Query 015835
Match_columns 399
No_of_seqs 172 out of 920
Neff 3.6
Searched_HMMs 46136
Date Fri Mar 29 01:20:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015835.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015835hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552 Predicted alpha/beta h 99.1 5.3E-11 1.1E-15 115.3 4.2 78 19-96 177-256 (258)
2 KOG4391 Predicted alpha/beta h 98.9 8.2E-10 1.8E-14 106.7 4.8 73 23-95 210-285 (300)
3 PRK13604 luxD acyl transferase 98.7 5.1E-08 1.1E-12 96.6 9.5 68 10-77 177-247 (307)
4 PF00326 Peptidase_S9: Prolyl 98.7 3.7E-08 8E-13 87.8 6.4 73 23-95 131-212 (213)
5 PLN02298 hydrolase, alpha/beta 98.5 3.2E-07 6.9E-12 87.0 7.7 72 28-99 245-324 (330)
6 PRK10566 esterase; Provisional 98.4 6.5E-07 1.4E-11 80.7 7.3 69 23-93 174-249 (249)
7 COG1506 DAP2 Dipeptidyl aminop 98.4 6.4E-07 1.4E-11 94.7 7.1 75 21-95 538-619 (620)
8 COG1073 Hydrolases of the alph 98.4 1.2E-06 2.6E-11 78.1 7.4 73 21-93 218-298 (299)
9 TIGR02240 PHA_depoly_arom poly 98.3 1.8E-06 3.8E-11 79.7 8.3 68 26-94 199-268 (276)
10 PLN02652 hydrolase; alpha/beta 98.3 1.5E-06 3.2E-11 87.7 8.2 67 28-94 318-389 (395)
11 PLN02385 hydrolase; alpha/beta 98.3 2.4E-06 5.3E-11 82.4 8.7 67 28-94 273-347 (349)
12 PRK11071 esterase YqiA; Provis 98.3 9.5E-07 2.1E-11 79.9 5.1 54 33-90 135-189 (190)
13 PHA02857 monoglyceride lipase; 98.3 2.7E-06 5.9E-11 77.8 7.6 65 28-92 203-273 (276)
14 TIGR03611 RutD pyrimidine util 98.2 2.8E-06 6.1E-11 73.8 7.1 64 26-90 190-256 (257)
15 PF12695 Abhydrolase_5: Alpha/ 98.2 2.1E-06 4.6E-11 70.2 5.2 50 25-74 95-145 (145)
16 PRK10749 lysophospholipase L2; 98.2 4.9E-06 1.1E-10 80.0 7.8 65 28-92 253-329 (330)
17 PRK05371 x-prolyl-dipeptidyl a 98.2 6.7E-06 1.5E-10 89.8 9.5 98 22-122 443-550 (767)
18 TIGR03343 biphenyl_bphD 2-hydr 98.1 1.7E-05 3.7E-10 72.0 9.1 69 21-90 210-281 (282)
19 PRK07581 hypothetical protein; 98.1 2.3E-05 5E-10 74.9 10.2 69 25-94 266-338 (339)
20 TIGR02427 protocat_pcaD 3-oxoa 98.1 1.3E-05 2.9E-10 68.5 7.6 67 23-90 182-251 (251)
21 TIGR01738 bioH putative pimelo 98.0 2.3E-05 4.9E-10 67.0 7.2 64 25-89 179-245 (245)
22 PLN02824 hydrolase, alpha/beta 97.9 2.6E-05 5.7E-10 72.4 7.2 64 27-91 227-293 (294)
23 PRK05077 frsA fermentation/res 97.9 4.5E-05 9.9E-10 77.3 9.2 62 31-93 352-413 (414)
24 TIGR01836 PHA_synth_III_C poly 97.9 2.6E-05 5.6E-10 75.7 7.1 62 30-91 282-349 (350)
25 PRK14875 acetoin dehydrogenase 97.9 4.1E-05 9E-10 72.7 8.2 65 23-91 303-370 (371)
26 TIGR01249 pro_imino_pep_1 prol 97.9 0.00011 2.3E-09 69.7 10.6 65 27-93 240-306 (306)
27 PLN02578 hydrolase 97.8 6.6E-05 1.4E-09 73.2 8.9 67 23-90 285-353 (354)
28 KOG1455 Lysophospholipase [Lip 97.8 5.9E-05 1.3E-09 75.5 8.3 66 27-92 239-312 (313)
29 PRK03592 haloalkane dehalogena 97.8 4.5E-05 9.7E-10 70.9 6.5 66 28-93 222-290 (295)
30 PRK06489 hypothetical protein; 97.8 7.8E-05 1.7E-09 72.7 8.3 69 24-93 282-358 (360)
31 TIGR01607 PST-A Plasmodium sub 97.8 7.8E-05 1.7E-09 72.7 8.1 57 34-90 270-331 (332)
32 TIGR03056 bchO_mg_che_rel puta 97.8 7.5E-05 1.6E-09 66.8 7.1 62 28-90 214-278 (278)
33 PLN02679 hydrolase, alpha/beta 97.7 8E-05 1.7E-09 73.0 7.8 66 25-91 283-356 (360)
34 PRK08775 homoserine O-acetyltr 97.7 6.8E-05 1.5E-09 72.4 7.0 64 30-93 273-340 (343)
35 KOG2551 Phospholipase/carboxyh 97.7 7E-05 1.5E-09 72.2 6.7 79 18-97 145-225 (230)
36 PRK00870 haloalkane dehalogena 97.7 7.9E-05 1.7E-09 69.8 6.4 64 28-92 233-301 (302)
37 TIGR01392 homoserO_Ac_trn homo 97.6 0.00018 3.8E-09 69.9 8.1 65 26-90 280-351 (351)
38 PLN02894 hydrolase, alpha/beta 97.6 0.00021 4.6E-09 71.8 8.6 73 25-98 316-391 (402)
39 KOG1454 Predicted hydrolase/ac 97.6 0.00021 4.6E-09 70.8 8.4 70 23-93 252-325 (326)
40 TIGR01250 pro_imino_pep_2 prol 97.6 0.00023 5E-09 62.6 7.6 65 24-90 221-288 (288)
41 PF01738 DLH: Dienelactone hyd 97.6 0.00025 5.4E-09 63.9 7.5 69 25-93 136-218 (218)
42 PRK10349 carboxylesterase BioH 97.5 0.0002 4.4E-09 64.9 6.8 67 24-91 186-255 (256)
43 PLN03087 BODYGUARD 1 domain co 97.5 0.00022 4.8E-09 74.6 7.9 59 32-91 416-478 (481)
44 PLN02965 Probable pheophorbida 97.5 0.00027 5.8E-09 64.7 7.5 62 30-92 189-253 (255)
45 PRK11460 putative hydrolase; P 97.5 0.00027 5.8E-09 65.7 7.3 62 32-95 146-211 (232)
46 PF02230 Abhydrolase_2: Phosph 97.5 0.00026 5.6E-09 64.3 6.8 58 34-93 155-216 (216)
47 PF05448 AXE1: Acetyl xylan es 97.5 0.00022 4.8E-09 70.6 6.8 72 21-92 249-320 (320)
48 COG2267 PldB Lysophospholipase 97.5 0.00028 6.2E-09 68.8 7.4 67 28-94 222-296 (298)
49 PRK00175 metX homoserine O-ace 97.5 0.00031 6.8E-09 69.5 7.8 67 26-92 301-374 (379)
50 PRK10673 acyl-CoA esterase; Pr 97.5 0.00035 7.5E-09 62.5 7.1 61 30-91 191-254 (255)
51 PRK06765 homoserine O-acetyltr 97.4 0.00073 1.6E-08 68.5 9.6 67 25-91 314-387 (389)
52 PRK05855 short chain dehydroge 97.4 0.00023 5E-09 71.4 5.6 62 31-93 230-293 (582)
53 PLN02442 S-formylglutathione h 97.4 0.00024 5.2E-09 67.9 5.4 71 22-92 205-280 (283)
54 COG1647 Esterase/lipase [Gener 97.3 0.00031 6.8E-09 68.2 5.1 64 27-90 174-242 (243)
55 PLN02511 hydrolase 97.2 0.00041 8.9E-09 69.3 5.2 72 23-95 287-368 (388)
56 PRK11126 2-succinyl-6-hydroxy- 97.2 0.0011 2.3E-08 59.1 7.2 60 25-91 179-241 (242)
57 PF03959 FSH1: Serine hydrolas 97.2 0.0004 8.8E-09 63.8 4.1 55 30-84 157-211 (212)
58 PF12697 Abhydrolase_6: Alpha/ 97.1 0.00079 1.7E-08 56.3 5.4 50 25-75 167-217 (228)
59 PF00561 Abhydrolase_1: alpha/ 97.1 0.001 2.2E-08 57.4 5.9 51 25-76 166-217 (230)
60 PLN03084 alpha/beta hydrolase 97.1 0.0017 3.6E-08 65.8 8.1 58 31-90 322-382 (383)
61 TIGR03695 menH_SHCHC 2-succiny 97.1 0.0015 3.3E-08 55.5 6.6 63 25-89 185-250 (251)
62 PRK07868 acyl-CoA synthetase; 97.1 0.0011 2.5E-08 73.7 7.3 68 29-96 292-365 (994)
63 PLN02211 methyl indole-3-aceta 97.0 0.0024 5.2E-08 60.4 8.0 61 31-92 207-270 (273)
64 KOG2984 Predicted hydrolase [G 97.0 0.0012 2.7E-08 64.1 5.5 75 16-91 199-275 (277)
65 PRK03204 haloalkane dehalogena 97.0 0.0019 4.1E-08 61.0 6.7 55 34-89 227-285 (286)
66 PRK10115 protease 2; Provision 97.0 0.0014 3E-08 71.0 6.5 74 22-95 593-678 (686)
67 COG0400 Predicted esterase [Ge 96.9 0.002 4.3E-08 60.8 6.6 59 33-93 145-206 (207)
68 PLN02872 triacylglycerol lipas 96.9 0.0042 9.1E-08 63.3 9.4 66 29-94 318-391 (395)
69 PF10142 PhoPQ_related: PhoPQ- 96.9 0.0027 5.9E-08 64.8 7.5 75 22-97 250-325 (367)
70 KOG2100 Dipeptidyl aminopeptid 96.7 0.0037 8.1E-08 68.8 7.0 76 22-97 669-752 (755)
71 PF08386 Abhydrolase_4: TAP-li 96.6 0.01 2.2E-07 49.6 7.5 59 33-92 33-94 (103)
72 COG0596 MhpC Predicted hydrola 96.5 0.011 2.4E-07 48.9 7.4 64 26-89 213-279 (282)
73 PRK10985 putative hydrolase; P 96.5 0.0044 9.5E-08 59.8 5.6 70 24-94 245-322 (324)
74 PF08840 BAAT_C: BAAT / Acyl-C 96.4 0.0097 2.1E-07 55.2 7.0 66 29-94 110-212 (213)
75 KOG3043 Predicted hydrolase re 96.4 0.013 2.9E-07 57.1 7.9 67 27-93 157-241 (242)
76 TIGR01849 PHB_depoly_PhaZ poly 96.3 0.0044 9.4E-08 64.1 4.7 62 30-91 333-405 (406)
77 TIGR02821 fghA_ester_D S-formy 96.3 0.0096 2.1E-07 56.3 6.5 69 24-92 199-274 (275)
78 PLN02980 2-oxoglutarate decarb 96.2 0.0096 2.1E-07 70.5 7.5 67 26-93 1560-1640(1655)
79 TIGR01839 PHA_synth_II poly(R) 96.2 0.0061 1.3E-07 65.5 5.3 47 29-75 436-482 (560)
80 COG3208 GrsT Predicted thioest 96.0 0.031 6.7E-07 54.8 8.7 83 1-89 149-233 (244)
81 TIGR01838 PHA_synth_I poly(R)- 95.8 0.013 2.8E-07 62.4 5.4 48 27-74 408-455 (532)
82 COG0429 Predicted hydrolase of 95.8 0.0083 1.8E-07 61.1 3.8 74 21-94 261-342 (345)
83 PF05728 UPF0227: Uncharacteri 95.8 0.024 5.3E-07 52.5 6.5 55 33-90 133-187 (187)
84 KOG2382 Predicted alpha/beta h 95.6 0.024 5.2E-07 57.2 6.1 61 31-92 250-313 (315)
85 KOG4667 Predicted esterase [Li 95.5 0.022 4.8E-07 55.9 5.5 46 33-79 198-244 (269)
86 KOG1838 Alpha/beta hydrolase [ 95.5 0.032 6.9E-07 58.1 6.6 82 10-93 293-389 (409)
87 COG3243 PhaC Poly(3-hydroxyalk 95.2 0.035 7.6E-07 58.3 6.1 68 29-96 325-403 (445)
88 COG0412 Dienelactone hydrolase 95.2 0.061 1.3E-06 51.1 7.1 65 30-94 154-235 (236)
89 PF03583 LIP: Secretory lipase 95.0 0.058 1.3E-06 52.6 6.7 63 34-97 219-286 (290)
90 PF05705 DUF829: Eukaryotic pr 94.4 0.061 1.3E-06 49.7 4.8 57 33-89 177-240 (240)
91 COG3458 Acetyl esterase (deace 93.7 0.14 3.1E-06 51.7 6.2 70 24-94 249-319 (321)
92 PF08538 DUF1749: Protein of u 93.6 0.03 6.6E-07 56.2 1.3 65 26-90 224-303 (303)
93 TIGR03100 hydr1_PEP hydrolase, 93.4 0.13 2.9E-06 48.6 5.3 63 28-90 201-273 (274)
94 TIGR01840 esterase_phb esteras 93.1 0.08 1.7E-06 48.0 3.0 29 34-62 168-196 (212)
95 KOG4178 Soluble epoxide hydrol 92.6 0.32 6.9E-06 49.5 6.8 63 30-92 254-320 (322)
96 PF02129 Peptidase_S15: X-Pro 92.4 0.26 5.6E-06 46.5 5.7 53 21-74 215-271 (272)
97 COG2945 Predicted hydrolase of 91.8 0.29 6.2E-06 47.2 5.1 60 29-90 144-205 (210)
98 COG2021 MET2 Homoserine acetyl 91.0 0.7 1.5E-05 47.9 7.3 68 24-91 296-367 (368)
99 PRK10162 acetyl esterase; Prov 90.9 0.48 1E-05 46.2 5.8 59 34-94 248-317 (318)
100 PF06821 Ser_hydrolase: Serine 90.7 0.59 1.3E-05 42.5 5.9 56 33-90 113-170 (171)
101 KOG4409 Predicted hydrolase/ac 89.5 0.97 2.1E-05 46.8 6.8 67 25-92 292-364 (365)
102 COG4287 PqaA PhoPQ-activated p 89.2 0.43 9.3E-06 50.2 4.1 73 24-97 314-392 (507)
103 KOG2112 Lysophospholipase [Lip 88.7 0.58 1.3E-05 45.0 4.4 56 34-91 144-203 (206)
104 KOG3253 Predicted alpha/beta h 87.8 2.1 4.6E-05 47.5 8.3 87 18-104 283-390 (784)
105 PF07519 Tannase: Tannase and 87.8 0.84 1.8E-05 48.0 5.3 63 35-97 354-432 (474)
106 PRK04940 hypothetical protein; 86.6 1.9 4.1E-05 40.6 6.3 51 37-90 127-178 (180)
107 PF09752 DUF2048: Uncharacteri 86.3 1.2 2.6E-05 45.9 5.2 57 33-90 288-347 (348)
108 PLN00021 chlorophyllase 85.8 0.78 1.7E-05 45.5 3.6 45 32-76 187-242 (313)
109 PF10605 3HBOH: 3HB-oligomer h 85.6 1.2 2.7E-05 49.0 5.2 44 32-75 552-604 (690)
110 PF02273 Acyl_transf_2: Acyl t 85.5 2.3 4.9E-05 42.9 6.5 52 25-76 186-239 (294)
111 PF07859 Abhydrolase_3: alpha/ 85.2 1.2 2.6E-05 39.3 4.2 50 23-74 154-208 (211)
112 COG3545 Predicted esterase of 84.1 2.3 5E-05 40.4 5.7 41 33-75 116-157 (181)
113 COG1505 Serine proteases of th 84.0 2.5 5.4E-05 46.6 6.6 73 21-93 565-647 (648)
114 COG4099 Predicted peptidase [G 83.6 0.62 1.3E-05 47.9 1.8 58 34-91 315-384 (387)
115 PF00975 Thioesterase: Thioest 79.4 4.2 9.1E-05 36.3 5.4 58 34-92 168-228 (229)
116 PF06850 PHB_depo_C: PHB de-po 78.6 2.9 6.2E-05 40.4 4.3 58 34-91 134-201 (202)
117 PF06500 DUF1100: Alpha/beta h 78.3 2.5 5.4E-05 44.4 4.1 61 31-93 349-410 (411)
118 KOG2281 Dipeptidyl aminopeptid 75.2 4.4 9.6E-05 45.4 5.1 66 26-91 791-866 (867)
119 PF10503 Esterase_phd: Esteras 74.3 2.9 6.3E-05 40.0 3.1 29 34-62 169-197 (220)
120 COG0657 Aes Esterase/lipase [L 70.3 8 0.00017 37.1 5.1 65 24-91 234-309 (312)
121 TIGR00976 /NonD putative hydro 65.4 14 0.00029 39.1 6.0 71 24-96 222-307 (550)
122 COG3571 Predicted hydrolase of 63.4 9.9 0.00021 36.6 4.1 51 22-75 131-182 (213)
123 KOG1551 Uncharacterized conser 60.8 17 0.00036 37.4 5.4 55 37-92 309-366 (371)
124 COG2868 Predicted ribosomal pr 54.7 20 0.00044 31.6 4.3 42 208-252 60-101 (109)
125 PF06057 VirJ: Bacterial virul 53.1 33 0.00071 32.9 5.7 60 24-90 128-190 (192)
126 COG4757 Predicted alpha/beta h 51.8 25 0.00053 35.5 4.8 64 26-89 208-280 (281)
127 KOG2624 Triglyceride lipase-ch 51.6 27 0.00059 36.7 5.4 68 26-93 324-399 (403)
128 PF05677 DUF818: Chlamydia CHL 49.8 56 0.0012 34.3 7.2 75 16-93 275-364 (365)
129 PF01674 Lipase_2: Lipase (cla 49.4 31 0.00067 33.2 5.0 61 34-94 1-71 (219)
130 PF06342 DUF1057: Alpha/beta h 49.3 51 0.0011 33.7 6.7 65 4-68 163-246 (297)
131 PRK10439 enterobactin/ferric e 48.8 31 0.00068 35.8 5.3 56 35-94 350-408 (411)
132 PF11339 DUF3141: Protein of u 42.8 18 0.00039 39.8 2.5 25 29-53 292-316 (581)
133 PF10230 DUF2305: Uncharacteri 41.4 1.2E+02 0.0027 29.3 7.8 65 4-70 193-258 (266)
134 PF13887 MRF_C1: Myelin gene r 36.4 22 0.00048 26.0 1.4 12 229-240 4-15 (36)
135 COG4188 Predicted dienelactone 35.3 19 0.0004 37.7 1.2 49 28-76 245-296 (365)
136 PRK14285 chaperone protein Dna 31.4 45 0.00097 34.1 3.2 34 209-246 325-358 (365)
137 KOG2521 Uncharacterized conser 30.2 1.2E+02 0.0026 31.6 6.0 67 33-99 224-297 (350)
138 PRK14553 hypothetical protein; 27.8 89 0.0019 26.8 4.0 42 208-252 59-100 (108)
139 PF15603 Imm45: Immunity prote 25.8 1.1E+02 0.0024 25.7 4.0 61 186-247 7-77 (82)
140 PF06028 DUF915: Alpha/beta hy 24.8 88 0.0019 30.8 3.8 56 34-89 184-252 (255)
141 PF11144 DUF2920: Protein of u 23.0 95 0.0021 33.0 3.9 36 34-69 293-331 (403)
142 PRK10252 entF enterobactin syn 22.3 1.9E+02 0.004 33.2 6.2 61 32-93 1234-1294(1296)
143 PF03403 PAF-AH_p_II: Platelet 22.0 1.8E+02 0.0039 30.0 5.6 91 5-97 242-363 (379)
144 smart00726 UIM Ubiquitin-inter 21.6 62 0.0013 21.8 1.4 20 230-249 2-21 (26)
145 cd06321 PBP1_ABC_sugar_binding 20.4 4.8E+02 0.01 23.6 7.5 64 27-91 75-148 (271)
No 1
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.10 E-value=5.3e-11 Score=115.32 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=66.5
Q ss_pred CCCCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCce-EEEecCCCCCC-ChHHHHHHHHHHHHHhcCCC
Q 015835 19 FDITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKN-IIKFEGDHNSP-RPQFYFDSINIFFHNVLQPP 96 (399)
Q Consensus 19 FdI~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKq-L~ifeGgHNd~-rpqeY~e~V~~FL~k~Lq~p 96 (399)
|.++.+..++.|+.++||+|||||++|++||++|+.+||++|+++.+ +|+.-++|++. +.++|++.+..|+...++..
T Consensus 177 ~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 177 YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHhcccC
Confidence 66677777999999999999999999999999999999999999855 45444568775 67899999999999877654
No 2
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.93 E-value=8.2e-10 Score=106.66 Aligned_cols=73 Identities=22% Similarity=0.457 Sum_probs=65.6
Q ss_pred CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCC-CCCCCh-HHHHHHHHHHHHHhcCC
Q 015835 23 DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSPRP-QFYFDSINIFFHNVLQP 95 (399)
Q Consensus 23 DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGg-HNd~rp-qeY~e~V~~FL~k~Lq~ 95 (399)
.+.....+++|++|.|||.|.+|++|||-|.++||+.|+. .|++..||+| ||+.+- +.||+.|.+||.+....
T Consensus 210 ~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 210 KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhccC
Confidence 4667788899999999999999999999999999999998 6899999876 999875 56999999999987664
No 3
>PRK13604 luxD acyl transferase; Provisional
Probab=98.72 E-value=5.1e-08 Score=96.60 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=56.1
Q ss_pred HHHHHHHhCCCCC-CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhC-CCceEEEecCC-CCCCC
Q 015835 10 RKAIQKKAKFDIT-DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYA-GDKNIIKFEGD-HNSPR 77 (399)
Q Consensus 10 r~~IKkrAGFdI~-DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAak-gpKqL~ifeGg-HNd~r 77 (399)
+.+++....+++. ..+|++.++++++|+|||||++|++||++++++||++++ ++|++++++|+ |....
T Consensus 177 ~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 177 EVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 3444433344445 689999999999999999999999999999999999997 59999999996 86543
No 4
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.67 E-value=3.7e-08 Score=87.85 Aligned_cols=73 Identities=27% Similarity=0.451 Sum_probs=60.3
Q ss_pred CCChHHHhcc--CCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC-CCCCCCh---HHHHHHHHHHHHHhc
Q 015835 23 DLNTIKVAKS--CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRP---QFYFDSINIFFHNVL 93 (399)
Q Consensus 23 DVsPI~~Vkk--I~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG-gHNd~rp---qeY~e~V~~FL~k~L 93 (399)
..+|+..+.+ +++|+||+||++|..||+.++.+||+++.. +.++++++| +|....+ ..+++++.+||+++|
T Consensus 131 ~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 131 ELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred hhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 4567777888 899999999999999999999999987775 568888888 5854433 358899999999998
Q ss_pred CC
Q 015835 94 QP 95 (399)
Q Consensus 94 q~ 95 (399)
+.
T Consensus 211 ~~ 212 (213)
T PF00326_consen 211 KK 212 (213)
T ss_dssp T-
T ss_pred CC
Confidence 74
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.49 E-value=3.2e-07 Score=87.03 Aligned_cols=72 Identities=21% Similarity=0.305 Sum_probs=59.1
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCC-CCCC--Ch----HHHHHHHHHHHHHhcCCCCCC
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSP--RP----QFYFDSINIFFHNVLQPPEDE 99 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGg-HNd~--rp----qeY~e~V~~FL~k~Lq~p~d~ 99 (399)
..+.++++|+|||||++|.+||++++++||+.++. .+++.+++|+ |.-. .+ +.+++.|.+||.+.+++...+
T Consensus 245 ~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 245 KKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred HhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 34567899999999999999999999999999876 5899999984 8632 23 457888999999998766543
No 6
>PRK10566 esterase; Provisional
Probab=98.41 E-value=6.5e-07 Score=80.70 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=54.2
Q ss_pred CCChHHHhccC-CCCEEEEEeCCCCeeChHHHHHHHHHhCCC-----ceEEEecC-CCCCCChHHHHHHHHHHHHHhc
Q 015835 23 DLNTIKVAKSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGD-----KNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 23 DVsPI~~VkkI-~vPILFIHGt~D~fVPpehSerLYEAakgp-----KqL~ifeG-gHNd~rpqeY~e~V~~FL~k~L 93 (399)
++++...+.++ .+|+|||||++|.+||+.++++|+++++.. .++..++| +|.-. ...++.+.+||++++
T Consensus 174 ~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 174 EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--PEALDAGVAFFRQHL 249 (249)
T ss_pred hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--HHHHHHHHHHHHhhC
Confidence 34555667775 799999999999999999999999988762 35666788 57532 457899999999764
No 7
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.37 E-value=6.4e-07 Score=94.69 Aligned_cols=75 Identities=23% Similarity=0.359 Sum_probs=64.4
Q ss_pred CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCC-CCCCChH---HHHHHHHHHHHHhc
Q 015835 21 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNSPRPQ---FYFDSINIFFHNVL 93 (399)
Q Consensus 21 I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGg-HNd~rpq---eY~e~V~~FL~k~L 93 (399)
+.+.+|+..+.++++|+|||||+.|.-||.+|+++||++++. +.++++|++. |.-.+++ ..++.+..||.+++
T Consensus 538 ~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 538 YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 788999999999999999999999999999999999998875 5689999985 7555443 47788899999887
Q ss_pred CC
Q 015835 94 QP 95 (399)
Q Consensus 94 q~ 95 (399)
+.
T Consensus 618 ~~ 619 (620)
T COG1506 618 KQ 619 (620)
T ss_pred cC
Confidence 53
No 8
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.35 E-value=1.2e-06 Score=78.06 Aligned_cols=73 Identities=22% Similarity=0.350 Sum_probs=58.9
Q ss_pred CCCCChHHHhccCC-CCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecC-CCCCC---Ch--HHHHHHHHHHHHHh
Q 015835 21 ITDLNTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHNSP---RP--QFYFDSINIFFHNV 92 (399)
Q Consensus 21 I~DVsPI~~VkkI~-vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeG-gHNd~---rp--qeY~e~V~~FL~k~ 92 (399)
+..+++...+.++. +|+|++||..|.+||..+++.+|+++.+ ++.++.+++ +|+.. .+ ..+++.+..||.+.
T Consensus 218 ~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 218 LLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 44455555566655 8999999999999999999999999999 888888865 58765 22 26999999999886
Q ss_pred c
Q 015835 93 L 93 (399)
Q Consensus 93 L 93 (399)
+
T Consensus 298 l 298 (299)
T COG1073 298 L 298 (299)
T ss_pred c
Confidence 5
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.33 E-value=1.8e-06 Score=79.66 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=57.5
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCC--CChHHHHHHHHHHHHHhcC
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd--~rpqeY~e~V~~FL~k~Lq 94 (399)
....++++.+|+|||+|++|.+||++++++|++.++. .+++++++||.- .+++++.+.|.+||.+..+
T Consensus 199 ~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 199 SIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIIDDGHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred hhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEcCCCchhhccHHHHHHHHHHHHHHhhh
Confidence 4466788999999999999999999999999988865 567778999964 4678899999999987543
No 10
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.32 E-value=1.5e-06 Score=87.67 Aligned_cols=67 Identities=24% Similarity=0.350 Sum_probs=57.5
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCC-CC---CCChHHHHHHHHHHHHHhcC
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HN---SPRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGg-HN---d~rpqeY~e~V~~FL~k~Lq 94 (399)
..++++++|+|+|||++|.+||+++++++|+.... .|++++++|+ |. ...++++++.|.+||...+.
T Consensus 318 ~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 318 RNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred hhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 34567899999999999999999999999999776 5899999996 74 23567899999999998774
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.30 E-value=2.4e-06 Score=82.41 Aligned_cols=67 Identities=21% Similarity=0.312 Sum_probs=54.9
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecC-CCCCC--ChHH----HHHHHHHHHHHhcC
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHNSP--RPQF----YFDSINIFFHNVLQ 94 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeG-gHNd~--rpqe----Y~e~V~~FL~k~Lq 94 (399)
..+.++++|+|||||.+|.+||+.++++||+.++. .+++++++| +|.-. .+.+ +++.|.+||.+++.
T Consensus 273 ~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 273 MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 34567899999999999999999999999999875 589999997 48532 4443 77889999988764
No 12
>PRK11071 esterase YqiA; Provisional
Probab=98.28 E-value=9.5e-07 Score=79.92 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=46.8
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CCCCChHHHHHHHHHHHH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFH 90 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HNd~rpqeY~e~V~~FL~ 90 (399)
..+|+++|||++|++||++++.++|+.+ .+++++|| |+.....+|++.|..||.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 7788999999999999999999999965 45577875 887766889999999985
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=98.26 E-value=2.7e-06 Score=77.82 Aligned_cols=65 Identities=14% Similarity=0.248 Sum_probs=54.2
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC--C---hHHHHHHHHHHHHHh
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP--R---PQFYFDSINIFFHNV 92 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~--r---pqeY~e~V~~FL~k~ 92 (399)
+.++++++|+|+|||++|.+||++++++|++.++..+++.+++| +|.-. + ..+.++.|.+||.+.
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999999877789999987 68532 2 245888889999875
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.24 E-value=2.8e-06 Score=73.85 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=52.5
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEec-CCCCC--CChHHHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFE-GDHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ife-GgHNd--~rpqeY~e~V~~FL~ 90 (399)
....++++++|+|||||++|.++|+++++++++.++.. +++.++ |||.. ..++.+.+.|.+||+
T Consensus 190 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 190 VSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred cHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 34567789999999999999999999999999987654 566676 47853 467789999999985
No 15
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.21 E-value=2.1e-06 Score=70.24 Aligned_cols=50 Identities=28% Similarity=0.472 Sum_probs=44.2
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HN 74 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HN 74 (399)
.....+++.++|+|||||++|.++|+++.+++|++++.++++++++|+ |+
T Consensus 95 ~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 95 PDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp SGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred cchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 335677788999999999999999999999999999999999999985 75
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=98.17 E-value=4.9e-06 Score=80.04 Aligned_cols=65 Identities=22% Similarity=0.288 Sum_probs=52.1
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC------CceEEEecC-CCCCC--C---hHHHHHHHHHHHHHh
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG------DKNIIKFEG-DHNSP--R---PQFYFDSINIFFHNV 92 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg------pKqL~ifeG-gHNd~--r---pqeY~e~V~~FL~k~ 92 (399)
..+.++++|+|||||++|.+||+..++++++.++. .+++++++| +|.-. . .+.+++.|..||.++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 44567899999999999999999999999987642 468999998 58422 2 355889999999764
No 17
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.16 E-value=6.7e-06 Score=89.83 Aligned_cols=98 Identities=20% Similarity=0.284 Sum_probs=74.0
Q ss_pred CCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCCCCCC---ChHHHHHHHHHHHHHhcCC
Q 015835 22 TDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSP---RPQFYFDSINIFFHNVLQP 95 (399)
Q Consensus 22 ~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGgHNd~---rpqeY~e~V~~FL~k~Lq~ 95 (399)
.+.+++..+.++++|+|+|||..|.+|++.++.++|++++. +++||+.+|+|... ....|.+.+..||..+|..
T Consensus 443 ~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 443 DDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred HhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchhHHHHHHHHHHHHHhcccc
Confidence 45688899999999999999999999999999999998853 78999989999543 3356889999999998764
Q ss_pred CCC----CcCCccccccccccCCCCchhhhh
Q 015835 96 PED----EVGPTLIGTMHDYFGKGNLSTLHE 122 (399)
Q Consensus 96 p~d----~v~~~~~~~~~~~~~~~~~~s~~~ 122 (399)
... +....+ .++..+.+.|.+..+
T Consensus 523 ~~ng~~~~~pv~i---~~~~~g~~~W~~~~~ 550 (767)
T PRK05371 523 IDNGVENELPAVI---WQDNTTPQTWHKEAD 550 (767)
T ss_pred CCCCcccCCcceE---EEccCCCCceEecCC
Confidence 321 122223 222345577876544
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.09 E-value=1.7e-05 Score=72.04 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=56.6
Q ss_pred CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHH
Q 015835 21 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 21 I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~ 90 (399)
+...+....++++++|+|+|+|++|.+||+.+++++++..+ ..+++.+++ ||.. .++..+.+.|..||.
T Consensus 210 ~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 210 LSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred cccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 34445566788999999999999999999999999988775 467778876 6964 467788899999986
No 19
>PRK07581 hypothetical protein; Validated
Probab=98.08 E-value=2.3e-05 Score=74.93 Aligned_cols=69 Identities=10% Similarity=0.075 Sum_probs=57.9
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC--CCCC--CChHHHHHHHHHHHHHhcC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHNS--PRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG--gHNd--~rpqeY~e~V~~FL~k~Lq 94 (399)
+....++++++|+|+|||++|.++|+.+++.+.+..++ .+++++++ ||.. ..+..+...|..||++++.
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 45677888999999999999999999999999887755 57888886 6854 4677899999999998763
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.07 E-value=1.3e-05 Score=68.49 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=53.6
Q ss_pred CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEec-CCCCC--CChHHHHHHHHHHHH
Q 015835 23 DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFE-GDHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 23 DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ife-GgHNd--~rpqeY~e~V~~FL~ 90 (399)
+.+..+.++++++|+|+|||.+|.++|++..+.+++.++ ..+++.++ |+|.. ..++.+.+.|.+||.
T Consensus 182 ~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 182 DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 344556778899999999999999999999999988875 45778887 46854 467778888888873
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.97 E-value=2.3e-05 Score=67.04 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=52.4
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFF 89 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL 89 (399)
+....++++++|+|+|||++|.+||++..+.+.+..+ ..+++.++| ||.- ..++++.+.|.+|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 3445678899999999999999999999999987765 567888875 6964 46778888888885
No 22
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.92 E-value=2.6e-05 Score=72.38 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=52.3
Q ss_pred HHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 27 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
...++++.+|+|||+|++|.++|.++++++.+ .....+++.++| ||.- .+++++.+.|..||.+
T Consensus 227 ~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 227 EELLPAVKCPVLIAWGEKDPWEPVELGRAYAN-FDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHHHhhcCCCeEEEEecCCCCCChHHHHHHHh-cCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999655 444467888876 6854 4678899999999975
No 23
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.90 E-value=4.5e-05 Score=77.28 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=53.9
Q ss_pred ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHHhc
Q 015835 31 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 31 kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k~L 93 (399)
+++++|+|+|||++|.+||+++++.|.+..+ ..+++.+++.|+...+....+.|..||.+.+
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999998876664 5678889998777788889999999998865
No 24
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.90 E-value=2.6e-05 Score=75.71 Aligned_cols=62 Identities=19% Similarity=0.242 Sum_probs=53.6
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCCCCCC-----ChHHHHHHHHHHHHH
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGDHNSP-----RPQFYFDSINIFFHN 91 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGgHNd~-----rpqeY~e~V~~FL~k 91 (399)
++++++|+|++||++|.++|+..++++++.+++ .|+++.++|||+.. ...+.+..|.+||.+
T Consensus 282 l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 282 LKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred HHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 667899999999999999999999999999887 57888899999752 246788999999975
No 25
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.89 E-value=4.1e-05 Score=72.66 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC--ChHHHHHHHHHHHHH
Q 015835 23 DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP--RPQFYFDSINIFFHN 91 (399)
Q Consensus 23 DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~--rpqeY~e~V~~FL~k 91 (399)
..+....+++++||+|||||++|.+||+.+++.|+. ..++++++| ||+.. .++.+.+.|..||++
T Consensus 303 ~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 303 RVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPD----GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred chhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccC----CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 355666788899999999999999999999988753 468888985 69753 567788888888864
No 26
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.88 E-value=0.00011 Score=69.70 Aligned_cols=65 Identities=9% Similarity=0.063 Sum_probs=52.0
Q ss_pred HHHhccC-CCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCChHHHHHHHHHHHHHhc
Q 015835 27 IKVAKSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 27 I~~VkkI-~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~L 93 (399)
+..+.++ ++|+|+|||..|.+||++.++++++..++ ++++.++| ||.-.. +.-.+.|..|+..+|
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~-~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFD-PNNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCC-hHHHHHHHHHHHHhC
Confidence 4566677 69999999999999999999999998764 67888886 687643 345688888887654
No 27
>PLN02578 hydrolase
Probab=97.85 E-value=6.6e-05 Score=73.17 Aligned_cols=67 Identities=12% Similarity=0.244 Sum_probs=55.9
Q ss_pred CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCC--CCChHHHHHHHHHHHH
Q 015835 23 DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHN--SPRPQFYFDSINIFFH 90 (399)
Q Consensus 23 DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHN--d~rpqeY~e~V~~FL~ 90 (399)
+++..+.++++++|+|+|||++|.+||...+++|.+.++.. +++.+++||. ...++++.+.|.+||.
T Consensus 285 ~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a-~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 285 RYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT-TLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 34455678889999999999999999999999999888654 6666788895 4578889999999985
No 28
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.82 E-value=5.9e-05 Score=75.46 Aligned_cols=66 Identities=24% Similarity=0.418 Sum_probs=55.9
Q ss_pred HHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCC-CCCC--Ch----HHHHHHHHHHHHHh
Q 015835 27 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNSP--RP----QFYFDSINIFFHNV 92 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGg-HNd~--rp----qeY~e~V~~FL~k~ 92 (399)
.+.+.++.+|+|++||++|.+.-+.-++.||+.|.. +|.|.++||. |--. .+ ..++..|.+||.+.
T Consensus 239 e~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 239 EKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 456668999999999999999999999999999998 7999999998 7422 12 35889999999865
No 29
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.80 E-value=4.5e-05 Score=70.89 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=50.4
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHHhc
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k~L 93 (399)
..+.+++||+|+|||++|.+|++....++...+....++.++++ ||.- .++.++.+.|..||.+..
T Consensus 222 ~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 222 QWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred HHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 34577899999999999999966555555555555677888865 6853 477889999999998654
No 30
>PRK06489 hypothetical protein; Provisional
Probab=97.79 E-value=7.8e-05 Score=72.65 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=55.8
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHH--HHHHHHhCCCceEEEecC-----CCCC-CChHHHHHHHHHHHHHhc
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHS--DRIFEAYAGDKNIIKFEG-----DHNS-PRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehS--erLYEAakgpKqL~ifeG-----gHNd-~rpqeY~e~V~~FL~k~L 93 (399)
++....++++++|+|+|+|++|.++|++.+ +++.+..++ .++++++| ||.- .+|+.|.+.|..||..+.
T Consensus 282 ~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 282 YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 445677889999999999999999999987 778777654 47888887 7853 367789999999998654
No 31
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.77 E-value=7.8e-05 Score=72.72 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=48.4
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecCC-CCC---CChHHHHHHHHHHHH
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEGD-HNS---PRPQFYFDSINIFFH 90 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeGg-HNd---~rpqeY~e~V~~FL~ 90 (399)
.+|+|+|||++|.+|+++.++++|+.+.. .+++.+++|+ |.- ...+++++.|.+||.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 69999999999999999999999998775 6899999985 743 234678899999985
No 32
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.76 E-value=7.5e-05 Score=66.75 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=50.9
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHH
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~ 90 (399)
..++++.+|+|||+|++|.+||++.++.+.+..+ ..+++.++| ||.- ..+.++.+.|..||+
T Consensus 214 ~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 214 RDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP-TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc-CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 4567789999999999999999999999987654 357888887 6863 367789999999974
No 33
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.75 E-value=8e-05 Score=73.01 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=50.3
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHH-----HHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHS-----DRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehS-----erLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
+....++++++|+|||||++|.++|+... ++|.+..+ ..++++++| ||.- .++.++.+.|..||.+
T Consensus 283 ~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 283 NPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 34567788999999999999999999843 23333332 467888987 6853 4678899999999975
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.74 E-value=6.8e-05 Score=72.44 Aligned_cols=64 Identities=8% Similarity=0.052 Sum_probs=54.3
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC--CCCC--CChHHHHHHHHHHHHHhc
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHNS--PRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG--gHNd--~rpqeY~e~V~~FL~k~L 93 (399)
++++++|+|+|+|++|.++|+.+++++++......+++++++ ||.- ..|+.+.+.|..||.+..
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 567899999999999999999999999998866678888863 7854 478889999999997653
No 35
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.72 E-value=7e-05 Score=72.23 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=63.8
Q ss_pred CCCCC--CCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHHhcCC
Q 015835 18 KFDIT--DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVLQP 95 (399)
Q Consensus 18 GFdI~--DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k~Lq~ 95 (399)
||.+. .+.-......+.+|.|.|-|+.|++||...+++||+.|+.+ .++.=+|||.-.....|.+.|.+||...++.
T Consensus 145 Gf~~~~~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~HpggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 145 GFKFPSKKLDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred cCCCCcchhhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCCccCCCchHHHHHHHHHHHHHHHh
Confidence 56655 23333344468999999999999999999999999999988 4444489999888889999999999988765
Q ss_pred CC
Q 015835 96 PE 97 (399)
Q Consensus 96 p~ 97 (399)
.-
T Consensus 224 ~~ 225 (230)
T KOG2551|consen 224 ES 225 (230)
T ss_pred hh
Confidence 44
No 36
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.69 E-value=7.9e-05 Score=69.83 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=51.2
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCc--eEEEecC-CCCC--CChHHHHHHHHHHHHHh
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK--NIIKFEG-DHNS--PRPQFYFDSINIFFHNV 92 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpK--qL~ifeG-gHNd--~rpqeY~e~V~~FL~k~ 92 (399)
..++++.+|+|+|||++|.++|+.. +.|.+.+++.+ .++.++| ||.- ..++.+.+.|..||.+.
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 3467899999999999999999876 88888877543 4778887 6954 46778889999999753
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=97.63 E-value=0.00018 Score=69.85 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=52.9
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEE----EecC-CCCC--CChHHHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNII----KFEG-DHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~----ifeG-gHNd--~rpqeY~e~V~~FL~ 90 (399)
-.+.++++++|+|+|+|++|.++|+..+++|.+..++.+..+ ++++ ||.- ..+..+.+.|..||+
T Consensus 280 ~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 280 LTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 467888999999999999999999999999999988754332 4455 7853 467888899999974
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.61 E-value=0.00021 Score=71.79 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=58.5
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHHhcCCCCC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNVLQPPED 98 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k~Lq~p~d 98 (399)
+-...+.++++|+|||+|.+|.++| ..++++++..+.+.++++++| ||+. .++..+.+.|..|++.+++...+
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~~ 391 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDRE 391 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCch
Confidence 3345678899999999999998765 778888877766678999987 6854 46788999999999999887654
No 39
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.60 E-value=0.00021 Score=70.76 Aligned_cols=70 Identities=17% Similarity=0.295 Sum_probs=60.0
Q ss_pred CCChHHHhccCC-CCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCC--CCChHHHHHHHHHHHHHhc
Q 015835 23 DLNTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHN--SPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 23 DVsPI~~VkkI~-vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHN--d~rpqeY~e~V~~FL~k~L 93 (399)
+-+....++++. ||+|||+|.+|.+||.+.++.|-+.. ...+++.++| ||. ..+|+.+...|..|+.+..
T Consensus 252 ~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 252 DENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 466777888887 99999999999999999999998877 5679999985 684 4688999999999998753
No 40
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.60 E-value=0.00023 Score=62.60 Aligned_cols=65 Identities=22% Similarity=0.393 Sum_probs=50.3
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHH
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~ 90 (399)
.+....++++++|+|||+|++|. +++..++.+.+..+. .+++.+++ ||.. .++.++.+.|..||+
T Consensus 221 ~~~~~~l~~i~~P~lii~G~~D~-~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 221 WDITDKLSEIKVPTLLTVGEFDT-MTPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cCHHHHhhccCCCEEEEecCCCc-cCHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 34556778899999999999998 567888888876654 46777775 6864 467889899999874
No 41
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.56 E-value=0.00025 Score=63.93 Aligned_cols=69 Identities=25% Similarity=0.357 Sum_probs=47.8
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHh---CCCceEEEecCC-CCC---CCh-------HHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAY---AGDKNIIKFEGD-HNS---PRP-------QFYFDSINIFFH 90 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAa---kgpKqL~ifeGg-HNd---~rp-------qeY~e~V~~FL~ 90 (399)
.++..+.++.+|+|+++|..|.++|.+..+++.++. +.+-++.+|+|. |-- .++ ...|+++.+||+
T Consensus 136 ~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 136 PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999999988888877 336789999985 622 111 347888999998
Q ss_pred Hhc
Q 015835 91 NVL 93 (399)
Q Consensus 91 k~L 93 (399)
++|
T Consensus 216 ~~L 218 (218)
T PF01738_consen 216 RHL 218 (218)
T ss_dssp C--
T ss_pred hcC
Confidence 765
No 42
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.55 E-value=0.0002 Score=64.89 Aligned_cols=67 Identities=9% Similarity=0.102 Sum_probs=53.2
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
.+....++++.+|+|+|||++|.++|.++++.+.+..+ ..++.++++ ||.- ..|+.+.+.|..|-++
T Consensus 186 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 186 VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 34456788899999999999999999999988877765 447777876 6953 4677888888888653
No 43
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.54 E-value=0.00022 Score=74.58 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=50.9
Q ss_pred cCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC---CChHHHHHHHHHHHHH
Q 015835 32 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS---PRPQFYFDSINIFFHN 91 (399)
Q Consensus 32 kI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd---~rpqeY~e~V~~FL~k 91 (399)
++++|+|+|||.+|.++|+++++.|.+..+. .++.+++| ||.. .++..+.+.|.+|...
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 6899999999999999999999999888865 67888887 6973 4678899999999864
No 44
>PLN02965 Probable pheophorbidase
Probab=97.53 E-value=0.00027 Score=64.72 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=51.7
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCC--CCChHHHHHHHHHHHHHh
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHN--SPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHN--d~rpqeY~e~V~~FL~k~ 92 (399)
+.++++|+|+|+|++|.+||+..++.|.+..++. ++++++| ||. ..+|+++.+.|.+|++..
T Consensus 189 ~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 189 PEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 4468999999999999999999999999887764 5777765 794 458888999999998754
No 45
>PRK11460 putative hydrolase; Provisional
Probab=97.52 E-value=0.00027 Score=65.74 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=49.3
Q ss_pred cCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC-CCCCCChHHHHHHHHHHHHHhcCC
Q 015835 32 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQP 95 (399)
Q Consensus 32 kI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~Lq~ 95 (399)
...+|+|++||++|.+||+++++++++.++. ..+++.++| +|.-. .+.++.+..||.+.+..
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRLRYTVPK 211 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHHHHHcch
Confidence 3579999999999999999999999987764 356777787 57543 45678888888887744
No 46
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.50 E-value=0.00026 Score=64.32 Aligned_cols=58 Identities=16% Similarity=0.273 Sum_probs=45.0
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC-CCCCCChHHHHHHHHHHHHHhc
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~L 93 (399)
++|+|++||+.|.+||++.++++++.++. .-++..|+| ||.-. .+.++.+.+||++.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--PEELRDLREFLEKHI 216 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----HHHHHHHHHHHHHH-
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC--HHHHHHHHHHHhhhC
Confidence 78999999999999999999999988776 357888895 68653 567788999998763
No 47
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.49 E-value=0.00022 Score=70.61 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=54.2
Q ss_pred CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHHh
Q 015835 21 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 21 I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k~ 92 (399)
+.=++....+++|+||+||.-|-.|.++||.-...+|++++++|++++++..||...+....++...||.++
T Consensus 249 L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 249 LSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred HhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 445788899999999999999999999999999999999999999999997665555555588888999863
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.49 E-value=0.00028 Score=68.75 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=56.8
Q ss_pred HHhccCCCCEEEEEeCCCCeeC-hHHHHHHHHHhCCC-ceEEEecCC-C---CCCCh--HHHHHHHHHHHHHhcC
Q 015835 28 KVAKSCFVPVLFGHAVEDDFIN-PHHSDRIFEAYAGD-KNIIKFEGD-H---NSPRP--QFYFDSINIFFHNVLQ 94 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVP-pehSerLYEAakgp-KqL~ifeGg-H---Nd~rp--qeY~e~V~~FL~k~Lq 94 (399)
.....+.+|+|++||++|.+|+ .+...++|+.++.+ +.+..++|+ | |.... .++++.+..||.+...
T Consensus 222 ~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 222 RDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred hccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 4456689999999999999999 79999999999997 699999997 6 44444 7799999999987654
No 49
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.49 E-value=0.00031 Score=69.48 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=55.5
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCc---eEEEec--CCCCC--CChHHHHHHHHHHHHHh
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK---NIIKFE--GDHNS--PRPQFYFDSINIFFHNV 92 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpK---qL~ife--GgHNd--~rpqeY~e~V~~FL~k~ 92 (399)
-...++++++|+|+|+|.+|.++|++.++.|.+..++.+ +++.++ .||.- ..+.++.+.|..||.+.
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 356788999999999999999999999999999887742 566663 47854 47778899999999874
No 50
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.46 E-value=0.00035 Score=62.45 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=49.9
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
++++.+|+|||+|.+|.+|+.+..+.+.+..+. .++++++| ||.- ..++.+.+.|..||.+
T Consensus 191 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 191 IPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred cCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 456789999999999999999999999877654 56777876 6864 3577899999999974
No 51
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.42 E-value=0.00073 Score=68.48 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=56.5
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC--CCCC--CChHHHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG--DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG--gHNd--~rpqeY~e~V~~FL~k 91 (399)
+....++++++|+|+|+|+.|.++|+++++.+.+..+. ..+++++++ ||.. ..+..+.+.|..||.+
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 56778889999999999999999999999999998864 467888875 5754 4677888999999864
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=97.39 E-value=0.00023 Score=71.40 Aligned_cols=62 Identities=19% Similarity=0.206 Sum_probs=51.4
Q ss_pred ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCC--ChHHHHHHHHHHHHHhc
Q 015835 31 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP--RPQFYFDSINIFFHNVL 93 (399)
Q Consensus 31 kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~--rpqeY~e~V~~FL~k~L 93 (399)
.++++|+|+|||.+|.+||+.+.+++++..+ ...++.++|||+.. .+..+.+.|..||...-
T Consensus 230 ~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 230 RYTDVPVQLIVPTGDPYVRPALYDDLSRWVP-RLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CCccCceEEEEeCCCcccCHHHhccccccCC-cceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 3478999999999999999999999986654 46777788899653 66789999999998744
No 53
>PLN02442 S-formylglutathione hydrolase
Probab=97.38 E-value=0.00024 Score=67.88 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=48.5
Q ss_pred CCCChHHHhccCCCCEEEEEeCCCCeeChH-HHHHHHHHhCC---CceEEEecC-CCCCCChHHHHHHHHHHHHHh
Q 015835 22 TDLNTIKVAKSCFVPVLFGHAVEDDFINPH-HSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 22 ~DVsPI~~VkkI~vPILFIHGt~D~fVPpe-hSerLYEAakg---pKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~ 92 (399)
+..+++..+....+|+|++||++|.+||.. +++.++++++. +.++.+++| +|+-..-..+++....|..+.
T Consensus 205 d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 205 DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFFIATFIDDHINHHAQA 280 (283)
T ss_pred ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHHHHH
Confidence 445566666667999999999999999984 57777766543 568888898 587543333444444444443
No 54
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.30 E-value=0.00031 Score=68.17 Aligned_cols=64 Identities=16% Similarity=0.318 Sum_probs=53.8
Q ss_pred HHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEecC-CCC---CCChHHHHHHHHHHHH
Q 015835 27 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKFEG-DHN---SPRPQFYFDSINIFFH 90 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~ifeG-gHN---d~rpqeY~e~V~~FL~ 90 (399)
+..+..|+.|+|++.|.+|..||.+.+..||+.... +|+|..++| ||. +.......+.|..||+
T Consensus 174 ~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 174 RRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 456667899999999999999999999999998876 799999998 573 3334568899999996
No 55
>PLN02511 hydrolase
Probab=97.22 E-value=0.00041 Score=69.34 Aligned_cols=72 Identities=17% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCChHHHhccCCCCEEEEEeCCCCeeChHHHH-HHHHHhCCCceEEEec-CCCCCC--ChHH------HHHHHHHHHHHh
Q 015835 23 DLNTIKVAKSCFVPVLFGHAVEDDFINPHHSD-RIFEAYAGDKNIIKFE-GDHNSP--RPQF------YFDSINIFFHNV 92 (399)
Q Consensus 23 DVsPI~~VkkI~vPILFIHGt~D~fVPpehSe-rLYEAakgpKqL~ife-GgHNd~--rpqe------Y~e~V~~FL~k~ 92 (399)
+.++...++++++|+|+|||.+|.+||++... .+.+. ....++++++ |||... ++.. +.+.|.+||...
T Consensus 287 ~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~-~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 287 NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA-NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc-CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 45677889999999999999999999988653 33322 2345777776 479643 2322 468899999877
Q ss_pred cCC
Q 015835 93 LQP 95 (399)
Q Consensus 93 Lq~ 95 (399)
...
T Consensus 366 ~~~ 368 (388)
T PLN02511 366 EEG 368 (388)
T ss_pred HHh
Confidence 643
No 56
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.21 E-value=0.0011 Score=59.07 Aligned_cols=60 Identities=10% Similarity=0.141 Sum_probs=45.5
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
+....+++++||+|+|||.+|.++. . +.+.. ..+++.++| ||.- .+++++.+.|..||.+
T Consensus 179 ~~~~~l~~i~~P~lii~G~~D~~~~-~----~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 179 DLRPALQALTFPFYYLCGERDSKFQ-A----LAQQL--ALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred cHHHHhhccCCCeEEEEeCCcchHH-H----HHHHh--cCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 3446778899999999999998663 2 22222 578999987 7964 4778899999999975
No 57
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.16 E-value=0.0004 Score=63.83 Aligned_cols=55 Identities=24% Similarity=0.424 Sum_probs=39.6
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHH
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDS 84 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~ 84 (399)
-.++.+|+|.|+|++|.+||++.+++|++.|.....++..+|||.-.+...+.++
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~~~~~~ 211 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRKKEDVDK 211 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----HHHHHH
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCChhhccC
Confidence 4457999999999999999999999999999876778888999998887776664
No 58
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.15 E-value=0.00079 Score=56.34 Aligned_cols=50 Identities=18% Similarity=0.351 Sum_probs=42.4
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS 75 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd 75 (399)
+....++++++|+|+|||++|.++|.+..++|.+..+ .++++.++| +|.-
T Consensus 167 ~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 167 DLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFL 217 (228)
T ss_dssp HHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTH
T ss_pred cccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCcc
Confidence 3446778889999999999999999999999998775 578999986 5863
No 59
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.12 E-value=0.001 Score=57.37 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=42.7
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP 76 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~ 76 (399)
+....+.++.+|+|+|+|++|.++|++.+.+|.+..+. .++++++| ||+..
T Consensus 166 ~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 166 DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHH
T ss_pred cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHH
Confidence 44566777999999999999999999999997766655 77888988 79763
No 60
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.10 E-value=0.0017 Score=65.81 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=49.0
Q ss_pred ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHHH
Q 015835 31 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFH 90 (399)
Q Consensus 31 kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~ 90 (399)
+++++|+|||+|+.|.++|++.++++++.. ..++.++++ +|.- .+++++.+.|..||.
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 357999999999999999999999988863 568888987 6853 477889999999986
No 61
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.09 E-value=0.0015 Score=55.51 Aligned_cols=63 Identities=13% Similarity=0.229 Sum_probs=47.1
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHH
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFF 89 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL 89 (399)
+....++++.+|+|||+|.+|.+++ ...+++.+.. ...+++.++| ||.- ..++.+.+.|.+||
T Consensus 185 ~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 185 SLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred chHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 3445677899999999999999874 5666665444 4678888887 6853 35677888888887
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.07 E-value=0.0011 Score=73.74 Aligned_cols=68 Identities=15% Similarity=0.036 Sum_probs=54.6
Q ss_pred HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEE-ecCCCCCC-----ChHHHHHHHHHHHHHhcCCC
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIK-FEGDHNSP-----RPQFYFDSINIFFHNVLQPP 96 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~i-feGgHNd~-----rpqeY~e~V~~FL~k~Lq~p 96 (399)
.++++++|+|+|||++|.+||+++++.|.+..++.+...+ .++||+.. .+.+.|..|.+||.++-+..
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~ 365 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDG 365 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCC
Confidence 4678999999999999999999999999998876543244 45689753 34679999999999876543
No 63
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.02 E-value=0.0024 Score=60.42 Aligned_cols=61 Identities=16% Similarity=0.379 Sum_probs=49.8
Q ss_pred ccC-CCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCC--CChHHHHHHHHHHHHHh
Q 015835 31 KSC-FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS--PRPQFYFDSINIFFHNV 92 (399)
Q Consensus 31 kkI-~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd--~rpqeY~e~V~~FL~k~ 92 (399)
.++ ++|+|+|+|++|.+||++..++|.+..++. +++.+++||.- ..|++..+.|..+...+
T Consensus 207 ~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 207 GDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred cccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 344 799999999999999999999999887755 67777989953 57788888887776543
No 64
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=96.97 E-value=0.0012 Score=64.11 Aligned_cols=75 Identities=23% Similarity=0.125 Sum_probs=56.6
Q ss_pred HhCCCCCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCC-C-hHHHHHHHHHHHHH
Q 015835 16 KAKFDITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP-R-PQFYFDSINIFFHN 91 (399)
Q Consensus 16 rAGFdI~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~-r-pqeY~e~V~~FL~k 91 (399)
-..|.=.++ ....+.+++||+||+||..|.+|+-.|.-=|-...+..|-.+.-+|+||-. | +.++-..|.+||++
T Consensus 199 f~~~~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 199 FHSFCDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred HhhcCCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 334444455 556788999999999999999999999988877766655444447889853 4 45677789999975
No 65
>PRK03204 haloalkane dehalogenase; Provisional
Probab=96.96 E-value=0.0019 Score=61.01 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=43.7
Q ss_pred CCCEEEEEeCCCCeeChH-HHHHHHHHhCCCceEEEecC-CCCC--CChHHHHHHHHHHH
Q 015835 34 FVPVLFGHAVEDDFINPH-HSDRIFEAYAGDKNIIKFEG-DHNS--PRPQFYFDSINIFF 89 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpe-hSerLYEAakgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL 89 (399)
.+|+|+|+|.+|.++|+. +++++.+..++ .+++++++ ||.- ..|+++.+.|.+||
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 899999999999999765 56777766654 68888876 6864 46777888888887
No 66
>PRK10115 protease 2; Provisional
Probab=96.96 E-value=0.0014 Score=70.97 Aligned_cols=74 Identities=11% Similarity=0.140 Sum_probs=54.7
Q ss_pred CCCChHHHhccCCCC-EEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEe---c-CCCCCCCh--HHHH--HHHHHHH
Q 015835 22 TDLNTIKVAKSCFVP-VLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKF---E-GDHNSPRP--QFYF--DSINIFF 89 (399)
Q Consensus 22 ~DVsPI~~VkkI~vP-ILFIHGt~D~fVPpehSerLYEAakg---pKqL~if---e-GgHNd~rp--qeY~--e~V~~FL 89 (399)
..++|+..|++++.| +|++||.+|.-||+.|+.+++.+.+. +..++++ + +||....+ ..+. ..+..||
T Consensus 593 ~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl 672 (686)
T PRK10115 593 KSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFL 672 (686)
T ss_pred HHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 468999999999999 56779999999999999999988865 4455555 4 47875432 2222 2357788
Q ss_pred HHhcCC
Q 015835 90 HNVLQP 95 (399)
Q Consensus 90 ~k~Lq~ 95 (399)
...++.
T Consensus 673 ~~~~~~ 678 (686)
T PRK10115 673 IALAQG 678 (686)
T ss_pred HHHhCC
Confidence 777653
No 67
>COG0400 Predicted esterase [General function prediction only]
Probab=96.94 E-value=0.002 Score=60.85 Aligned_cols=59 Identities=22% Similarity=0.359 Sum_probs=47.6
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCCCCCCChHHHHHHHHHHHHHhc
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGgHNd~rpqeY~e~V~~FL~k~L 93 (399)
..+|+|++||+.|.+||..++.+|.+.+.. ......+++||.-. .+-++.+..||.+.+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~--~e~~~~~~~wl~~~~ 206 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP--PEELEAARSWLANTL 206 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC--HHHHHHHHHHHHhcc
Confidence 479999999999999999999999976654 45677778888654 456778888988764
No 68
>PLN02872 triacylglycerol lipase
Probab=96.94 E-value=0.0042 Score=63.34 Aligned_cols=66 Identities=11% Similarity=0.220 Sum_probs=53.9
Q ss_pred HhccC--CCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCC-----CChHHHHHHHHHHHHHhcC
Q 015835 29 VAKSC--FVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNS-----PRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 29 ~VkkI--~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd-----~rpqeY~e~V~~FL~k~Lq 94 (399)
.++++ ++|+++++|.+|.++++...++|++..+...++..+++ +|.+ ..++..++.|.+||+++.+
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 45566 68999999999999999999999999887667878887 6852 3456788999999987553
No 69
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.88 E-value=0.0027 Score=64.83 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=66.5
Q ss_pred CCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCChHHHHHHHHHHHHHhcCCCC
Q 015835 22 TDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQPPE 97 (399)
Q Consensus 22 ~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~Lq~p~ 97 (399)
.-++|+.+..+..+|.|+|.|+.|+|-.+..+.--|+..+|+|.|.++|+ +|.... ...++.+..|+...+....
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-~~~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-SDVVQSLRAFYNRIQNGRP 325 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-HHHHHHHHHHHHHHHcCCC
Confidence 34899999999999999999999999999999999999999999999998 587655 7788999999998765433
No 70
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.65 E-value=0.0037 Score=68.77 Aligned_cols=76 Identities=16% Similarity=0.312 Sum_probs=60.1
Q ss_pred CCCChHHHhccCCCCE-EEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC-CCCCCC-h--HHHHHHHHHHHHHhc
Q 015835 22 TDLNTIKVAKSCFVPV-LFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DHNSPR-P--QFYFDSINIFFHNVL 93 (399)
Q Consensus 22 ~DVsPI~~VkkI~vPI-LFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG-gHNd~r-p--qeY~e~V~~FL~k~L 93 (399)
.+.++...+..++-|. |+|||+.|+-|+++|+.+|+++.+. +-+++.+++ +|.-.. . ..++..+..||..++
T Consensus 669 ~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 669 EESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred hhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 3456667777776666 9999999999999999999988775 567888888 486543 3 568899999999777
Q ss_pred CCCC
Q 015835 94 QPPE 97 (399)
Q Consensus 94 q~p~ 97 (399)
..+.
T Consensus 749 ~~~~ 752 (755)
T KOG2100|consen 749 GSPV 752 (755)
T ss_pred Cccc
Confidence 6554
No 71
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.58 E-value=0.01 Score=49.62 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC-C-hHHHHHHHHHHHHHh
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP-R-PQFYFDSINIFFHNV 92 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~-r-pqeY~e~V~~FL~k~ 92 (399)
...|+|||.++.|.+.|++.+++|.+.+++ ..++.++| ||-.. . ..-..+.|.+||..-
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 359999999999999999999999999988 78999988 58654 2 344667788888753
No 72
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.51 E-value=0.011 Score=48.88 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=46.2
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC--ChHHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP--RPQFYFDSINIFF 89 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~--rpqeY~e~V~~FL 89 (399)
.......+.+|+|+|+|..|.++|......+.+..+....++++++ +|+.. .+..+.+.|..|+
T Consensus 213 ~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 213 LRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred cchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHH
Confidence 3455667789999999999988888886666666555567888876 68654 4556666666644
No 73
>PRK10985 putative hydrolase; Provisional
Probab=96.49 E-value=0.0044 Score=59.83 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=50.2
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCC------ChHH-HHHHHHHHHHHhcC
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSP------RPQF-YFDSINIFFHNVLQ 94 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~------rpqe-Y~e~V~~FL~k~Lq 94 (399)
.+....++++++|+|+|+|++|.++|++....+-+.. ...+++++++ ||+.. .+.. +.+.|.+||...+.
T Consensus 245 ~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 245 CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 3455778889999999999999999999888874433 3446667765 79632 1222 44678999987653
No 74
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.40 E-value=0.0097 Score=55.24 Aligned_cols=66 Identities=18% Similarity=0.265 Sum_probs=39.1
Q ss_pred HhccCCCCEEEEEeCCCCeeChH-HHHHHHHHhCC-----CceEEEecC-CCCCC-------C----------------h
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPH-HSDRIFEAYAG-----DKNIIKFEG-DHNSP-------R----------------P 78 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpe-hSerLYEAakg-----pKqL~ifeG-gHNd~-------r----------------p 78 (399)
.|.++++|+|||+|++|.+.|.. +++.+-+..+. .-+++.++| ||.-. + +
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~ 189 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEP 189 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-H
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCCh
Confidence 36678999999999999999987 55444443332 246777777 68421 0 0
Q ss_pred -------HHHHHHHHHHHHHhcC
Q 015835 79 -------QFYFDSINIFFHNVLQ 94 (399)
Q Consensus 79 -------qeY~e~V~~FL~k~Lq 94 (399)
..-|++|..||++.|.
T Consensus 190 ~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 190 EAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 2378999999999875
No 75
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.36 E-value=0.013 Score=57.14 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=51.5
Q ss_pred HHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-Cc---eEEEecC-CCCCC-------Ch------HHHHHHHHHH
Q 015835 27 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DK---NIIKFEG-DHNSP-------RP------QFYFDSINIF 88 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-pK---qL~ifeG-gHNd~-------rp------qeY~e~V~~F 88 (399)
...++++++|+||+.|+.|.++|++--..+=++.+. ++ ++.+|+| +|--. .| ++.++.+..|
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~W 236 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISW 236 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHH
Confidence 677888999999999999999999988877777776 33 6889999 56211 12 3466778888
Q ss_pred HHHhc
Q 015835 89 FHNVL 93 (399)
Q Consensus 89 L~k~L 93 (399)
|+.++
T Consensus 237 f~~y~ 241 (242)
T KOG3043|consen 237 FKHYL 241 (242)
T ss_pred HHHhh
Confidence 88775
No 76
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.33 E-value=0.0044 Score=64.10 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=50.3
Q ss_pred hccCC-CCEEEEEeCCCCeeChHHHHHHHHHhCC----CceEEEe-cCCCCCC-----ChHHHHHHHHHHHHH
Q 015835 30 AKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYAG----DKNIIKF-EGDHNSP-----RPQFYFDSINIFFHN 91 (399)
Q Consensus 30 VkkI~-vPILFIHGt~D~fVPpehSerLYEAakg----pKqL~if-eGgHNd~-----rpqeY~e~V~~FL~k 91 (399)
+++|+ +|+|.|-|+.|.|+|+.+++.+.+.|.+ .|..+.+ +|||... ...+.|..|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 45688 9999999999999999999999999833 4656666 6689643 345688999999975
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.29 E-value=0.0096 Score=56.33 Aligned_cols=69 Identities=12% Similarity=0.138 Sum_probs=49.8
Q ss_pred CChHHHhcc--CCCCEEEEEeCCCCeeCh-HHHHHHHHHhCC---CceEEEecC-CCCCCChHHHHHHHHHHHHHh
Q 015835 24 LNTIKVAKS--CFVPVLFGHAVEDDFINP-HHSDRIFEAYAG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 24 VsPI~~Vkk--I~vPILFIHGt~D~fVPp-ehSerLYEAakg---pKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~ 92 (399)
.+++..+.+ ...|+|++||+.|.+||. .+++.++++++. +-+++.++| +|-...-..++.....|+.+.
T Consensus 199 ~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 199 YDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAER 274 (275)
T ss_pred cchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHhh
Confidence 445555543 468999999999999999 677777766654 457888899 686655556667777777654
No 78
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.24 E-value=0.0096 Score=70.47 Aligned_cols=67 Identities=13% Similarity=0.255 Sum_probs=53.8
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCC-----------ceEEEecC-CCCC--CChHHHHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD-----------KNIIKFEG-DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgp-----------KqL~ifeG-gHNd--~rpqeY~e~V~~FL~k 91 (399)
-...++++++|+|+|||++|.++| .++++|++..+.. .+++.++| ||.- .+|..+.+.|..||.+
T Consensus 1560 l~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1560 LWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 346788899999999999999886 7888888766542 37888987 6854 4788899999999997
Q ss_pred hc
Q 015835 92 VL 93 (399)
Q Consensus 92 ~L 93 (399)
..
T Consensus 1639 ~~ 1640 (1655)
T PLN02980 1639 LH 1640 (1655)
T ss_pred cc
Confidence 54
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.23 E-value=0.0061 Score=65.49 Aligned_cols=47 Identities=11% Similarity=-0.017 Sum_probs=43.8
Q ss_pred HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCC
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNS 75 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd 75 (399)
.+++|+||+|+|-|+.|.|||++.+.++.+..++++++++.+|||..
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHIg 482 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHIQ 482 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCccc
Confidence 46789999999999999999999999999999999999999999964
No 80
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.04 E-value=0.031 Score=54.77 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=67.8
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChH-
Q 015835 1 MVKFAIQYMRKAIQKKAKFDITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQ- 79 (399)
Q Consensus 1 lVk~aL~lIr~~IKkrAGFdI~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpq- 79 (399)
++.++|+++|.=.+...+|.+..- ..+.||+..+-|++|..|..++...--+..++.-.+..|+|||.....+
T Consensus 149 l~~l~LPilRAD~~~~e~Y~~~~~------~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~ 222 (244)
T COG3208 149 LMALFLPILRADFRALESYRYPPP------APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQR 222 (244)
T ss_pred HHHHHHHHHHHHHHHhcccccCCC------CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhH
Confidence 467889999998888888887665 3578999999999999999999999999999999999999999876432
Q ss_pred -HHHHHHHHHH
Q 015835 80 -FYFDSINIFF 89 (399)
Q Consensus 80 -eY~e~V~~FL 89 (399)
+....|.+++
T Consensus 223 ~~v~~~i~~~l 233 (244)
T COG3208 223 EEVLARLEQHL 233 (244)
T ss_pred HHHHHHHHHHh
Confidence 3444444444
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.80 E-value=0.013 Score=62.42 Aligned_cols=48 Identities=21% Similarity=0.073 Sum_probs=40.8
Q ss_pred HHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCC
Q 015835 27 IKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHN 74 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHN 74 (399)
...++++++|+|+|+|++|.++|+..++.+.+.+++.+.+++-.+||+
T Consensus 408 ~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi 455 (532)
T TIGR01838 408 RLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHI 455 (532)
T ss_pred ecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCc
Confidence 357778999999999999999999999999999887666655566896
No 82
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=95.80 E-value=0.0083 Score=61.14 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEe-cCCCCC-----C-ChH-HHHHHHHHHHHHh
Q 015835 21 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF-EGDHNS-----P-RPQ-FYFDSINIFFHNV 92 (399)
Q Consensus 21 I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~if-eGgHNd-----~-rpq-eY~e~V~~FL~k~ 92 (399)
++..+++..+.+|.+|+|+||+.+|.|++++.--++-+..+..-.|.+. -|||.. . +++ ...++|.+||...
T Consensus 261 Yr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 261 YRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred HHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 3457888999999999999999999999998766665443333344444 488943 1 223 2447789999876
Q ss_pred cC
Q 015835 93 LQ 94 (399)
Q Consensus 93 Lq 94 (399)
+.
T Consensus 341 ~~ 342 (345)
T COG0429 341 LE 342 (345)
T ss_pred Hh
Confidence 53
No 83
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=95.78 E-value=0.024 Score=52.54 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=44.2
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFH 90 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~ 90 (399)
...++|++||+.|+++++..+..-| .+.++++...|+|--..-.++...|..||+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~---~~~~~~i~~ggdH~f~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKY---RGCAQIIEEGGDHSFQDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHh---cCceEEEEeCCCCCCccHHHHHHHHHHhhC
Confidence 3579999999999999997776555 455777766677877777889999999973
No 84
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.59 E-value=0.024 Score=57.24 Aligned_cols=61 Identities=20% Similarity=0.408 Sum_probs=51.4
Q ss_pred ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEec-CCCC--CCChHHHHHHHHHHHHHh
Q 015835 31 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFE-GDHN--SPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 31 kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ife-GgHN--d~rpqeY~e~V~~FL~k~ 92 (399)
.-...|+|||||.++.|||-+|-.+|-..++. .++..++ +||. ...|+++++.|..||.+.
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 34679999999999999999999988776655 6788887 7894 567899999999998764
No 85
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=95.55 E-value=0.022 Score=55.86 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=40.6
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CCCCChH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQ 79 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HNd~rpq 79 (399)
..||+|=+||..|.+||.+.+..+.+..++ +.|.+++|+ ||..-.+
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYTGHQ 244 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCccchh
Confidence 379999999999999999999999999888 999999995 9865433
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=95.45 E-value=0.032 Score=58.13 Aligned_cols=82 Identities=16% Similarity=0.260 Sum_probs=57.3
Q ss_pred HHHHHHHhCCC-----CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEe---cCCCCC---C--
Q 015835 10 RKAIQKKAKFD-----ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF---EGDHNS---P-- 76 (399)
Q Consensus 10 r~~IKkrAGFd-----I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~if---eGgHNd---~-- 76 (399)
..+...-+||. +++.+++++|++|++|+|+|++.+|.|+|.+ +.-. +.++..+.+.++ .|||.. .
T Consensus 293 ~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~-~ip~-~~~~~np~v~l~~T~~GGHlgfleg~~ 370 (409)
T KOG1838|consen 293 EALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEE-AIPI-DDIKSNPNVLLVITSHGGHLGFLEGLW 370 (409)
T ss_pred hhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcc-cCCH-HHHhcCCcEEEEEeCCCceeeeeccCC
Confidence 44455556665 4668999999999999999999999999997 3333 344444444333 588943 2
Q ss_pred -ChHHHHHH-HHHHHHHhc
Q 015835 77 -RPQFYFDS-INIFFHNVL 93 (399)
Q Consensus 77 -rpqeY~e~-V~~FL~k~L 93 (399)
....|+++ +.+||....
T Consensus 371 p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 371 PSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CccchhHHHHHHHHHHHHH
Confidence 23457777 889987754
No 87
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=95.24 E-value=0.035 Score=58.30 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=54.9
Q ss_pred HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCC-------ChHHHHH----HHHHHHHHhcCCC
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP-------RPQFYFD----SINIFFHNVLQPP 96 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~-------rpqeY~e----~V~~FL~k~Lq~p 96 (399)
.+++++||++++.|+.|.++|++-......+.++.+.++++.+||... ....||. .+..||...-..+
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~ 403 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHP 403 (445)
T ss_pred chhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCC
Confidence 467899999999999999999999999999999989999999999431 2234776 7777887655443
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.17 E-value=0.061 Score=51.06 Aligned_cols=65 Identities=28% Similarity=0.407 Sum_probs=52.4
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCC---ceEEEecCC-CCCC--C----h-------HHHHHHHHHHHHHh
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD---KNIIKFEGD-HNSP--R----P-------QFYFDSINIFFHNV 92 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAakgp---KqL~ifeGg-HNd~--r----p-------qeY~e~V~~FL~k~ 92 (399)
..++++|+|+++|..|.+||...-.+|-++.... .++.+++|+ |--. + . +.-|+++..||.+.
T Consensus 154 ~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 154 APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999998877664 578888997 7211 1 1 34889999999988
Q ss_pred cC
Q 015835 93 LQ 94 (399)
Q Consensus 93 Lq 94 (399)
+.
T Consensus 234 ~~ 235 (236)
T COG0412 234 LG 235 (236)
T ss_pred cc
Confidence 75
No 89
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=95.05 E-value=0.058 Score=52.64 Aligned_cols=63 Identities=17% Similarity=0.321 Sum_probs=45.7
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHh-CC---CceEEEecC-CCCCCChHHHHHHHHHHHHHhcCCCC
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAY-AG---DKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQPPE 97 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAa-kg---pKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~Lq~p~ 97 (399)
.+|+++.||..|.+||+...++|++.+ .. .-+++.+++ +|..... .-......||..+|.-.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~-~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAF-ASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhh-cCcHHHHHHHHHHHCCCC
Confidence 699999999999999999999999643 32 345666676 5865321 223566689998886544
No 90
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.38 E-value=0.061 Score=49.74 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=45.4
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecC-CC---CCCChHHHHHHHHHHH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEG-DH---NSPRPQFYFDSINIFF 89 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeG-gH---Nd~rpqeY~e~V~~FL 89 (399)
..+|-|||.++.|.+||++.-+++.+..+. +.....|++ .| ....+++|++.|.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 469999999999999999999999876654 345555666 36 4457899999999985
No 91
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.72 E-value=0.14 Score=51.66 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=54.6
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCChHHHHHHHHHHHHHhcC
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rpqeY~e~V~~FL~k~Lq 94 (399)
++....+.++++|+||.-|.-|+++||.---.+|+++.+.|.+-+++- +|-... ..--+.+..|++..+.
T Consensus 249 fD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p-~~~~~~~~~~l~~l~~ 319 (321)
T COG3458 249 FDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGP-GFQSRQQVHFLKILFG 319 (321)
T ss_pred hhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCc-chhHHHHHHHHHhhcc
Confidence 455566778999999999999999999999999999999999999874 575432 1122346678876654
No 92
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=93.63 E-value=0.03 Score=56.22 Aligned_cols=65 Identities=18% Similarity=0.376 Sum_probs=12.9
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHH-HHHHHHHhCC--CceEE-----EecCC-CCCCCh------HHHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHH-SDRIFEAYAG--DKNII-----KFEGD-HNSPRP------QFYFDSINIFFH 90 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpeh-SerLYEAakg--pKqL~-----ifeGg-HNd~rp------qeY~e~V~~FL~ 90 (399)
-.+..+++.+|+||+.+.+|++||..- -++|-+.++. +..+| +++|+ |+-..+ +...++|..||+
T Consensus 224 l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 224 LKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp HHHTGGG--S-EEEEEE--TT-----------------------------------------------------------
T ss_pred HHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 335667788899999999999999873 3455544443 23444 78996 875422 236788888874
No 93
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=93.44 E-value=0.13 Score=48.64 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=43.0
Q ss_pred HHhccCCCCEEEEEeCCCCeeChHH-----HHHHHHHhC-CCceEEEecC-CCCCC---ChHHHHHHHHHHHH
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPHH-----SDRIFEAYA-GDKNIIKFEG-DHNSP---RPQFYFDSINIFFH 90 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpeh-----SerLYEAak-gpKqL~ifeG-gHNd~---rpqeY~e~V~~FL~ 90 (399)
+.+.++.+|+|+++|..|.+++.-. +.+..+... ..+++..+++ +|+-. .++++.+.|.+||+
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 4455779999999999999864322 133333333 4577888875 69653 23568999999995
No 94
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=93.06 E-value=0.08 Score=47.96 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=24.9
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG 62 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg 62 (399)
..|++|+||++|.+||++.+++++++++.
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 44578999999999999999999987654
No 95
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=92.61 E-value=0.32 Score=49.52 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=46.0
Q ss_pred hccCCCCEEEEEeCCCCeeChHHHHHHHHHhC-CCceEEEecC-CCC--CCChHHHHHHHHHHHHHh
Q 015835 30 AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYA-GDKNIIKFEG-DHN--SPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 30 VkkI~vPILFIHGt~D~fVPpehSerLYEAak-gpKqL~ifeG-gHN--d~rpqeY~e~V~~FL~k~ 92 (399)
..++++|++||.|..|.+-++.--..+|...- .--+.++++| ||. ..+|++.-+.|..||++.
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 44689999999999999999883334443322 2335666676 584 458899999999999875
No 96
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=92.43 E-value=0.26 Score=46.54 Aligned_cols=53 Identities=19% Similarity=0.107 Sum_probs=43.0
Q ss_pred CCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCc----eEEEecCCCC
Q 015835 21 ITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK----NIIKFEGDHN 74 (399)
Q Consensus 21 I~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpK----qL~ifeGgHN 74 (399)
..+.++...+.++.+|+|+++|-.|.... ..+.++|++++.++ .|++-+++|.
T Consensus 215 w~~~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 215 WQERSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HHTTBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HHhCChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 45566777789999999999999997777 99999999999866 7777788885
No 97
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=91.80 E-value=0.29 Score=47.22 Aligned_cols=60 Identities=22% Similarity=0.207 Sum_probs=45.1
Q ss_pred HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCCh-HHHHHHHHHHHH
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRP-QFYFDSINIFFH 90 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rp-qeY~e~V~~FL~ 90 (399)
.+.-|.+|.|||||+.|++|.+....+.++. . +-.++.++| +|+.... ....+.|..||.
T Consensus 144 ~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~-~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 144 FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-I-KITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred hccCCCCCceeEecChhhhhcHHHHHHhhcC-C-CCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 3445789999999999999999988877766 2 334555555 6976544 567888999985
No 98
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=90.95 E-value=0.7 Score=47.88 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=56.0
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC--CCCC--CChHHHHHHHHHHHHH
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG--DHNS--PRPQFYFDSINIFFHN 91 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG--gHNd--~rpqeY~e~V~~FL~k 91 (399)
=+....++++++|+|++-=+.|.+.|++..+.|.++.+..+.++.|+- ||-. .....|...|..||..
T Consensus 296 ~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 296 GDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 356678999999999999999999999999999999999877888864 5743 3445566889999864
No 99
>PRK10162 acetyl esterase; Provisional
Probab=90.91 E-value=0.48 Score=46.24 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=44.5
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCC-CCCC----C---hHHHHHHHHHHHHHhcC
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNSP----R---PQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGg-HNd~----r---pqeY~e~V~~FL~k~Lq 94 (399)
-.|+||++|+.|.+++ +++.+++.++. +.+++.++|. |... . ....++.+..||.+.++
T Consensus 248 lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 248 VPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 4699999999999974 78888766654 5788889996 8432 1 23578889999988764
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=90.73 E-value=0.59 Score=42.53 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=39.5
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCCh-HHHHHHHHHHHH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRP-QFYFDSINIFFH 90 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rp-qeY~e~V~~FL~ 90 (399)
..+|.++|.+++|.+||+..+++|.+..+ .+++.+++ ||.+... -..|..+...|+
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccCCCchHHHHHHhc
Confidence 46888999999999999999999999884 45777765 7976543 224555555443
No 101
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.47 E-value=0.97 Score=46.84 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=48.1
Q ss_pred ChHHHhccCC--CCEEEEEeCCCCeeChHHHHHHHHH-hCCCceEEEecC-CCCC--CChHHHHHHHHHHHHHh
Q 015835 25 NTIKVAKSCF--VPVLFGHAVEDDFINPHHSDRIFEA-YAGDKNIIKFEG-DHNS--PRPQFYFDSINIFFHNV 92 (399)
Q Consensus 25 sPI~~VkkI~--vPILFIHGt~D~fVPpehSerLYEA-akgpKqL~ifeG-gHNd--~rpqeY~e~V~~FL~k~ 92 (399)
.-++.+...+ ||++||||..| -+-..-+.++... .....++++++| |||. ..|+.+-+.|..||+..
T Consensus 292 Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 292 PMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 3456666655 99999999876 4566777777765 444678999987 5864 35666778888888653
No 102
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=89.21 E-value=0.43 Score=50.22 Aligned_cols=73 Identities=22% Similarity=0.383 Sum_probs=60.6
Q ss_pred CChHHHh-----ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CCCCChHHHHHHHHHHHHHhcCCCC
Q 015835 24 LNTIKVA-----KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFHNVLQPPE 97 (399)
Q Consensus 24 VsPI~~V-----kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HNd~rpqeY~e~V~~FL~k~Lq~p~ 97 (399)
++|+.+. .+..+|..|+.|..|+|.++..+.--|+..+|.|.|..++++ |+.. ++...+.+..|+.+.-..+.
T Consensus 314 iDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~-n~~i~esl~~flnrfq~~~~ 392 (507)
T COG4287 314 IDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI-NQFIKESLEPFLNRFQMYPK 392 (507)
T ss_pred hcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh-HHHHHHHHHHHHHHHhcCCC
Confidence 5677777 567899999999999999999999999999999999999997 7764 45577778888876654444
No 103
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=88.73 E-value=0.58 Score=45.04 Aligned_cols=56 Identities=16% Similarity=0.405 Sum_probs=41.1
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhC---CCceEEEecC-CCCCCChHHHHHHHHHHHHH
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYA---GDKNIIKFEG-DHNSPRPQFYFDSINIFFHN 91 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAak---gpKqL~ifeG-gHNd~rpqeY~e~V~~FL~k 91 (399)
..|+|..||+.|++||+.-++.=.+.++ ..+++..++| +|... ++ =++.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~-~~-e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS-PQ-ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc-HH-HHHHHHHHHHH
Confidence 5789999999999999997776655444 3567777889 57654 33 35667778876
No 104
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.81 E-value=2.1 Score=47.52 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=65.4
Q ss_pred CCCCCCCChHH-----HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecC-CCCCCCh-------------
Q 015835 18 KFDITDLNTIK-----VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEG-DHNSPRP------------- 78 (399)
Q Consensus 18 GFdI~DVsPI~-----~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeG-gHNd~rp------------- 78 (399)
||.++.++.-+ .+-.++.|+|||-|..|...++.-.+.+.+..+...+++.+.| +|+...+
T Consensus 283 gypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqse 362 (784)
T KOG3253|consen 283 GYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSE 362 (784)
T ss_pred cccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHH
Confidence 66666666633 3335789999999999999999999999999999999999987 4864211
Q ss_pred --HHHHHHHHHHHHHhcCCCCCCcCCcc
Q 015835 79 --QFYFDSINIFFHNVLQPPEDEVGPTL 104 (399)
Q Consensus 79 --qeY~e~V~~FL~k~Lq~p~d~v~~~~ 104 (399)
....+.|.+|+...+.....--...|
T Consensus 363 Vd~~i~~aI~efvt~~l~c~eghM~~~~ 390 (784)
T KOG3253|consen 363 VDSAIAQAIKEFVTIALNCTEGHMLASY 390 (784)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCccccch
Confidence 12567788888888877665333333
No 105
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.81 E-value=0.84 Score=48.02 Aligned_cols=63 Identities=16% Similarity=0.217 Sum_probs=47.0
Q ss_pred CCEEEEEeCCCCeeChHHHHHHHHHhCC---C--------ceEEEecC-CCCCC----ChHHHHHHHHHHHHHhcCCCC
Q 015835 35 VPVLFGHAVEDDFINPHHSDRIFEAYAG---D--------KNIIKFEG-DHNSP----RPQFYFDSINIFFHNVLQPPE 97 (399)
Q Consensus 35 vPILFIHGt~D~fVPpehSerLYEAakg---p--------KqL~ifeG-gHNd~----rpqeY~e~V~~FL~k~Lq~p~ 97 (399)
--+|+.||..|.+||+..+.+.|+.... . -+|+++|| +|... .+-..+..+.+|+++-..|..
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 4589999999999999999999975443 1 25677799 69653 234578889999986554443
No 106
>PRK04940 hypothetical protein; Provisional
Probab=86.57 E-value=1.9 Score=40.56 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=41.5
Q ss_pred EEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CCCCChHHHHHHHHHHHH
Q 015835 37 VLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFH 90 (399)
Q Consensus 37 ILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HNd~rpqeY~e~V~~FL~ 90 (399)
++++.++.|+++.+.++.+-|..|- ++.+++|| |--..-++|...|..|+.
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~y---~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPYY---EIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccCc---eEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 4999999999999999999886651 26677877 555566789999999985
No 107
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=86.31 E-value=1.2 Score=45.89 Aligned_cols=57 Identities=19% Similarity=0.288 Sum_probs=44.6
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCC---ChHHHHHHHHHHHH
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP---RPQFYFDSINIFFH 90 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~---rpqeY~e~V~~FL~ 90 (399)
-.-.++|+.+++|.+||.+....|-+..+|- ++..++|||... +...|.++|.+=|+
T Consensus 288 dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs-EvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 288 DPSAIIFVAAKNDAYVPRHGVLSLQEIWPGS-EVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCcEEEEEecCceEechhhcchHHHhCCCC-eEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 3456899999999999999999998888764 566689999653 44567787876554
No 108
>PLN00021 chlorophyllase
Probab=85.84 E-value=0.78 Score=45.54 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=35.2
Q ss_pred cCCCCEEEEEeCCCC-----e----eChHHH-HHHHHHhCCCceEEEecC-CCCCC
Q 015835 32 SCFVPVLFGHAVEDD-----F----INPHHS-DRIFEAYAGDKNIIKFEG-DHNSP 76 (399)
Q Consensus 32 kI~vPILFIHGt~D~-----f----VPpehS-erLYEAakgpKqL~ifeG-gHNd~ 76 (399)
++.+|+|+|++..|. + .|.... +++|++|+++|.+.+++| +|++.
T Consensus 187 ~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 187 NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDM 242 (313)
T ss_pred cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCccee
Confidence 367999999999763 3 336655 999999999999888875 69653
No 109
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=85.61 E-value=1.2 Score=49.03 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=34.1
Q ss_pred cC-CCCEEEEEeCCCCeeChHHHHHHHHHhCC----C---ceEEEecCC-CCC
Q 015835 32 SC-FVPVLFGHAVEDDFINPHHSDRIFEAYAG----D---KNIIKFEGD-HNS 75 (399)
Q Consensus 32 kI-~vPILFIHGt~D~fVPpehSerLYEAakg----p---KqL~ifeGg-HNd 75 (399)
++ ..|+||+||+.|.++|..|+-+-|-.... . -.+|.+.++ |++
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 44 68999999999999999999999955442 2 356667776 654
No 110
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=85.46 E-value=2.3 Score=42.86 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=38.0
Q ss_pred ChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCC-ceEEEecCC-CCCC
Q 015835 25 NTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD-KNIIKFEGD-HNSP 76 (399)
Q Consensus 25 sPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgp-KqL~ifeGg-HNd~ 76 (399)
++++.++.+.+|++.++|.+|.-|-...-+.|....+.+ .++|.++|. |...
T Consensus 186 ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 186 STINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred hHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 367788999999999999999999999999999988875 589999996 8654
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=85.22 E-value=1.2 Score=39.34 Aligned_cols=50 Identities=20% Similarity=0.263 Sum_probs=36.8
Q ss_pred CCChHHH-hccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCC-CC
Q 015835 23 DLNTIKV-AKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HN 74 (399)
Q Consensus 23 DVsPI~~-VkkI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGg-HN 74 (399)
.++|+.. --+--.|++|+||+.|.++ .++++++++++. +.++.+++|. |.
T Consensus 154 ~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~ 208 (211)
T PF07859_consen 154 LASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHG 208 (211)
T ss_dssp TTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETT
T ss_pred ccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEE
Confidence 5777766 1122469999999999886 578888877665 4578888985 74
No 112
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=84.14 E-value=2.3 Score=40.39 Aligned_cols=41 Identities=17% Similarity=0.395 Sum_probs=33.9
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEe-cCCCCC
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKF-EGDHNS 75 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~if-eGgHNd 75 (399)
..-|.++++.++|.++++++++.+.++.++ .|+.+ +|||.+
T Consensus 116 lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN 157 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHIN 157 (181)
T ss_pred CCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccc
Confidence 467999999999999999999999988854 45555 678954
No 113
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=83.98 E-value=2.5 Score=46.63 Aligned_cols=73 Identities=16% Similarity=0.318 Sum_probs=55.7
Q ss_pred CCCCChHHHhcc--CCCCEEEEEeCCCCeeChHHHHHHHHHhCC-CceEEEe---cCCCCCCCh----HHHHHHHHHHHH
Q 015835 21 ITDLNTIKVAKS--CFVPVLFGHAVEDDFINPHHSDRIFEAYAG-DKNIIKF---EGDHNSPRP----QFYFDSINIFFH 90 (399)
Q Consensus 21 I~DVsPI~~Vkk--I~vPILFIHGt~D~fVPpehSerLYEAakg-pKqL~if---eGgHNd~rp----qeY~e~V~~FL~ 90 (399)
|..++|++.++- ..-|+||--+++|+-|-|.|+++.+.++.. ....|++ +|||...-+ ..++..+..||.
T Consensus 565 l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~ 644 (648)
T COG1505 565 LLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLL 644 (648)
T ss_pred HHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHH
Confidence 566889998885 468999999999999999999999988876 2333333 578966433 346677888998
Q ss_pred Hhc
Q 015835 91 NVL 93 (399)
Q Consensus 91 k~L 93 (399)
+.|
T Consensus 645 r~L 647 (648)
T COG1505 645 RTL 647 (648)
T ss_pred Hhh
Confidence 876
No 114
>COG4099 Predicted peptidase [General function prediction only]
Probab=83.62 E-value=0.62 Score=47.93 Aligned_cols=58 Identities=24% Similarity=0.344 Sum_probs=39.9
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC-Cc--eEEEe-------cC-CCCCCChHHHH-HHHHHHHHH
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG-DK--NIIKF-------EG-DHNSPRPQFYF-DSINIFFHN 91 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg-pK--qL~if-------eG-gHNd~rpqeY~-e~V~~FL~k 91 (399)
+.|+.|+|+.+|.+||.++++-||+..++ .+ ++..| +| +|++.+...|- ..+.+||-+
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 68999999999999999999999988877 22 22222 34 36665433332 345566644
No 115
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=79.44 E-value=4.2 Score=36.31 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=43.6
Q ss_pred CCCEEEEEeCCCCeeChH---HHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHHh
Q 015835 34 FVPVLFGHAVEDDFINPH---HSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNV 92 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpe---hSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k~ 92 (399)
.+|++++.+..|.+.... ...+..+.+.+.-.++.++|+|+.... +....|.+++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~-~~~~~i~~~I~~~ 228 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLK-PHVAEIAEKIAEW 228 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHS-TTHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecc-hHHHHHHHHHhcc
Confidence 678999999999998888 333455666677789999999988654 5566777776654
No 116
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=78.57 E-value=2.9 Score=40.38 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=47.4
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC-C---ceEEEecC-CCCCC-----ChHHHHHHHHHHHHH
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG-D---KNIIKFEG-DHNSP-----RPQFYFDSINIFFHN 91 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg-p---KqL~ifeG-gHNd~-----rpqeY~e~V~~FL~k 91 (399)
++++|=|=|+.|+|-.+-|.+.-.+.|.+ | |.-++.+| ||+.. +..+++..|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 57777799999999999999999999988 2 56667788 79764 346688889999875
No 117
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=78.32 E-value=2.5 Score=44.45 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=40.5
Q ss_pred ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCC-CCCCChHHHHHHHHHHHHHhc
Q 015835 31 KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGD-HNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 31 kkI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGg-HNd~rpqeY~e~V~~FL~k~L 93 (399)
.++.+|+|.|.|++|.|.|.+..+-|...-...|.+.++.+. |-+. ..-...|..||+..+
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~gy--~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMGY--PQALDEIYKWLEDKL 410 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHHH--HHHHHHHHHHHHHHH
T ss_pred CCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccch--HHHHHHHHHHHHHhc
Confidence 568899999999999999999998887666556666666554 4322 235677888887653
No 118
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=75.20 E-value=4.4 Score=45.43 Aligned_cols=66 Identities=17% Similarity=0.241 Sum_probs=49.5
Q ss_pred hHHHhccC---CCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCCCCCCCh----HHHHHHHHHHHHH
Q 015835 26 TIKVAKSC---FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSPRP----QFYFDSINIFFHN 91 (399)
Q Consensus 26 PI~~VkkI---~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGgHNd~rp----qeY~e~V~~FL~k 91 (399)
....|.+. .--+|++||--|+=|-+.|.-+|-.++.. +-+|.+||..-|..|. ..|..++..||++
T Consensus 791 V~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 791 VAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 34445543 34489999999999999999999977653 5689999997433332 3477889999986
No 119
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=74.28 E-value=2.9 Score=40.05 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=25.8
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG 62 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg 62 (399)
..|++++||+.|.+|.+.+++++.+.+..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 47999999999999999999999877643
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=70.33 E-value=8 Score=37.07 Aligned_cols=65 Identities=15% Similarity=0.221 Sum_probs=43.4
Q ss_pred CChHHHh--ccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCC-CCC--CC-h--HHHHHHHHHHHHH
Q 015835 24 LNTIKVA--KSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGD-HNS--PR-P--QFYFDSINIFFHN 91 (399)
Q Consensus 24 VsPI~~V--kkI~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGg-HNd--~r-p--qeY~e~V~~FL~k 91 (399)
++|+..- .. --|+|++||..|.+++ +++.+.+.+.. +.++..++|. |-. .. + ..-+..|..||..
T Consensus 234 ~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 234 ASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred cCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 5555544 33 5789999999999999 66666655543 5688888986 732 11 1 2245667777763
No 121
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=65.41 E-value=14 Score=39.13 Aligned_cols=71 Identities=20% Similarity=0.170 Sum_probs=47.3
Q ss_pred CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC--CceEEEecCCCCCC--C--------h-HHHHH--HHHHH
Q 015835 24 LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG--DKNIIKFEGDHNSP--R--------P-QFYFD--SINIF 88 (399)
Q Consensus 24 VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg--pKqL~ifeGgHNd~--r--------p-qeY~e--~V~~F 88 (399)
.+....+.++.+|+|++.|=.|.+. ..+.++|++... +++|++=+++|... . + ..+.. .+..|
T Consensus 222 ~~~~~~~~~i~vP~l~~~gw~D~~~--~g~~~~~~~~~~~~~~~lilGpw~H~~~~~~~~~~~~g~~~~~~~~~~~~~~w 299 (550)
T TIGR00976 222 ISLWRDLGGSDVPTLVTGGWYDNHS--RGSIRLFLAVHRGGAQRLVVGPWTHSGLGGRVGDGNYGMAALSWVDEAEQLAF 299 (550)
T ss_pred CchhhHhcCCCCCEEEeCcccCCCC--chHHHHHHHHhhcCCceEEEccCCCCCcccccCCCccCccccccchhhhhHHH
Confidence 4445577789999999999999433 356677776654 46677657888621 0 0 11222 46789
Q ss_pred HHHhcCCC
Q 015835 89 FHNVLQPP 96 (399)
Q Consensus 89 L~k~Lq~p 96 (399)
|..+|+-.
T Consensus 300 fD~~Lkg~ 307 (550)
T TIGR00976 300 FDRHLKGG 307 (550)
T ss_pred HHHHhCCC
Confidence 99999743
No 122
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=63.37 E-value=9.9 Score=36.59 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=33.2
Q ss_pred CCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCce-EEEecCCCCC
Q 015835 22 TDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKN-IIKFEGDHNS 75 (399)
Q Consensus 22 ~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpKq-L~ifeGgHNd 75 (399)
+++++ +++..+++|+||.||+.|.|=.-.+. .=|.. ..+-+ +|+-.++|..
T Consensus 131 e~~Rt-~HL~gl~tPtli~qGtrD~fGtr~~V-a~y~l-s~~iev~wl~~adHDL 182 (213)
T COG3571 131 EQLRT-EHLTGLKTPTLITQGTRDEFGTRDEV-AGYAL-SDPIEVVWLEDADHDL 182 (213)
T ss_pred ccchh-hhccCCCCCeEEeecccccccCHHHH-Hhhhc-CCceEEEEeccCcccc
Confidence 34443 56777899999999999999877766 22322 22444 4444556853
No 123
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.82 E-value=17 Score=37.44 Aligned_cols=55 Identities=20% Similarity=0.313 Sum_probs=41.1
Q ss_pred EEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCC---ChHHHHHHHHHHHHHh
Q 015835 37 VLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSP---RPQFYFDSINIFFHNV 92 (399)
Q Consensus 37 ILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~---rpqeY~e~V~~FL~k~ 92 (399)
|+|+.+++|.+||-.-...|.++.+| .++-.++|||... ....+..+|.+-|.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEeecCceeeeehhchHHHHHHHHHHHhh
Confidence 78999999999999666666666665 4566667999654 3456888888877654
No 124
>COG2868 Predicted ribosomal protein [Translation, ribosomal structure and biogenesis]
Probab=54.66 E-value=20 Score=31.65 Aligned_cols=42 Identities=29% Similarity=0.608 Sum_probs=38.0
Q ss_pred CCCceeEEeccccCCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC
Q 015835 208 DDDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLEMRHPEV 252 (399)
Q Consensus 208 dd~~yvey~~d~~~~~p~~~e~e~rm~m~a~~~slkd~e~~~~~~ 252 (399)
+.+-|.++.+++ ||.+.-++-+-++|.++-+||.|+-++|+-
T Consensus 60 ~~~Gyl~~~ip~---~~~~~~~~~q~l~e~~~~~l~~La~~Y~~~ 101 (109)
T COG2868 60 VEGGYLYFEIPN---LPDNNKEEAQLLLESMILGLKTLAESYPEY 101 (109)
T ss_pred CCCeeEEEEcCC---CCcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 556699999987 899999999999999999999999999864
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=53.10 E-value=33 Score=32.92 Aligned_cols=60 Identities=13% Similarity=-0.004 Sum_probs=38.8
Q ss_pred CChHHHhccCC-CCEEEEEeCCCCeeChHHHHHHHHHhC-CCceEEEecCCCCCC-ChHHHHHHHHHHHH
Q 015835 24 LNTIKVAKSCF-VPVLFGHAVEDDFINPHHSDRIFEAYA-GDKNIIKFEGDHNSP-RPQFYFDSINIFFH 90 (399)
Q Consensus 24 VsPI~~VkkI~-vPILFIHGt~D~fVPpehSerLYEAak-gpKqL~ifeGgHNd~-rpqeY~e~V~~FL~ 90 (399)
++++..++++. .|++.|.|.+++=.++- ... ..-+++.++||||.. +.....+.|..-|+
T Consensus 128 ~~~~pei~~l~~~~v~CiyG~~E~d~~cp-------~l~~~~~~~i~lpGgHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 128 YPVIPEIAKLPPAPVQCIYGEDEDDSLCP-------SLRQPGVEVIALPGGHHFDGDYDALAKRILDALK 190 (192)
T ss_pred CCchHHHHhCCCCeEEEEEcCCCCCCcCc-------cccCCCcEEEEcCCCcCCCCCHHHHHHHHHHHHh
Confidence 46788888874 69999999988753322 122 246788899997654 44445555554443
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.78 E-value=25 Score=35.53 Aligned_cols=64 Identities=19% Similarity=0.255 Sum_probs=47.2
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC-C-ceEEEec--C--CCCCC-Ch--HHHHHHHHHHH
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG-D-KNIIKFE--G--DHNSP-RP--QFYFDSINIFF 89 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg-p-KqL~ife--G--gHNd~-rp--qeY~e~V~~FL 89 (399)
-.+..+.+.+||+|+-..+|.-+|+.-.+.+.+.+.. + +.+++-+ | ||+.- |. +..|+.+..||
T Consensus 208 ~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 208 YRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 4456778999999999999999999999999998887 3 5555543 3 58763 32 44555555544
No 127
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=51.56 E-value=27 Score=36.69 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=51.8
Q ss_pred hHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCC--ceEEEecC-CCCCC-----ChHHHHHHHHHHHHHhc
Q 015835 26 TIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD--KNIIKFEG-DHNSP-----RPQFYFDSINIFFHNVL 93 (399)
Q Consensus 26 PI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgp--KqL~ifeG-gHNd~-----rpqeY~e~V~~FL~k~L 93 (399)
|.-.+.++.+|+.+.+|..|.++-++..++++...... +.++.++. .|.+. ..+..++.|.++++...
T Consensus 324 P~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 324 PEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred CCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 44455667899999999999999999999998777663 44555666 78653 34667788888887655
No 128
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=49.80 E-value=56 Score=34.31 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=47.5
Q ss_pred HhCCCCCCCChHHHhccCCCCEEEEEeCC-------CCeeChHHH--HHHHH-----HhCCCceEEEecC-CCCCCChHH
Q 015835 16 KAKFDITDLNTIKVAKSCFVPVLFGHAVE-------DDFINPHHS--DRIFE-----AYAGDKNIIKFEG-DHNSPRPQF 80 (399)
Q Consensus 16 rAGFdI~DVsPI~~VkkI~vPILFIHGt~-------D~fVPpehS--erLYE-----AakgpKqL~ifeG-gHNd~rpqe 80 (399)
.+|-+++ +.+.-+++.||-+|||+.+ |.+++++.+ ..+.+ .+++.|..+--.. .|+..-..+
T Consensus 275 l~gWnid---S~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~lA~~~l~~~~~~~~~~~Ki~i~~~~l~H~~~L~~~ 351 (365)
T PF05677_consen 275 LLGWNID---SAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENCLAAAFLDPPTAEKLSGKKIPIGERLLLHNEPLDDE 351 (365)
T ss_pred HhccCCC---chhhhccCCCCeEEEeccccchhhcccccCCcchhhHHHhcCCcccccccccceecccccccccccCChH
Confidence 5577666 6677778889999999974 666766643 22322 1223333333233 487777777
Q ss_pred HHHHHHHHHHHhc
Q 015835 81 YFDSINIFFHNVL 93 (399)
Q Consensus 81 Y~e~V~~FL~k~L 93 (399)
.++.|..-+.++|
T Consensus 352 ~~~~la~~I~~~~ 364 (365)
T PF05677_consen 352 TIQALAEHILDHF 364 (365)
T ss_pred HHHHHHHHHHhhc
Confidence 7777777776655
No 129
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=49.42 E-value=31 Score=33.17 Aligned_cols=61 Identities=18% Similarity=0.202 Sum_probs=35.9
Q ss_pred CCCEEEEEeCCC-CeeChHHHHHHHHHhCC-CceEEEec-CCCCCCC-------hHHHHHHHHHHHHHhcC
Q 015835 34 FVPVLFGHAVED-DFINPHHSDRIFEAYAG-DKNIIKFE-GDHNSPR-------PQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 34 ~vPILFIHGt~D-~fVPpehSerLYEAakg-pKqL~ife-GgHNd~r-------pqeY~e~V~~FL~k~Lq 94 (399)
+.|++||||... ....+......+.+.+= ..+++-+. |...... ..++...|..|+.+++.
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHH
Confidence 469999999998 76777766666666541 34577764 4333211 23466889999988774
No 130
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=49.35 E-value=51 Score=33.74 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhCCCCCC-------------------CChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCc
Q 015835 4 FAIQYMRKAIQKKAKFDITD-------------------LNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDK 64 (399)
Q Consensus 4 ~aL~lIr~~IKkrAGFdI~D-------------------VsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgpK 64 (399)
+++..+.+.+.+..||.+.+ ...|+.+.+-++|+|++.|.+|-+|=-+-+....+.+.+-+
T Consensus 163 ~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~ 242 (297)
T PF06342_consen 163 FIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLD 242 (297)
T ss_pred HHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCcc
Confidence 34445555556666666554 44556666778999999999999999888888887776655
Q ss_pred eEEE
Q 015835 65 NIIK 68 (399)
Q Consensus 65 qL~i 68 (399)
.+.+
T Consensus 243 Hf~~ 246 (297)
T PF06342_consen 243 HFNI 246 (297)
T ss_pred ceee
Confidence 5554
No 131
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=48.81 E-value=31 Score=35.76 Aligned_cols=56 Identities=7% Similarity=0.153 Sum_probs=36.9
Q ss_pred CCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEecCCCCCCChHHHHHHHHHHHHHhcC
Q 015835 35 VPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKFEGDHNSPRPQFYFDSINIFFHNVLQ 94 (399)
Q Consensus 35 vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~ifeGgHNd~rpqeY~e~V~~FL~k~Lq 94 (399)
+.++|-+|+.|..+ +...++|++.+.. +-.+..++|||+-. .+...+.+.|.-.++
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~~---~Wr~~L~~~L~~l~~ 408 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGGHDAL---CWRGGLIQGLIDLWQ 408 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCCcCHH---HHHHHHHHHHHHHhc
Confidence 45777799998765 5677888887765 45777789999754 233445555544443
No 132
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=42.82 E-value=18 Score=39.79 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=23.5
Q ss_pred HhccCCCCEEEEEeCCCCeeChHHH
Q 015835 29 VAKSCFVPVLFGHAVEDDFINPHHS 53 (399)
Q Consensus 29 ~VkkI~vPILFIHGt~D~fVPpehS 53 (399)
.+++|++|++++.|..|.+.||+|+
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~Qa 316 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQA 316 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHh
Confidence 4678999999999999999999999
No 133
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=41.45 E-value=1.2e+02 Score=29.30 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCChHHHhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCCC-ceEEEec
Q 015835 4 FAIQYMRKAIQKKAKFDITDLNTIKVAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAGD-KNIIKFE 70 (399)
Q Consensus 4 ~aL~lIr~~IKkrAGFdI~DVsPI~~VkkI~vPILFIHGt~D~fVPpehSerLYEAakgp-KqL~ife 70 (399)
-+|.+++.-++....-+ +-.-++........+.|+.|..|.-||.++-+.|-+.+++. .++.+.+
T Consensus 193 qaL~Ma~~Em~~I~~~d--~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~ 258 (266)
T PF10230_consen 193 QALYMARDEMREIREDD--NDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE 258 (266)
T ss_pred HHHHHHHHHHHHccCcc--hHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec
Confidence 34555555555444333 33334444333789999999999999999999999999963 3444444
No 134
>PF13887 MRF_C1: Myelin gene regulatory factor -C-terminal domain 1
Probab=36.38 E-value=22 Score=26.00 Aligned_cols=12 Identities=50% Similarity=0.764 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q 015835 229 EEERMFMEAVIM 240 (399)
Q Consensus 229 ~e~rm~m~a~~~ 240 (399)
+++|+|||.|..
T Consensus 4 dk~rifmEnV~A 15 (36)
T PF13887_consen 4 DKERIFMENVGA 15 (36)
T ss_pred cHHHHHHHHHHH
Confidence 579999998864
No 135
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=35.34 E-value=19 Score=37.66 Aligned_cols=49 Identities=27% Similarity=0.257 Sum_probs=39.2
Q ss_pred HHhccCCCCEEEEEeCCCCeeChH-HHHHHHHHhCCC-ceEEEecCC-CCCC
Q 015835 28 KVAKSCFVPVLFGHAVEDDFINPH-HSDRIFEAYAGD-KNIIKFEGD-HNSP 76 (399)
Q Consensus 28 ~~VkkI~vPILFIHGt~D~fVPpe-hSerLYEAakgp-KqL~ifeGg-HNd~ 76 (399)
.-+.++++|++++-|..|.|.|+. ...+.+...+++ |.+.+++|+ |.+.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sf 296 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSF 296 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccc
Confidence 345678999999999999999998 456677777776 788888875 9763
No 136
>PRK14285 chaperone protein DnaJ; Provisional
Probab=31.41 E-value=45 Score=34.13 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCceeEEeccccCCCCCCHHHHHHHHHHHHHHhhhhhc
Q 015835 209 DDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLE 246 (399)
Q Consensus 209 d~~yvey~~d~~~~~p~~~e~e~rm~m~a~~~slkd~e 246 (399)
-|.||++++. ||....+++|.+++.+++.+||+.
T Consensus 325 GDL~V~~~v~----~P~~l~~~q~~~l~~l~~~~~~~~ 358 (365)
T PRK14285 325 GNLILIIKIK----TPKNLNSNAIKLLENLSKELKDID 358 (365)
T ss_pred CCEEEEEEEE----CCCCCCHHHHHHHHHHHHHhcccc
Confidence 6788988875 788899999999999999999985
No 137
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.18 E-value=1.2e+02 Score=31.61 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=48.9
Q ss_pred CCCCEEEEEeCCCCeeChHHHHHHHHHhCCC----ceEEEecCCC---CCCChHHHHHHHHHHHHHhcCCCCCC
Q 015835 33 CFVPVLFGHAVEDDFINPHHSDRIFEAYAGD----KNIIKFEGDH---NSPRPQFYFDSINIFFHNVLQPPEDE 99 (399)
Q Consensus 33 I~vPILFIHGt~D~fVPpehSerLYEAakgp----KqL~ifeGgH---Nd~rpqeY~e~V~~FL~k~Lq~p~d~ 99 (399)
...+.|++-+..|.++|..+.++.-+.-+.. +.+-..++.| ....+..|++....||+.........
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~ 297 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLK 297 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCCc
Confidence 3789999999999999999999985444332 2222224445 45578899999999999987765533
No 138
>PRK14553 hypothetical protein; Provisional
Probab=27.83 E-value=89 Score=26.78 Aligned_cols=42 Identities=29% Similarity=0.619 Sum_probs=35.3
Q ss_pred CCCceeEEeccccCCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC
Q 015835 208 DDDQYVEYQLDDLAGFPSNVEEEERMFMEAVIMSLKDLEMRHPEV 252 (399)
Q Consensus 208 dd~~yvey~~d~~~~~p~~~e~e~rm~m~a~~~slkd~e~~~~~~ 252 (399)
.++-|+.+.+. +++.+..+.-..||+.++-.||+++-++|+.
T Consensus 59 ~~~G~l~~~l~---~~~~~~~~~~q~ll~~~~~gl~~i~~~Yp~~ 100 (108)
T PRK14553 59 SEDGYLEFELP---DFDEENNEKLQLLLETLELGLKSLEFQYPKY 100 (108)
T ss_pred ccCCEEEEEec---CCCccccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 37789999887 5666667778999999999999999999864
No 139
>PF15603 Imm45: Immunity protein 45
Probab=25.75 E-value=1.1e+02 Score=25.70 Aligned_cols=61 Identities=28% Similarity=0.427 Sum_probs=41.9
Q ss_pred CcceeeecCCCCC---CCCCCCCccCCCc-eeEEeccccC--CCCCCH----HHHHHHHHHHHHHhhhhhcc
Q 015835 186 SNMISFELSDGHP---YGPHVPTAMDDDQ-YVEYQLDDLA--GFPSNV----EEEERMFMEAVIMSLKDLEM 247 (399)
Q Consensus 186 s~~~~~~~~~g~~---~~~~~~~~~dd~~-yvey~~d~~~--~~p~~~----e~e~rm~m~a~~~slkd~e~ 247 (399)
++-|.|+|.||+- +|-.|-...|++- ||-| +|++. +-|++- +.|.-.+++||.+.+.+.-+
T Consensus 7 ~s~i~~el~~G~~~~~~GE~l~~~~~~~~~Fvvy-~~si~~We~P~e~~~it~~e~q~II~aI~~~~~~~~~ 77 (82)
T PF15603_consen 7 RSYITFELEEGARRKAQGEMLLTGNDNDGDFVVY-KDSIKNWEPPHENEPITIAERQKIIEAIEKYFSERGM 77 (82)
T ss_pred CCceEEEecCCEEEEEeeeEEEeccCCCcCEEEE-ccccccccCCCCCcccCHHHHHHHHHHHHHHHhcCce
Confidence 5578999999943 6766666555554 8888 57777 234443 25666788999888776544
No 140
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=24.81 E-value=88 Score=30.75 Aligned_cols=56 Identities=16% Similarity=0.024 Sum_probs=43.3
Q ss_pred CCCEEEEEeC------CCCeeChHHHHHHHHHhCC-Cc--eEEEecCC---CCCC-ChHHHHHHHHHHH
Q 015835 34 FVPVLFGHAV------EDDFINPHHSDRIFEAYAG-DK--NIIKFEGD---HNSP-RPQFYFDSINIFF 89 (399)
Q Consensus 34 ~vPILFIHGt------~D~fVPpehSerLYEAakg-pK--qL~ifeGg---HNd~-rpqeY~e~V~~FL 89 (399)
.+-+|-|.|. .|.+||...++.|....++ .+ +-++|.|. |-.. ......+.|..||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence 5789999999 9999999999999999988 34 33445662 7554 4567888899998
No 141
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=23.04 E-value=95 Score=33.01 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCCEEEEEeCCCCeeChHHHHHHHHHhCC---CceEEEe
Q 015835 34 FVPVLFGHAVEDDFINPHHSDRIFEAYAG---DKNIIKF 69 (399)
Q Consensus 34 ~vPILFIHGt~D~fVPpehSerLYEAakg---pKqL~if 69 (399)
++=.+..|+..|+++|.++=++||+.++. ..+|.++
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 35567789999999999999999988776 5678777
No 142
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=22.25 E-value=1.9e+02 Score=33.23 Aligned_cols=61 Identities=8% Similarity=-0.092 Sum_probs=41.6
Q ss_pred cCCCCEEEEEeCCCCeeChHHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHHhc
Q 015835 32 SCFVPVLFGHAVEDDFINPHHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHNVL 93 (399)
Q Consensus 32 kI~vPILFIHGt~D~fVPpehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k~L 93 (399)
...+|++++.|..|..++.......-+.+ +.-.++.++|+|........+..+...|.+.+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~l 1294 (1296)
T PRK10252 1234 PFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRATL 1294 (1296)
T ss_pred cccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHHh
Confidence 45689999999999776655444332333 66677888999987654455677777766554
No 143
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=21.98 E-value=1.8e+02 Score=29.95 Aligned_cols=91 Identities=18% Similarity=0.186 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhCCCCCCC-ChHH--HhccCCCCEEEEEeCCCCeeChHHHHHHHHHhCC--CceEEEecC-CCCCC--
Q 015835 5 AIQYMRKAIQKKAKFDITDL-NTIK--VAKSCFVPVLFGHAVEDDFINPHHSDRIFEAYAG--DKNIIKFEG-DHNSP-- 76 (399)
Q Consensus 5 aL~lIr~~IKkrAGFdI~DV-sPI~--~VkkI~vPILFIHGt~D~fVPpehSerLYEAakg--pKqL~ifeG-gHNd~-- 76 (399)
++..++.-.+.++|+.++-. -|+. ....++.|+|||+.+. |--..+-.++.+.+.. ...++++.| +|.+.
T Consensus 242 a~~~l~~d~r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD 319 (379)
T PF03403_consen 242 ALQALRQDTRFKAGILLDPWMFPLGDEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSD 319 (379)
T ss_dssp HHHHHHH-TT--EEEEES---TTS-GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSG
T ss_pred HHHHHhhccCcceEEEeCCcccCCCcccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcch
Confidence 34445555556666655431 1322 2256899999999875 5444444444443332 456777888 48431
Q ss_pred -------------------Ch----HHHHHHHHHHHHHhcCCCC
Q 015835 77 -------------------RP----QFYFDSINIFFHNVLQPPE 97 (399)
Q Consensus 77 -------------------rp----qeY~e~V~~FL~k~Lq~p~ 97 (399)
++ ..+.+.+.+||+++|....
T Consensus 320 ~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~~~ 363 (379)
T PF03403_consen 320 FPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGLHK 363 (379)
T ss_dssp GGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT--S
T ss_pred hhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 11 1245668899999987655
No 144
>smart00726 UIM Ubiquitin-interacting motif. Present in proteasome subunit S5a and other ubiquitin-associated proteins.
Probab=21.61 E-value=62 Score=21.77 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhhhhhcccC
Q 015835 230 EERMFMEAVIMSLKDLEMRH 249 (399)
Q Consensus 230 e~rm~m~a~~~slkd~e~~~ 249 (399)
|+-+|..||-+||++-+-+.
T Consensus 2 EDe~Lq~Ai~lSl~e~e~~~ 21 (26)
T smart00726 2 EDEDLQLALELSLQEAEESX 21 (26)
T ss_pred hHHHHHHHHHHhHHHhhhcc
Confidence 67789999999999877554
No 145
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=20.41 E-value=4.8e+02 Score=23.64 Aligned_cols=64 Identities=9% Similarity=0.079 Sum_probs=34.8
Q ss_pred HHHhccCCCCEEEEEeCCCC---eeCh-------HHHHHHHHHhCCCceEEEecCCCCCCChHHHHHHHHHHHHH
Q 015835 27 IKVAKSCFVPVLFGHAVEDD---FINP-------HHSDRIFEAYAGDKNIIKFEGDHNSPRPQFYFDSINIFFHN 91 (399)
Q Consensus 27 I~~VkkI~vPILFIHGt~D~---fVPp-------ehSerLYEAakgpKqL~ifeGgHNd~rpqeY~e~V~~FL~k 91 (399)
++.+.+..+|++++....+. .|-. ..++.|.+..+|.+++.++.|... .....-++...+++.+
T Consensus 75 i~~~~~~~ipvv~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~~~i~~i~g~~~-~~~~~R~~g~~~~~~~ 148 (271)
T cd06321 75 VKRAQAAGIVVVAVDVAAEGADATVTTDNVQAGEISCQYLADRLGGKGNVAILNGPPV-SAVLDRVAGCKAALAK 148 (271)
T ss_pred HHHHHHCCCeEEEecCCCCCccceeeechHHHHHHHHHHHHHHhCCCceEEEEeCCCC-chHHHHHHHHHHHHHh
Confidence 45555567899999764433 2322 334455566667788888876432 1122223444444443
Done!