.|||.|||+.| .+..+...+++.+. ....+.++++.+.+...
T Consensus 277 piG~~~~-----~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~i~~~l~ 346 (367)
T COG2208 277 PIGLLPD-----YQYEVASLQLEPG-DLLVLYTDGVTEARNSDGEFFGLERLLKILGRL----LGQPAEEILEAILESLE 346 (367)
T ss_pred eeeecCC-----ccchheeEEecCC-CEEEEEcCCeeeeecCCccEecHHHHHHHHHHH----hCCCHHHHHHHHHHHHH
Confidence 4554432 3566778888986 999999999998 56777888888752 23578888888777766
Q ss_pred hC----CCCCCeEEEEEEeC
Q 015832 381 SR----GSVDDVSVMLIQLG 396 (399)
Q Consensus 381 ~~----gs~DNiTvIvi~l~ 396 (399)
+. .-.||+|++++++.
T Consensus 347 ~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 347 ELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred HhhCCccccCceEEEEEEec
Confidence 53 34788999999985
No 20
>KOG0260 consensus RNA polymerase II, large subunit [Transcription]
Probab=86.16 E-value=4.2 Score=46.17 Aligned_cols=7 Identities=57% Similarity=1.198 Sum_probs=2.8
Q ss_pred CCCcCCC
Q 015832 10 SPVFSPS 16 (399)
Q Consensus 10 ~~~~~~~ 16 (399)
||.+||-
T Consensus 1484 spsyspt 1490 (1605)
T KOG0260|consen 1484 SPSYSPT 1490 (1605)
T ss_pred CCCCCCC
Confidence 3444433
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=81.53 E-value=12 Score=36.39 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=22.7
Q ss_pred ceeEEEEEE--CCeEEEEEeccccEEEEeCCee
Q 015832 235 SCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLA 265 (399)
Q Consensus 235 tT~v~~li~--~~~l~vAnvGDsRa~l~r~g~~ 265 (399)
-|+..++++ .+++.++|+|-...++..++.+
T Consensus 227 ~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 227 FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 467777765 4569999999999886445444
No 22
>KOG0260 consensus RNA polymerase II, large subunit [Transcription]
Probab=78.75 E-value=12 Score=42.80 Aligned_cols=9 Identities=56% Similarity=0.962 Sum_probs=4.4
Q ss_pred CCCCcCCCC
Q 015832 9 NSPVFSPSS 17 (399)
Q Consensus 9 ~~~~~~~~~ 17 (399)
.||-|||.+
T Consensus 1448 ssp~~s~ts 1456 (1605)
T KOG0260|consen 1448 SSPGYSPTS 1456 (1605)
T ss_pred CCCCCCCCC
Confidence 445555444
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.50 E-value=58 Score=29.62 Aligned_cols=49 Identities=22% Similarity=0.408 Sum_probs=36.8
Q ss_pred CeEEEEECCccC-----------CCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhCC
Q 015832 333 YEFLILASDGLW-----------DKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRG 383 (399)
Q Consensus 333 ~d~LILaSDGlw-----------d~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~g 383 (399)
||-+++.|.|+| |++.++..=+.+.+-+. +..=|.+.|+.|+++-.+||
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D--~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWD--EFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCc--cccchHHHHHHHHHHHHhcC
Confidence 467779999998 56667777676665333 23458899999999999887
No 24
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=28.81 E-value=99 Score=18.60 Aligned_cols=22 Identities=23% Similarity=0.441 Sum_probs=17.3
Q ss_pred EEEEECCeEEEEEeccccEEEE
Q 015832 239 TALIQNGTLVVSNAGDCRAVMS 260 (399)
Q Consensus 239 ~~li~~~~l~vAnvGDsRa~l~ 260 (399)
+++-.++.+||+-.|..|+..+
T Consensus 7 vav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 7 VAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEETTSEEEEEECCCTEEEEE
T ss_pred EEEeCCCCEEEEECCCCEEEEC
Confidence 3445888999999999988754
No 25
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=27.55 E-value=1.7e+02 Score=24.71 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=43.8
Q ss_pred EECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 015832 338 LASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQL 395 (399)
Q Consensus 338 LaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~gs~DNiTvIvi~l 395 (399)
..||=+-|.++..++.+.++++..+..-.-.+..|+++.+..+.+- ..++.+-|.+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v 98 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKV 98 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEE
Confidence 5688889999999999999998777666678889999999988863 4455544444
No 26
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=26.90 E-value=1.3e+02 Score=24.81 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=41.4
Q ss_pred EECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhC-CCCCCeEEEEEE
Q 015832 338 LASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSR-GSVDDVSVMLIQ 394 (399)
Q Consensus 338 LaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~-gs~DNiTvIvi~ 394 (399)
-.+|-+-+.++..++.+.+.++.....-...+.+|+.|.+..+.. ...+.+++-|-+
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~~~~v~~v~v~v~K 99 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLEDYPKVSAIKVKVEK 99 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHhCCCceEEEEEEEC
Confidence 468888889999999999887655545557788899999988876 334444444433
No 27
>PF15449 Retinal: Retinal protein
Probab=26.89 E-value=1.7e+02 Score=33.57 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=11.1
Q ss_pred Ccccc-cCCcccccCCCCCCC
Q 015832 31 PEKTL-NLPLTHVKFSPSSSL 50 (399)
Q Consensus 31 ~~~~~-~~~~~~~~~~~~~~~ 50 (399)
.|+++ ++..+|++.-||.++
T Consensus 1028 ~ekR~~SpPsshr~aQPS~P~ 1048 (1287)
T PF15449_consen 1028 AEKRLPSPPSSHRPAQPSLPS 1048 (1287)
T ss_pred cccCCCCCCccCCCCCCCCCc
Confidence 35555 566677765554443
No 28
>cd01457 vWA_ORF176_type VWA ORF176 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most
Probab=24.53 E-value=1.4e+02 Score=26.92 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=14.8
Q ss_pred CeEEEEECCccCCCCCHHHHHHHH
Q 015832 333 YEFLILASDGLWDKVSNQEAIDIA 356 (399)
Q Consensus 333 ~d~LILaSDGlwd~ls~~ei~~iv 356 (399)
...||+.|||..+- .+++.+++
T Consensus 108 ~~~vIiiTDG~~~d--~~~~~~~i 129 (199)
T cd01457 108 GETFLVITDGAPDD--KDAVERVI 129 (199)
T ss_pred ceEEEEEcCCCCCc--HHHHHHHH
Confidence 37899999999863 44443333
No 29
>TIGR00525 folB dihydroneopterin aldolase. This model describes a bacterial dihydroneopterin aldolase, shown to form homo-octamers in E. coli. The equivalent activity is catalyzed by domains of larger folate biosynthesis proteins in other systems. The closely related parologous enzyme in E. coli, dihydroneopterin triphosphate epimerase, which is also homo-octameric, and dihydroneopterin aldolase domains of larger proteins, score below the trusted cutoff but may score well above the noise cutoff.
Probab=24.13 E-value=1.7e+02 Score=23.93 Aligned_cols=58 Identities=17% Similarity=0.066 Sum_probs=42.6
Q ss_pred EECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhCCC-CCCeEEEEEEe
Q 015832 338 LASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGS-VDDVSVMLIQL 395 (399)
Q Consensus 338 LaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~gs-~DNiTvIvi~l 395 (399)
-.+|.+-+.++..++.+.+..+..+..-...+..|+.+.+..+.... .+-+++-+-+.
T Consensus 41 ~~~D~l~~tidY~~v~~~i~~~~~~~~~~llE~la~~Ia~~i~~~~~~v~~v~v~i~Kp 99 (116)
T TIGR00525 41 AESDDLGDTVNYAELYSAIEEIVAEKPRDLIETVAYRIADRLFADFPQVQRVKVRVSKP 99 (116)
T ss_pred hccCCchhccCHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHCCCceEEEEEEEeC
Confidence 45888889999999999988765554455778889999988887633 55566555544
No 30
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=23.32 E-value=98 Score=22.77 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=23.4
Q ss_pred CCHHHHHHHHhccccCCCCCCHHHHHHHHHHH
Q 015832 347 VSNQEAIDIARPFCQSIDAPEPMLACKKLVDL 378 (399)
Q Consensus 347 ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~ 378 (399)
.+++||..+++.. ..+|.+++++|+.+
T Consensus 19 hse~eIya~L~ec-----nMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKEC-----NMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHh-----CCCHHHHHHHHHhc
Confidence 6889999999983 67999999999875
No 31
>PF05001 RNA_pol_Rpb1_R: RNA polymerase Rpb1 C-terminal repeat ; InterPro: IPR000684 RNA polymerase II (2.7.7.6 from EC) [, ] is one of the three forms of RNA polymerase that exist in eukaryotic nuclei. The C-terminal region of the largest subunit of this oligomeric enzyme consists of the tandem repeat of a conserved heptapeptide []. The number of repeats varies according to the species (for example there are 17 in Plasmodium, 26 in yeast, 44 in Drosophila, and 52 in mammals). The region containing these repeats is essential for the function of polymerase II. This repeated heptapeptide (called CT7n or CTD) is rich in hydroxyl groups. It probably projects out of the globular catalytic domain and may interact with the acidic activator domains of transcriptional regulatory proteins. It is also known to bind by intercalation to DNA. RNA polymerase II is activated by phosphorylation. The serine and threonine residues in the CT7n repeats are the target of such phosphorylation.; GO: 0003677 DNA binding, 0006366 transcription from RNA polymerase II promoter, 0005665 DNA-directed RNA polymerase II, core complex; PDB: 2L0I_B 2GHQ_C 2GHT_C.
Probab=23.01 E-value=37 Score=17.60 Aligned_cols=11 Identities=45% Similarity=0.800 Sum_probs=4.3
Q ss_pred cCCCCcCCCCc
Q 015832 8 SNSPVFSPSSS 18 (399)
Q Consensus 8 ~~~~~~~~~~~ 18 (399)
|.||.|+|.++
T Consensus 2 P~SP~ysPtSP 12 (14)
T PF05001_consen 2 PTSPGYSPTSP 12 (14)
T ss_dssp TTB---BTTB-
T ss_pred CCCCCCCccCC
Confidence 45677777653
No 32
>PRK11593 folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; Provisional
Probab=22.38 E-value=2.4e+02 Score=23.24 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=37.2
Q ss_pred EECCccCCCCCHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHhCC
Q 015832 338 LASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRG 383 (399)
Q Consensus 338 LaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~aa~~Lv~~A~~~g 383 (399)
-.+|-+-+.++..++.+.+.++..+..-...+.+|+.|.+..+..-
T Consensus 42 ~~~Ddl~~tidY~~v~~~I~~~~~~~~~~LlE~la~~ia~~i~~~~ 87 (119)
T PRK11593 42 AKSDDVADCLSYADIAETVISHVEGARFALVERVAEEVAELLLARF 87 (119)
T ss_pred ccccCHhhccCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHhhC
Confidence 5688899999999999999886655555678889999998887653
No 33
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=21.01 E-value=57 Score=25.00 Aligned_cols=20 Identities=30% Similarity=0.461 Sum_probs=14.6
Q ss_pred CCCeEEEEECCccCCCCCHHH
Q 015832 331 PEYEFLILASDGLWDKVSNQE 351 (399)
Q Consensus 331 ~~~d~LILaSDGlwd~ls~~e 351 (399)
.| +.|++++||+|=-+...-
T Consensus 26 ~G-~Rllva~nGv~lEv~r~W 45 (72)
T PF09436_consen 26 PG-HRLLVASNGVFLEVRRPW 45 (72)
T ss_pred CC-cEEEEecCcEEEEEechH
Confidence 45 778899999996654443
Done!